[MOAB-dev] MOAB distcheck failed.
Nightly Test
kraftche at cae.wisc.edu
Fri Oct 3 02:01:40 CDT 2008
../FileTokenizer.cpp: In member function ‘bool FileTokenizer::get_binary(size_t, void*)’:
../FileTokenizer.cpp:471: warning: comparison between signed and unsigned integer expressions
../DualTool.cpp: In member function ‘MBErrorCode DualTool::split_pair_nonmanifold(MBEntityHandle*, MBEntityHandle*, MBEntityHandle*, std::vector<long unsigned int, std::allocator<long unsigned int> >*, std::vector<long unsigned int, std::allocator<long unsigned int> >*, MBEntityHandle*, MBEntityHandle*, MBEntityHandle*, MBEntityHandle*, MBEntityHandle*)’:
../DualTool.cpp:1976: warning: unused variable ‘cond1’
../DualTool.cpp:1985: warning: unused variable ‘cond2’
../DualTool.cpp: In member function ‘MBErrorCode DualTool::foc_get_stars(MBEntityHandle*, MBEntityHandle*, std::vector<long unsigned int, std::allocator<long unsigned int> >*, std::vector<long unsigned int, std::allocator<long unsigned int> >*)’:
../DualTool.cpp:2096: warning: ‘on_bdy’ may be used uninitialized in this function
../MBAdaptiveKDTree.cpp:1688: warning: ‘MBErrorCode closest_to_triangles(MBInterface*, MBEntityHandle, double, const MBCartVect&, std::vector<long unsigned int, std::allocator<long unsigned int> >&, std::vector<MBCartVect, std::allocator<MBCartVect> >&)’ defined but not used
../../../tools/tagprop/propagate_tags.cpp: In function ‘int main(int, char**)’:
../../../tools/tagprop/propagate_tags.cpp:157: warning: ‘data_tag.TagSpec::handle’ may be used uninitialized in this function
../../../tools/tagprop/propagate_tags.cpp:157: warning: ‘data_tag.TagSpec::value’ may be used uninitialized in this function
../../../tools/dagmc/DagMC.cpp: In member function ‘void DagMC::write_log(std::string, bool)’:
../../../tools/dagmc/DagMC.cpp:1060: warning: unused variable ‘success’
../MBTest.cpp: In function ‘MBErrorCode mb_temporary_test(MBInterface*)’:
../MBTest.cpp:659: warning: unused variable ‘num_adj’
../scdseq_test.cpp: In function ‘MBErrorCode evaluate_element_sequence(StructuredElementSeq*)’:
../scdseq_test.cpp:210: warning: ‘ktmp’ may be used uninitialized in this function
../scdseq_test.cpp:210: warning: ‘jtmp’ may be used uninitialized in this function
../scdseq_test.cpp:210: warning: ‘itmp’ may be used uninitialized in this function
../scdseq_test.cpp: In function ‘MBErrorCode evaluate_vertex_sequence(ScdVertexData*)’:
../scdseq_test.cpp:153: warning: ‘ktmp’ may be used uninitialized in this function
../scdseq_test.cpp:153: warning: ‘jtmp’ may be used uninitialized in this function
../scdseq_test.cpp:153: warning: ‘itmp’ may be used uninitialized in this function
../adaptive_kd_tree_tests.cpp: In function ‘bool create_simple_2d_tree(MBAdaptiveKDTree&, MBEntityHandle&, MBEntityHandle*)’:
../adaptive_kd_tree_tests.cpp:416: warning: unused variable ‘mb’
../kd_tree_test.cpp: In function ‘int main()’:
../kd_tree_test.cpp:71: warning: unused variable ‘volume’
../kd_tree_test.cpp:160: warning: unused variable ‘volume’
../kd_tree_test.cpp:78: warning: unused variable ‘num_leaves’
HDF5-DIAG: Error detected in HDF5 library version: 1.6.6 thread 47142988412624. Back trace follows.
