[MOAB-dev] commit/MOAB: 3 new changesets
commits-noreply at bitbucket.org
commits-noreply at bitbucket.org
Thu May 22 22:54:17 CDT 2014
3 new commits in MOAB:
https://bitbucket.org/fathomteam/moab/commits/0140e2601157/
Changeset: 0140e2601157
Branch: None
User: iulian07
Date: 2014-05-22 23:10:03
Summary: Merge branch 'master' into Version4.6
Conflicts:
tools/mbcoupler/ElemUtil.hpp
Affected #: 374 files
diff --git a/.gitignore b/.gitignore
index 6d29b5e..073629d 100644
--- a/.gitignore
+++ b/.gitignore
@@ -1,97 +1,141 @@
-MOABConfig.cmake
-moab.files
-config/test-driver
-moab.config
-moab.includes
-moab.creator*
-*.ccm
-*.cub
+*~
+*.a
aclocal.m4
autom4te.cache/
-config.h
-config.h.in
-config.log
-config.lt
-config.status
+bin
+bin/*
+*.ccm
config/config.guess
config/config.sub
config/depcomp
+config.h
+config.h.in
config/install-sh
config/libtool.m4
+config.log
+config.lt
config/ltmain.sh
+config/lt~obsolete.m4
config/ltoptions.m4
config/ltsugar.m4
config/ltversion.m4
-config/lt~obsolete.m4
config/missing
+config.status
+config/test-driver
configure
+.cproject
+*.cub
+cubit??.jou
+.deps
doc/config.tex
doc/dev.dox
-doc/user.dox
doc/user/*
+doc/user.dox
+examples/CrystalRouterExample
+examples/DeformMeshRemap
+examples/DirectAccessNoHoles
+examples/DirectAccessNoHolesF90
+examples/DirectAccessWithHoles
examples/examples.make
+examples/freem.mod
+examples/GetEntities
+examples/*.h5m
+examples/HelloMOAB
+examples/HelloParMOAB
+examples/itaps/FindConnectF
+examples/itaps/ListSetsNTagsCXX
+examples/itaps/ListSetsNTagsF90
+examples/itaps/TagIterateC
+examples/itaps/TagIterateF
+examples/LloydRelaxation
+examples/LoadPartial
+examples/point_in_elem_search
+examples/PushParMeshIntoMoabF90
+examples/ReduceExchangeTags
+examples/SetsNTags
+examples/structuredmesh
+examples/StructuredMeshSimple
+examples/TestExodusII
+history??.jou
+hpctoolkit-*
+*.hpcstruct
+include
+include/*
itaps/iBase_f.h
itaps/igeom/FBiGeom-Defs.inc
+itaps/igeom/FBiGeom_protos.h
+itaps/igeom/testgeom
+itaps/igeom/testSmooth2
+itaps/igeom/testSmoothGeom
+itaps/imesh/FindAdjacencyF90
itaps/imesh/iMesh-Defs.inc
+itaps/imesh/iMesh_extensions_protos.h
itaps/imesh/iMeshP_extensions_protos.h
itaps/imesh/iMeshP_protos.h
-itaps/imesh/iMesh_extensions_protos.h
itaps/imesh/iMesh_protos.h
+itaps/imesh/MOAB_iMesh_extensions_tests
+itaps/imesh/MOAB_iMeshP_unit_tests
+itaps/imesh/MOAB_iMesh_unit_tests
+itaps/imesh/partest
+itaps/imesh/ScdMeshF77
+itaps/imesh/ScdMeshF90
+itaps/imesh/testc_cbind
+*.la
+*.lai
+lib
+lib/*
+.libs
libtool
+*.lo
+*.log
+makefile
+Makefile
+*/Makefile
+*/**/Makefile
+*/**/Makefile.in
+*/Makefile.in
+Makefile.in
+moab.config
+MOABConfig.cmake
+moab.creator*
+moab.files
+moab.includes
moab.make
+*.o
+.project
+*.rej
+share/*
+share/doc/moab
+share/man/man1
+*.so
src/FCDefs.h
+src/io/mhdf/h5minfo
+src/io/mhdf/h5mvalidate
src/MBCN_protos.h
-src/MOAB_FCDefs.h
src/moab/EntityHandle.hpp
-src/moab/Version.h
+src/MOAB_FCDefs.h
src/moab/stamp-h2
src/moab/stamp-h3
+src/moab/Version.h
src/parallel/moab_mpi_config.h
src/parallel/stamp-h4
src/stamp-h5
stamp-h1
-tools/mbcoupler/tests/
-tools/mbzoltan/Config.moab
-tools/vtkMOABReader/CMakeLists.txt
-tools/vtkMOABReaderNew/CMakeLists.txt
-.deps
-Makefile.in
-Makefile
-*/Makefile.in
-*/Makefile
-*/**/Makefile.in
-*/**/Makefile
-.libs
-*.o
-*.log
-*.lo
-*.la
-*.a
-*.so
-include/*
-lib/*
-share/*
-bin/*
-*~
-examples/HelloMoabPar
-examples/TestExodusII
-itaps/igeom/FBiGeom_protos.h
-itaps/igeom/testSmooth2
-itaps/igeom/testSmoothGeom
-itaps/igeom/testgeom
-itaps/imesh/FindAdjacencyF90
-itaps/imesh/MOAB_iMeshP_unit_tests
-itaps/imesh/ScdMeshF77
-itaps/imesh/ScdMeshF90
-itaps/imesh/partest
test/adaptive_kd_tree_tests
test/bsp_tree_poly_test
test/bsp_tree_test
-test/*.gen
+test/CMakeLists.txt
test/coords_connect_iterate
test/cropvol_test
+test/dagmc/dagmc_pointinvol_test
+test/dagmc/dagmc_rayfire_test
+test/dagmc/dagmc_simple_test
test/dual/dual_test
+test/elem_eval_test
test/file_options_test
+test/*.h5m
+test/*.g
+test/*.gen
test/geom_util_test
test/gttool_test
test/h5file/dump_sets
@@ -102,15 +146,24 @@ test/h5file/h5regression
test/h5file/h5sets_test
test/h5file/h5test
test/h5file/h5varlen
-test/*.g
test/homxform_test
+test/io/*.ccmg
+test/io/ccmio_test
test/io/cub_file_test
test/io/exodus_test
+test/io/*.h5m
+test/io/*.g
test/io/gmsh_test
test/io/ideas_test
-test/io/*.g
test/io/nastran_test
-test/io/read_cgm_test
+test/io/*.nc
+test/io/read_cgm_basic_test
+test/io/read_cgm_connectivity_test
+test/io/read_cgm_group_test
+test/io/read_cgm_load_test
+test/io/read_cgm_senses_test
+test/io/read_gcrm_nc
+test/io/read_mpas_nc
test/io/read_nc
test/io/read_ucd_nc
test/io/readutil_test
@@ -118,12 +171,15 @@ test/io/smf_test
test/io/stl_test
test/io/tqdcfr
test/io/vtk_test
+test/io/write_nc
test/kd_tree_test
test/kd_tree_time
test/kd_tree_tool
+test/lloyd_smoother_test
test/mbcn_test
test/mbfacet_test
test/mbground_test
+test/mergemesh_test
test/mesh_set_test
test/moab_test
test/obb/obb_test
@@ -131,15 +187,20 @@ test/obb/obb_time
test/obb/obb_tree_tool
test/obb_test
test/oldinc/test_oldinc
+test/parallel/gcrm_par
test/parallel/*.h5m
-test/parallel/*.vtk
test/parallel/mbparallelcomm_test
test/parallel/mhdf_parallel
+test/parallel/mpastrvpart
+test/parallel/*.nc
test/parallel/par_coupler_test
test/parallel/par_intx_sph
test/parallel/parallel_hdf5_test
test/parallel/parallel_unit_tests
test/parallel/parallel_write_test
+test/parallel/par_coupler_test
+test/parallel/par_intx_sph
+test/parallel/par_spatial_locator_test
test/parallel/parmerge
test/parallel/partcheck
test/parallel/pcomm_serial
@@ -150,38 +211,80 @@ test/parallel/scdtest
test/parallel/structured3
test/parallel/uber_parallel_test
test/parallel/ucdtrvpart
+test/parallel/*.vtk
+test/parallel/write_nc_par
test/perf/adj_time
test/perf/perf
test/perf/perftool
+test/perf/point_in_elem
+test/perf/runtest
test/perf/seqperf
test/perf/tstt_perf_binding
+test/perf/point_location/elem_eval_time
+test/perf/point_location/point_location
+test/perf/point_location/sploc_searching_perf
+test/perf/point_location/tree_searching_perf
test/range_test
test/reorder_test
test/scdseq_test
+test/scd_test_partn
test/seq_man_test
+test/spatial_locator_test
+test/test_boundbox
test/tag_test
test/test_adj
test/test_prog_opt
+test/TestRunner.hpp
test/var_len_test
test/var_len_test_no_template
test/xform_test
+tools/dagmc/dagmc_preproc
tools/dagmc/pt_vol_test
+tools/dagmc/quads_to_tris
tools/dagmc/ray_fire_test
tools/dagmc/test_geom
tools/dagmc/update_coords
+tools/hexmodops
+tools/mbconvert
tools/mbcoupler/*.h5m
+tools/mbcoupler/*.g
+tools/mbcoupler/tests/
+tools/mbcslam/advection
tools/mbcslam/case1_test
+tools/mbcslam/create_dp
+tools/mbcslam/cslam_par_test
+tools/mbcslam/diffusion
tools/mbcslam/intersect1.h5m
-tools/mbcslam/intx.vtk
tools/mbcslam/intx1.vtk
+tools/mbcslam/intx_imesh
tools/mbcslam/intx_in_plane_test
+tools/mbcslam/intx_mpas
tools/mbcslam/intx_on_sphere_test
+tools/mbcslam/intx.vtk
tools/mbcslam/lagr.h5m
-tools/mbcslam/spec_visu_test
+tools/mbcslam/lagrIni.h5m
tools/mbcslam/spectral.vtk
+tools/mbcslam/spec_visu_test
tools/mbcslam/spherical_area_test
-.project
-.cproject
-examples/*.h5m
-examples/ReduceExchangeTags
-
+tools/mbcslam/polyWithEdges.vtk
+tools/mbcslam/proj1
+tools/mbdepth
+tools/mbgsets
+tools/mbmem
+tools/mbsize
+tools/mbskin
+tools/mbsurfplot
+tools/mbtagprop
+tools/mbzoltan/Config.moab
+tools/spheredecomp
+tools/vtkMOABReader/CMakeLists.txt
+tools/vtkMOABReaderNew/CMakeLists.txt
+tools/vtkMOABReaderNew/CMakeCache.txt
+tools/vtkMOABReaderNew/CMakeFiles/*
+tools/vtkMOABReaderNew/cmake_install.cmake
+tools/vtkMOABReaderNew/vtkMoabReaderPlugin.qrc
+tools/vtkMOABReaderNew/vtkMoabReaderPluginInit.cxx
+tools/vtkMOABReaderNew/vtkMoabReaderPlugin_Plugin.cxx
+tools/vtkMOABReaderNew/vtkMoabReaderPlugin_Plugin.h
+tools/vtkMOABReaderNew/vtkSMvtkMoabReaderPluginInstantiator.cxx
