[mpich-discuss] mpif77 with ifort?
Rajeev Thakur
thakur at mcs.anl.gov
Tue Oct 7 14:04:47 CDT 2008
Can you send us the output printed by configure on the screen? You can send
it to mpich2-maint at mcs.anl.gov.
Rajeev
> -----Original Message-----
> From: owner-mpich-discuss at mcs.anl.gov
> [mailto:owner-mpich-discuss at mcs.anl.gov] On Behalf Of
> Christopher Tanner
> Sent: Tuesday, October 07, 2008 1:42 PM
> To: mpich-discuss at mcs.anl.gov
> Subject: [mpich-discuss] mpif77 with ifort?
>
> I compiled MPICH2 (1.0.7) using the Intel compilers and everything
> seemed to go fine. However, when I performed the 'mpecheckinstall'
> script in the <mpich2_dir>/sbin/ directory, I received the following
> errors with F77:
>
> *** Link F77 program with the MPI and manual logging
> libraries ........... \c
> No.
> The failed command is :
> /usr/local/mpi/mpich2-1.0.7/bin/mpif77 -I/usr/local/mpi/mpich2-1.0.7/
> include -O2 -c fpilog.f
> /usr/local/mpi/mpich2-1.0.7/bin/mpif77 -mpe=mpilog -O2 -o fpilog
> fpilog.o -lm
> /usr/local/mpi/mpich2-1.0.7/lib/libmpe.a(clog_commset.po): In
> function
> `CLOG_CommSet_read':
> clog_commset.c:(.text+0x228): undefined reference to
> `_intel_fast_memset'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpe.a(clog_commset.po): In
> function
> `CLOG_CommSet_append_GIDs':
> clog_commset.c:(.text+0x73f): undefined reference to
> `_intel_fast_memset'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpe.a(clog_commset.po): In
> function
> `CLOG_CommSet_add_GID':
> clog_commset.c:(.text+0x8c4): undefined reference to
> `_intel_fast_memset'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpe.a(clog_commset.po): In
> function
> `CLOG_CommSet_merge':
> clog_commset.c:(.text+0xb14): undefined reference to
> `_intel_fast_memset'
> clog_commset.c:(.text+0xc46): undefined reference to
> `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpe.a(clog_commset.po): In
> function
> `CLOG_CommSet_add_intracomm':
> clog_commset.c:(.text+0xfdd): undefined reference to
> `_intel_fast_memset'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpe.a(clog_commset.po): In
> function
> `CLOG_CommSet_add_intercomm':
> clog_commset.c:(.text+0x118c): undefined reference to
> `_intel_fast_memset'
> clog_commset.c:(.text+0x1231): undefined reference to
> `_intel_fast_memset'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpe.a(clog_commset.po): In
> function
> `CLOG_CommSet_create':
> clog_commset.c:(.text+0x152a): undefined reference to
> `_intel_fast_memset'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpe.a(clog_commset.po): In
> function
> `CLOG_CommSet_init':
> clog_commset.c:(.text+0x1624): undefined reference to
> `_intel_fast_memset'
> /usr/local/mpi/mpich2-1.0.7/lib/
> libmpe.a(clog_commset.po):clog_commset.c:(.text+0x1725): more
> undefined references to `_intel_fast_memset' follow
> /usr/local/mpi/mpich2-1.0.7/lib/libmpe.a(mpe_log.po): In function
> `MPE_Log_pack':
> mpe_log.c:(.text+0xdb6): undefined reference to `_intel_fast_memcpy'
> mpe_log.c:(.text+0xdec): undefined reference to `_intel_fast_memcpy'
> mpe_log.c:(.text+0xe33): undefined reference to `_intel_fast_memcpy'
> mpe_log.c:(.text+0xe76): undefined reference to `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpe.a(iterator.po): In function
> `MPE_CallStack_iteratorInit':
> iterator.c:(.text+0xd4): undefined reference to `_intel_fast_memset'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpe.a(clog_uuid.po): In function
> `CLOG_Uuid_compare':