#000: ../../../src/H5D.c line 1169 in H5Dopen(): not found
major(15): Dataset interface
minor(48): Object not found
#001: ../../../src/H5G.c line 1783 in H5G_find(): object not found
major(10): Symbol table layer
minor(48): Object not found
#002: ../../../src/H5Gtraverse.c line 395 in H5G_namei(): component not found
major(10): Symbol table layer
minor(48): Object not found
#003: ../../../src/H5Gstab.c line 161 in H5G_stab_find(): not found
major(10): Symbol table layer
minor(48): Object not found
#004: ../../../src/H5Gnode.c line 954 in H5G_node_found(): not found
major(10): Symbol table layer
minor(48): Object not found
HDF5-DIAG: Error detected in HDF5 library version: 1.6.6 thread 47142988412624. Back trace follows.
#000: ../../../src/H5D.c line 1169 in H5Dopen(): not found
major(15): Dataset interface
minor(48): Object not found
#001: ../../../src/H5G.c line 1783 in H5G_find(): object not found
major(10): Symbol table layer
minor(48): Object not found
#002: ../../../src/H5Gtraverse.c line 395 in H5G_namei(): component not found
major(10): Symbol table layer
minor(48): Object not found
#003: ../../../src/H5Gstab.c line 161 in H5G_stab_find(): not found
major(10): Symbol table layer
minor(48): Object not found
#004: ../../../src/H5Gnode.c line 954 in H5G_node_found(): not found
major(10): Symbol table layer
minor(48): Object not found
make[3]: *** [check-TESTS] Error 1
make[2]: *** [check-am] Error 2
make[1]: *** [check-recursive] Error 1
make: *** [distcheck] Error 2
pports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
(cached) (cached) checking how to hardcode library paths into programs... immediate
checking for gunzip... gunzip -c
checking for gzip... (cached) gunzip -c
checking for zcat... (cached) gunzip -c
checking if C++ compiler supports template specialization... yes
checking how to get verbose linking output from gfortran... -v
checking for Fortran libraries of gfortran... -L/usr/lib/gcc/x86_64-linux-gnu/4.3.1 -L/usr/lib/gcc/x86_64-linux-gnu/4.3.1/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.3.1/../../.. -lgfortranbegin -lgfortran -lm
checking for dummy main to link with Fortran libraries... none
checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore
checking for inttypes.h... (cached) yes
checking for stdint.h... (cached) yes
checking for sys/types.h... (cached) yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for stdlib.h... (cached) yes
checking for size_t... yes
checking for ptrdiff_t... yes
checking ieeefp.h usability... no
checking ieeefp.h presence... no
checking for ieeefp.h... no
checking for deflate in -lz... yes
checking for SZ_Decompress in -lsz... no
checking if HDF5 support is enabled... yes
checking hdf5.h usability... yes
checking hdf5.h presence... yes
checking for hdf5.h... yes
checking for H5Fopen in -lhdf5... yes
checking if NetCDF support is enabled... yes
checking strstream.h usability... no
checking strstream.h presence... no
checking for strstream.h... no
checking sstream.h usability... no
checking sstream.h presence... no
checking for sstream.h... no
checking strstream usability... yes
checking strstream presence... yes
checking for strstream... yes
checking netcdf.h usability... yes
checking netcdf.h presence... yes
checking for netcdf.h... yes
checking for netcdf.hh... yes
checking for netcdf_c++ library... yes
checking if mbconvert is to be built... yes
checking if hexmodops is to be built... yes
checking if mbchaco is to be built... no
checking if mbperf is to be built... yes
checking if qvdual is to be built... no
checking if mbsize is to be built... yes
checking if mbskin is to be built... yes
checking if mbtagprop is to be built... yes
checking if mcnpmit is to be built... no
checking if mbcoupler is to be built... no
checking if spheredecomp is to be built... yes
checking if mbsurfplot is to be built... yes
checking if mbzoltan is to be built... no
