[MOAB-dev] buildbot failure in moab-netcdf: failed test

Thu Mar 27 10:02:16 CDT 2014

Go ahead and make the changes to fix the tests Iulian.

If the test mesh files are not part of the repo, they should be. Paul, can
you commit those files to master directly (this should've been part of the
merge).

Vijay

On Thu, Mar 27, 2014 at 9:57 AM, Grindeanu, Iulian R. <iulian at mcs.anl.gov>wrote:

>   the mesh files are not part of distribution if they are not in
> EXTRA_DIST variable in Makefile.am in the mesh folder
> these tests are using (incorrectly) MESHDIR variable
> for example:
> test/dagmc/dagmc_simple_test.cpp
> #ifdef MESHDIR
> static const char input_file[] = STRINGIFY(MESHDIR) "/dagmc/test_geom.h5m";
> #else
> static const char input_file[] = STRINGIFY(MESHDIR) "/dagmc/test_geom.h5m";
> #endif
>
> I just noticed another problem with iGeom test file, it is missing too a
> reference.
>
> iGeom and dagmc need to be added in SUBDIRS variable in
> MeshFiles/unittest/Makefile.am
> And Makefile.am files need to be added to MeshFiles/unittest/iGeom and
> dagmc folders, with EXTRA_DIST variables in them
>  ------------------------------
> *From:* Vijay S. Mahadevan [vijay.m at gmail.com]
> *Sent:* Thursday, March 27, 2014 9:41 AM
> *To:* Grindeanu, Iulian R.; Paul Wilson
> *Cc:* moab-dev at mcs.anl.gov
> *Subject:* Re: [MOAB-dev] buildbot failure in moab-netcdf: failed test
>
>   Iuian, Does this need any changes in the test files to use MESHDIR
> variable like in the others to abstract out the actual location of the mesh
> files ?
>
>  Paul, please verify if the latest merge passed all tests on your end for
> an out-of-source build.
>
>  Vijay
>
>
> On Thu, Mar 27, 2014 at 9:00 AM, Grindeanu, Iulian R. <iulian at mcs.anl.gov>wrote:
>
>>  this particular error was caused by reliance on building with hdf5
>> these tests, that load an hdf5 file, need to be launched only when
>> building with hdf5
>> Some of the configurations in buildbot test moab without hdf5
>> (moab-netcdf, moab-bare) etc
>> example is this
>> if HDF5_FILE
>>   TESTS += mbfacet_test \
>>         gttool_test \
>>         cropvol_test \
>>         mergemesh_test \
>>         mbground_test \
>>         lloyd_smoother_test
>> endif
>> in test/Makefile.am
>>
>> distcheck fails because it is an out of source build, and the mesh files
>> that are loaded need to be included in the distribution  (EXTRA_DIST
>> variable in Makefile.am in mesh files directory)
>>  ------------------------------
>> *From:* moab-dev-bounces at mcs.anl.gov [moab-dev-bounces at mcs.anl.gov] on
>> behalf of moab-dev at mcs.anl.gov [moab-dev at mcs.anl.gov]
>> *Sent:* Thursday, March 27, 2014 1:08 AM
>> *To:* moab-dev at mcs.anl.gov
>> *Subject:* [MOAB-dev] buildbot failure in moab-netcdf: failed test
>>
>>    Fathom <http://gnep.mcs.anl.gov:8010/>: moab-netcdf<http://gnep.mcs.anl.gov:8010/builders/moab-netcdf>build
>> #309 <http://gnep.mcs.anl.gov:8010/builders/moab-netcdf/builds/309>
>> *Results:* failed test  *Buildslave:* gnep  *Revision:* None  *Reason:* The
>> Nightly scheduler named 'moab-netcdf' triggered this build  Log Excerpt
>>
>> dagmc_pointinvol_test.cpp:39:25: warning: integer constant is so large that it is unsigned
>> dagmc_pointinvol_test.cpp:39: warning: this decimal constant is unsigned only in ISO C90
>> dagmc_pointinvol_test.cpp:51:25: warning: integer constant is so large that it is unsigned
>> dagmc_pointinvol_test.cpp:51: warning: this decimal constant is unsigned only in ISO C90
>> dagmc_pointinvol_test.cpp:59:25: warning: integer constant is so large that it is unsigned
>> dagmc_pointinvol_test.cpp:59: warning: this decimal constant is unsigned only in ISO C90
>> dagmc_pointinvol_test.cpp:81:25: warning: integer constant is so large that it is unsigned
>> dagmc_pointinvol_test.cpp:81: warning: this decimal constant is unsigned only in ISO C90
>> dagmc_pointinvol_test.cpp:103:25: warning: integer constant is so large that it is unsigned
>> dagmc_pointinvol_test.cpp:103: warning: this decimal constant is unsigned only in ISO C90
>> dagmc_pointinvol_test.cpp:125:25: warning: integer constant is so large that it is unsigned
>> dagmc_pointinvol_test.cpp:125: warning: this decimal constant is unsigned only in ISO C90
