[mpich-discuss] mpich2-1.3.2p1 compile error

[Anthony Chan]

The -fvisibility=hidden is just a warning.  The problem seems to be pgcc does
not like certain construct in topology.c.  I think you could either follow what
Dave said : Try configuring with the following argument:

"--without-hydra-bindlib" or possibly "--with-hydra-bindlib=plpa"

or use another C compiler to compile 1.3.2p1.  If you want to use
gcc/g++/pgf77/pgf90 to compile mpich2, you probably need something
newer than mpich2 1.4rc2, see 
http://trac.mcs.anl.gov/projects/mpich2/ticket/1476

A.Chan

----- Original Message -----
> Anthony,
> 
> The config.log attached.
> 
> 
> 
> Wei Huang
> huangwei at ucar.edu
> VETS/CISL
> National Center for Atmospheric Research
> P.O. Box 3000 (1850 Table Mesa Dr.)
> Boulder, CO 80307-3000 USA
> (303) 497-8924
> 
> 
> 
> 
> 
> On May 4, 2011, at 11:29 AM, Anthony Chan wrote:
> 
> >
> > Your configure output shows that hwloc added -fvisibility=hidden to
> > CFLAGS
> > and that causes the make failure. Could you send us this file
> >
> > src/pm/hydra/tools/bind/hwloc/hwloc/config.log
> >
> > in your build directory ?
> >
> > A.Chan
> >
> > ----- Original Message -----
> >> Anthony,
> >>
> >> Probably line:
> >> PATH: /neem2/huangwei/apps/mpich2-1.4rc2/bin
> >> caused the confusion, but it is the log file for 1.3.2p1.
> >> (As I tried 1.4rc2 before and put that line into my path.)
> >>
> >> Attached are two files of the configure and make output
> >> (saved to files).
> >>
> >> Thanks,
> >>
> >> Wei Huang
> >> huangwei at ucar.edu
> >> VETS/CISL
> >> National Center for Atmospheric Research
> >> P.O. Box 3000 (1850 Table Mesa Dr.)
> >> Boulder, CO 80307-3000 USA
> >> (303) 497-8924
> >>
> >>
> >>
> >>
> >>
> >>
> >>
> >> On May 4, 2011, at 10:43 AM, Anthony Chan wrote:
> >>
> >>>
> >>> The config.log you sent is from mpich2-1.4rc2 not mpich2-1.3.2p1
> >>> that you originally reported to have problem. Also pgcc does not
> >>> seem
> >>> to have option -fvisibility=hidden which AFAIK is a gcc option...
> >>> Need your configure and make outputs to find out what's wrong.
> >>>
> >>> ----- Original Message -----
> >>>> config.log which is generated automatically by configure isn't
> >>>> what
> >>>> I need yet. We need the configure and make outputs as shown
> >>>> on your screen, see MPICH2's top-level README file for more
> >>>> details.
> >>>>
> >>>> ----- Original Message -----
> >>>>> Attached is the config.log.
> >>>>>
> >>>>> Thanks,
> >>>>>
> >>>>> Wei Huang
> >>>>> huangwei at ucar.edu
> >>>>> VETS/CISL
> >>>>> National Center for Atmospheric Research
> >>>>> P.O. Box 3000 (1850 Table Mesa Dr.)
> >>>>> Boulder, CO 80307-3000 USA
> >>>>> (303) 497-8924
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>> On May 4, 2011, at 9:40 AM, Anthony Chan wrote:
> >>>>>
> >>>>>>
> >>>>>> Can you send us the configure and make outputs as stated in the
> >>>>>> README ?
> >>>>>>
> >>>>>> A.Chan
> >>>>>>
> >>>>>> ----- Original Message -----
> >>>>>>> Hi, there,
> >>>>>>>
