[MOAB-dev] Issue with PyTaps1.4
Anthony Scopatz
scopatz at gmail.com
Tue Oct 28 17:01:31 CDT 2014
Hmm can you send the LD_LIBRARY_PATH and LIBRARY_PATH?
On Tue, Oct 28, 2014 at 5:00 PM, Chris Eldred <chris.eldred at gmail.com>
wrote:
> Here are the contents of /usr/local/lib:
>
> drwxr-sr-x 10 8338 1500 4096 Jul 27 2011 ..
> -rwxr-xr-x 1 root root 386485 Nov 27 2013 libnfft3.so.1.0.0
> lrwxrwxrwx 1 root root 17 Nov 27 2013 libnfft3.so.1 ->
> libnfft3.so.1.0.0
> lrwxrwxrwx 1 root root 17 Nov 27 2013 libnfft3.so ->
> libnfft3.so.1.0.0
> -rwxr-xr-x 1 root root 936 Nov 27 2013 libnfft3.la
> -rw-r--r-- 1 root root 512588 Nov 27 2013 libnfft3.a
> drwxr-xr-x 2 root root 4096 Nov 27 2013 pkgconfig
> drwxr-sr-x 4 8338 1500 4096 Mar 11 2014 python2.7
> -rwxr-xr-x 1 root 1500 2695447 Oct 28 14:58 libMOAB.so.0.0.0
> lrwxrwxrwx 1 root 1500 16 Oct 28 14:58 libMOAB.so.0 ->
> libMOAB.so.0.0.0
> lrwxrwxrwx 1 root 1500 16 Oct 28 14:58 libMOAB.so -> libMOAB.so.0.0.0
> -rwxr-xr-x 1 root 1500 1078 Oct 28 14:58 libMOAB.la
> -rw-r--r-- 1 root 1500 5203408 Oct 28 14:58 libMOAB.a
> -rwxr-xr-x 1 root 1500 173197 Oct 28 14:58 libiMesh.so.0.0.0
> lrwxrwxrwx 1 root 1500 17 Oct 28 14:58 libiMesh.so.0 ->
> libiMesh.so.0.0.0
> lrwxrwxrwx 1 root 1500 17 Oct 28 14:58 libiMesh.so ->
> libiMesh.so.0.0.0
> -rwxr-xr-x 1 root 1500 1111 Oct 28 14:58 libiMesh.la
> -rw-r--r-- 1 root 1500 201020 Oct 28 14:58 libiMesh.a
> -rw-r--r-- 1 root 1500 1840 Oct 28 14:58 iMesh-Defs.inc
> -rwxr-xr-x 1 root 1500 102596 Oct 28 14:58 libmbcslam.so.0.0.0
> lrwxrwxrwx 1 root 1500 19 Oct 28 14:58 libmbcslam.so.0 ->
> libmbcslam.so.0.0.0
> lrwxrwxrwx 1 root 1500 19 Oct 28 14:58 libmbcslam.so ->
> libmbcslam.so.0.0.0
> -rwxr-xr-x 1 root 1500 1152 Oct 28 14:58 libmbcslam.la
> -rw-r--r-- 1 root 1500 180744 Oct 28 14:58 libmbcslam.a
> -rwxr-xr-x 1 root 1500 99357 Oct 28 14:58 libdagmc.so.0.0.0
> lrwxrwxrwx 1 root 1500 17 Oct 28 14:58 libdagmc.so.0 ->
> libdagmc.so.0.0.0
> lrwxrwxrwx 1 root 1500 17 Oct 28 14:58 libdagmc.so ->
> libdagmc.so.0.0.0
> -rwxr-xr-x 1 root 1500 1036 Oct 28 14:58 libdagmc.la
> -rw-r--r-- 1 root 1500 119174 Oct 28 14:58 libdagmc.a
> -rw-r--r-- 1 root 1500 112 Oct 28 14:58 moab.config
> drwxr-sr-x 4 8338 1500 4096 Oct 28 14:58 .
