[MOAB-dev] Disable fortran in moab-5.0.0

[Paul Wilson]

Hello Lorenzo

As of v5.0 MOAB requires FORTRAN to link to lapack/blas.  I discovered this issue with building and the master branch does have this change in the CMAKE files.

Paul


-- ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ --
Paul P.H. Wilson
Grainger Professor of Nuclear Engineering
608-263-0807<tel:608-263-0807>
paul.wilson at wisc.edu<mailto:paul.wilson at wisc.edu>
443 Engineering Research Bldg
1500 Engineering Dr, Madison, WI 53706<x-apple-data-detectors://18/2>
calendar: http://go.wisc.edu/pphw-cal

Computational Nuclear Engineering Research Group
cnerg.engr.wisc.edu<http://cnerg.engr.wisc.edu/>

[sent from my iPad]

On Nov 9, 2017, at 03:57, Lorenzo Botti <bottilorenzo at gmail.com<mailto:bottilorenzo at gmail.com>> wrote:

Dear all,
I’d like to move to the latest moab but I’m having trouble disabling fortran.
I tried to modify compiler.m4 but it seems that this is not enough, see below

dlm249-190:moab-5.0.0 digihabia$ ./configure --disable-fortran --disable-imesh --with-mpi=/Users/digihabia/src2/openmpi-3.0.0/openmpi/ --download-hdf5 --prefix=/Users/digihabia/src2/moab-5.0.0/moab/
checking build system type... x86_64-apple-darwin17.2.0
checking host system type... x86_64-apple-darwin17.2.0
checking target system type... x86_64-apple-darwin17.2.0
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... config/install-sh -c -d
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether make supports nested variables... (cached) yes
checking for sed... sed
checking for readlink... yes
checking for dirname... yes
checking for basename... yes
checking for rsync... yes
checking for wget... no
checking for scp... yes
checking for curl... yes
checking for tar... yes
checking for unzip... yes
checking for bzip2... yes
checking for md5sum... no
checking for shasum... yes
checking for shasum... /usr/bin/shasum
checking whether ln -s works... yes
checking for mkdir... /bin/mkdir
checking whether make sets $(MAKE)... (cached) yes
checking for style of include used by make... GNU
checking for gcc... /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicc accepts -g... yes
checking for /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicc option to accept ISO C89... none needed
checking whether /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicc understands -c and -o together... yes
checking dependency style of /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicc... gcc3
checking how to run the C preprocessor... /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicc -E
checking whether we are using the GNU C++ compiler... yes
checking whether /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicxx accepts -g... yes
checking dependency style of /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicxx... gcc3
checking how to run the C++ preprocessor... /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicxx -E
checking how to get verbose linking output from ... configure: WARNING: compilation failed

checking for Fortran 77 libraries of ...
checking how to get verbose linking output from ... configure: WARNING: compilation failed

checking for Fortran libraries of ...
checking for known C compilers... Clang
checking for known compiler/OS combinations... Clang:x86_64
checking for known c++ compilers... Clang
checking for known compiler/CPU/OS combinations... Clang:darwin17.2.0:x86_64
checking if platform is IBM BlueGene... no
checking whether ln -s works... yes
checking whether make sets $(MAKE)... (cached) yes
checking how to print strings... printf
checking for a sed that does not truncate output... sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicc... /Library/Developer/CommandLineTools/usr/bin/ld
checking if the linker (/Library/Developer/CommandLineTools/usr/bin/ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking the maximum length of command line arguments... 196608
checking how to convert x86_64-apple-darwin17.2.0 file names to x86_64-apple-darwin17.2.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin17.2.0 file names to toolchain format... func_convert_file_noop
checking for /Library/Developer/CommandLineTools/usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
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checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
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checking for objdir... .libs
checking if /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicc supports -fno-rtti -fno-exceptions... yes
checking for /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicc option to produce PIC... -fno-common -DPIC
checking if /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicc PIC flag -fno-common -DPIC works... yes
checking if /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicc static flag -static works... no
checking if /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicc supports -c -o file.o... yes
checking if /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicc supports -c -o file.o... (cached) yes
checking whether the /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicc linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin17.2.0 dyld
checking how to hardcode library paths into programs... immediate
checking for dlopen in -ldl... yes
checking whether a program can dlopen itself... yes
checking whether a statically linked program can dlopen itself... yes
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... no
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicxx -E
checking for ld used by /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicxx... /Library/Developer/CommandLineTools/usr/bin/ld
checking if the linker (/Library/Developer/CommandLineTools/usr/bin/ld) is GNU ld... no
checking whether the /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicxx linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes
checking for /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicxx option to produce PIC... -fno-common -DPIC
checking if /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicxx PIC flag -fno-common -DPIC works... yes
checking if /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicxx static flag -static works... no
checking if /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicxx supports -c -o file.o... yes
checking if /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicxx supports -c -o file.o... (cached) yes
checking whether the /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicxx linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin17.2.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether byte ordering is bigendian... no
checking for gunzip... gunzip -c
checking for gzip... (cached) gunzip -c
checking for zcat... (cached) gunzip -c
checking if C++ compiler supports template class specialization... yes
checking if C++ compiler supports template function specialization... yes
checking if /Users/digihabia/src2/openmpi-3.0.0/openmpi//bin/mpicxx works... yes
checking for vsnprintf... yes
checking for vsprintf... yes
checking for clock... yes
checking for times... yes
checking for cbrt... yes
checking if std::vector has templatized insert method... yes
checking if std::copy must be old SGI format... no
checking for ANSI C header files... (cached) yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking for strings.h... (cached) yes
checking sys/file.h usability... yes
checking sys/file.h presence... yes
checking for sys/file.h... yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking for unistd.h... (cached) yes
checking for inttypes.h... (cached) yes
checking for stdint.h... (cached) yes
checking stddef.h usability... yes
checking stddef.h presence... yes
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checking for stdlib.h... (cached) yes
checking ieeefp.h usability... no
checking ieeefp.h presence... no
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checking termios.h usability... yes
checking termios.h presence... yes
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checking sys/ioctl.h usability... yes
checking sys/ioctl.h presence... yes
checking for sys/ioctl.h... yes
checking size of void *... 8
checking for size_t... yes
checking for ptrdiff_t... yes
checking for dlopen in -ldl... (cached) yes
checking for compress in -lz... yes
checking for pow in -lm... yes
checking for dummy main to link with Fortran libraries... none
checking for Fortran name-mangling scheme... configure: error: in `/Users/digihabia/src2/moab-5.0.0':
configure: error: cannot compile a simple Fortran program
See `config.log' for more details
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