[mpich-discuss] mpich2-1.2.1p1 - cannot create regular file`/index.htm': Permission denied

Thu Mar 11 15:34:49 CST 2010

We build MPICH2 quite routinely following the exact steps in the README
file, so something strange is happening in your specific case.

Rajeev

  _____  

From: mpich-discuss-bounces at mcs.anl.gov
[mailto:mpich-discuss-bounces at mcs.anl.gov] On Behalf Of Preeti
Sent: Thursday, March 11, 2010 1:26 PM
To: mpich-discuss at mcs.anl.gov
Subject: Re: [mpich-discuss] mpich2-1.2.1p1 - cannot create regular
file`/index.htm': Permission denied

Hi

Thanks for the replies, but I get following errors.

1. If I do only build in /tmp
cannot create regular file `/index.htm': Permission denied

2. if I do everything in /tmp, then the following error. 
 " Making all in mpl
/bin/sh: line 17: cd: mpl: No such file or directory
make[3]: *** [all-recursive] Error 1"

I have sent both log files earlier.
Yes, the /home/vss is network file system. I have no root access to the
system.

Is there any way out of this?
Please help.

Thanks
Preeti

On Thu, Mar 11, 2010 at 11:18 PM, Rajeev Thakur <thakur at mcs.anl.gov>
wrote:

Just untar and build it again on a local disk. The install directory
(--prefix option to configure) can be on NFS.

