[mpich-discuss] Deadlock when in MPI_THREAD_MULTIPLE within the MPI_Comm_disconnect()

Roberto Fichera kernel at tekno-soft.it
Tue Aug 26 11:15:32 CDT 2008


Hi All on the list,

Just to know if anyone has some news (fixes) about the issue below:

Roberto Fichera ha scritto:
> Hi All on the list,
>
> I guess to have found a dead lock in the last MPICH2 v1.0.7, the scenery is the following:
>
> thread 1 is the main user's application;
> threads 2/3/4 are using the MPI functions for dynamically spawn a slave in a choosed node
>         exchange some data, waiting the slave termination and finally they calls the 
>         MPI_Comm_disconnect() for releasing the master/slave intercommunicator;
> thread 5 is the dispatcher of the 2/3/4 threads it waits their termination;
>
> So, looking at the calltrace of the thread2 the MPI is waiting that the poll(), which was called by MPIDU_Sock_wait(), 
> returns, here we are within the MPI_Comm_disconnect(). The call trace of the thread3/4 is also in the 
> MPI_Comm_disconnect() but it's waiting in a condition called by the MPIDI_CH3I_Progress(). So basically all the
> three threads are stuck in the MPI_Comm_disconnect()! 
>
> Does anyone have an idea what's going on here?
>
> Thanks in advance.
> Roberto Fichera.
>
>  
> (gdb) thread 1
> [Switching to thread 1 (Thread 46912533127120 (LWP 30857))]#0  0x00000033ca40a8f9 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> (gdb) bt
> #0  0x00000033ca40a8f9 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> #1  0x00002aaaab0b08a2 in Cond_wait () from /home/simone/.HRI/Proxy/HRI/Libraries/MThreads/1.1/lib/linux-x86_64-gcc-glibc2.3.4/libMThreads.so.1.1
> #2  0x00002aaaabb8a787 in MTQueue_popWait (self=0x636b70, userClass=0x0, microsecs=0) at MTQueue.c:177
> #3  0x000000000040642b in main (argc=1, argv=0x7fff4e7909f8) at ackley_master.cpp:265
>
> //=============================================================================
>
> (gdb) thread 2
> [Switching to thread 2 (Thread 1094719824 (LWP 1279))]#0  0x00000033c94cbd66 in poll () from /lib64/libc.so.6
> (gdb) bt
> #0  0x00000033c94cbd66 in poll () from /lib64/libc.so.6
> #1  0x00002aaaab5a3d2f in MPIDU_Sock_wait () from /home/roberto/.HRI/Proxy/HRI/External/mpich2/1.0.7/lib/linux-x86_64-gcc-glibc2.3.4/libmpich.so.1.1
> #2  0x00002aaaab52bdc7 in MPIDI_CH3I_Progress () from /home/roberto/.HRI/Proxy/HRI/External/mpich2/1.0.7/lib/linux-x86_64-gcc-glibc2.3.4/libmpich.so.1.1
> #3  0x00002aaaab5301a7 in MPIDI_CH3U_VC_WaitForClose () from /home/roberto/.HRI/Proxy/HRI/External/mpich2/1.0.7/lib/linux-x86_64-gcc-glibc2.3.4/libmpich.so.1.1
> #4  0x00002aaaab56f162 in MPID_Comm_disconnect () from /home/roberto/.HRI/Proxy/HRI/External/mpich2/1.0.7/lib/linux-x86_64-gcc-glibc2.3.4/libmpich.so.1.1
> #5  0x00002aaaab5417ec in PMPI_Comm_disconnect () from /home/roberto/.HRI/Proxy/HRI/External/mpich2/1.0.7/lib/linux-x86_64-gcc-glibc2.3.4/libmpich.so.1.1
> #6  0x00002aaaabda5a99 in ParallelWorker_destroySlave (self=0x6358e0) at ParallelWorker.c:819
> #7  0x00002aaaabda6223 in ParallelWorker_threadMain (arg=0x6358e0) at ParallelWorker.c:515
> #8  0x00000033ca406407 in start_thread () from /lib64/libpthread.so.0
> #9  0x00000033c94d4b0d in clone () from /lib64/libc.so.6
>