checking if dagmc is to be built... yes
checking if iMesh support is to be built... yes
configure: creating ./config.status
config.status: creating Makefile
config.status: creating moab.make
config.status: creating testdir.h
config.status: creating parallel/Makefile
config.status: creating mhdf/Makefile
config.status: creating test/Makefile
config.status: creating test/h5file/Makefile
config.status: creating test/dual/Makefile
config.status: creating test/obb/Makefile
config.status: creating test/perf/Makefile
config.status: creating tools/Makefile
config.status: creating tools/converter/Makefile
config.status: creating tools/hexmodops/Makefile
config.status: creating tools/iMesh/Makefile
config.status: creating tools/iMesh/iMesh-Defs.inc
config.status: creating tools/iMesh/SIDL/iMesh-SIDL-Defs.inc
config.status: creating tools/iMesh/SIDL/Makefile
config.status: creating tools/iMesh/SIDL/common.make
config.status: creating tools/mbperf/Makefile
config.status: creating tools/mbchaco/Makefile
config.status: creating tools/mbcoupler/Makefile
config.status: creating tools/mbzoltan/Config.moab
config.status: creating tools/mbzoltan/Makefile
config.status: creating tools/mcnpmit/Makefile
config.status: creating tools/qvdual/Makefile
config.status: creating tools/size/Makefile
config.status: creating tools/skin/Makefile
config.status: creating tools/tagprop/Makefile
config.status: creating tools/spheredecomp/Makefile
config.status: creating tools/surfplot/Makefile
config.status: creating tools/dagmc/Makefile
config.status: creating tools/dagmc/dagmc.make
config.status: creating doc/Makefile
config.status: creating doxygen/Makefile
config.status: creating config.h
config.status: creating MBVersion.h
config.status: creating MBEntityHandle.h
config.status: creating MBCN_FCDefs.h
config.status: executing depfiles commands
C: cc -Wall -pipe -O2 -DNDEBUG
C++: c++ -Wall -pipe -O2 -DNDEBUG
Fortran: gfortran -g -O2 -O2 -DNDEBUG
{ test ! -d moab-3.99 || { find moab-3.99 -type d ! -perm -200 -exec chmod u+w {} ';' && rm -fr moab-3.99; }; }
test -d moab-3.99 || mkdir moab-3.99
list='mhdf parallel . test tools doc doxygen'; for subdir in $list; do \
if test "$subdir" = .; then :; else \
test -d "moab-3.99/$subdir" \
|| /bin/mkdir -p "moab-3.99/$subdir" \
|| exit 1; \
distdir=`CDPATH="${ZSH_VERSION+.}:" && cd moab-3.99 && pwd`; \
top_distdir=`CDPATH="${ZSH_VERSION+.}:" && cd moab-3.99 && pwd`; \
(cd $subdir && \
make \
top_distdir="$top_distdir" \
distdir="$distdir/$subdir" \
am__remove_distdir=: \
am__skip_length_check=: \
distdir) \
|| exit 1; \
fi; \
done
make[1]: Entering directory `/home/jason/moab/test/dist/mhdf'
make[1]: Leaving directory `/home/jason/moab/test/dist/mhdf'
make[1]: Entering directory `/home/jason/moab/test/dist/parallel'
list=''; for subdir in $list; do \
if test "$subdir" = .; then :; else \
test -d "/home/jason/moab/test/dist/moab-3.99/parallel/$subdir" \
|| /bin/mkdir -p "/home/jason/moab/test/dist/moab-3.99/parallel/$subdir" \
|| exit 1; \
distdir=`CDPATH="${ZSH_VERSION+.}:" && cd /home/jason/moab/test/dist/moab-3.99/parallel && pwd`; \
top_distdir=`CDPATH="${ZSH_VERSION+.}:" && cd /home/jason/moab/test/dist/moab-3.99 && pwd`; \
(cd $subdir && \
make \
top_distdir="$top_distdir" \
distdir="$distdir/$subdir" \
am__remove_distdir=: \
am__skip_length_check=: \
distdir) \
|| exit 1; \
fi; \
done
make[1]: Leaving directory `/home/jason/moab/test/dist/parallel'
make[1]: Entering directory `/home/jason/moab/test/dist/test'
list='dual h5file obb perf'; for subdir in $list; do \
if test "$subdir" = .; then :; else \
test -d "/home/jason/moab/test/dist/moab-3.99/test/$subdir" \
|| /bin/mkdir -p "/home/jason/moab/test/dist/moab-3.99/test/$subdir" \
|| exit 1; \
distdir=`CDPATH="${ZSH_VERSION+.}:" && cd /home/jason/moab/test/dist/moab-3.99/test && pwd`; \
top_distdir=`CDPATH="${ZSH_VERSION+.}:" && cd /home/jason/moab/test/dist/moab-3.99 && pwd`; \