+tools/vtkMOABReaderNew/vtkSMvtkMoabReaderPluginInstantiator.h
diff --git a/CMakeLists.txt b/CMakeLists.txt
index 3774046..6b18435 100644
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -1,3 +1,9 @@
+# check if we are using MPI - reset compilers accordingly
+if ( MOAB_USE_MPI )
+ SET(CMAKE_CXX_COMPILER ${MPI_CXX_COMPILER})
+ SET(CMAKE_C_COMPILER ${MPI_C_COMPILER})
+endif ( MOAB_USE_MPI )
+
project( MOAB )
cmake_minimum_required( VERSION 2.4 )
@@ -100,7 +106,30 @@ project( MOAB )
# iMesh
option ( MOAB_BUILD_IMESH "Build the iMesh interface?" ON )
+ # check for MPI package
+ if ( MOAB_USE_MPI )
+ find_package( MPI )
+ # CMake FindMPI script is sorely lacking:
+ if ( MPI_LIBRARY AND MPI_INCLUDE_PATH )
+ set( MPI_FOUND 1 )
+ endif ( MPI_LIBRARY AND MPI_INCLUDE_PATH )
+
+ if ( MPI_FOUND )
+ set ( MOAB_DEFINES "${MOAB_DEFINES} -DUSE_MPI" )
+ endif ( MPI_FOUND )
+ endif ( MOAB_USE_MPI )
+
+ if ( MOAB_USE_NETCDF )
+ find_package( NetCDF )
+ endif ( MOAB_USE_NETCDF )
+
+ if ( MOAB_USE_HDF )
+ # HDF5
+ find_package( HDF5 )
+ endif ( MOAB_USE_HDF )
+
add_subdirectory( src )
+ add_subdirectory( itaps/imesh )
add_subdirectory( tools )
add_subdirectory( test )
-
+
diff --git a/Makefile.am b/Makefile.am
index 1c91622..b8c3c9e 100644
--- a/Makefile.am
+++ b/Makefile.am
@@ -48,7 +48,7 @@ install-data-hook:
echo -n "SET(MOAB_LIBRARIES \"" >> $(DESTDIR)$(cfgdir)/MOABConfig.cmake
# next line: get the post-substitution set of link commands, then filter out leading
# and trailing spaces, then terminate with close-quote and close-paren
- echo -n "@EXPORT_LDFLAGS@ -L$(MOAB_LIBDIR) -lMOAB @LIBS@ @PNETCDF_LIBS@ @NETCDF_LIBS@ @HDF5_LIBS@ @CCMIO_LIBS@ @CGM_LIBS@" | \
+ echo -n "@EXPORT_LDFLAGS@ -L$(libdir) -lMOAB @LIBS@ @PNETCDF_LIBS@ @NETCDF_LIBS@ @CGNS_LIBS@ @HDF5_LIBS@ @CCMIO_LIBS@ @CGM_LIBS@" | \
sed -e 's/^ *//;s/ *$$/\")\n/' >> $(DESTDIR)$(cfgdir)/MOABConfig.cmake
# Generate a file to be installed in $libdir containing the configuration
diff --git a/MeshFiles/unittest/125hex.g b/MeshFiles/unittest/125hex.g
index 6cf0433..2042583 100644
Binary files a/MeshFiles/unittest/125hex.g and b/MeshFiles/unittest/125hex.g differ
diff --git a/MeshFiles/unittest/16_unmerged_hex.h5m b/MeshFiles/unittest/16_unmerged_hex.h5m
new file mode 100644
index 0000000..2ebde86
Binary files /dev/null and b/MeshFiles/unittest/16_unmerged_hex.h5m differ
diff --git a/MeshFiles/unittest/1hex.g b/MeshFiles/unittest/1hex.g
index 3dcd658..0affc6e 100644
Binary files a/MeshFiles/unittest/1hex.g and b/MeshFiles/unittest/1hex.g differ
diff --git a/MeshFiles/unittest/1khex.g b/MeshFiles/unittest/1khex.g
index e6c9417..6b0a8fc 100644
Binary files a/MeshFiles/unittest/1khex.g and b/MeshFiles/unittest/1khex.g differ
diff --git a/MeshFiles/unittest/64bricks_512hex_256part.h5m b/MeshFiles/unittest/64bricks_512hex_256part.h5m
new file mode 100644
index 0000000..d7df13c
Binary files /dev/null and b/MeshFiles/unittest/64bricks_512hex_256part.h5m differ
diff --git a/MeshFiles/unittest/Makefile.am b/MeshFiles/unittest/Makefile.am
index f347315..bc4f522 100644
--- a/MeshFiles/unittest/Makefile.am
+++ b/MeshFiles/unittest/Makefile.am
@@ -1,6 +1,7 @@
-SUBDIRS = io
+SUBDIRS = io dagmc iGeom
EXTRA_DIST = 125hex.g \
+ 16_unmerged_hex.h5m \
1hex.g \
1khex.g \
1tet.g \
@@ -21,6 +22,8 @@ EXTRA_DIST = 125hex.g \
testtet.g \
ptest.cub \
64bricks_512hex.h5m \
+ 64bricks_1khex.h5m\
+ 64bricks_12ktet.h5m\
partBed.smf \
PB.h5m \
polyPB.txt \
@@ -28,5 +31,8 @@ EXTRA_DIST = 125hex.g \
quads.h5m \
SECrop2.h5m \
poly14.txt \
- BedCrop2.h5m
+ BedCrop2.h5m \
+ mpas_p8.h5m \
+ Homme_2pt.h5m \
+ surfrandomtris-4part.h5m
diff --git a/MeshFiles/unittest/dagmc/Makefile.am b/MeshFiles/unittest/dagmc/Makefile.am
new file mode 100644
index 0000000..0643ad9
--- /dev/null
+++ b/MeshFiles/unittest/dagmc/Makefile.am
@@ -0,0 +1 @@
+EXTRA_DIST = test_geom.h5m
diff --git a/MeshFiles/unittest/dagmc/test_geom.h5m b/MeshFiles/unittest/dagmc/test_geom.h5m
new file mode 100644
index 0000000..18e1d36
Binary files /dev/null and b/MeshFiles/unittest/dagmc/test_geom.h5m differ
diff --git a/MeshFiles/unittest/iGeom/Makefile.am b/MeshFiles/unittest/iGeom/Makefile.am
new file mode 100644
index 0000000..203b676
--- /dev/null
+++ b/MeshFiles/unittest/iGeom/Makefile.am
@@ -0,0 +1 @@
+EXTRA_DIST = shell.h5m
diff --git a/MeshFiles/unittest/io/2d_naca0012.cgns b/MeshFiles/unittest/io/2d_naca0012.cgns
new file mode 100644
index 0000000..4ce0452
Binary files /dev/null and b/MeshFiles/unittest/io/2d_naca0012.cgns differ
diff --git a/MeshFiles/unittest/io/Makefile.am b/MeshFiles/unittest/io/Makefile.am
index ece20cf..94704c1 100644
--- a/MeshFiles/unittest/io/Makefile.am
+++ b/MeshFiles/unittest/io/Makefile.am
@@ -2,10 +2,16 @@ EXTRA_DIST = HommeMapping.nc \
brick_cubit10.1.cub \
brick_cubit10.2.cub \
brick_cubit10.cub \
- camEul26x48x96.t3.nc \
+ eul26x48x96.t0.nc \
+ eul26x48x96.t1.nc \
+ eul26x48x96.t2.nc \
+ eul26x48x96.t.3.nc \
+ fv26x46x72.t.3.nc \
cubtest12.cub \
+ cubtest14.cub \
cubtest.jou \
dum.sat \
+ dum.stp \
gmsh2.msh \
hex_2x2x2_ss.exo \
ho_test.g \
@@ -17,6 +23,12 @@ EXTRA_DIST = HommeMapping.nc \
test.nas \
test.unv \
sample.stl \
- three.smf
-
+ three.smf \
+ mpasx1.642.t.2.nc \
+ 2d_naca0012.cgns \
+ cube.sat \
+ cube.stp \
+ cylcube.sat \
+ cylcube.stp \
+ gcrm_r3.nc
diff --git a/MeshFiles/unittest/io/camEul26x48x96.t3.nc b/MeshFiles/unittest/io/camEul26x48x96.t3.nc
deleted file mode 100644
index fafba2a..0000000
Binary files a/MeshFiles/unittest/io/camEul26x48x96.t3.nc and /dev/null differ
diff --git a/MeshFiles/unittest/io/cube.sat b/MeshFiles/unittest/io/cube.sat
new file mode 100644
index 0000000..58fd508
--- /dev/null
+++ b/MeshFiles/unittest/io/cube.sat
@@ -0,0 +1,117 @@
+1900 0 1 0
+10 Cubit 12.2 17 ACIS 19.0.2 Linux 24 Mon Jan 6 14:16:03 2014
+1 9.9999999999999995e-07 1e-10
+body $1 -1 -1 $-1 $2 $-1 $-1 T -5 -5 -5 5 5 5 #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $-1 $-1 $0 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 1 #
+lump $3 -1 -1 $-1 $-1 $4 $0 T -5 -5 -5 5 5 5 #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $-1 $-1 $2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 1 #
+shell $-1 -1 -1 $-1 $-1 $-1 $5 $-1 $2 T -5 -5 -5 5 5 5 #
+face $6 -1 -1 $-1 $7 $8 $4 $-1 $9 forward single T -5 -5 5 5 5 5 F #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $-1 $-1 $5 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 1 #
+face $10 -1 -1 $-1 $11 $12 $4 $-1 $13 reversed single T -5 -5 -5 5 5 -5 F #
+loop $-1 -1 -1 $-1 $-1 $14 $5 T -5 -5 5 5 5 5 unknown #
+plane-surface $-1 -1 -1 $-1 0 0 5 0 0 1 1 0 0 forward_v I I I I #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $-1 $-1 $7 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 2 #
+face $15 -1 -1 $-1 $16 $17 $4 $-1 $18 reversed single T -5 -5 -5 5 -5 5 F #
+loop $-1 -1 -1 $-1 $-1 $19 $7 T -5 -5 -5 5 5 -5 unknown #
+plane-surface $-1 -1 -1 $-1 0 0 -5 0 0 1 1 0 0 forward_v I I I I #
+coedge $-1 -1 -1 $-1 $20 $21 $22 $23 forward $8 $-1 #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $-1 $-1 $11 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 3 #
+face $24 -1 -1 $-1 $25 $26 $4 $-1 $27 reversed single T -5 -5 -5 -5 5 5 F #
+loop $-1 -1 -1 $-1 $-1 $28 $11 T -5 -5 -5 5 -5 5 unknown #
+plane-surface $-1 -1 -1 $-1 0 -5 0 0 1 -0 -0 0 1 forward_v I I I I #
+coedge $-1 -1 -1 $-1 $29 $30 $31 $32 forward $12 $-1 #
+coedge $-1 -1 -1 $-1 $33 $14 $34 $35 forward $8 $-1 #
+coedge $-1 -1 -1 $-1 $14 $33 $36 $37 forward $8 $-1 #
+coedge $-1 -1 -1 $-1 $38 $39 $14 $23 reversed $40 $-1 #
+edge $41 -1 -1 $-1 $42 -5 $43 5 $22 $44 forward @7 unknown T 5 -5 5 5 5 5 #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $-1 $-1 $16 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 4 #
+face $45 -1 -1 $-1 $46 $47 $4 $-1 $48 reversed single T -5 5 -5 5 5 5 F #
+loop $-1 -1 -1 $-1 $-1 $49 $16 T -5 -5 -5 -5 5 5 unknown #
+plane-surface $-1 -1 -1 $-1 -5 0 0 1 0 0 0 0 -1 forward_v I I I I #