> clog_uuid.c:(.text+0x55): undefined reference to `_intel_fast_memcmp'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpe.a(clog_uuid.po): In function
> `CLOG_Uuid_is_equal':
> clog_uuid.c:(.text+0x63): undefined reference to `_intel_fast_memcmp'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpe.a(clog_uuid.po): In function
> `CLOG_Uuid_generate':
> clog_uuid.c:(.text+0x170): undefined reference to `_intel_fast_memcpy'
> clog_uuid.c:(.text+0x194): undefined reference to `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpe.a(clog_merger.po): In
> function
> `CLOG_Merger_next_localblock_hdr':
> clog_merger.c:(.text+0x1e4): undefined reference to
> `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpe.a(clog_merger.po): In
> function
> `CLOG_Merger_save_rec':
> clog_merger.c:(.text+0x41d): undefined reference to
> `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpe.a(clog_merger.po): In
> function
> `CLOG_Merger_next_sideblock_hdr':
> clog_merger.c:(.text+0x557): undefined reference to
> `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpe.a(clog_merger.po):clog_
> merger.c:
> (.text+0x920): more undefined references to
> `_intel_fast_memcpy' follow
> /usr/local/mpi/mpich2-1.0.7/lib/libmpich.a(group_range_excl.o): In
> function `MPI_Group_range_excl':
> group_range_excl.c:(.text+0x210): undefined reference to
> `__svml_idiv4'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpich.a(group_range_incl.o): In
> function `MPI_Group_range_incl':
> group_range_incl.c:(.text+0x203): undefined reference to
> `__svml_idiv4'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpich.a(ad_open.o): In function
> `ADIO_Open':
> ad_open.c:(.text+0x611): undefined reference to `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpich.a(ad_read_coll.o): In
> function `ADIOI_GEN_ReadStridedColl':
> ad_read_coll.c:(.text+0x18fa): undefined reference to
> `_intel_fast_memcpy'
> ad_read_coll.c:(.text+0x194c): undefined reference to
> `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpich.a(ad_read_coll.o): In
> function `ADIOI_R_Exchange_data':
> ad_read_coll.c:(.text+0x2c35): undefined reference to
> `_intel_fast_memcpy'
> ad_read_coll.c:(.text+0x2dff): undefined reference to
> `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/
> libmpich.a(ad_write_coll.o):ad_write_coll.c:(.text+0x2a56): more
> undefined references to `_intel_fast_memcpy' follow
> /usr/local/mpi/mpich2-1.0.7/lib/libmpich.a(cb_config_list.o): In
> function `ADIOI_cb_config_list_parse':
> cb_config_list.c:(.text+0x122): undefined reference to
> `_intel_fast_memset'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpich.a(ch3u_handle_recv_pk
> t.o): In
> function `MPIDI_CH3_PktHandler_LockAccumUnlock':
> ch3u_handle_recv_pkt.c:(.text+0x736): undefined reference to
> `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpich.a(ch3u_handle_recv_pk
> t.o): In
> function `MPIDI_CH3U_Receive_data_found':
> ch3u_handle_recv_pkt.c:(.text+0x100f): undefined reference to
> `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpich.a(ch3u_handle_recv_pk
> t.o): In
> function `MPIDI_CH3_PktHandler_GetResp':
> ch3u_handle_recv_pkt.c:(.text+0x1774): undefined reference to
> `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpich.a(ch3u_handle_recv_pk
> t.o): In
> function `MPIDI_CH3_PktHandler_Get':
> ch3u_handle_recv_pkt.c:(.text+0x1cdb): undefined reference to
> `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpich.a(ch3u_handle_recv_pk
> t.o): In