(cd $subdir && \
make \
top_distdir="$top_distdir" \
distdir="$distdir/$subdir" \
am__remove_distdir=: \
am__skip_length_check=: \
distdir) \
|| exit 1; \
fi; \
done
make[2]: Entering directory `/home/jason/moab/test/dist/test/dual'
make[2]: Leaving directory `/home/jason/moab/test/dist/test/dual'
make[2]: Entering directory `/home/jason/moab/test/dist/test/h5file'
make[2]: Leaving directory `/home/jason/moab/test/dist/test/h5file'
make[2]: Entering directory `/home/jason/moab/test/dist/test/obb'
make[2]: Leaving directory `/home/jason/moab/test/dist/test/obb'
make[2]: Entering directory `/home/jason/moab/test/dist/test/perf'
make[2]: Leaving directory `/home/jason/moab/test/dist/test/perf'
make[1]: Leaving directory `/home/jason/moab/test/dist/test'
make[1]: Entering directory `/home/jason/moab/test/dist/tools'
list='iMesh converter hexmodops mbchaco mbcoupler mbzoltan mbperf mcnpmit qvdual size skin tagprop spheredecomp surfplot dagmc'; for subdir in $list; do \
if test "$subdir" = .; then :; else \
test -d "/home/jason/moab/test/dist/moab-3.99/tools/$subdir" \
|| /bin/mkdir -p "/home/jason/moab/test/dist/moab-3.99/tools/$subdir" \
|| exit 1; \
distdir=`CDPATH="${ZSH_VERSION+.}:" && cd /home/jason/moab/test/dist/moab-3.99/tools && pwd`; \
top_distdir=`CDPATH="${ZSH_VERSION+.}:" && cd /home/jason/moab/test/dist/moab-3.99 && pwd`; \
(cd $subdir && \
make \
top_distdir="$top_distdir" \
distdir="$distdir/$subdir" \
am__remove_distdir=: \
am__skip_length_check=: \
distdir) \
|| exit 1; \
fi; \
done
make[2]: Entering directory `/home/jason/moab/test/dist/tools/iMesh'
list='. SIDL'; for subdir in $list; do \
if test "$subdir" = .; then :; else \
test -d "/home/jason/moab/test/dist/moab-3.99/tools/iMesh/$subdir" \
|| /bin/mkdir -p "/home/jason/moab/test/dist/moab-3.99/tools/iMesh/$subdir" \
|| exit 1; \
distdir=`CDPATH="${ZSH_VERSION+.}:" && cd /home/jason/moab/test/dist/moab-3.99/tools/iMesh && pwd`; \
top_distdir=`CDPATH="${ZSH_VERSION+.}:" && cd /home/jason/moab/test/dist/moab-3.99 && pwd`; \
(cd $subdir && \
make \
top_distdir="$top_distdir" \
distdir="$distdir/$subdir" \
am__remove_distdir=: \
am__skip_length_check=: \
distdir) \
|| exit 1; \
fi; \
done
make[3]: Entering directory `/home/jason/moab/test/dist/tools/iMesh/SIDL'
test -d /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL || /bin/mkdir -p /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL || exit 1
test -d /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/mserver || /bin/mkdir -p /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/mserver || exit 1
cp -p ../../../../src/tools/iMesh/SIDL/iBase.sidl /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/iBase.sidl
cp -p ../../../../src/tools/iMesh/SIDL/iMesh.sidl /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/iMesh.sidl
cp -p ../../../../src/tools/iMesh/SIDL/iMesh_SIDL.sidl /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/iMesh_SIDL.sidl
cp -p ../../../../src/tools/iMesh/SIDL/mserver/iBase_Error_Impl.cc /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/mserver/iBase_Error_Impl.cc
cp -p ../../../../src/tools/iMesh/SIDL/mserver/iBase_Error_Impl.hh /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/mserver/iBase_Error_Impl.hh
cp -p ../../../../src/tools/iMesh/SIDL/mserver/iMesh_SIDL_MeshSidl_Impl.cc /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/mserver/iMesh_SIDL_MeshSidl_Impl.cc
cp -p ../../../../src/tools/iMesh/SIDL/mserver/iMesh_SIDL_MeshSidl_Impl.hh /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/mserver/iMesh_SIDL_MeshSidl_Impl.hh
cp -p ../../../../src/tools/iMesh/SIDL/mserver/iMesh_Factory_Impl.cc /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/mserver/iMesh_Factory_Impl.cc
cp -p ../../../../src/tools/iMesh/SIDL/iBase_SIDL_defs.h /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/iBase_SIDL_defs.h
cp -p ../../../../src/tools/iMesh/SIDL/testcxx.cpp /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/testcxx.cpp