> //=============================================================================
>
> (gdb) thread 3
> [Switching to thread 3 (Thread 1084229968 (LWP 1278))]#0  0x00000033ca40a8f9 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> (gdb) bt
> #0  0x00000033ca40a8f9 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> #1  0x00002aaaab52bec7 in MPIDI_CH3I_Progress () from /home/roberto/.HRI/Proxy/HRI/External/mpich2/1.0.7/lib/linux-x86_64-gcc-glibc2.3.4/libmpich.so.1.1
> #2  0x00002aaaab5301a7 in MPIDI_CH3U_VC_WaitForClose () from /home/roberto/.HRI/Proxy/HRI/External/mpich2/1.0.7/lib/linux-x86_64-gcc-glibc2.3.4/libmpich.so.1.1
> #3  0x00002aaaab56f162 in MPID_Comm_disconnect () from /home/roberto/.HRI/Proxy/HRI/External/mpich2/1.0.7/lib/linux-x86_64-gcc-glibc2.3.4/libmpich.so.1.1
> #4  0x00002aaaab5417ec in PMPI_Comm_disconnect () from /home/roberto/.HRI/Proxy/HRI/External/mpich2/1.0.7/lib/linux-x86_64-gcc-glibc2.3.4/libmpich.so.1.1
> #5  0x00002aaaabda5a99 in ParallelWorker_destroySlave (self=0x634d20) at ParallelWorker.c:819
> #6  0x00002aaaabda6223 in ParallelWorker_threadMain (arg=0x634d20) at ParallelWorker.c:515
> #7  0x00000033ca406407 in start_thread () from /lib64/libpthread.so.0
> #8  0x00000033c94d4b0d in clone () from /lib64/libc.so.6
>
> //=============================================================================
>
> (gdb) thread 4
> [Switching to thread 4 (Thread 1115699536 (LWP 1277))]#0  0x00000033ca40a8f9 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> (gdb) bt
> #0  0x00000033ca40a8f9 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> #1  0x00002aaaab52bec7 in MPIDI_CH3I_Progress () from /home/roberto/.HRI/Proxy/HRI/External/mpich2/1.0.7/lib/linux-x86_64-gcc-glibc2.3.4/libmpich.so.1.1
> #2  0x00002aaaab5301a7 in MPIDI_CH3U_VC_WaitForClose () from /home/roberto/.HRI/Proxy/HRI/External/mpich2/1.0.7/lib/linux-x86_64-gcc-glibc2.3.4/libmpich.so.1.1
> #3  0x00002aaaab56f162 in MPID_Comm_disconnect () from /home/roberto/.HRI/Proxy/HRI/External/mpich2/1.0.7/lib/linux-x86_64-gcc-glibc2.3.4/libmpich.so.1.1
> #4  0x00002aaaab5417ec in PMPI_Comm_disconnect () from /home/roberto/.HRI/Proxy/HRI/External/mpich2/1.0.7/lib/linux-x86_64-gcc-glibc2.3.4/libmpich.so.1.1
> #5  0x00002aaaabda5a99 in ParallelWorker_destroySlave (self=0x6341a0) at ParallelWorker.c:819
> #6  0x00002aaaabda6223 in ParallelWorker_threadMain (arg=0x6341a0) at ParallelWorker.c:515
> #7  0x00000033ca406407 in start_thread () from /lib64/libpthread.so.0
> #8  0x00000033c94d4b0d in clone () from /lib64/libc.so.6
>
> //=============================================================================
>
> (gdb) thread 5
> [Switching to thread 5 (Thread 1105209680 (LWP 1276))]#0  0x00000033ca40a8f9 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> (gdb) bt
> #0  0x00000033ca40a8f9 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> #1  0x00002aaaab0b08a2 in Cond_wait () from /home/roberto/.HRI/Proxy/HRI/Libraries/MThreads/1.1/lib/linux-x86_64-gcc-glibc2.3.4/libMThreads.so.1.1
> #2  0x00002aaaabd9e775 in Parallel_threadMain (arg=0x636830) at Parallel.c:645
> #3  0x00000033ca406407 in start_thread () from /lib64/libpthread.so.0
> #4  0x00000033c94d4b0d in clone () from /lib64/libc.so.6

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