[mpich-discuss] What are the ways to improve efficiency of node?
wangxinquan
wangxinquan at tju.edu.cn
Mon Apr 14 19:52:09 CDT 2008
Dear all,
Recently, I'm doing a vc-relax calculation of 96 atom system(2*2*2 supercell,24cpu).
The load for each node is as follow:
node(2cpu work/node):
281:98%
325:84%
337:73%
280:87%
307:77%
276:64%
318:55%
351:64%
341:50%
329:23%
node(1cpu work/node):
322:93%
269:100%
343:76%
300:99%
node329 and node341 are inefficient.
My questions are:
1. What are the ways to improve efficiency of node?
2. By now 8 iterations have been taken 10 hours. I'm afraid it is a little slow.
Is 24cpu enough for 96 atoms relaxation?
PS:
------------------------------------------------------------
HPC background:
Nankai Stars (http://202.113.29.200/introduce.htm)
800 Xeon 3.06 Ghz CPU (400 nodes)
800 GB Memory
53T High-Speed Storage
Myrinet
Parallel jobs are run and debuged through Platform LSF system.
Mpich_gm driver:1.2.6..13a
Test package: Espresso-3.2.3
-------------------------------------------------------------
Any hints will be deeply appreciated!
Best regards, Wang
=====================================
X.Q. Wang
wangxinquan at tju.edu.cn
Schoolof Chemical Engineeringand Technology
TianjinUniversity
92 Weijin Road, Tianjin, P. R. China
tel:86-22-27890268, fax: 86-22-27892301
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