cp -p ../../../../src/tools/iMesh/SIDL/mserver.make /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/mserver.make
cp -p ../../../../src/tools/iMesh/SIDL/Cclient.make /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/Cclient.make
cp -p ../../../../src/tools/iMesh/SIDL/Fclient.make /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/Fclient.make
make[3]: Leaving directory `/home/jason/moab/test/dist/tools/iMesh/SIDL'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/iMesh'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/converter'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/converter'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/hexmodops'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/hexmodops'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/mbchaco'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/mbchaco'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/mbcoupler'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/mbcoupler'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/mbzoltan'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/mbzoltan'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/mbperf'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/mbperf'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/mcnpmit'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/mcnpmit'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/qvdual'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/qvdual'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/size'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/size'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/skin'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/skin'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/tagprop'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/tagprop'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/spheredecomp'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/spheredecomp'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/surfplot'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/surfplot'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/dagmc'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/dagmc'
make[1]: Leaving directory `/home/jason/moab/test/dist/tools'
make[1]: Entering directory `/home/jason/moab/test/dist/doc'
make[1]: Leaving directory `/home/jason/moab/test/dist/doc'
make[1]: Entering directory `/home/jason/moab/test/dist/doxygen'
make[1]: Leaving directory `/home/jason/moab/test/dist/doxygen'
find moab-3.99 -type d ! -perm -777 -exec chmod a+rwx {} \; -o \
! -type d ! -perm -444 -links 1 -exec chmod a+r {} \; -o \
! -type d ! -perm -400 -exec chmod a+r {} \; -o \
! -type d ! -perm -444 -exec /bin/sh /home/jason/moab/test/src/install-sh -c -m a+r {} {} \; \
|| chmod -R a+r moab-3.99
tardir=moab-3.99 && /bin/sh /home/jason/moab/test/src/missing --run tar chof - "$tardir" | GZIP=--best gzip -c >moab-3.99.tar.gz
{ test ! -d moab-3.99 || { find moab-3.99 -type d ! -perm -200 -exec chmod u+w {} ';' && rm -fr moab-3.99; }; }
case 'moab-3.99.tar.gz' in \
*.tar.gz*) \
GZIP=--best gunzip -c moab-3.99.tar.gz | /bin/sh /home/jason/moab/test/src/missing --run tar xf - ;;\
*.tar.bz2*) \
bunzip2 -c moab-3.99.tar.bz2 | /bin/sh /home/jason/moab/test/src/missing --run tar xf - ;;\
*.tar.lzma*) \
unlzma -c moab-3.99.tar.lzma | /bin/sh /home/jason/moab/test/src/missing --run tar xf - ;;\
*.tar.Z*) \
uncompress -c moab-3.99.tar.Z | /bin/sh /home/jason/moab/test/src/missing --run tar xf - ;;\
*.shar.gz*) \
GZIP=--best gunzip -c moab-3.99.shar.gz | unshar ;;\
*.zip*) \
unzip moab-3.99.zip ;;\
esac
chmod -R a-w moab-3.99; chmod a+w moab-3.99
mkdir moab-3.99/_build
mkdir moab-3.99/_inst
chmod a-w moab-3.99
dc_install_base=`CDPATH="${ZSH_VERSION+.}:" && cd moab-3.99/_inst && pwd | sed -e 's,^[^:\\/]:[\\/],/,'` \
