[MOAB-dev] moab compilation errors with recent nek version

Thu Jul 10 11:21:25 CDT 2014

Ah true, forgot about the implicit none.

Prasad, I'll fix this and push it to nek repo by afternoon. I was able
to replicate it locally with updated sources.

Vijay

On Thu, Jul 10, 2014 at 11:07 AM, Tim Tautges
<timothy.tautges at cd-adapco.com> wrote:
> Vijay,
>   This is due to MOAB's include file in nek having an 'implicit none'
> statement, then including a Nek include file which uses an implicitly typed
> variable (common/IOFLAG/nio).  I think in that same moab include file in
> nek, there are type statements for all the implicitly-typed nek variables,
> and nio needs to be added to that.
>
> Or, Nek could forego all that extra debugging it has to do by stopping its
> use of implicit typing (sorry, but it's true).
>
> - tim
>
>
> On 07/10/2014 10:54 AM, Vijay S. Mahadevan wrote:
>>
>> Prasad, I don't see any MOAB related compilation errors here. Are you
>> sure the problem setup (SIZE) is correct ? I haven't seen any problems
>> with NEK+MOAB on blues before.
>>
>> If you can send the entire make.log, we can help you find the actual
>> cause. For problem setup related queries, please contact the NEK list.
>>
>> Vijay
>>
>> On Thu, Jul 10, 2014 at 10:38 AM, Vegendla, Surya Narayana Prasad
>> <svegendla at anl.gov> wrote:
>>>
>>> Hi all,
>>>
>>>
>>>
>>> I seen the following error messages while compiling moab_conjht on
>>> blues/mira with recent nek version.
>>>
>>> Here I am posting error messages, let me know how to avoid these
>>> compilation
>>> problems.
>>>
>>>
>>>
>>> Thanks,
>>>
>>> Prasad
>>>
>>>
>>>
>>> mpif77 -f77=ifort -c  -O2 -r8 -fpconstant -fpp -DMOAB -DPTRSIZE8 -DMPI
>>> -DLONGINT8 -DUNDERSCORE -DGLOBAL_LONG_LONG
>>> -I/home/svegendla/nekFiles/moab_conjht
>>> -I/home/svegendla/nek5_svn/trunk/nek
>>> -I./ -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map
>>> -DHAVE_UNORDERED_SET=tr1/unordered_set
>>> -I/soft/netcdf/4.0.1-intel-11-serial/include
>>> -I/home/jain/lib/hdf5-1.8.7//include -isystem
>>> /home/jain/lib/hdf5-1.8.7//include  -DTEMPLATE_SPECIALIZATION
>>> -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64
>>> -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DCGM
>>> -I/home/jain/install/opt_moab//include
>>> /home/svegendla/nek5_svn/trunk/nek/3rd_party/moab.f -o obj/moab.o
>>> mpicc -cc=icc -c  -O2 -DMOAB -DPTRSIZE8 -DMPI -DLONGINT8 -DUNDERSCORE
>>> -DGLOBAL_LONG_LONG  -DPREFIX=jl_
>>> /home/svegendla/nek5_svn/trunk/nek/jl/comm.c -o obj/jl_comm.o
>>> mpicc -cc=icc -c  -O2 -DMOAB -DPTRSIZE8 -DMPI -DLONGINT8 -DUNDERSCORE
>>> -DGLOBAL_LONG_LONG  -DPREFIX=jl_
>>> /home/svegendla/nek5_svn/trunk/nek/jl/tensor.c -o obj/jl_tensor.o
>>> mpicc -cc=icc -c  -O2 -DMOAB -DPTRSIZE8 -DMPI -DLONGINT8 -DUNDERSCORE
>>> -DGLOBAL_LONG_LONG  -DPREFIX=jl_
>>> /home/svegendla/nek5_svn/trunk/nek/jl/fail.c -o obj/jl_fail.o
>>> /home/svegendla/nek5_svn/trunk/nek/jl/fail.c(18): warning #1628: function
>>> declared with "noreturn" does return
>>>    }
>>>    ^
>>>
>>> mpicc -cc=icc -c  -O2 -DMOAB -DPTRSIZE8 -DMPI -DLONGINT8 -DUNDERSCORE
>>> -DGLOBAL_LONG_LONG  -DPREFIX=jl_
>>> /home/svegendla/nek5_svn/trunk/nek/jl/fcrystal.c -o obj/jl_fcrystal.o
>>> mpicc -cc=icc -c  -O2 -DMOAB -DPTRSIZE8 -DMPI -DLONGINT8 -DUNDERSCORE
>>> -DGLOBAL_LONG_LONG  -DPREFIX=jl_
>>> /home/svegendla/nek5_svn/trunk/nek/jl/findpts.c -o obj/jl_findpts.o
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> mpicc -cc=icc -c  -O2 -DMOAB -DPTRSIZE8 -DMPI -DLONGINT8 -DUNDERSCORE
>>> -DGLOBAL_LONG_LONG  -DPREFIX=jl_
>>> /home/svegendla/nek5_svn/trunk/nek/jl/findpts_local.c -o
>>> obj/jl_findpts_local.o
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> mpicc -cc=icc -c  -O2 -DMOAB -DPTRSIZE8 -DMPI -DLONGINT8 -DUNDERSCORE
>>> -DGLOBAL_LONG_LONG  -DPREFIX=jl_
>>> /home/svegendla/nek5_svn/trunk/nek/jl/obbox.c -o obj/jl_obbox.o
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>       common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> ./SIZE(126): error #6404: This name does not have a type, and must have
>>> an
>>> explicit type.   [NIO]
>>>        common/IOFLAG/nio  ! for logfile verbosity control
>>> --------------------^
>>> /tmp/ifortnacSYu.i(21993): catastrophic error: Too many errors, exiting
>>> compilation aborted for
>>> /home/svegendla/nek5_svn/trunk/nek/3rd_party/moab.f
>>> (code 1)
>>> make: *** [obj/moab.o] Error 1
>>> make: *** Waiting for unfinished jobs....
>>>
>>>
>>>
>>>
>>>
>>>
>
> --
> Timothy J. Tautges
> Manager, Directed Meshing, CD-adapco
> Phone: 608-354-1459
> timothy.tautges at cd-adapco.com