[MOAB-dev] Build failed in Jenkins: moab_serial #343

Thu Jun 12 16:03:31 CDT 2014

See <https://jenkins-ci.mcs.anl.gov/job/moab_serial/343/changes>

Changes:

[wuda] Renamed a few member functions of NCHelper classes (e.g. read_variable_setup => read_variables_setup).

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C:   gcc  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG  -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set
C++: g++  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG  -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set
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make  all-recursive
make[1]: Entering directory `<https://jenkins-ci.mcs.anl.gov/job/moab_serial/ws/'>
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rm -f stamp-h5
touch FCDefs.h.in
cd .. && /bin/sh ./config.status src/FCDefs.h
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make  all-recursive
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/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src  -I/homes/fathom/3rdparty/netcdf/4.3.2/gnu/include -I/homes/fathom/3rdparty/zlib/1.2.8/gcc/include -I/homes/fathom/3rdparty/hdf5/1.8.12/gnu/include    -I/homes/fathom/3rdparty/hdf5/1.8.12/gnu/include -isystem /homes/fathom/3rdparty/hdf5/1.8.12/gnu/include  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel  -I./mhdf/include  -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -MT ReadNC.lo -MD -MP -MF .deps/ReadNC.Tpo -c -o ReadNC.lo ReadNC.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/homes/fathom/3rdparty/netcdf/4.3.2/gnu/include -I/homes/fathom/3rdparty/zlib/1.2.8/gcc/include -I/homes/fathom/3rdparty/hdf5/1.8.12/gnu/include -I/homes/fathom/3rdparty/hdf5/1.8.12/gnu/include -isystem /homes/fathom/3rdparty/hdf5/1.8.12/gnu/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -MT ReadNC.lo -MD -MP -MF .deps/ReadNC.Tpo -c ReadNC.cpp -o ReadNC.o
mv -f .deps/ReadNC.Tpo .deps/ReadNC.Plo
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src  -I/homes/fathom/3rdparty/netcdf/4.3.2/gnu/include -I/homes/fathom/3rdparty/zlib/1.2.8/gcc/include -I/homes/fathom/3rdparty/hdf5/1.8.12/gnu/include    -I/homes/fathom/3rdparty/hdf5/1.8.12/gnu/include -isystem /homes/fathom/3rdparty/hdf5/1.8.12/gnu/include  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel  -I./mhdf/include  -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -MT NCHelper.lo -MD -MP -MF .deps/NCHelper.Tpo -c -o NCHelper.lo NCHelper.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -I/homes/fathom/3rdparty/netcdf/4.3.2/gnu/include -I/homes/fathom/3rdparty/zlib/1.2.8/gcc/include -I/homes/fathom/3rdparty/hdf5/1.8.12/gnu/include -I/homes/fathom/3rdparty/hdf5/1.8.12/gnu/include -isystem /homes/fathom/3rdparty/hdf5/1.8.12/gnu/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I.. -I./.. -I./../parallel -I./mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -MT NCHelper.lo -MD -MP -MF .deps/NCHelper.Tpo -c NCHelper.cpp -o NCHelper.o
NCHelper.cpp: In static member function 'static moab::NCHelper* moab::NCHelper::get_nc_helper(moab::ReadNC*, int, const moab::FileOptions&, moab::EntityHandle)':
NCHelper.cpp:51:75: error: cannot allocate an object of abstract type 'moab::NCHelperMPAS'
NCHelperMPAS.hpp:17:7: note:   because the following virtual functions are pure within 'moab::NCHelperMPAS':
NCHelper.hpp:206:21: note: 	virtual moab::ErrorCode moab::UcdNCHelper::read_ucd_variables_to_nonset(std::vector<moab::ReadNC::VarData>&, std::vector<int>&)
make[5]: *** [NCHelper.lo] Error 1
make[5]: Leaving directory `<https://jenkins-ci.mcs.anl.gov/job/moab_serial/ws/src/io'>
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make[2]: *** [all] Error 2
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make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `<https://jenkins-ci.mcs.anl.gov/job/moab_serial/ws/'>
make: *** [all] Error 2
Build step 'Execute shell' marked build as failure