[mpich-discuss] MPICH2 on HPC Server 2008 wdir problem
Jayesh Krishna
jayesh at mcs.anl.gov
Sun May 17 20:20:12 CDT 2009
Hi,
If you want to use a network drive in your job you will have to map it
explicity using the "-map" option of mpiexec (mpiexec -n 2 -map
k:\\host\share cpi.exe).
Regards,
Jayesh
-----Original Message-----
From: Addepalli, Srirangam V [mailto:srirangam.v.addepalli at ttu.edu]
Sent: Sunday, May 17, 2009 8:10 PM
To: Jayesh Krishna
Cc: mpich-discuss at mcs.anl.gov
Subject: RE: [mpich-discuss] MPICH2 on HPC Server 2008 wdir problem
Thank you all. I tried with the -wdir option compute node crashed with
blue screen but only after the job started to read/write to network drive.
I am assuming it is something to do with MS HPC job scheduler now.
Rangam
Problem signature:
Problem Event Name: BlueScreen
OS Version: 6.0.6001.2.1.0.272.18
Locale ID: 1033
Additional information about the problem:
BCCode: 27
BCP1: 00000000BAAD0075
BCP2: FFFFFA6005EF6228
BCP3: FFFFFA6005EF5C00
BCP4: FFFFFA6004111734
OS Version: 6_0_6001
Service Pack: 1_0
Product: 272_3
Files that help describe the problem:
C:\Windows\Minidump\Mini051709-04.dmp
C:\Users\Administrator\AppData\Local\Temp\2\WER-2587978-0.sysdata.xml
C:\Users\Administrator\AppData\Local\Temp\2\WER78F.tmp.version.txt
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________________________________________
From: Jayesh Krishna [jayesh at mcs.anl.gov]
Sent: Sunday, May 17, 2009 9:36 AM
To: Addepalli, Srirangam V
Cc: mpich-discuss at mcs.anl.gov
Subject: RE: [mpich-discuss] MPICH2 on HPC Server 2008 wdir problem
You will also need to set the working directory (-wdir) for your job.
-jayesh
-----Original Message-----
From: mpich-discuss-bounces at mcs.anl.gov
[mailto:mpich-discuss-bounces at mcs.anl.gov] On Behalf Of Markus Fischer
Sent: Sunday, May 17, 2009 4:10 AM
To: mpich-discuss at mcs.anl.gov
Subject: Re: [mpich-discuss] MPICH2 on HPC Server 2008 wdir problem
have you tried
job submit /workdir:\\p\a\t\h
Markus
Addepalli, Srirangam V wrote:
> Hello Jayesh,
>
> I tried both the options suggested.
>
> mpiexec -np 8 -path Z:\BIN\ nwchem.exe siosi3.nw (Here Z:\BIN is a
> network mapped drive) with MS HPC job scheduler variables
> WorkingDirectory \\Fileshare\BIN\ Using this option i was able to get
> the executable to start but it exits as it is not able find the input
> file.. siosi3.nw
>
> argument 1 = siosi3.nw
> could not open a file in permanent directory:
> could not open a file in scratch directory:
> Both permanent and scratch directory not accessible
> ******** Fatal Error ******** 911
> This option worked till it found the nwchem.exe binary. But executable
(nwchem) failed to read the input file from the directory it was supposed
to be reading from. I believe these errors are caused by the way the file
sharing is setup.
>
> I switched over to the second option and specified the full path
>
> mpiexec -np 8 \\Fileserv\BIN\nwchem.exe siosi3.nw
>
> Working Directory \\Fileserv\BIN\
>
> This kills the compute node ..with no information in the event viewer
about what triggered the reboot.same set of jobs work perfectly fine using
mpiexec wrapper interface ...
>
> So for i was only able to get it to work using mpiexecwrapper.
>
> mpiexec -np 8 nwchem.exe siosi3.nw (this works when both nwchem.exe
> and siosi3.nw are located in C:\
> MPICH2\bin)
>
> Rangam
> ________________________________________
> From: Jayesh Krishna [jayesh at mcs.anl.gov]
> Sent: Saturday, May 16, 2009 8:34 PM
> To: Addepalli, Srirangam V
> Cc: mpich-discuss at mcs.anl.gov
> Subject: RE: [mpich-discuss] MPICH2 on HPC Server 2008 wdir problem
>
> Hi,
>
> # Does specifying a complete path to the executable work (mpiexec -n 2
c:\temp\cpi.exe )?
> # Did you try the "-path" option of mpiexec when launching your job
(mpiexec -n 2 -path c:\temp cpi.exe) ?
>
> -jayesh
>
> -----Original Message-----
> From: mpich-discuss-bounces at mcs.anl.gov
> [mailto:mpich-discuss-bounces at mcs.anl.gov] On Behalf Of Addepalli,
> Srirangam V
> Sent: Friday, May 15, 2009 5:18 PM
> To: mpich-discuss at mcs.anl.gov
> Subject: [mpich-discuss] MPICH2 on HPC Server 2008 wdir problem
>
> Hello All.
> I am trying to used MPICH2 on windows HPC Cluster. Using HPC job
scheduler i am not able to specify the work directory when i try to submit
a job. mpiexec will look at the input files only if preset in MPICH2/BIN
directory. I have tried using the -wdir setting but not able to get
mpiexec to work.
> Sincerely
> Rangam
>
>
>
>
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>
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