[mpich-discuss] mpich2&open64 shared object compilation bug&fix

Anthony Chan chan at mcs.anl.gov
Sat Sep 8 11:25:27 CDT 2012 

Did you try configuring with gcc and openf95 ? i.e.

./configure CC=gcc CXX=g++ F77=openf95 FC=openf95 <other options> --prefix=...

mpich2 configre does not take variable F95.


----- Original Message -----
> for bash:
> export CC=opencc
> export CXX=openCC
> export FC=openf95
> export F77=openf95
> export F95=openf95
> (assuming they are on PATH)
> mpich2 seems to pick these up nicely.
> 
> I am not sure if this specific problem is related to mpich2, I am in
> contact with some open64 developers. I will send an update when I have
> more information.
> 
> 
> On Fri, 7 Sep 2012, Anthony Chan wrote:
> 
> >
> > I am not familiar with Open64 compilers, what would you use
> > to set CC, CXX, F77 and FC during mpich2 configure ?
> >
> > ----- Original Message -----
> >> I tried 1.5rc1 and there seems to be other problems... I have no
> >> idea
> >> what
> >> is this about... configured with: --enable-fast=O2 --enable-shared
> >> --enable-mpe --with-pmi=slurm --with-pm=no
> >> Just as a side note, same configure options work fine with GCC
> >> 4.7.1,
> >> but
> >> that doesnt say much about who to blame :)
> >>
> >>
> >> Making all in .
> >> make[2]: Entering directory `/home/eyurtese/temp/mpich2-1.5rc1'
> >> CC src/binding/f90/create_f90_real.lo
> >> src/binding/f90/create_f90_real.c: In function
> >> 'PMPI_Type_create_f90_real':
> >> src/binding/f90/create_f90_real.c:73: error: expected expression
> >> before
> >> ',' token
> >> src/binding/f90/create_f90_real.c:74: warning: braces around scalar
> >> initializer
> >> src/binding/f90/create_f90_real.c:74: warning: (near initialization
> >> for
> >> 'f90_real_model[0].dtype')
> >> src/binding/f90/create_f90_real.c:74: error: expected expression
> >> before
> >> ',' token
> >> src/binding/f90/create_f90_real.c:74: warning: excess elements in
> >> scalar
> >> initializer
> >> src/binding/f90/create_f90_real.c:74: warning: (near initialization
> >> for
> >> 'f90_real_model[0].dtype')
> >> make[2]: *** [src/binding/f90/create_f90_real.lo] Error 1
> >> make[2]: Leaving directory `/home/eyurtese/temp/mpich2-1.5rc1'
> >> make[1]: *** [all-recursive] Error 1
> >> make[1]: Leaving directory `/home/eyurtese/temp/mpich2-1.5rc1'
> >> make: *** [all] Error 2
> >>
> >>
> >> On Fri, 7 Sep 2012, Evren Yurtesen IB wrote:
> >>
> >>>
> >>> On Thu, 6 Sep 2012, Pavan Balaji wrote:
> >>>
> >>>>
> >>>> Your patch below is to configure (not configure.in) which is
> >>>> auto-generated. The first step I'd recommend is to try out
> >>>> mpich2-1.5rc1.
> >>>> That uses libtool for shared library support. That'll at least
> >>>> confirm
> >>>> whether libtool supports open64 or not. If it doesn't, then a
> >>>> patch
> >>>> would
> >>>> be required for libtool.
> >>>
> >>> Yes, I realized the configure.in later. My apologies, I am not
> >>> very
> >>> familiar
> >>> with the configure system. Please see the attached diffs, what do
> >>> you think
> >>> about them?
> >>>
> >>> I will check 1.5 next.
> >>>
> >>> Thanks,
> >>> Evren
> >>>
> >>>> -- Pavan
> >>>>
> >>>> On 09/06/2012 05:47 PM, Evren Yurtesen IB wrote:
> >>>>> Hmm, I am not quite sure? the configure.in file contains the
> >>>>> information
> >>>>> which should be changed?
> >>>>> http://trac.mcs.anl.gov/projects/mpich2/browser/mpich2/branches/release/mpich2-1.4.x/configure.in
> >>>>>
> >>>>> On Thu, 6 Sep 2012, Pavan Balaji wrote:
> >>>>>
> >>>>>> Hello,
> >>>>>>
> >>>>>> It looks like this patch needs to go into libtool, rather than
> >>>>>> in
> >>>>>> MPICH.
> >>>>>> We
> >>>>>> can maintain a patch to libtool within mpich (at least till
> >>>>>> libtool
> >>>>>> upstream
> >>>>>> integrates it), if you can provide us with one.
> >>>>>>
> >>>>>> -- Pavan
> >>>>>>
> >>>>>> On 09/06/2012 05:24 PM, Evren Yurtesen IB wrote:
> >>>>>>> I was trying to compile mpich2 1.4.1p1 using open64 and oddly
> >>>>>>> it
> >>>>>>> kept
> >>>>>>> failing with the following configure options...
> >>>>>>>
> >>>>>>> --enable-fast=O2 --enable-shared --enable-mpe --with-pmi=slurm
> >>>>>>> --with-pm=none
> >>>>>>>
> >>>>>>> I have googled this and found the following forum post:
> >>>>>>> http://devgurus.amd.com/thread/146210
> >>>>>>>
> >>>>>>> Where the exact error message which I was getting was
> >>>>>>> mentioned:
> >>>>>>>     make[4]: Entering directory
> >>>>>>> `/home2/ach/soft/wrfipkd/mpich2-1.3.1/src/binding/f90'
> >>>>>>>      FC mpi.f90
> >>>>>>> make[4]: *** [mpi.lo] Error 1
> >>>>>>>
> >>>>>>>
> >>>>>>> I have modified the configure script and managed to finish
> >>>>>>> installation.
> >>>>>>> (diff below). Can this fix be part of mpich2?
> >>>>>>>
> >>>>>>>
> >>>>>>>
> >>>>>>> --- configure.orig 2012-09-07 00:45:10.571555205 +0300
> >>>>>>> +++ configure 2012-09-07 00:59:28.956554973 +0300
> >>>>>>> @@ -16739,6 +16739,10 @@
> >>>>>>>         # Try to use the compiler name
> >>>>>>>         if test "$FC" = "ifort" -o "$FC" = "ifc" ; then
> >>>>>>>             pac_cv_fc_vendor=intel
> >>>>>>> + elif test "$FC" = "openf90" ; then
> >>>>>>> + pac_cv_fc_vendor=open64
> >>>>>>> + elif test "$FC" = "openf95" ; then
> >>>>>>> + pac_cv_fc_vendor=open64
> >>>>>>>         elif test "$FC" = "pgf90" ; then
> >>>>>>>             pac_cv_fc_vendor=pgi
> >>>>>>>         elif test "$FC" = "xlf90" -o "$FC" = "xlf90_r" ; then
> >>>>>>> @@ -16785,6 +16789,14 @@
> >>>>>>>                    fi
> >>>>>>>                    ;;
> >>>>>>>
> >>>>>>> + open64)
> >>>>>>> + # open64 implements the GNU options
> >>>>>>> + FC_SHL="$FC -shared -fPIC"
> >>>>>>> + if test "$enable_rpath" = yes ; then
> >>>>>>> + FC_LINKPATH_SHL="-Wl,-rpath -Wl,"
> >>>>>>> + fi
> >>>>>>> + ;;
> >>>>>>> +
> >>>>>>>                    pgi)
> >>>>>>>                    # Portland Group implements the GNU options
> >>>>>>>                    FC_SHL="$FC -shared -fPIC"
> >>>>>>>
> >>>>>>>
> >>>>>>>
> >>>>>>>
> >>>>>>>
> >>>>>>>
> >>>>>>>
> >>>>>>> Thanks,
> >>>>>>> Evren
> >>>>>>>
> >>>>>>> PS. I created a ticket as well:
> >>>>>>> https://trac.mcs.anl.gov/projects/mpich2/ticket/1690
> >>>>>>> _______________________________________________
> >>>>>>> mpich-discuss mailing list mpich-discuss at mcs.anl.gov
> >>>>>>> To manage subscription options or unsubscribe:
> >>>>>>> https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> >>>>>>>
> >>>>>>
> >>>>>> --
> >>>>>> Pavan Balaji
> >>>>>> http://www.mcs.anl.gov/~balaji
> >>>>>>
> >>>>>>
> >>>>
> >>>> --
> >>>> Pavan Balaji
> >>>> http://www.mcs.anl.gov/~balaji
> >>>>
> >>>
> >> _______________________________________________
> >> mpich-discuss mailing list mpich-discuss at mcs.anl.gov
> >> To manage subscription options or unsubscribe:
> >> https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> > _______________________________________________
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> >
> >

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