+coedge $-1 -1 -1 $-1 $50 $36 $51 $52 forward $17 $-1 #
+coedge $-1 -1 -1 $-1 $53 $19 $50 $54 forward $12 $-1 #
+coedge $-1 -1 -1 $-1 $19 $53 $55 $56 forward $12 $-1 #
+coedge $-1 -1 -1 $-1 $39 $38 $19 $32 reversed $40 $-1 #
+edge $57 -1 -1 $-1 $58 -5 $59 5 $31 $60 forward @7 unknown T 5 -5 -5 5 5 -5 #
+coedge $-1 -1 -1 $-1 $21 $20 $61 $62 forward $8 $-1 #
+coedge $-1 -1 -1 $-1 $63 $64 $20 $35 reversed $47 $-1 #
+edge $65 -1 -1 $-1 $43 -5 $66 5 $34 $67 forward @7 unknown T -5 5 5 5 5 5 #
+coedge $-1 -1 -1 $-1 $28 $68 $21 $37 reversed $17 $-1 #
+edge $69 -1 -1 $-1 $70 -5 $42 5 $36 $71 forward @7 unknown T -5 -5 5 5 -5 5 #
+coedge $-1 -1 -1 $-1 $31 $22 $68 $72 forward $40 $-1 #
+coedge $-1 -1 -1 $-1 $22 $31 $63 $73 reversed $40 $-1 #
+loop $-1 -1 -1 $-1 $-1 $38 $46 T 5 -5 -5 5 5 5 unknown #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $-1 $-1 $23 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 1 #
+vertex $74 -1 -1 $-1 $23 $75 #
+vertex $76 -1 -1 $-1 $23 $77 #
+straight-curve $-1 -1 -1 $-1 5 0 5 0 1 0 I I #
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diff --git a/MeshFiles/unittest/io/cube.stp b/MeshFiles/unittest/io/cube.stp
new file mode 100644
index 0000000..c17645d
--- /dev/null
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diff --git a/MeshFiles/unittest/io/cubtest14.cub b/MeshFiles/unittest/io/cubtest14.cub
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index 0000000..ae88269
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diff --git a/MeshFiles/unittest/io/cylcube.sat b/MeshFiles/unittest/io/cylcube.sat
new file mode 100644
index 0000000..0b65976
--- /dev/null
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+simple-snl-attrib $-1 -1 $-1 $22 $6 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 7 @16 GRAPHICS_OPTIONS @14 geometry color @10 mesh color @19 geometry visibility @15 mesh visibility @11 render mode @11 transparent 0 6 5 5 1 1 0 0 #
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+integer_attrib-name_attrib-gen-attrib $-1 -1 $54 $-1 $24 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 8 #
+face $55 -1 -1 $-1 $-1 $56 $12 $-1 $57 forward single T -5 -5 5 5 5 5 F #
+loop $-1 -1 -1 $-1 $-1 $58 $24 T -5 -5 -5 5 5 -5 unknown #
+plane-surface $-1 -1 -1 $-1 0 0 -5 0 0 -1 -1 0 0 forward_v I I I I #
+loop $-1 -1 -1 $-1 $-1 $59 $16 T -5 -5 5 5 5 5 unknown #
+coedge $-1 -1 -1 $-1 $41 $41 $58 $60 reversed $25 $-1 #
+simple-snl-attrib $-1 -1 $-1 $28 $14 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 3 @13 MESH_INTERVAL @4 LIMP @4 LIMP 2 1 0 5 1 0 0 1 1 #
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+integer_attrib-name_attrib-gen-attrib $-1 -1 $62 $-1 $30 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 3 #
+face $63 -1 -1 $-1 $64 $65 $9 $-1 $66 reversed single T 25 -5 -5 25 5 5 F #
+loop $-1 -1 -1 $-1 $-1 $67 $30 T 25 -5 -5 35 -5 5 unknown #
+plane-surface $-1 -1 -1 $-1 30 -5 0 0 1 0 0 0 1 forward_v I I I I #
+coedge $-1 -1 -1 $-1 $68 $69 $70 $71 forward $31 $-1 #
+coedge $-1 -1 -1 $-1 $72 $33 $73 $74 forward $20 $-1 #
+coedge $-1 -1 -1 $-1 $33 $72 $75 $76 forward $20 $-1 #
+coedge $-1 -1 -1 $-1 $77 $78 $33 $52 reversed $79 $-1 #
+edge $80 -1 -1 $-1 $81 -5 $82 5 $51 $83 forward @7 unknown T 35 -5 5 35 5 5 #
+simple-snl-attrib $-1 -1 $-1 $35 $16 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 3 @13 MESH_INTERVAL @4 LIMP @4 LIMP 2 1 0 5 1 0 0 1 1 #
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+integer_attrib-name_attrib-gen-attrib $-1 -1 $85 $-1 $37 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 9 #
+loop $-1 -1 -1 $-1 $-1 $86 $37 T -5 -5 5 5 5 5 unknown #
+plane-surface $-1 -1 -1 $-1 0 0 5 0 0 1 1 0 0 forward_v I I I I #
+coedge $-1 -1 -1 $-1 $58 $58 $41 $60 forward $38 $-1 #
+coedge $-1 -1 -1 $-1 $59 $59 $86 $87 reversed $40 $-1 #
+edge $88 -1 -1 $-1 $89 0 $89 6.2831853071795862 $58 $90 forward @7 unknown T -5 -5 -5 5 5 -5 #
+simple-snl-attrib $-1 -1 $-1 $43 $19 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 3 @13 MESH_INTERVAL @4 LIMP @4 LIMP 2 1 0 5 1 0 0 1 1 #
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+integer_attrib-name_attrib-gen-attrib $-1 -1 $92 $-1 $45 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 4 #
+face $93 -1 -1 $-1 $94 $95 $9 $-1 $96 reversed single T 25 5 -5 35 5 5 F #
+loop $-1 -1 -1 $-1 $-1 $97 $45 T 25 -5 -5 25 5 5 unknown #
+plane-surface $-1 -1 -1 $-1 25 0 0 1 0 0 0 0 -1 forward_v I I I I #
+coedge $-1 -1 -1 $-1 $98 $75 $99 $100 forward $46 $-1 #
+coedge $-1 -1 -1 $-1 $101 $48 $98 $102 forward $31 $-1 #
+coedge $-1 -1 -1 $-1 $48 $101 $103 $104 forward $31 $-1 #
+coedge $-1 -1 -1 $-1 $78 $77 $48 $71 reversed $79 $-1 #
+edge $105 -1 -1 $-1 $106 -5 $107 5 $70 $108 forward @7 unknown T 35 -5 -5 35 5 -5 #
+coedge $-1 -1 -1 $-1 $50 $49 $109 $110 forward $20 $-1 #
+coedge $-1 -1 -1 $-1 $111 $112 $49 $74 reversed $95 $-1 #
+edge $113 -1 -1 $-1 $82 -5 $114 5 $73 $115 forward @7 unknown T 25 5 5 35 5 5 #
+coedge $-1 -1 -1 $-1 $67 $116 $50 $76 reversed $46 $-1 #
+edge $117 -1 -1 $-1 $118 -5 $81 5 $75 $119 forward @7 unknown T 25 -5 5 35 -5 5 #
+coedge $-1 -1 -1 $-1 $70 $51 $116 $120 forward $79 $-1 #
+coedge $-1 -1 -1 $-1 $51 $70 $111 $121 reversed $79 $-1 #
+loop $-1 -1 -1 $-1 $-1 $77 $94 T 35 -5 -5 35 5 5 unknown #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $122 $-1 $52 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 1 #
+vertex $123 -1 -1 $-1 $52 $124 #
+vertex $125 -1 -1 $-1 $52 $126 #
+straight-curve $-1 -1 -1 $-1 35 0 5 0 1 0 I I #
+simple-snl-attrib $-1 -1 $-1 $54 $24 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 3 @13 MESH_INTERVAL @4 LIMP @4 LIMP 2 1 0 5 1 0 0 1 1 #
+simple-snl-attrib $-1 -1 $127 $55 $37 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 9 -2147483648 -1 #
+coedge $-1 -1 -1 $-1 $86 $86 $59 $87 forward $56 $-1 #
+edge $128 -1 -1 $-1 $129 0 $129 6.2831853071795862 $86 $130 forward @7 unknown T -5 -5 5 5 5 5 #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $131 $-1 $60 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 13 #
+vertex $132 -1 -1 $-1 $60 $133 #
+ellipse-curve $-1 -1 -1 $-1 0 0 -5 0 0 -1 5 0 0 1 I I #
+simple-snl-attrib $-1 -1 $-1 $62 $30 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 3 @13 MESH_INTERVAL @4 LIMP @4 LIMP 2 1 0 5 1 0 0 1 1 #
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+integer_attrib-name_attrib-gen-attrib $-1 -1 $135 $-1 $64 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 5 #
+face $136 -1 -1 $-1 $-1 $79 $9 $-1 $137 reversed single T 35 -5 -5 35 5 5 F #
+loop $-1 -1 -1 $-1 $-1 $111 $64 T 25 5 -5 35 5 5 unknown #
+plane-surface $-1 -1 -1 $-1 30 5 0 0 -1 0 0 0 -1 forward_v I I I I #
+coedge $-1 -1 -1 $-1 $138 $109 $112 $139 forward $65 $-1 #
+coedge $-1 -1 -1 $-1 $116 $67 $68 $102 reversed $46 $-1 #
+coedge $-1 -1 -1 $-1 $109 $138 $67 $100 reversed $65 $-1 #
+edge $140 -1 -1 $-1 $118 -5 $141 5 $99 $142 forward @7 unknown T 25 -5 -5 25 -5 5 #
+coedge $-1 -1 -1 $-1 $69 $68 $138 $143 forward $31 $-1 #
+edge $144 -1 -1 $-1 $107 -5 $141 5 $98 $145 forward @7 unknown T 25 -5 -5 35 -5 -5 #
+coedge $-1 -1 -1 $-1 $112 $111 $69 $104 reversed $95 $-1 #
+edge $146 -1 -1 $-1 $147 -5 $106 5 $103 $148 forward @7 unknown T 25 5 -5 35 5 -5 #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $149 $-1 $71 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 5 #
+vertex $150 -1 -1 $-1 $71 $151 #
+vertex $152 -1 -1 $-1 $120 $153 #
+straight-curve $-1 -1 -1 $-1 35 0 -5 0 -1 0 I I #
+coedge $-1 -1 -1 $-1 $97 $99 $72 $110 reversed $65 $-1 #
+edge $154 -1 -1 $-1 $114 -5 $118 5 $109 $155 forward @7 unknown T 25 -5 5 25 5 5 #
+coedge $-1 -1 -1 $-1 $103 $73 $78 $121 forward $95 $-1 #
+coedge $-1 -1 -1 $-1 $73 $103 $97 $139 reversed $95 $-1 #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $156 $-1 $74 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 2 #
+vertex $157 -1 -1 $-1 $74 $158 #