> >>>>>>> I tried to compile mpich2-1.3.2p1, and configure with:
> >>>>>>>
> >>>>>>> setenv CC pgcc
> >>>>>>> setenv FC pgf90
> >>>>>>>
> >>>>>>> ./configure \
> >>>>>>> --prefix=/neem2/huangwei/apps/mpich2-1.3.2p1
> >>>>>>>
> >>>>>>>
> >>>>>>> When I compile, I go the error message below.
> >>>>>>>
> >>>>>>> How do I solve this issue?
> >>>>>>>
> >>>>>>> Thanks,
> >>>>>>>
> >>>>>>> Wei
> >>>>>>>
> >>>>>>> huangwei at ucar.edu
> >>>>>>> VETS/CISL
> >>>>>>> National Center for Atmospheric Research
> >>>>>>> P.O. Box 3000 (1850 Table Mesa Dr.)
> >>>>>>> Boulder, CO 80307-3000 USA
> >>>>>>> (303) 497-8924
> >>>>>>>
> >>>>>>>
> >>>>>>> -----------
> >>>>>>>
> >>>>>>>
> >>>>>>> Making all in src
> >>>>>>> make[5]: Entering directory
> >>>>>>> `/neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/src'
> >>>>>>> CC topology.lo
> >>>>>>> pgcc-Warning-Unknown switch: -fvisibility=hidden
> >>>>>>> pgcc-Warning-Unknown switch: -fvisibility=hidden
> >>>>>>> PGC-S-0170-Designated initializers are not supported
> >>>>>>> (topology.c:
> >>>>>>> 497)
> >>>>>>> PGC-S-0170-Designated initializers are not supported
> >>>>>>> (topology.c:
> >>>>>>> 509)
> >>>>>>> PGC/x86-64 Linux/x86-64 6.2-5: compilation completed with
> >>>>>>> severe
> >>>>>>> errors
> >>>>>>> make[5]: *** [topology.lo] Error 1
> >>>>>>> make[5]: Leaving directory
> >>>>>>> `/neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc/src'
> >>>>>>> make[4]: *** [all-recursive] Error 1
> >>>>>>> make[4]: Leaving directory
> >>>>>>> `/neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra/tools/bind/hwloc/hwloc'
> >>>>>>> make[3]: *** [all-recursive] Error 1
> >>>>>>> make[3]: Leaving directory
> >>>>>>> `/neem2/huangwei/src/mpich2-1.3.2p1/src/pm/hydra'
> >>>>>>> make[2]: *** [all-redirect] Error 1
> >>>>>>> make[2]: Leaving directory
> >>>>>>> `/neem2/huangwei/src/mpich2-1.3.2p1/src/pm'
> >>>>>>> make[1]: *** [all-redirect] Error 2
> >>>>>>> make[1]: Leaving directory
> >>>>>>> `/neem2/huangwei/src/mpich2-1.3.2p1/src'
> >>>>>>> make: *** [all-redirect] Error 2
> >>>>>>>
> >>>>>>>
> >>>>>>> ------
> >>>>>>> compiler info:
> >>>>>>>
> >>>>>>> neem>pgcc -V
> >>>>>>>
> >>>>>>> pgcc 6.2-5 64-bit target on x86-64 Linux
> >>>>>>> Copyright 1989-2000, The Portland Group, Inc. All Rights
> >>>>>>> Reserved.
> >>>>>>> Copyright 2000-2006, STMicroelectronics, Inc. All Rights
> >>>>>>> Reserved.
> >>>>>>> neem>pgf90 -V
> >>>>>>>
> >>>>>>> pgf90 6.2-5 64-bit target on x86-64 Linux
> >>>>>>> Copyright 1989-2000, The Portland Group, Inc. All Rights
> >>>>>>> Reserved.
> >>>>>>> Copyright 2000-2006, STMicroelectronics, Inc. All Rights
> >>>>>>> Reserved.
> >>>>>>>
> >>>>>>>
> >>>>>>>
> >>>>>>> _______________________________________________
> >>>>>>> mpich-discuss mailing list
> >>>>>>> mpich-discuss at mcs.anl.gov
> >>>>>>> https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> >>>>>> _______________________________________________
> >>>>>> mpich-discuss mailing list
> >>>>>> mpich-discuss at mcs.anl.gov
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