Rajeev

> -----Original Message-----
> From: mpich-discuss-bounces at mcs.anl.gov
> [mailto:mpich-discuss-bounces at mcs.anl.gov] On Behalf Of
> chan at mcs.anl.gov
> Sent: Thursday, March 11, 2010 11:48 AM
> To: mpich-discuss at mcs.anl.gov
> Subject: Re: [mpich-discuss] mpich2-1.2.1p1 - cannot create
> regular file `/index.htm': Permission denied
>
>
> Is your /home/vss a local filesystem or some type
> network file system ?  If /home/vss is a network
> filesystem, the problem could be incorrect clock
> on the filesystem. If so, could you copy
> everything to a local filesystem like /tmp(assuming
> it is big enough) and try again ?
>
> ----- "Preeti" <preeti at csa.iisc.ernet.in> wrote:
>
> > Hello
> >
> > I have rebuilt everything without setting the flags also
> >
> > /home/vss/preeti/bin/mpich2-1.2.1p1/configure
> > --prefix=/home/vss/preeti/bin/2-1.2.1build --enable-f90 2>&1 | tee
> > c.log
> >
> > make 2>&1 | tee m.log
> > make install 2>&1 | tee mi.log
> >
> >
> > and this time I get the following error
> >
> > /usr/bin/install -c -m 644 index.htm /index.htm
> > /usr/bin/install: cannot create regular file `/index.htm':
> Permission
> > denied
> > mkdir: cannot create directory `/www1': Permission denied
> >
> >
> > The log files are attached.
> > What am I missing?
> >
> > Appreciate your help.
> >
> >
> > Thanks
> > Preeti
> >
> >
> >
> >
> > On Thu, Mar 11, 2010 at 4:37 PM, Preeti <preeti at csa.iisc.ernet.in>
> > wrote:
> >
> > > Hello
> > >
> > > I have rebuilt everything from scratch and did vpath build.
> > > I set the following
> > >
> > >
> > > export F90=gfortran
> > > export F77=gfortran
> > > export LD_LIBRARY_PATH=/usr/lib64:/lib:/usr/lib
> > > export LD_RUN_PATH=/usr/lib64:/lib:/usr/lib
> > >
> > > /home/vss/preeti/bin/mpich2-1.2.1p1/configure
> > > --prefix=/home/vss/preeti/bin/2-1.2.1p1 --enable-f90 2>&1 | tee
> > c.log
> > >
> > > make 2>&1 | tee m.log
> > >
> > >
> > > Then I get the error
> > >
> > > Making all in mpl
> > > /bin/sh: line 17: cd: mpl: No such file or directory
> > >
> > > make[3]: *** [all-recursive] Error 1
> > >
> > > The files are attached.
> > > Please help.
> > >
> > >
> > > Thanks
> > > Preeti
> > >
> > >
> > >
> > >
> > >
> > >
> > > On Thu, Mar 11, 2010 at 1:53 AM, <chan at mcs.anl.gov> wrote:
> > >
> > >>
> > >> I don't think setting F77 and F90 causes the problem that
> > >> you are seeing.  The directories or subpackges that have
> > >> problems use a different build system than the majority of
> > >> mpich2 base, so it could be that there is bugs in the
> build system
> > >> in those subpackage.
> > >>
> > >> Since you didn't do "make distclean" before you reconfigure, so
> > >> the m.log(.old) do not tell me much. Can you rebuild everything
> > >> from scratch ?  i.e. untar the mpich2 tarball in a different
> > location.
> > >> Instead of doing an inpath build (i.e. cd mpich2-1.2.1p1/ ;
> > >> ./configure....),
> > >> could you do a VPATH build as documented in the README
> (search for
> > the
> > >> word VPATH)?  Send us the configure and make outputs again
> > >> (be sure to add 2>&1 in creating the output files).
> > >>
> > >> A.Chan
> > >>
> > >>
> > >> ----- "Preeti" <preeti at csa.iisc.ernet.in> wrote:
> > >>
> > >> > Hello
> > >> >
> > >> > Thank you for the quick response.
> > >> >
> > >> > I forgot to mention that I had set two flags earlier.
> > >> > export F90=gfortran
> > >> > export F77=gfortran
> > >> >
> > >> > The earlier problem is gone when I compiled without setting
> > these. I
> > >> > am
> > >> > attaching all log files, the earlier ones and the new ones.
> > >> >
> > >> > Now I am facing another error which is from "make install 2>& |
> > tee
> > >> > mi.log"
> > >> >
> > >> > /usr/bin/install: cannot create regular file `/index.htm':
> > Permission
> > >> > denied
> > >> >
> > >> > Probably some variable is not set. I tried setting docdir too.
> > >> > mi.log is also attached.
> > >> >
> > >> > Please help.
> > >> >
> > >> >
> > >> > Thanks
> > >> > Preeti
> > >> >
> > >> >
> > >> >
> > >> > On Wed, Mar 10, 2010 at 9:33 PM, <chan at mcs.anl.gov> wrote:
> > >> >
> > >> > >
> > >> > > It is unclear what went wrong based on what you've
> provided so
> > far.
> > >> > > Can you send us the configure and make outputs as stated in
> > the
> > >> > > README (be sure to include the stderr in the output file) ?
> > >> > >
> > >> > > ----- "Preeti" <preeti at csa.iisc.ernet.in> wrote:
> > >> > >
> > >> > > > Hello
> > >> > > >
> > >> > > > I am trying to install mpich2-1.2.1p1 on a 64-bit Linux
> > system.
> > >> > > >
> > >> > > > Configuration was successful.
> > >> > > > ./configure --prefix=$HOME/local/mpich2-1.2.1
> --enable-f90 |
> > tee
> > >> > > > c.log
> > >> > >
> > >> > > BTW, you didn't include stderr in c.log.  Depends on
> the shell
> > you
> > >> > > use, you need to either add "&" or "2>&1".  See README for
> > >> > details..
> > >> > >
> > >> > > A.Chan
> > >> > >
> > >> > > _______________________________________________
> > >> > > mpich-discuss mailing list
> > >> > > mpich-discuss at mcs.anl.gov
> > >> > > https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> > >> > >
> > >> > > --
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> > >> > > believed to be clean.
> > >> > >
> > >> > >
> > >> >
> > >> > _______________________________________________
> > >> > mpich-discuss mailing list
> > >> > mpich-discuss at mcs.anl.gov
> > >> > https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> > >> _______________________________________________
> > >> mpich-discuss mailing list
> > >> mpich-discuss at mcs.anl.gov
> > >> https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
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> >
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