+straight-curve $-1 -1 -1 $-1 30 5 5 -1 0 0 I I #
+coedge $-1 -1 -1 $-1 $75 $98 $77 $120 reversed $46 $-1 #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $159 $-1 $76 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 4 #
+vertex $160 -1 -1 $-1 $110 $161 #
+straight-curve $-1 -1 -1 $-1 30 -5 5 1 0 0 I I #
+edge $162 -1 -1 $-1 $81 -5 $107 5 $77 $163 forward @7 unknown T 35 -5 -5 35 -5 5 #
+edge $164 -1 -1 $-1 $82 -5 $106 5 $78 $165 forward @7 unknown T 35 5 -5 35 5 5 #
+simple-snl-attrib $-1 -1 $-1 $80 $52 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 1 -2147483648 -1 #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $166 $-1 $81 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 1 #
+point $-1 -1 -1 $-1 35 -5 5 #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $167 $-1 $82 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 2 #
+point $-1 -1 -1 $-1 35 5 5 #
+simple-snl-attrib $-1 -1 $-1 $85 $37 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 3 @13 MESH_INTERVAL @4 LIMP @4 LIMP 2 1 0 5 1 0 0 1 1 #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $168 $-1 $87 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 14 #
+vertex $169 -1 -1 $-1 $87 $170 #
+ellipse-curve $-1 -1 -1 $-1 0 0 5 0 0 1 5 0 0 1 I I #
+simple-snl-attrib $-1 -1 $-1 $88 $60 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 13 -2147483648 -1 #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $171 $-1 $89 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 9 #
+point $-1 -1 -1 $-1 5 0 -5 #
+simple-snl-attrib $-1 -1 $-1 $92 $45 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 3 @13 MESH_INTERVAL @4 LIMP @4 LIMP 2 1 0 5 1 0 0 1 1 #
+simple-snl-attrib $-1 -1 $172 $93 $64 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 5 -2147483648 -1 #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $173 $-1 $94 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 6 #
+plane-surface $-1 -1 -1 $-1 35 0 0 -1 0 0 0 0 1 forward_v I I I I #
+coedge $-1 -1 -1 $-1 $99 $97 $101 $143 reversed $65 $-1 #
+edge $174 -1 -1 $-1 $114 -5 $147 5 $112 $175 forward @7 unknown T 25 5 -5 25 5 5 #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $176 $-1 $100 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 9 #
+vertex $177 -1 -1 $-1 $143 $178 #
+straight-curve $-1 -1 -1 $-1 25 -5 0 0 0 -1 I I #
+edge $179 -1 -1 $-1 $141 -5 $147 5 $138 $180 forward @7 unknown T 25 -5 -5 25 5 -5 #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $181 $-1 $102 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 6 #
+straight-curve $-1 -1 -1 $-1 30 -5 -5 -1 0 0 I I #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $182 $-1 $104 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 8 #
+vertex $183 -1 -1 $-1 $104 $184 #
+straight-curve $-1 -1 -1 $-1 30 5 -5 1 0 0 I I #
+simple-snl-attrib $-1 -1 $-1 $105 $71 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 5 -2147483648 -1 #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $185 $-1 $106 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 5 #
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+integer_attrib-name_attrib-gen-attrib $-1 -1 $186 $-1 $107 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 6 #
+point $-1 -1 -1 $-1 35 -5 -5 #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $187 $-1 $110 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 3 #
+straight-curve $-1 -1 -1 $-1 25 0 5 0 -1 0 I I #
+simple-snl-attrib $-1 -1 $-1 $113 $74 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 2 -2147483648 -1 #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $188 $-1 $114 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 3 #
+point $-1 -1 -1 $-1 25 5 5 #
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+integer_attrib-name_attrib-gen-attrib $-1 -1 $189 $-1 $118 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 4 #
+point $-1 -1 -1 $-1 25 -5 5 #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $190 $-1 $120 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 10 #
+straight-curve $-1 -1 -1 $-1 35 -5 0 0 0 -1 I I #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $191 $-1 $121 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 12 #
+straight-curve $-1 -1 -1 $-1 35 5 0 0 0 -1 I I #
+simple-snl-attrib $-1 -1 $-1 $123 $81 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 1 -2147483648 -1 #
+simple-snl-attrib $-1 -1 $-1 $125 $82 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 2 -2147483648 -1 #
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+integer_attrib-name_attrib-gen-attrib $-1 -1 $192 $-1 $129 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 10 #
+point $-1 -1 -1 $-1 5 0 5 #
+simple-snl-attrib $-1 -1 $-1 $132 $89 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 9 -2147483648 -1 #
+simple-snl-attrib $-1 -1 $-1 $135 $64 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 3 @13 MESH_INTERVAL @4 LIMP @4 LIMP 2 1 0 5 1 0 0 1 1 #
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+straight-curve $-1 -1 -1 $-1 25 5 0 0 0 -1 I I #
+simple-snl-attrib $-1 -1 $-1 $140 $100 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 9 -2147483648 -1 #
+integer_attrib-name_attrib-gen-attrib $-1 -1 $195 $-1 $141 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 7 #
+point $-1 -1 -1 $-1 25 -5 -5 #
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+straight-curve $-1 -1 -1 $-1 25 0 -5 0 1 0 I I #
+simple-snl-attrib $-1 -1 $-1 $144 $102 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 6 -2147483648 -1 #
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+integer_attrib-name_attrib-gen-attrib $-1 -1 $197 $-1 $147 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 @8 CUBIT_ID 8 #
+point $-1 -1 -1 $-1 25 5 -5 #
+simple-snl-attrib $-1 -1 $-1 $150 $106 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 5 -2147483648 -1 #
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+simple-snl-attrib $-1 -1 $-1 $154 $110 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 3 -2147483648 -1 #
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+simple-snl-attrib $-1 -1 $-1 $160 $118 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 4 -2147483648 -1 #
+simple-snl-attrib $-1 -1 $-1 $162 $120 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 10 -2147483648 -1 #
+simple-snl-attrib $-1 -1 $-1 $164 $121 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 12 -2147483648 -1 #
+simple-snl-attrib $-1 -1 $-1 $169 $129 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 10 -2147483648 -1 #
+simple-snl-attrib $-1 -1 $-1 $173 $94 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 3 @13 MESH_INTERVAL @4 LIMP @4 LIMP 2 1 0 5 1 0 0 1 1 #
+simple-snl-attrib $-1 -1 $-1 $174 $139 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 11 -2147483648 -1 #
+simple-snl-attrib $-1 -1 $-1 $177 $141 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 7 -2147483648 -1 #
+simple-snl-attrib $-1 -1 $-1 $179 $143 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 7 -2147483648 -1 #
+simple-snl-attrib $-1 -1 $-1 $183 $147 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 @17 NEW_SIMPLE_ATTRIB 1 @9 ENTITY_ID 0 3 8 -2147483648 -1 #
+End-of-ACIS-data
\ No newline at end of file
diff --git a/MeshFiles/unittest/io/cylcube.stp b/MeshFiles/unittest/io/cylcube.stp
new file mode 100644
index 0000000..bc4ec64
--- /dev/null
+++ b/MeshFiles/unittest/io/cylcube.stp
@@ -0,0 +1,290 @@
+ISO-10303-21;
+HEADER;
+FILE_DESCRIPTION(('STEP AP214'),'1');
+FILE_NAME('/home/user/cylcube.stp','2014-02-15T18:13:39',(' '),(' '),'Spatial InterOp 3D',' ',' ');
+FILE_SCHEMA(('automotive_design'));
+ENDSEC;
+DATA;
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+#2=APPLICATION_PROTOCOL_DEFINITION('INTERNATIONAL STANDARD','automotive_design',1994,#13);
+#3=PRODUCT_CATEGORY_RELATIONSHIP('NONE','NONE',#14,#15);
+#4=SHAPE_DEFINITION_REPRESENTATION(#16,#17);
+#5=PRODUCT_DEFINITION_CONTEXT('',#18,'design');
