[MOAB-dev] buildbot failure in Fathom on moab-serial

Thu Feb 17 02:03:44 CST 2011

Looks like gnep (or at least its buildbot instance) is going up and down like a yo-yo, so there may be a few more errors like this. If there are still problems Thursday afternoon, I'll take a look at it.

- Jim

On 02/17/11, moab-dev at mcs.anl.gov wrote:
> The Fathomatic has detected a failed build of moab-serial on Fathom.
> Full details are available at:
>  http://gnep.mcs.anl.gov:8010/builders/moab-serial/builds/421
> 
> Buildbot URL: http://gnep.mcs.anl.gov:8010/
> 
> Buildslave for this Build: gnep
> 
> Build Reason: The Nightly scheduler named 'nightly' triggered this build
> Build Source Stamp: None
> Blamelist: 
> 
> BUILD FAILED: failed failed slave lost
> 
> LOG EXCERPT:
> mv -f .deps/sphere_decomp.Tpo .deps/sphere_decomp.Po
> /bin/sh ../libtool --tag=CXX   --mode=link g++  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG   -o spheredecomp SphereDecomp.o sphere_decomp.o ../src/libMOAB.la -lm
> g++ -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -o spheredecomp SphereDecomp.o sphere_decomp.o  ../src/.libs/libMOAB.a -lnetcdf -L/usr/lib/mpich/lib/ /usr/lib/libhdf5.so -lpthread -lz -lm  
> g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I../src  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE -I../src -I../src -I../src/parallel -I../src/parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT surfplot.o -MD -MP -MF .deps/surfplot.Tpo -c -o surfplot.o surfplot.cpp
> mv -f .deps/surfplot.Tpo .deps/surfplot.Po
> /bin/sh ../libtool --tag=CXX   --mode=link g++  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG   -o mbsurfplot surfplot.o ../src/libMOAB.la -lm
> g++ -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -o mbsurfplot surfplot.o  ../src/.libs/libMOAB.a -lnetcdf -L/usr/lib/mpich/lib/ /usr/lib/libhdf5.so -lpthread -lz -lm  
> g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I../src  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE -I../src -I../src -I../src/parallel -I../src/parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT gsets.o -MD -MP -MF .deps/gsets.Tpo -c -o gsets.o gsets.cc
> mv -f .deps/gsets.Tpo .deps/gsets.Po
> /bin/sh ../libtool --tag=CXX   --mode=link g++  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG   -o mbgsets gsets.o ../src/libMOAB.la -lm
> g++ -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -o mbgsets gsets.o  ../src/.libs/libMOAB.a -lnetcdf -L/usr/lib/mpich/lib/ /usr/lib/libhdf5.so -lpthread -lz -lm  
>  ...
> Making all in dagmc
> make[4]: Entering directory `/disk/itaps-buildslave/moab-serial/build/tools/dagmc'
> /bin/sh ../../libtool --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE -I../../src -I../../src -I../../tools  -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT DagMC.lo -MD -MP -MF .deps/DagMC.Tpo -c -o DagMC.lo DagMC.cpp
>  g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -I../../src -I../../src -I../../tools -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT DagMC.lo -MD -MP -MF .deps/DagMC.Tpo -c DagMC.cpp -o DagMC.o
> mv -f .deps/DagMC.Tpo .deps/DagMC.Plo
> /bin/sh ../../libtool --tag=CXX   --mode=link g++  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG   -o libdagmc.la -rpath /usr/local/lib DagMC.lo  -lm
> mkdir .libs
> ar cru .libs/libdagmc.a  DagMC.o
> ranlib .libs/libdagmc.a
> creating libdagmc.la
> (cd .libs && rm -f libdagmc.la && ln -s ../libdagmc.la libdagmc.la)
> g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE -I../../src -I../../src -I../../tools  -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT dagmc_preproc.o -MD -MP -MF .deps/dagmc_preproc.Tpo -c -o dagmc_preproc.o dagmc_preproc.cpp
> mv -f .deps/dagmc_preproc.Tpo .deps/dagmc_preproc.Po
> /bin/sh ../../libtool --tag=CXX   --mode=link g++  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG   -o dagmc_preproc dagmc_preproc.o libdagmc.la ../../src/libMOAB.la    ../libprogram_opt.la -lm