> -rw-r--r-- 1 root 1500 1993 Oct 28 14:58 moab.make
> -rw-r--r-- 1 root 1500 1593 Oct 28 14:58 MOABConfig.cmake
>
> -Chris
>
> On Tue, Oct 28, 2014 at 3:59 PM, Chris Eldred <chris.eldred at gmail.com>
> wrote:
>
>> I get:
>>
>> ldd
>> /usr/local/lib/python2.7/dist-packages/PyTAPS-1.4-py2.7-linux-x86_64.egg/itaps/iMesh.so
>> linux-vdso.so.1 => (0x00007fff8ffff000)
>> libiMesh.so.0 => not found
>> libpthread.so.0 => /lib/x86_64-linux-gnu/libpthread.so.0
>> (0x00007f607df08000)
>> libc.so.6 => /lib/x86_64-linux-gnu/libc.so.6 (0x00007f607db47000)
>> /lib64/ld-linux-x86-64.so.2 (0x00007f607e35f000)
>>
>> But libiMesh.so.0 exists in /usr/local/lib.
>>
>> -Chris
>>
>>
>> On Tue, Oct 28, 2014 at 3:54 PM, Anthony Scopatz <scopatz at gmail.com>
>> wrote:
>>
>>> What are the results of
>>>
>>> ldd
>>> ~/.local/lib/python2.7/site-packages/PyTAPS-1.4-py2.7-linux-x86_64.egg/itaps/iMesh.so
>>>
>>> Or similar for your system?
>>>
>>> On Tue, Oct 28, 2014 at 4:52 PM, Chris Eldred <chris.eldred at gmail.com>
>>> wrote:
>>>
>>>> It is in /usr/local/lib, which should be on LD_LIBRARY_PATH.
>>>>
>>>> -Chris
>>>>
>>>> On Tue, Oct 28, 2014 at 3:45 PM, Anthony Scopatz <scopatz at gmail.com>
>>>> wrote:
>>>>
>>>>> Hi Chris,
>>>>>
>>>>> Is libiMesh.so on your LD_LIBRARY_PATH?
>>>>>
>>>>> Be Well
>>>>> Anthony
>>>>>
>>>>> On Tue, Oct 28, 2014 at 4:44 PM, Chris Eldred <chris.eldred at gmail.com>
>>>>> wrote:
>>>>>
>>>>>> Not sure if this is the correct location for this query, but I
>>>>>> haven't been able to find a mailing address for the PyTaps project.
>>>>>>
>>>>>> I am attempting to use the python interface to iTAPS (PyTAPS), but
>>>>>> the following issue arises:
>>>>>>
>>>>>> >>> import itaps
>>>>>> >>> from itaps import iBase
>>>>>> >>> from itaps import iMesh
>>>>>> Traceback (most recent call last):
>>>>>> File "<stdin>", line 1, in <module>
>>>>>> ImportError: libiMesh.so.0: cannot open shared object file: No such
>>>>>> file or directory
>>>>>>
>>>>>> I have the latest version of MOAB installed with shared libraries, so
>>>>>> it not clear to me why python cannot find the correct shared object file.
>>>>>>
>>>>>> Thanks,
>>>>>> Chris Eldred
>>>>>>
>>>>>> --
>>>>>> Chris Eldred
>>>>>> DOE Computational Science Graduate Fellow
>>>>>> Graduate Student, Atmospheric Science, Colorado State University
>>>>>> B.S. Applied Computational Physics, Carnegie Mellon University, 2009
>>>>>> chris.eldred at gmail.com / celdred at atmos.colostate.edu
>>>>>>
>>>>>
>>>>>
>>>>
>>>>
>>>> --
>>>> Chris Eldred
>>>> DOE Computational Science Graduate Fellow
>>>> Graduate Student, Atmospheric Science, Colorado State University
>>>> B.S. Applied Computational Physics, Carnegie Mellon University, 2009
>>>> chris.eldred at gmail.com / celdred at atmos.colostate.edu
>>>>
>>>
>>>
>>
>>
>> --
>> Chris Eldred
>> DOE Computational Science Graduate Fellow
>> Graduate Student, Atmospheric Science, Colorado State University
>> B.S. Applied Computational Physics, Carnegie Mellon University, 2009
>> chris.eldred at gmail.com / celdred at atmos.colostate.edu
>>
>
>
>
> --
> Chris Eldred
> DOE Computational Science Graduate Fellow
> Graduate Student, Atmospheric Science, Colorado State University
> B.S. Applied Computational Physics, Carnegie Mellon University, 2009
> chris.eldred at gmail.com / celdred at atmos.colostate.edu
>
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