+#6=APPLICATION_PROTOCOL_DEFINITION('INTERNATIONAL STANDARD','automotive_design',1994,#18);
+#7=PRODUCT_CATEGORY_RELATIONSHIP('NONE','NONE',#19,#20);
+#8=SHAPE_DEFINITION_REPRESENTATION(#21,#22);
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+#13=APPLICATION_CONTEXT(' ');
+#14=PRODUCT_CATEGORY('part','NONE');
+#15=PRODUCT_RELATED_PRODUCT_CATEGORY('detail',' ',(#31));
+#16=PRODUCT_DEFINITION_SHAPE('NONE','NONE',#32);
+#17=ADVANCED_BREP_SHAPE_REPRESENTATION('1',(#33,#34),#9);
+#18=APPLICATION_CONTEXT(' ');
+#19=PRODUCT_CATEGORY('part','NONE');
+#20=PRODUCT_RELATED_PRODUCT_CATEGORY('detail',' ',(#35));
+#21=PRODUCT_DEFINITION_SHAPE('NONE','NONE',#36);
+#22=ADVANCED_BREP_SHAPE_REPRESENTATION('2',(#37,#38),#9);
+#25=UNCERTAINTY_MEASURE_WITH_UNIT(LENGTH_MEASURE(1.0E-06),#27,'','');
+#27= (CONVERSION_BASED_UNIT('MILLIMETRE',#41)LENGTH_UNIT()NAMED_UNIT(#44));
+#28= (NAMED_UNIT(#46)PLANE_ANGLE_UNIT()SI_UNIT($,.RADIAN.));
+#29= (NAMED_UNIT(#46)SOLID_ANGLE_UNIT()SI_UNIT($,.STERADIAN.));
+#31=PRODUCT('1','1','PART-1-DESC',(#52));
+#32=PRODUCT_DEFINITION('NONE','NONE',#53,#1);
+#33=MANIFOLD_SOLID_BREP('1',#54);
+#34=AXIS2_PLACEMENT_3D('',#55,#56,#57);
+#35=PRODUCT('2','2','PART-2-DESC',(#58));
+#36=PRODUCT_DEFINITION('NONE','NONE',#59,#5);
+#37=MANIFOLD_SOLID_BREP('2',#60);
+#38=AXIS2_PLACEMENT_3D('',#61,#62,#63);
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+#83=PLANE('',#103);
+#84=FACE_OUTER_BOUND('',#104,.T.);
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+#86=FACE_OUTER_BOUND('',#106,.T.);
+#87=PLANE('',#107);
+#88=FACE_OUTER_BOUND('',#108,.T.);
+#89=CYLINDRICAL_SURFACE('',#109,5.0);
+#90=FACE_OUTER_BOUND('',#110,.T.);
+#91=CYLINDRICAL_SURFACE('',#111,5.0);
+#92=FACE_OUTER_BOUND('',#112,.T.);
+#93=PLANE('',#113);
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+#159=ORIENTED_EDGE('',*,*,#195,.F.);
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+#165=ORIENTED_EDGE('',*,*,#194,.T.);
+#166=ORIENTED_EDGE('',*,*,#198,.F.);
+#167=ORIENTED_EDGE('',*,*,#196,.T.);
+#168=ORIENTED_EDGE('',*,*,#199,.F.);
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+#171=DIRECTION('',(1.0,0.0,0.0));
+#172=ORIENTED_EDGE('',*,*,#199,.T.);
+#173=ORIENTED_EDGE('',*,*,#195,.T.);
+#174=CARTESIAN_POINT('',(0.0,0.0,-5.0));
+#175=DIRECTION('',(0.0,0.0,-1.0));
+#176=DIRECTION('',(-1.0,0.0,0.0));
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+#178=ORIENTED_EDGE('',*,*,#198,.T.);
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+#181=DIRECTION('',(1.0,0.0,0.0));
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+#183=EDGE_CURVE('',#201,#203,#204,.T.);
+#184=EDGE_CURVE('',#203,#205,#206,.T.);
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+#186=EDGE_CURVE('',#208,#209,#210,.T.);
+#187=EDGE_CURVE('',#209,#211,#212,.T.);
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+#190=EDGE_CURVE('',#205,#211,#216,.T.);
+#191=EDGE_CURVE('',#200,#209,#217,.T.);
+#192=EDGE_CURVE('',#203,#213,#218,.T.);
+#193=EDGE_CURVE('',#201,#208,#219,.T.);
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+#195=EDGE_CURVE('',#223,#220,#224,.T.);
+#196=EDGE_CURVE('',#225,#223,#226,.T.);
+#197=EDGE_CURVE('',#221,#225,#227,.T.);
+#198=EDGE_CURVE('',#225,#221,#228,.T.);
+#199=EDGE_CURVE('',#220,#223,#229,.T.);
+#200=VERTEX_POINT('',#230);
+#201=VERTEX_POINT('',#231);
+#202=LINE('',#232,#233);
+#203=VERTEX_POINT('',#234);
+#204=LINE('',#235,#236);
+#205=VERTEX_POINT('',#237);
+#206=LINE('',#238,#239);
+#207=LINE('',#240,#241);
+#208=VERTEX_POINT('',#242);
+#209=VERTEX_POINT('',#243);
+#210=LINE('',#244,#245);
+#211=VERTEX_POINT('',#246);
+#212=LINE('',#247,#248);
+#213=VERTEX_POINT('',#249);
+#214=LINE('',#250,#251);
+#215=LINE('',#252,#253);
+#216=LINE('',#254,#255);
+#217=LINE('',#256,#257);
+#218=LINE('',#258,#259);
+#219=LINE('',#260,#261);
+#220=VERTEX_POINT('',#262);
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+#222=LINE('',#264,#265);
+#223=VERTEX_POINT('',#266);
+#224=CIRCLE('',#267,5.0);
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+#226=LINE('',#269,#270);
+#227=CIRCLE('',#271,5.0);
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+#231=CARTESIAN_POINT('',(35.0,5.0,5.0));
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+#256=CARTESIAN_POINT('',(35.0,-5.0,0.0));
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+#260=CARTESIAN_POINT('',(35.0,5.0,0.0));
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+#273=AXIS2_PLACEMENT_3D('',#297,#298,#299);
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+#298=DIRECTION('',(0.0,0.0,-1.0));
+#299=DIRECTION('',(1.0,0.0,0.0));
+ENDSEC;
+END-ISO-10303-21;
diff --git a/MeshFiles/unittest/io/eul26x48x96.t.3.nc b/MeshFiles/unittest/io/eul26x48x96.t.3.nc
new file mode 100644
index 0000000..fafba2a
Binary files /dev/null and b/MeshFiles/unittest/io/eul26x48x96.t.3.nc differ
diff --git a/MeshFiles/unittest/io/eul26x48x96.t0.nc b/MeshFiles/unittest/io/eul26x48x96.t0.nc
new file mode 100644
index 0000000..453105a
Binary files /dev/null and b/MeshFiles/unittest/io/eul26x48x96.t0.nc differ
diff --git a/MeshFiles/unittest/io/eul26x48x96.t1.nc b/MeshFiles/unittest/io/eul26x48x96.t1.nc
new file mode 100644
index 0000000..61a7c8f
Binary files /dev/null and b/MeshFiles/unittest/io/eul26x48x96.t1.nc differ
diff --git a/MeshFiles/unittest/io/eul26x48x96.t2.nc b/MeshFiles/unittest/io/eul26x48x96.t2.nc
new file mode 100644
index 0000000..239bd83
Binary files /dev/null and b/MeshFiles/unittest/io/eul26x48x96.t2.nc differ
diff --git a/MeshFiles/unittest/io/fv26x46x72.t.3.nc b/MeshFiles/unittest/io/fv26x46x72.t.3.nc
new file mode 100644
index 0000000..15ba5b4
Binary files /dev/null and b/MeshFiles/unittest/io/fv26x46x72.t.3.nc differ
diff --git a/MeshFiles/unittest/io/gcrm_r3.nc b/MeshFiles/unittest/io/gcrm_r3.nc
new file mode 100644
index 0000000..6d1b8d2
Binary files /dev/null and b/MeshFiles/unittest/io/gcrm_r3.nc differ
diff --git a/MeshFiles/unittest/io/mpasx1.642.t.2.nc b/MeshFiles/unittest/io/mpasx1.642.t.2.nc
new file mode 100644
index 0000000..f055c49
Binary files /dev/null and b/MeshFiles/unittest/io/mpasx1.642.t.2.nc differ
diff --git a/MeshFiles/unittest/mpas_p8.h5m b/MeshFiles/unittest/mpas_p8.h5m
new file mode 100644
index 0000000..75662d2
Binary files /dev/null and b/MeshFiles/unittest/mpas_p8.h5m differ
diff --git a/MeshFiles/unittest/surfrandomtris-4part.h5m b/MeshFiles/unittest/surfrandomtris-4part.h5m
new file mode 100644
index 0000000..1ca984a
Binary files /dev/null and b/MeshFiles/unittest/surfrandomtris-4part.h5m differ
diff --git a/config/cgns.m4 b/config/cgns.m4
new file mode 100644
index 0000000..16b19e3
--- /dev/null
+++ b/config/cgns.m4
@@ -0,0 +1,92 @@
+#######################################################################################
+# Check for CGNS library
+# Sets HAVE_CGNS to 'yes' or 'no'
+# If HAVE_CGNS == yes, then exports:
+# CGNS_CPPFLAGS
+# CGNS_LDFLAGS
+# CGNS_LIBS
+#######################################################################################
+AC_DEFUN([FATHOM_CHECK_CGNS],[
+
+AC_MSG_CHECKING([if CGNS support is enabled])
+AC_ARG_WITH(cgns,
+[AC_HELP_STRING([--with-cgns<:@=DIR@:>@], [Specify CGNS library to use for CGNS file format])
+AC_HELP_STRING([--without-cgns], [Disable support for CGNS file format])],
+[CGNS_ARG=$withval
+DISTCHECK_CONFIGURE_FLAGS="$DISTCHECK_CONFIGURE_FLAGS --with-cgns=\"${withval}\""
+]
+, [CGNS_ARG=])
+if test "xno" != "x$CGNS_ARG"; then
+ AC_MSG_RESULT([yes])
+else
+ AC_MSG_RESULT([no])
+fi
+
+ # if CGNS support is not disabled
+HAVE_CGNS=no
+if test "xno" != "x$CGNS_ARG"; then
+ HAVE_CGNS=yes
+
+ # if a path is specified, update LIBS and INCLUDES accordingly
+ if test "xyes" != "x$CGNS_ARG" && test "x" != "x$CGNS_ARG"; then
+ if test -d "${CGNS_ARG}/lib"; then
+ CGNS_LDFLAGS="-L${CGNS_ARG}/lib"
+ elif test -d "${CGNS_ARG}"; then
+ CGNS_LDFLAGS="-L${CGNS_ARG}"
+ else
+ AC_MSG_ERROR("$CGNS_ARG is not a directory.")