&& dc_destdir="${TMPDIR-/tmp}/am-dc-$$/" \
&& cd moab-3.99/_build \
&& ../configure --srcdir=.. --prefix="$dc_install_base" \
\
&& make \
&& make dvi \
&& make check \
&& make install \
&& make installcheck \
&& make uninstall \
&& make distuninstallcheck_dir="$dc_install_base" \
distuninstallcheck \
&& chmod -R a-w "$dc_install_base" \
&& ({ \
(cd ../.. && umask 077 && mkdir "$dc_destdir") \
&& make DESTDIR="$dc_destdir" install \
&& make DESTDIR="$dc_destdir" uninstall \
&& make DESTDIR="$dc_destdir" \
distuninstallcheck_dir="$dc_destdir" distuninstallcheck; \
} || { rm -rf "$dc_destdir"; exit 1; }) \
&& rm -rf "$dc_destdir" \
&& make dist \
&& rm -rf moab-3.99.tar.gz \
&& make distcleancheck
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking target system type... x86_64-unknown-linux-gnu
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking for style of include used by make... GNU
checking for cc... cc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether cc accepts -g... yes
checking for cc option to accept ISO C89... none needed
checking dependency style of cc... gcc3
checking how to run the C preprocessor... cc -E
checking for CC... no
checking for aCC... no
checking for cxx... no
checking for xlC_r... no
checking for xlC... no
checking for c++... c++
checking whether we are using the GNU C++ compiler... yes
checking whether c++ accepts -g... yes
checking dependency style of c++... gcc3
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checking whether gfortran accepts -g... yes
checking for known C compilers... GNU
checking for known compiler/OS combinations... GNU:x86_64
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checking how to recognize dependent libraries... pass_all
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configure: creating libtool
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configure: creating ./config.status
config.status: creating Makefile
config.status: creating moab.make
config.status: creating testdir.h
config.status: creating parallel/Makefile
config.status: creating mhdf/Makefile
config.status: creating test/Makefile
config.status: creating test/h5file/Makefile
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config.status: creating tools/iMesh/SIDL/iMesh-SIDL-Defs.inc
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config.status: creating tools/mbperf/Makefile
config.status: creating tools/mbchaco/Makefile
config.status: creating tools/mbcoupler/Makefile
config.status: creating tools/mbzoltan/Config.moab
config.status: creating tools/mbzoltan/Makefile
config.status: creating tools/mcnpmit/Makefile
config.status: creating tools/qvdual/Makefile
config.status: creating tools/size/Makefile
config.status: creating tools/skin/Makefile
config.status: creating tools/tagprop/Makefile
config.status: creating tools/spheredecomp/Makefile
config.status: creating tools/surfplot/Makefile
config.status: creating tools/dagmc/Makefile
config.status: creating tools/dagmc/dagmc.make
config.status: creating doc/Makefile
config.status: creating doxygen/Makefile
config.status: creating config.h
config.status: creating MBVersion.h
config.status: creating MBEntityHandle.h
config.status: creating MBCN_FCDefs.h
config.status: executing depfiles commands
C: cc -Wall -pipe -O2 -DNDEBUG
C++: c++ -Wall -pipe -O2 -DNDEBUG
Fortran: gfortran -g -O2 -O2 -DNDEBUG
make[1]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build'
make all-recursive
make[2]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build'
Making all in mhdf
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/mhdf'
/bin/sh ../libtool --tag=CC --mode=compile cc -I../../mhdf/include -I. -I../../mhdf -I.. -Wall -pipe -O2 -DNDEBUG -MT adjacency.lo -MD -MP -MF .deps/adjacency.Tpo -c -o adjacency.lo `test -f 'src/adjacency.c' || echo '../../mhdf/'`src/adjacency.c