>> dagmc_pointinvol_test.cpp:147:25: warning: integer constant is so large that it is unsigned
>> dagmc_pointinvol_test.cpp:147: warning: this decimal constant is unsigned only in ISO C90
>> dagmc_pointinvol_test.cpp:169:25: warning: integer constant is so large that it is unsigned
>> dagmc_pointinvol_test.cpp:169: warning: this decimal constant is unsigned only in ISO C90
>> dagmc_pointinvol_test.cpp:191:25: warning: integer constant is so large that it is unsigned
>> dagmc_pointinvol_test.cpp:191: warning: this decimal constant is unsigned only in ISO C90
>> dagmc_pointinvol_test.cpp:221:25: warning: integer constant is so large that it is unsigned
>> dagmc_pointinvol_test.cpp:221: warning: this decimal constant is unsigned only in ISO C90
>> dagmc_pointinvol_test.cpp:251:25: warning: integer constant is so large that it is unsigned
>> dagmc_pointinvol_test.cpp:251: warning: this decimal constant is unsigned only in ISO C90
>> dagmc_pointinvol_test.cpp:281:25: warning: integer constant is so large that it is unsigned
>> dagmc_pointinvol_test.cpp:281: warning: this decimal constant is unsigned only in ISO C90
>> dagmc_pointinvol_test.cpp:311:25: warning: integer constant is so large that it is unsigned
>> dagmc_pointinvol_test.cpp:311: warning: this decimal constant is unsigned only in ISO C90
>> dagmc_pointinvol_test.cpp:341:25: warning: integer constant is so large that it is unsigned
>> dagmc_pointinvol_test.cpp:341: warning: this decimal constant is unsigned only in ISO C90
>> dagmc_pointinvol_test.cpp:371:25: warning: integer constant is so large that it is unsigned
>> dagmc_pointinvol_test.cpp:371: warning: this decimal constant is unsigned only in ISO C90
>> dagmc_pointinvol_test.cpp:401:25: warning: integer constant is so large that it is unsigned
>> dagmc_pointinvol_test.cpp:401: warning: this decimal constant is unsigned only in ISO C90
>> dagmc_pointinvol_test.cpp: In function 'void dagmc_point_in()':
>> dagmc_pointinvol_test.cpp:52: warning: unused variable 'rval'
>> dagmc_pointinvol_test.cpp: In function 'void dagmc_setup_test()':
>> dagmc_pointinvol_test.cpp:38: warning: 'vol' may be used uninitialized in this function
>> mv -f .deps/dagmc_pointinvol_test-dagmc_pointinvol_test.Tpo .deps/dagmc_pointinvol_test-dagmc_pointinvol_test.Po
>> /bin/sh ../../libtool  --tag=CXX   --mode=link g++  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG  -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align  -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -L/home/fathom/3rdparty/netcdf/netcdf-4.0.1/serial/gcc/lib -lnetcdf -L/home/fathom/3rdparty/hdf5/hdf5-1.8.3/serial/gcc -lhdf5_hl -lhdf5 -L/home/fathom/3rdparty/zlib/zlib-1.2.4/gcc -lz      -o dagmc_pointinvol_test dagmc_pointinvol_test-dagmc_pointinvol_test.o ../../src/libMOAB.la ../../tools/dagmc/DagMC.lo -lm
>> libtool: link: g++ -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -Wall -pipe -pedantic -Wno-long-long -Wextra -Wcast-align -Wpointer-arith -Wformat -Wformat-security -Wshadow -Wunused-parameter -O2 -DNDEBUG -o dagmc_pointinvol_test dagmc_pointinvol_test-dagmc_pointinvol_test.o ../../tools/dagmc/DagMC.o  -L/home/fathom/3rdparty/netcdf/netcdf-4.0.1/serial/gcc/lib -L/home/fathom/3rdparty/hdf5/hdf5-1.8.3/serial/gcc/lib -L/home/fathom/3rdparty/zlib/zlib-1.2.4/gcc/lib -L/home/fathom/3rdparty/szip/szip-2.1/gcc/lib -L/home/fathom/3rdparty/hdf5/hdf5-1.8.3/serial/gcc -L/usr/lib/mpich/lib/ -L/home/fathom/3rdparty/zlib/zlib-1.2.4/gcc ../../src/.libs/libMOAB.a /home/fathom/3rdparty/netcdf/netcdf-4.0.1/serial/gcc/lib/libnetcdf.so /usr/lib/libhdf5_hl.so /usr/lib/libhdf5.so -lpthread -lz -lm -Wl,-rpath -Wl,/home/fathom/3rdparty/netcdf/netcdf-4.0.1/serial/gcc/lib -Wl,-rpath -Wl,/home/fathom/3rdpart
>>  y/netcdf/netcdf-4.0.1/serial/gcc/lib
>>  ...make  check-TESTS
>> make[4]: Entering directory `/disks/itaps-buildslave/moab-netcdf/build/test/dagmc'
>> make[5]: Entering directory `/disks/itaps-buildslave/moab-
>> netcdf/build/test/dagmc'
>> ?[0;31mFAIL?[m: dagmc_simple_test
>> ?[0;31mFAIL?[m: dagmc_rayfire_test
>> ?[0;31mFAIL?[m: dagmc_pointinvol_test
>> ?[0;31m=============================
>> 3 of 3 tests failed
>> See test/dagmc/test-suite.log
>> =============================
>> ?[mmake[5]: *** [test-suite.log] Error 1
>>
>>
>
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