+ fi
+ if test -d "${CGNS_ARG}/include"; then
+ CGNS_CPPFLAGS="-I${CGNS_ARG}/include"
+ elif test -d "${CGNS_ARG}/inc"; then
+ CGNS_CPPFLAGS="-I${CGNS_ARG}/inc"
+ else
+ CGNS_CPPFLAGS="-I${CGNS_ARG}"
+ fi
+ fi
+
+ old_CPPFLAGS="$CPPFLAGS"
+ CPPFLAGS="$CGNS_CPPFLAGS $CPPFLAGS"
+ old_LDFLAGS="$LDFLAGS"
+ LDFLAGS="$CGNS_LDFLAGS $HDF5_LDFLAGS $LDFLAGS"
+
+ # Check for C library
+ AC_LANG_PUSH([C])
+
+ AC_CHECK_HEADER([cgnslib.h], [],
+ [AC_MSG_WARN([[CGNS header not found.]]); HAVE_CGNS=no] )
+
+ # Check if cgns is usable by itself
+ AC_CHECK_LIB( [cgns], [cg_open], [CGNS_LIBS="-lcgns"], [
+ # Check if cgns is usable with HDF5
+ unset ac_cv_lib_cgns
+ unset ac_cv_lib_cgns_cg_open
+ # If we haven't already looked for HDF5 libraries, again now incase
+ # they're in the CGNS lib directory.
+ FATHOM_DETECT_HDF5_LIBS
+ LDFLAGS="$LDFLAGS $HDF5_LDFLAGS"
+ AC_CHECK_LIB( [cgns], [cg_open], [CGNS_LIBS="-lcgns -lhdf5_hl"], [
+ # Try one more time with HDF5 and libcurl
+ unset ac_cv_lib_cgns
+ unset ac_cv_lib_cgns_cg_open
+ AC_CHECK_LIB( [cgns], [cg_open], [CGNS_LIBS="-lcgns -lhdf5_hl -lcurl"],
+ [HAVE_CGNS=no], [-lhdf5_hl $HDF5_LIBS -lcurl] )],
+ [-lhdf5_hl $HDF5_LIBS] )],
+ )
+
+ CPPFLAGS="$old_CPPFLAGS"
+ LDFLAGS="$old_LDFLAGS"
+ AC_LANG_POP([C])
+
+ if test "x$HAVE_CGNS" = "xno"; then
+ if test "x$CGNS_ARG" != "x"; then
+ AC_MSG_ERROR("CGNS not found or not working")
+ else
+ AC_MSG_WARN("CGNS support disabled")
+ fi
+ CGNS_CPPFLAGS=
+ CGNS_LDFLAGS=
+ fi
+fi
+
+]) # FATHOM_HAVE_CGNS
diff --git a/config/compiler.m4 b/config/compiler.m4
index 3a5d1a5..4787100 100644
--- a/config/compiler.m4
+++ b/config/compiler.m4
@@ -138,8 +138,6 @@ fi
if test "xno" != "x$CHECK_FC"; then
AC_PROG_FC
AC_PROG_F77
- AC_F77_LIBRARY_LDFLAGS
- AC_FC_LIBRARY_LDFLAGS
fi
]) # FATHOM_CHECK_COMPILERS
@@ -224,6 +222,14 @@ if test "xyes" = "x$enable_debug"; then
CFLAGS="$CFLAGS -g"
FCFLAGS="$FCFLAGS -g"
FFLAGS="$FFLAGS -g"
+ # Add -fstack-protector-all option for g++ in debug mode
+ if test "x$cxx_compiler" = "xGNU"; then
+ CXXFLAGS="$CXXFLAGS -fstack-protector-all"
+ fi
+ # Add -fstack-protector-all option for gcc in debug mode
+ if test "x$cc_compiler" = "xGNU"; then
+ CFLAGS="$CFLAGS -fstack-protector-all"
+ fi
fi
if test "xyes" = "x$enable_cxx_optimize"; then
CXXFLAGS="$CXXFLAGS -O2 -DNDEBUG"
@@ -535,7 +541,15 @@ case "$cc_compiler:$host_cpu" in
case "$target_vendor" in
bgp)
FATHOM_CC_32BIT=-q32
+ FATHOM_CC_64BIT=-q64
+ AR="ar"
+ NM="nm -B"
+ ;;
+ bgq)
+ FATHOM_CC_32BIT=-q32
FATHOM_CC_64BIT=-q64
+ FATHOM_CC_SPECIAL=-qarch=qp
+ FATHOM_CXX_SPECIAL="-qarch=qp -qpic=large -qmaxmem=-1"
AR="ar"
NM="nm -B"
;;
diff --git a/config/hdf5.m4 b/config/hdf5.m4
index 4d3d11d..b603d24 100644
--- a/config/hdf5.m4
+++ b/config/hdf5.m4
@@ -28,16 +28,17 @@ if test "xyes" != "x$HAVE_LIB_HDF5"; then
HAVE_LIB_HDF5=no
FATHOM_HDF5_LIBS_HELPER
+ FATHOM_HDF5_LIBS_HELPER([-ldl])
if test $HAVE_ZLIB = yes; then
- FATHOM_HDF5_LIBS_HELPER([-lz])
- FATHOM_HDF5_LIBS_HELPER([-lz -lpthread])
+ FATHOM_HDF5_LIBS_HELPER([-lz -ldl])
+ FATHOM_HDF5_LIBS_HELPER([-lz -ldl -lpthread])
fi
if test $HAVE_SZIP = yes; then
- FATHOM_HDF5_LIBS_HELPER([-lsz])
- FATHOM_HDF5_LIBS_HELPER([-lsz -lpthread])
+ FATHOM_HDF5_LIBS_HELPER([-lsz -ldl])
+ FATHOM_HDF5_LIBS_HELPER([-lsz -ldl -lpthread])
if test $HAVE_ZLIB = yes; then
- FATHOM_HDF5_LIBS_HELPER([-lsz -lz])
- FATHOM_HDF5_LIBS_HELPER([-lsz -lz -lpthread])
+ FATHOM_HDF5_LIBS_HELPER([-lsz -lz -ldl])
+ FATHOM_HDF5_LIBS_HELPER([-lsz -lz -ldl -lpthread])
fi
fi
fi
diff --git a/config/netcdf.m4 b/config/netcdf.m4
index 041327d..4c13802 100644
--- a/config/netcdf.m4
+++ b/config/netcdf.m4
@@ -85,33 +85,47 @@ if test "xno" != "x$NETCDF_ARG"; then
NETCDF_CPPFLAGS="-I${NETCDF_ARG}"
fi
fi
-
+
+ AC_PATH_PROG([NC_CONFIG], [nc-config], [no], [${NETCDF_ARG}/bin])
+ if test "$NC_CONFIG" != "no" ; then
+ NETCDF_CPPFLAGS="`$NC_CONFIG --cflags`"
+ NETCDF_LDFLAGS="`$NC_CONFIG --libs`"
+ NETCDF_VERSION="`$NC_CONFIG --version`"
+ AC_SUBST([NETCDF_CPPFLAGS])
+ AC_SUBST([NETCDF_LDFLAGS])
+ AC_SUBST([NETCDF_VERSION])
+ else
+ HAVE_NETCDF=no
+ AC_MSG_WARN("NetCDF configuration utility not found")
+ fi
+
old_CPPFLAGS="$CPPFLAGS"
CPPFLAGS="$NETCDF_CPPFLAGS $CPPFLAGS"
old_LDFLAGS="$LDFLAGS"
- LDFLAGS="$NETCDF_LDFLAGS $HDF5_LDFLAGS $LDFLAGS"
+ LDFLAGS="$NETCDF_LDFLAGS $LDFLAGS"
# Check for C library
AC_LANG_PUSH([C])
AC_CHECK_HEADERS( [netcdf.h],
[FATHOM_CHECK_NETCDF_LIMITS([$1],[$2],[netcdf.h],[NETCDF_SUFFICIENT_DIM_VARS])],
[AC_MSG_WARN([[NetCDF header not found.]]); HAVE_NETCDF=no] )
-
+
# Check if netcdf is usable by itself
+ # AC_CHECK_LIB( [netcdf], [nc_create], [NETCDF_LIBS="-lnetcdf"], [NETCDF_LIBS=${NETCDF_LDFLAGS}] )
AC_CHECK_LIB( [netcdf], [nc_create], [NETCDF_LIBS="-lnetcdf"], [
- # Check if netcdf is usable with HDF5
+ # Check if netcdf is usable with HDF5
unset ac_cv_lib_netcdf
unset ac_cv_lib_netcdf_nc_create
- # If we haven't already looked for HDF5 libraries, again now incase
- # they're in the NetCDF lib directory.
+ # If we haven't already looked for HDF5 libraries, again now incase
+ # they're in the NetCDF lib directory.
