[mpich-discuss] mpich-discuss Digest, Vol 40, Issue 46 How should I run a source code in C with MPICH2

Pradheep Kumar pradconf at gmail.com
Tue Jan 31 23:07:22 CST 2012


Hi All,
I have installed MPICH2 on Fedora 13. I need to profile a C program on
MPICH2. Kindly let me know how to do the same.

Pradheep

On Tue, Jan 31, 2012 at 11:51 PM, <mpich-discuss-request at mcs.anl.gov> wrote:

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> Today's Topics:
>
>   1. Re:  References for FORTRAN (Gustavo Correa)
>   2.  MPICH2 installation failure (Dute?s)
>
>
> ----------------------------------------------------------------------
>
> Message: 1
> Date: Tue, 31 Jan 2012 13:19:24 -0500
> From: Gustavo Correa <gus at ldeo.columbia.edu>
> Subject: Re: [mpich-discuss] References for FORTRAN
> To: Mpich-Discuss <mpich-discuss at mcs.anl.gov>
> Message-ID: <FA60ADE2-C0A0-46E4-9A70-779272BE3A76 at ldeo.columbia.edu>
> Content-Type: text/plain; charset=us-ascii
>
> Hi
>
> Here are some references in MPI+Fortran.
>
> 1) The LLNL MPI tutorial has some [light weight] MPI examples in Fortran:
> https://computing.llnl.gov/tutorials/mpi/
>
> 2) NCCS tutorials & references:
>
> http://www.nccs.gov/user-support/training-education/hpcparallel-computing-links/
>
> http://www.nccs.gov/user-support/training-education/hpcparallel-computing-links/mpi-examples
> An early version in Fortran of Peter Pacheco's book:
> ladon.iqfr.csic.es/docs/MPI_ug_in_FORTRAN.pdf
>
> 3) Matrix multiplication:
>
> http://www.mcs.anl.gov/research/projects/mpi/usingmpi/examples/simplempi/main.htm
>
> http://www.mcs.anl.gov/research/projects/mpi/usingmpi/examples/simplempi/f90/matmat_f90.htm
>
> 4) 2D Diffusion PDE solved by the Jacobi method [illustrates the use of
> cartesian
> domain decomposition and PDE solver in MPI+Fortran]:
>  http://beige.ucs.indiana.edu/I590/node71.html
>
> If you want really to go for large codes [my bias is
> ocean/atmosphereclimate]
> there are several which are publically available, mostly written in
> Fortran, with a few bits in C:
>
> 5) weather forecast:
> http://www.wrf-model.org/index.php
>
> 6) coupled climate model:
> http://www.cesm.ucar.edu/
>
> 7) ocean general circulation and regional models:
> http://mitgcm.org/
> http://www.gfdl.noaa.gov/fms
> http://www.gfdl.noaa.gov/fms
>
> 8) molecular dynamics:
> http://www.vasp.at/
> http://ambermd.org/
>
> 9) NAS parallel benchmarks:
> http://www.nas.nasa.gov/publications/npb.html
>
>
> I hope this helps.
> Gus Correa
>
>
>
>
> On Jan 31, 2012, at 10:16 AM, Anthony Chan wrote:
>
> >
> > Try doing a google search of "MPI Fortran tutorial"....
> > MPI is a communication library, so you can do numerical
> > intensive calculation between communications.
> >
> > A.Chan
> >
> > ----- Original Message -----
> >> Dear all,
> >>
> >> Can someone give me good references to exploit MPICH using Fortran
> >> programs ? A tutorial or an example of a calculation-intensive program
> >> would be appreciated.
> >>
> >> Thanks,
> >> Jose
> >>
> >> _______________________________________________
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>
> ------------------------------
>
> Message: 2
> Date: Tue, 31 Jan 2012 18:05:54 +0000
> From: Dute?s, Paul <p.m.duteis at cranfield.ac.uk>
> Subject: [mpich-discuss] MPICH2 installation failure
> To: "mpich-discuss at mcs.anl.gov" <mpich-discuss at mcs.anl.gov>
> Message-ID:
>        <
> 82495BE8A8646A49968777B0BE261ACB17E24C85 at CCEXCHMBX-2.central.cranfield.ac.uk
> >
>
> Content-Type: text/plain; charset="iso-8859-1"
>
> Good evening,
>
> For some reasons I can't get MPICH2 to install correctly on my Opensuse
> 12.1 system.
> Everything goes smoothly until I try the first following test
>  mpiexec -n 2 ./examples/cpi
> where it says
> ssh: Could not resolve hostname linux-hpws.site: Name or service not known
> and just crashes.
>
> Could you help me with whatever is wrong? I've joined the log files.
>
> Best Regards,
> Paul Dute?s
>
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-- 
-- 
Regards,

K.Pradheep Kumar
mobile:  +919003079697
email:    pradconf at gmail.com
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