/bin/sh ../libtool --tag=CC --mode=compile cc -I../../mhdf/include -I. -I../../mhdf -I.. -Wall -pipe -O2 -DNDEBUG -MT connectivity.lo -MD -MP -MF .deps/connectivity.Tpo -c -o connectivity.lo `test -f 'src/connectivity.c' || echo '../../mhdf/'`src/connectivity.c
/bin/sh ../libtool --tag=CC --mode=compile cc -I../../mhdf/include -I. -I../../mhdf -I.. -Wall -pipe -O2 -DNDEBUG -MT file-handle.lo -MD -MP -MF .deps/file-handle.Tpo -c -o file-handle.lo `test -f 'src/file-handle.c' || echo '../../mhdf/'`src/file-handle.c
/bin/sh ../libtool --tag=CC --mode=compile cc -I../../mhdf/include -I. -I../../mhdf -I.. -Wall -pipe -O2 -DNDEBUG -MT file.lo -MD -MP -MF .deps/file.Tpo -c -o file.lo `test -f 'src/file.c' || echo '../../mhdf/'`src/file.c
/bin/sh ../libtool --tag=CC --mode=compile cc -I../../mhdf/include -I. -I../../mhdf -I.. -Wall -pipe -O2 -DNDEBUG -MT nodes.lo -MD -MP -MF .deps/nodes.Tpo -c -o nodes.lo `test -f 'src/nodes.c' || echo '../../mhdf/'`src/nodes.c
/bin/sh ../libtool --tag=CC --mode=compile cc -I../../mhdf/include -I. -I../../mhdf -I.. -Wall -pipe -O2 -DNDEBUG -MT sets.lo -MD -MP -MF .deps/sets.Tpo -c -o sets.lo `test -f 'src/sets.c' || echo '../../mhdf/'`src/sets.c
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/bin/sh ../libtool --tag=CC --mode=compile cc -I../../mhdf/include -I. -I../../mhdf -I.. -Wall -pipe -O2 -DNDEBUG -MT tags.lo -MD -MP -MF .deps/tags.Tpo -c -o tags.lo `test -f 'src/tags.c' || echo '../../mhdf/'`src/tags.c
cc -I../../mhdf/include -I. -I../../mhdf -I.. -Wall -pipe -O2 -DNDEBUG -MT file.lo -MD -MP -MF .deps/file.Tpo -c ../../mhdf/src/file.c -o file.o
cc -I../../mhdf/include -I. -I../../mhdf -I.. -Wall -pipe -O2 -DNDEBUG -MT sets.lo -MD -MP -MF .deps/sets.Tpo -c ../../mhdf/src/sets.c -o sets.o
cc -I../../mhdf/include -I. -I../../mhdf -I.. -Wall -pipe -O2 -DNDEBUG -MT status.lo -MD -MP -MF .deps/status.Tpo -c ../../mhdf/src/status.c -o status.o
cc -I../../mhdf/include -I. -I../../mhdf -I.. -Wall -pipe -O2 -DNDEBUG -MT nodes.lo -MD -MP -MF .deps/nodes.Tpo -c ../../mhdf/src/nodes.c -o nodes.o
cc -I../../mhdf/include -I. -I../../mhdf -I.. -Wall -pipe -O2 -DNDEBUG -MT adjacency.lo -MD -MP -MF .deps/adjacency.Tpo -c ../../mhdf/src/adjacency.c -o adjacency.o
cc -I../../mhdf/include -I. -I../../mhdf -I.. -Wall -pipe -O2 -DNDEBUG -MT file-handle.lo -MD -MP -MF .deps/file-handle.Tpo -c ../../mhdf/src/file-handle.c -o file-handle.o
cc -I../../mhdf/include -I. -I../../mhdf -I.. -Wall -pipe -O2 -DNDEBUG -MT tags.lo -MD -MP -MF .deps/tags.Tpo -c ../../mhdf/src/tags.c -o tags.o
cc -I../../mhdf/include -I. -I../../mhdf -I.. -Wall -pipe -O2 -DNDEBUG -MT connectivity.lo -MD -MP -MF .deps/connectivity.Tpo -c ../../mhdf/src/connectivity.c -o connectivity.o
mv -f .deps/adjacency.Tpo .deps/adjacency.Plo
mv -f .deps/file-handle.Tpo .deps/file-handle.Plo
/bin/sh ../libtool --tag=CC --mode=compile cc -I../../mhdf/include -I. -I../../mhdf -I.. -Wall -pipe -O2 -DNDEBUG -MT util.lo -MD -MP -MF .deps/util.Tpo -c -o util.lo `test -f 'src/util.c' || echo '../../mhdf/'`src/util.c
mv -f .deps/nodes.Tpo .deps/nodes.Plo
mv -f .deps/status.Tpo .deps/status.Plo
cc -I../../mhdf/include -I. -I../../mhdf -I.. -Wall -pipe -O2 -DNDEBUG -MT util.lo -MD -MP -MF .deps/util.Tpo -c ../../mhdf/src/util.c -o util.o
mv -f .deps/sets.Tpo .deps/sets.Plo
mv -f .deps/connectivity.Tpo .deps/connectivity.Plo
mv -f .deps/file.Tpo .deps/file.Plo
mv -f .deps/tags.Tpo .deps/tags.Plo
mv -f .deps/util.Tpo .deps/util.Plo
/bin/sh ../libtool --tag=CC --mode=link cc -Wall -pipe -O2 -DNDEBUG -lm -o libmhdf.la adjacency.lo connectivity.lo file-handle.lo file.lo nodes.lo sets.lo status.lo tags.lo util.lo -lhdf5 -lm
mkdir .libs
ar cru .libs/libmhdf.a adjacency.o connectivity.o file-handle.o file.o nodes.o sets.o status.o tags.o util.o
ranlib .libs/libmhdf.a
creating libmhdf.la
(cd .libs && rm -f libmhdf.la && ln -s ../libmhdf.la libmhdf.la)
make[3]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/mhdf'
Making all in .