FATHOM_DETECT_HDF5_LIBS
LDFLAGS="$LDFLAGS $HDF5_LDFLAGS"
- AC_CHECK_LIB( [netcdf], [nc_create], [NETCDF_LIBS="-lnetcdf -lhdf5_hl"], [
+ AC_CHECK_LIB( [netcdf], [nc_create], [NETCDF_LIBS="-lnetcdf -lhdf5_hl $HDF5_LIBS"], [
# Try one more time with HDF5 and libcurl
unset ac_cv_lib_netcdf
unset ac_cv_lib_netcdf_nc_create
- AC_CHECK_LIB( [netcdf], [nc_create], [NETCDF_LIBS="-lnetcdf -lhdf5_hl -lcurl"],
- [HAVE_NETCDF=no], [-lhdf5_hl $HDF5_LIBS -lcurl] )],
+ AC_CHECK_LIB( [netcdf], [nc_create], [NETCDF_LIBS="-lnetcdf -lhdf5_hl -lcurl "],
+ [HAVE_NETCDF=no], [-lhdf5_hl $HDF5_LIBS -lcurl ] )],
[-lhdf5_hl $HDF5_LIBS] )],
)
diff --git a/configure.ac b/configure.ac
index 3e74c2d..afea93a 100644
--- a/configure.ac
+++ b/configure.ac
@@ -41,6 +41,7 @@ else
AM_SILENT_RULES(no)
fi
])
+AC_C_BIGENDIAN
# Check if platform is BlueGene
AC_MSG_CHECKING([if platform is IBM BlueGene])
@@ -67,14 +68,6 @@ if test "xyes" = "x$ENABLE_FORTRAN" && test "x" != "x$FC"; then
AC_FC_WRAPPERS
fi
-if test "xyes" = "x$ENABLE_FORTRAN" && test "x" != "x$FLIBS"; then
- LIBS="$LIBS $FLIBS"
-fi
-
-if test "xyes" = "x$ENABLE_FORTRAN" && test "x" != "x$FCLIBS"; then
- LIBS="$LIBS $FCLIBS"
-fi
-
################################################################################
# Check for need for extra flags to support cray pointers
################################################################################
@@ -453,26 +446,45 @@ AM_CPPFLAGS="$PNETCDF_CPPFLAGS $AM_CPPFLAGS"
EXPORT_LDFLAGS="$PNETCDF_LDFLAGS $EXPORT_LDFLAGS"
AC_SUBST(PNETCDF_LIBS)
+################################################################################
+# CGNS OPTIONS
+################################################################################
+
+old_LDFLAGS="$LDFLAGS"
+LDFLAGS="$LDFLAGS $HDF5_LDFLAGS"
+FATHOM_CHECK_CGNS
+LDFLAGS="$old_LDFLAGS"
+if test "xno" != "x$HAVE_CGNS"; then
+ AM_CPPFLAGS="$AM_CPPFLAGS -DCGNS_FILE"
+fi
+AM_CONDITIONAL(CGNS_FILE, [test "xno" != "x$HAVE_CGNS"])
+AM_CPPFLAGS="$CGNS_CPPFLAGS $AM_CPPFLAGS"
+EXPORT_LDFLAGS="$CGNS_LDFLAGS $EXPORT_LDFLAGS"
+AC_SUBST(CGNS_LIBS)
+
#################################################################################
# Documentation
#################################################################################
-AC_ARG_ENABLE([doxygen],
-[AC_HELP_STRING([[--enable-doxygen@<:@=DIR@:>@]],[Specify directory where Doxygen program is installed])
-AC_HELP_STRING([--disable-doxygen],[Do not generate API documentation (default)])],
- [ENABLE_DOXYGEN="$enableval"],[ENABLE_DOXYGEN=no] )
-if test "x$ENABLE_DOXYGEN" = "xyes"; then
- AC_PATH_PROG( [DOXYGEN], [doxygen], [no] )
-elif test "x$ENABLE_DOXYGEN" != "xno"; then
- AC_PATH_PROG( [DOXYGEN], [doxygen], [no], [$ENABLE_DOXYGEN] )
+AC_ARG_ENABLE([docs],
+[AC_HELP_STRING([--enable-docs],[indicate to check for doxygen installation])],
+ [ENABLE_DOCS=yes],[ENABLE_DOCS=no] )
+AC_ARG_WITH([doxygen],
+[AC_HELP_STRING([--with-doxygen=DIR], [Specify directory where Doxygen program is installed. By default, it is /usr/bin])],
+[WITH_DOXYGEN="$withval"], [WITH_DOXYGEN=no])
+
+if test "x$WITH_DOXYGEN" != "xno"; then
+ AC_PATH_PROGS( [DOXYGEN], [doxygen], [no],[$WITH_DOXYGEN] )
+else
+ AC_PATH_PROGS( [DOXYGEN], [doxygen], [no],[$PATH])
fi
-if test "x$ENABLE_DOXYGEN" != "xno"; then
+if test "x$ENABLE_DOCS" = "xyes"; then
if test "x$DOXYGEN" = "xno"; then
AC_MSG_ERROR("Doxygen executable not found.")
fi
fi
AC_SUBST([DOXYGEN])
-AM_CONDITIONAL([ENABLE_DOXYGEN],[test "x$ENABLE_DOXYGEN" != "xno"])
+AM_CONDITIONAL([ENABLE_DOCS],[test "x$ENABLE_DOCS" != "xno"])
################################################################################
@@ -561,8 +573,6 @@ AC_ARG_WITH([parmetis],
;;
esac] )
-
-
################################################################################
# Optional Libraries
################################################################################
@@ -583,13 +593,14 @@ AC_ARG_WITH( [vtk-lib-suffix],
[case "x$withval" in
xyes)
AC_MSG_ERROR([Must specify a non-empty suffix!])
- VTK_LIB_SUFFIX=
+ VTK_LIB_SUFFIX=
;;
xno)
- VTK_LIB_SUFFIX=
+ AC_MSG_ERROR([Must specify a non-empty suffix!])
+ VTK_LIB_SUFFIX=
;;
x*)
- VTK_LIB_SUFFIX="$withval"
+ VTK_LIB_SUFFIX="$withval"
DISTCHECK_CONFIGURE_FLAGS="$DISTCHECK_CONFIGURE_FLAGS --with-vtk-lib-suffix=\"${withval}\""
;;
esac],[VTK_LIB_SUFFIX=] )
@@ -627,7 +638,6 @@ AC_HELP_STRING([--disable-tools],[Disable all tools by default])],
[ENABLE_TOOLS=$enableval],[ENABLE_TOOLS=] )
# Individual tools
MB_OPTIONAL_TOOL([mbconvert], [yes])
-MB_OPTIONAL_TOOL([pointsearch], [no])
MB_OPTIONAL_TOOL([hexmodops], [yes])
MB_OPTIONAL_TOOL([qvdual], [no] )
MB_OPTIONAL_TOOL([vtkMOABReader],[${VTKMOAB_DEFAULT}] )
@@ -705,7 +715,7 @@ if test "xyes" = "x$WITH_ZOLTAN"; then
[#include <stdlib.h>])
CPPFLAGS="$old_CPPFLAGS"
AC_LANG_POP([C++])
-
+
# Build LDFLAGS for Zoltan
found=no
if test "x" != "x$ZOLTAN_DIR"; then
@@ -727,7 +737,7 @@ if test "xyes" = "x$WITH_ZOLTAN"; then
ZOLTAN_LIB_FLAGS="$ZOLTAN_LIB_FLAGS -L$ZOLTAN_DIR"
fi
fi
-
+
# Test for Zoltan library, possibly requiring parmetis
old_LDFLAGS="$LDFLAGS"
LDFLAGS="$LDFLAGS $ZOLTAN_LIB_FLAGS"
@@ -738,13 +748,51 @@ if test "xyes" = "x$WITH_ZOLTAN"; then
[AC_MSG_ERROR([zoltan library not found or not usable. Perhaps you need to specify --with-parmetis=@<:@DIR@:>@?])],
[-lparmetis -lmetis])])
LDFLAGS="$old_LDFLAGS"
-
+
+ # Define macro HAVE_ZOLTAN
+ AM_CPPFLAGS="$AM_CPPFLAGS -DHAVE_ZOLTAN"
fi
AC_SUBST(ZOLTAN_LIBS)
AC_SUBST(ZOLTAN_LIB_FLAGS)
AC_SUBST(ZOLTAN_INC_FLAGS)
+EXPORT_LDFLAGS="$ZOLTAN_LIB_FLAGS $EXPORT_LDFLAGS"
+
+
+dnl Define a function that checks for the existence of a library
+dnl and if it exists, prepends the corresponding link flag to a
+dnl sepecified variable
+dnl Arguments:
+dnl - The library name
+dnl - The name of the variable to which to prepend the library link flag
+dnl - List of extra libraries required for link test
+dnl - Optional library path linker argument (e.g. -L/opt/foo)
+ AC_DEFUN([FATHOM_CHECK_LIB_LIST],[
+ old_LIBS="$LIBS"
+ LIBS="$5 ${$3} $old_LIBS"
+ AC_HAVE_LIBRARY([$1],[$3="-l$1 ${$3}"],[],[$4])
+ LIBS="$old_LIBS"
+ ])
+
+dnl Define a function that checks for the existence of a library
+dnl and if it exists, prepends the corresponding link flag to a
+dnl sepecified variable
+dnl Arguments:
+dnl - The library name
+dnl - The name of the variable to which to prepend the library link flag
+dnl - List of extra libraries required for link test
+dnl - Optional library path linker argument (e.g. -L/opt/foo)
+ AC_DEFUN([FATHOM_CHECK_VTK_LIB_LIST],[
+ old_LIBS="$LIBS"
+ LIBS="$5 ${$3} $old_LIBS"
+ AC_CHECK_LIB([$1$VTK_LIB_SUFFIX], main,
+ [$3="-l$1$VTK_LIB_SUFFIX ${$3}"],
+ [],[$4])dnl
+ LIBS="$old_LIBS"
+ ])
+
+
################################################################################
# VTK for qvdual and/or vtkMOABReader
################################################################################
@@ -773,7 +821,6 @@ if test "xno" != "x$WITH_VTK" -a "x" != "x$WITH_VTK"; then
AC_LANG_CPLUSPLUS
VTK_INCLUDES=
- VTK_LIB_SUFFIX=-pv3.98
case "x$WITH_VTK" in
xyes|x)
VTK_LIB_DIR=
@@ -793,9 +840,7 @@ if test "xno" != "x$WITH_VTK" -a "x" != "x$WITH_VTK"; then
for dir in /usr/lib/vtk /usr/lib /usr/bin /usr; do
if test "x" = "x$VTK_LIB_DIR"; then
LIBS="$old_LIBS -L$dir"
- unset ac_cv_lib_vtkCommon
- unset ac_cv_lib_vtkCommon_main
- AC_HAVE_LIBRARY([vtkCommonCore$VTK_LIB_SUFFIX],[VTK_LIB_DIR=$dir])
+ FATHOM_CHECK_VTK_LIB_LIST([vtkCommonCore],[$VTK_LIB_SUFFIX], [VTK_LIB_DIR],[],[-L$dir])
fi
done
if test "x" = "x$VTK_LIB_DIR"; then
@@ -815,15 +860,15 @@ if test "xno" != "x$WITH_VTK" -a "x" != "x$WITH_VTK"; then
# Check for non-installed VTK source
AC_CHECK_FILE([vtkUnstructuredGrid.h],[
for subdir in . Common Common/DataModel Filtering GenericFiltering Graphics Hybrid Imaging Parallel Patented Rendering Utilities Utilities/vtkexpat Utilities/expat Utilities/DICOMParser Utilties/vtkpng Utilities/vtkzlib Utilities/freetype/include/freetype Wrapping; do
- AC_MSG_CHECKING([for directory ${WITH_VTK}/$subdir])
- if test -d ${WITH_VTK}/$subdir; then
- VTK_INC_DIR="$VTK_INC_DIR -I${WITH_VTK}/$subdir"
- AC_MSG_RESULT([yes])
- else
- AC_MSG_RESULT([no])
- fi
- done
- ],[AC_MSG_ERROR([VTK includes not found])]
+ AC_MSG_CHECKING([for directory ${WITH_VTK}/$subdir])
+ if test -d ${WITH_VTK}/$subdir; then
+ VTK_INC_DIR="$VTK_INC_DIR -I${WITH_VTK}/$subdir"
+ AC_MSG_RESULT([yes])
+ else
+ AC_MSG_RESULT([no])
+ fi
+ done
+ ],[AC_MSG_ERROR([VTK includes not found])]
)
fi
VTK_INCLUDES="$VTK_INC_DIR"
@@ -831,7 +876,7 @@ if test "xno" != "x$WITH_VTK" -a "x" != "x$WITH_VTK"; then
for dir in ${WITH_VTK}/lib ${WITH_VTK}/lib/vtk ${VTK_DIR}/bin ${WITH_VTK}/bin ${WITH_VTK}; do
if test "x" = "x$VTK_LIB_DIR"; then
LIBS="$old_LIBS -L$dir"
- AC_HAVE_LIBRARY([vtkCommonCore$VTK_LIB_SUFFIX],[VTK_LIB_DIR=$dir])
+ FATHOM_CHECK_VTK_LIB_LIST([vtkCommonCore],[$VTK_LIB_SUFFIX], [VTK_LIB_DIR],[],[-L$dir])
fi
done
if test "x" = "x$VTK_LIB_DIR"; then
@@ -840,22 +885,7 @@ if test "xno" != "x$WITH_VTK" -a "x" != "x$WITH_VTK"; then
LIBS="$old_LIBS"
;;
esac
-
-dnl Define a function that checks for the existence of a library
-dnl and if it exists, prepends the corresponding link flag to a
-dnl sepecified variable
-dnl Arguments:
-dnl - The library name
-dnl - The name of the variable to which to prepend the library link flag
-dnl - List of extra libraries required for link test
-dnl - Optional library path linker argument (e.g. -L/opt/foo)
- AC_DEFUN([FATHOM_CHECK_LIB_LIST],[
- old_LIBS="$LIBS"
- LIBS="$5 ${$3} $old_LIBS"
- AC_HAVE_LIBRARY([$1$2],[$3="-l$1$2 ${$3}"],[],[$4])
- LIBS="$old_LIBS"
- ])