> function `MPIDI_CH3_PktHandler_Accumulate':
> ch3u_handle_recv_pkt.c:(.text+0x21d1): undefined reference to
> `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/
> libmpich.a(ch3u_handle_recv_pkt.o):ch3u_handle_recv_pkt.c:(.text
> +0x2380): more undefined references to `_intel_fast_memcpy' follow
> /usr/local/mpi/mpich2-1.0.7/lib/libmpich.a(ad_write_str.o): In
> function `ADIOI_GEN_WriteStrided':
> ad_write_str.c:(.text+0x703): undefined reference to
> `_intel_fast_memset'
> ad_write_str.c:(.text+0x8b3): undefined reference to
> `_intel_fast_memcpy'
> ad_write_str.c:(.text+0xa55): undefined reference to
> `_intel_fast_memcpy'
> ad_write_str.c:(.text+0xd4a): undefined reference to
> `_intel_fast_memcpy'
> ad_write_str.c:(.text+0xed2): undefined reference to
> `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpich.a(ad_nfs_read.o): In
> function
> `ADIOI_NFS_ReadStrided':
> ad_nfs_read.c:(.text+0x4e5): undefined reference to
> `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/
> libmpich.a(ad_nfs_read.o):ad_nfs_read.c:(.text+0x532): more
> undefined
> references to `_intel_fast_memcpy' follow
> /usr/local/mpi/mpich2-1.0.7/lib/libmpich.a(ad_prealloc.o): In
> function
> `ADIOI_GEN_Prealloc':
> ad_prealloc.c:(.text+0x17c): undefined reference to
> `_intel_fast_memset'
> collect2: ld returned 1 exit status
> make[1]: *** [fpilog] Error 1
>
> Running installation linktest for Fortran collchk program...
>
> *** Link F77 program with the MPI collective/datatype checking
> library ... \c
> No.
> The failed command is :
> /usr/local/mpi/mpich2-1.0.7/bin/mpif77 -I/usr/local/mpi/mpich2-1.0.7/
> include -O2 -c wrong_reals.f
> /usr/local/mpi/mpich2-1.0.7/bin/mpif77 -mpe=mpicheck -O2 -o
> wrong_reals wrong_reals.o
> /usr/local/mpi/mpich2-1.0.7/lib/libmpe.a(iterator.po): In function
> `MPE_CallStack_iteratorInit':
> iterator.c:(.text+0xd4): undefined reference to `_intel_fast_memset'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpich.a(helper_fns.o): In
> function
> `MPIR_Localcopy':
> helper_fns.c:(.text+0x6b3): undefined reference to
> `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpich.a(errutil.o): In function
> `MPIR_Err_create_code_valist':
> errutil.c:(.text+0x1ca3): undefined reference to `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpich.a(ch3u_handle_recv_pk
> t.o): In
> function `MPIDI_CH3_PktHandler_LockAccumUnlock':
> ch3u_handle_recv_pkt.c:(.text+0x736): undefined reference to
> `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpich.a(ch3u_handle_recv_pk
> t.o): In
> function `MPIDI_CH3U_Receive_data_found':
> ch3u_handle_recv_pkt.c:(.text+0x100f): undefined reference to
> `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/libmpich.a(ch3u_handle_recv_pk
> t.o): In
> function `MPIDI_CH3_PktHandler_GetResp':
> ch3u_handle_recv_pkt.c:(.text+0x1774): undefined reference to
> `_intel_fast_memcpy'
> /usr/local/mpi/mpich2-1.0.7/lib/
> libmpich.a(ch3u_handle_recv_pkt.o):ch3u_handle_recv_pkt.c:(.text
> +0x1cdb): more undefined references to `_intel_fast_memcpy' follow
> collect2: ld returned 1 exit status
> make[1]: *** [wrong_reals] Error 1
>
>
> Everything with C was fine. Is there an issue I have with ifort and
> mpich2? Thanks!
>
> -------------------------------------------
> Chris Tanner
> Space Systems Design Lab
> Georgia Institute of Technology
> christopher.tanner at gatech.edu
> -------------------------------------------
>
>
>
>
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