> g++ -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -o dagmc_preproc dagmc_preproc.o  ./.libs/libdagmc.a ../../src/.libs/libMOAB.a -lnetcdf -L/usr/lib/mpich/lib/ /usr/lib/libhdf5.so -lpthread -lz ../.libs/libprogram_opt.a -lm  
> g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE -I../../src -I../../src -I../../tools  -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT quads_to_tris_driver.o -MD -MP -MF .deps/quads_to_tris_driver.Tpo -c -o quads_to_tris_driver.o quads_to_tris_driver.cpp
> mv -f .deps/quads_to_tris_driver.Tpo .deps/quads_to_tris_driver.Po
> g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE -I../../src -I../../src -I../../tools  -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT quads_to_tris.o -MD -MP -MF .deps/quads_to_tris.Tpo -c -o quads_to_tris.o quads_to_tris.cpp
> mv -f .deps/quads_to_tris.Tpo .deps/quads_to_tris.Po
> /bin/sh ../../libtool --tag=CXX   --mode=link g++  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG   -o quads_to_tris quads_to_tris_driver.o quads_to_tris.o ../../src/libMOAB.la -lm
> g++ -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -o quads_to_tris quads_to_tris_driver.o quads_to_tris.o  ../../src/.libs/libMOAB.a -lnetcdf -L/usr/lib/mpich/lib/ /usr/lib/libhdf5.so -lpthread -lz -lm  
>  ...
> Making all in mbfacetgeom
> make[4]: Entering directory `/disk/itaps-buildslave/moab-serial/build/tools/mbfacetgeom'
> /bin/sh ../../libtool --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -DMESHDIR=../../MeshFiles/unittest -I../../src -I../../src -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT FBEngine.lo -MD -MP -MF .deps/FBEngine.Tpo -c -o FBEngine.lo FBEngine.cpp
>  g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -DMESHDIR=../../MeshFiles/unittest -I../../src -I../../src -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT FBEngine.lo -MD -MP -MF .deps/FBEngine.Tpo -c FBEngine.cpp -o FBEngine.o
> FBEngine.cpp: In member function 'moab::ErrorCode FBEngine::getPntRayIntsct(double, double, double, double, double, double, std::vector<long unsigned int, std::allocator<long unsigned int> >&, std::vector<double, std::allocator<double> >&, std::vector<double, std::allocator<double> >&)':
> FBEngine.cpp:595: warning: comparison between signed and unsigned integer expressions
> FBEngine.cpp:605: warning: comparison between signed and unsigned integer expressions
> mv -f .deps/FBEngine.Tpo .deps/FBEngine.Plo
> /bin/sh ../../libtool --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -DMESHDIR=../../MeshFiles/unittest -I../../src -I../../src -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT SmoothCurve.lo -MD -MP -MF .deps/SmoothCurve.Tpo -c -o SmoothCurve.lo SmoothCurve.cpp
>  g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -DMESHDIR=../../MeshFiles/unittest -I../../src -I../../src -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT SmoothCurve.lo -MD -MP -MF .deps/SmoothCurve.Tpo -c SmoothCurve.cpp -o SmoothCurve.o
> SmoothCurve.cpp: In member function 'virtual bool SmoothCurve::is_periodic(double&)':
> SmoothCurve.cpp:53: warning: unused variable 'rval'
> SmoothCurve.cpp: In member function 'virtual bool SmoothCurve::position_from_u(double, double&, double&, double&)':
> SmoothCurve.cpp:124: warning: unused variable 'rval'
> SmoothCurve.cpp: In member function 'void SmoothCurve::compute_control_points_on_boundary_edges(double, std::map<long unsigned int, SmoothFace*, std::less<long unsigned int>, std::allocator<std::pair<const long unsigned int, SmoothFace*> > >&, moab::TagInfo*, moab::TagInfo*)':
> SmoothCurve.cpp:289: warning: comparison between signed and unsigned integer expressions
> SmoothCurve.cpp:367: warning: comparison between signed and unsigned integer expressions
> mv -f .deps/SmoothCurve.Tpo .deps/SmoothCurve.Plo
> 
> sincerely,
>  -The Fathomatic
> 
> 
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