-
+
# These are ordered such that a given library depends only on those libraries
# that preceed it in the list.
FATHOM_CHECK_LIB_LIST([pthread],[],[vtk_sys_libs])
@@ -870,27 +900,28 @@ dnl - Optional library path linker argument (e.g. -L/opt/foo)
FATHOM_CHECK_LIB_LIST([GL],[], [vtk_x_libs],[$x_libs_arg],[-L$x_libraries])
FATHOM_CHECK_LIB_LIST([GLU],[], [vtk_x_libs],[$x_libs_arg],[-L$x_libraries])
vtk_libs_arg="-L$x_libraries $vtk_x_libs $X_EXTRA_LIBS -lX11 $X_PRE_LIBS $vtk_sys_libs"
- FATHOM_CHECK_LIB_LIST([vtksys],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
- FATHOM_CHECK_LIB_LIST([vtkCommonCore],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
- FATHOM_CHECK_LIB_LIST([vtkDICOMParser],[$VTK_LIB_SUFFIX],[vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
- FATHOM_CHECK_LIB_LIST([vtkfreetype],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
- FATHOM_CHECK_LIB_LIST([vtkexpat],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
- FATHOM_CHECK_LIB_LIST([vtkzlib],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
- FATHOM_CHECK_LIB_LIST([vtkpng],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
- FATHOM_CHECK_LIB_LIST([vtkjpeg],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
- FATHOM_CHECK_LIB_LIST([vtktiff],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
- FATHOM_CHECK_LIB_LIST([vtkftgl],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
- FATHOM_CHECK_LIB_LIST([vtkFiltering],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
- FATHOM_CHECK_LIB_LIST([vtkImaging],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
- FATHOM_CHECK_LIB_LIST([verdict],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
- FATHOM_CHECK_LIB_LIST([vtkGraphics],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
- FATHOM_CHECK_LIB_LIST([vtkNetCDF],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
- FATHOM_CHECK_LIB_LIST([vtkexoIIc],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
- FATHOM_CHECK_LIB_LIST([vtkmetaio],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
- FATHOM_CHECK_LIB_LIST([vtkIO],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
- FATHOM_CHECK_LIB_LIST([vtkRendering],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
- FATHOM_CHECK_LIB_LIST([vtkParallel],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
- FATHOM_CHECK_LIB_LIST([vtkHybrid],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+
+ FATHOM_CHECK_VTK_LIB_LIST([vtksys],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+ FATHOM_CHECK_VTK_LIB_LIST([vtkCommonCore],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+ FATHOM_CHECK_VTK_LIB_LIST([vtkDICOMParser],[$VTK_LIB_SUFFIX],[vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+ FATHOM_CHECK_VTK_LIB_LIST([vtkfreetype],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+ FATHOM_CHECK_VTK_LIB_LIST([vtkexpat],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+ FATHOM_CHECK_VTK_LIB_LIST([vtkzlib],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+ FATHOM_CHECK_VTK_LIB_LIST([vtkpng],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+ FATHOM_CHECK_VTK_LIB_LIST([vtkjpeg],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+ FATHOM_CHECK_VTK_LIB_LIST([vtktiff],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+ FATHOM_CHECK_VTK_LIB_LIST([vtkftgl],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+ FATHOM_CHECK_VTK_LIB_LIST([vtkFiltersCore],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+ FATHOM_CHECK_VTK_LIB_LIST([vtkImagingCore],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+ FATHOM_CHECK_VTK_LIB_LIST([verdict],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+ FATHOM_CHECK_VTK_LIB_LIST([vtkGraphics],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+ FATHOM_CHECK_VTK_LIB_LIST([vtkNetCDF],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+ FATHOM_CHECK_VTK_LIB_LIST([vtkexoIIc],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+ FATHOM_CHECK_VTK_LIB_LIST([vtkmetaio],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+ FATHOM_CHECK_VTK_LIB_LIST([vtkIOCore],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+ FATHOM_CHECK_VTK_LIB_LIST([vtkRenderingCore],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+ FATHOM_CHECK_VTK_LIB_LIST([vtkParallelCore],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
+ #FATHOM_CHECK_VTK_LIB_LIST([vtkHybrid],[$VTK_LIB_SUFFIX], [vtk_libs],[$vtk_libs_arg],[-L$VTK_LIB_DIR])
# Make sure we found at least vtkCommonCore and vtkRendering
if ! echo "x $vtk_libs" | grep lvtkCommonCore >/dev/null; then
@@ -1150,6 +1181,7 @@ AC_SUBST(CGM_CPPFLAGS)
AC_SUBST(CGM_LDFLAGS)
AC_SUBST(CGM_LTFLAGS)
AC_SUBST(CGM_LIBS)
+AC_SUBST(CGM_DIR)
AM_CONDITIONAL( HAVE_CGM, [test "x$CGM_MISSING" = "xno"] )
@@ -1187,13 +1219,16 @@ AC_CONFIG_FILES([Makefile
src/Makefile
src/io/Makefile
src/io/mhdf/Makefile
+ src/LocalDiscretization/Makefile
src/parallel/Makefile
src/oldinc/Makefile
test/Makefile
+ test/dagmc/Makefile
test/h5file/Makefile
test/dual/Makefile
test/obb/Makefile
test/perf/Makefile
+ test/perf/point_location/Makefile
test/io/Makefile
test/parallel/Makefile
test/oldinc/Makefile
@@ -1216,11 +1251,12 @@ AC_CONFIG_FILES([Makefile
tools/vtkMOABReaderNew/CMakeLists.txt
doc/Makefile
doc/user.dox
- doc/dev.dox
doc/config.tex
MeshFiles/Makefile
MeshFiles/unittest/Makefile
MeshFiles/unittest/io/Makefile
+ MeshFiles/unittest/iGeom/Makefile
+ MeshFiles/unittest/dagmc/Makefile
])
AC_CONFIG_COMMANDS([src/MOAB_FCDefs.h],
[sed -e "s/FC_FUNC/MOAB_FC_FUNC/" src/FCDefs.h >src/MOAB_FCDefs.h])
@@ -1230,10 +1266,10 @@ AC_OUTPUT
AC_MSG_RESULT([C: $CC $CFLAGS $CPPFLAGS])
AC_MSG_RESULT([C++: $CXX $CXXFLAGS $CPPFLAGS])
if test "x" != "x$FC"; then
- AC_MSG_RESULT([Fortran: $FC $FCFLAGS])
+ AC_MSG_RESULT([Fortran90: $FC $FCFLAGS])
fi
if test "x" != "x$F77"; then
- AC_MSG_RESULT([Fortran: $F77 $FFLAGS])
+ AC_MSG_RESULT([Fortran77: $F77 $FFLAGS])
fi
if test "x$HAVE_HDF5" = "xno"; then
diff --git a/doc/DG/figure1.jpg b/doc/DG/figure1.jpg
new file mode 100644
index 0000000..e102a97
Binary files /dev/null and b/doc/DG/figure1.jpg differ
diff --git a/doc/DG/figure2.jpg b/doc/DG/figure2.jpg
new file mode 100644
index 0000000..7e8b199
Binary files /dev/null and b/doc/DG/figure2.jpg differ
diff --git a/doc/DG/figure3.jpg b/doc/DG/figure3.jpg
new file mode 100644
index 0000000..8810bfc
Binary files /dev/null and b/doc/DG/figure3.jpg differ
This diff is so big that we needed to truncate the remainder.
https://bitbucket.org/fathomteam/moab/commits/76dba12035f7/
Changeset: 76dba12035f7
Branch: Version4.6
User: iulian07
Date: 2014-05-22 23:12:03
Summary: tag the 4.6.3 release
Affected #: 1 file
diff --git a/configure.ac b/configure.ac
index afea93a..c1cfe4d 100644
--- a/configure.ac
+++ b/configure.ac
@@ -1,7 +1,7 @@
################################################################################
# Standard Stuff
################################################################################
-AC_INIT(MOAB, 4.6.3pre)
+AC_INIT(MOAB, 4.6.3)
AC_CONFIG_SRCDIR([moab.make.in])
AC_CONFIG_SRCDIR([MOABConfig.cmake.in])
AC_CONFIG_MACRO_DIR([config])
https://bitbucket.org/fathomteam/moab/commits/92ff419ba809/
Changeset: 92ff419ba809
Branch: master
User: iulian07
Date: 2014-05-23 05:52:09
Summary: target missing in examples makefile
introduced by mistake at a previous commit
Affected #: 1 file
diff --git a/examples/makefile b/examples/makefile
index 00d889b..787c8d3 100644
--- a/examples/makefile
+++ b/examples/makefile
@@ -71,9 +71,6 @@ VisTags: VisTags.o ${MOAB_LIBDIR}/libMOAB.la
ReadWriteTest: ReadWriteTest.o ${MOAB_LIBDIR}/libMOAB.la
${MOAB_CXX} -o $@ $< ${MOAB_LIBS_LINK}
-ptest: ptest.o ${MOAB_LIBDIR}/libMOAB.la
- ${MOAB_CXX} -o $@ $< ${MOAB_LIBS_LINK}
-
clean:
rm -rf *.o *.mod *.h5m ${EXAMPLES} ${PAREXAMPLES} ${EXOIIEXAMPLES} ${F90EXAMPLES}
Repository URL: https://bitbucket.org/fathomteam/moab/
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