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build'
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT AEntityFactory.lo -MD -MP -MF .deps/AEntityFactory.Tpo -c -o AEntityFactory.lo ../AEntityFactory.cpp
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c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT AEntityFactory.lo -MD -MP -MF .deps/AEntityFactory.Tpo -c ../AEntityFactory.cpp -o AEntityFactory.o
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT HigherOrderFactory.lo -MD -MP -MF .deps/HigherOrderFactory.Tpo -c ../HigherOrderFactory.cpp -o HigherOrderFactory.o
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT GeomTopoTool.lo -MD -MP -MF .deps/GeomTopoTool.Tpo -c ../GeomTopoTool.cpp -o GeomTopoTool.o
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT FileTokenizer.lo -MD -MP -MF .deps/FileTokenizer.Tpo -c ../FileTokenizer.cpp -o FileTokenizer.o
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT FileOptions.lo -MD -MP -MF .deps/FileOptions.Tpo -c ../FileOptions.cpp -o FileOptions.o
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c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT EntitySequence.lo -MD -MP -MF .deps/EntitySequence.Tpo -c ../EntitySequence.cpp -o EntitySequence.o
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT ExoIIUtil.lo -MD -MP -MF .deps/ExoIIUtil.Tpo -c ../ExoIIUtil.cpp -o ExoIIUtil.o
mv -f .deps/GeomTopoTool.Tpo .deps/GeomTopoTool.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT MBAdaptiveKDTree.lo -MD -MP -MF .deps/MBAdaptiveKDTree.Tpo -c -o MBAdaptiveKDTree.lo ../MBAdaptiveKDTree.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT DualTool.lo -MD -MP -MF .deps/DualTool.Tpo -c ../DualTool.cpp -o DualTool.o
mv -f .deps/FileOptions.Tpo .deps/FileOptions.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT MBAffineXform.lo -MD -MP -MF .deps/MBAffineXform.Tpo -c -o MBAffineXform.lo ../MBAffineXform.cpp
mv -f .deps/EntitySequence.Tpo .deps/EntitySequence.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT MBAlloc.lo -MD -MP -MF .deps/MBAlloc.Tpo -c -o MBAlloc.lo ../MBAlloc.cpp
mv -f .deps/ExoIIUtil.Tpo .deps/ExoIIUtil.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT MBAxisBox.lo -MD -MP -MF .deps/MBAxisBox.Tpo -c -o MBAxisBox.lo ../MBAxisBox.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT HomXform.lo -MD -MP -MF .deps/HomXform.Tpo -c ../HomXform.cpp -o HomXform.o
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT MBAdaptiveKDTree.lo -MD -MP -MF .deps/MBAdaptiveKDTree.Tpo -c ../MBAdaptiveKDTree.cpp -o MBAdaptiveKDTree.o
mv -f .deps/HigherOrderFactory.Tpo .deps/HigherOrderFactory.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT MBBits.lo -MD -MP -MF .deps/MBBits.Tpo -c -o MBBits.lo ../MBBits.cpp
mv -f .deps/HomXform.Tpo .deps/HomXform.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT MBBSPTree.lo -MD -MP -MF .deps/MBBSPTree.Tpo -c -o MBBSPTree.lo ../MBBSPTree.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT MBAlloc.lo -MD -MP -MF .deps/MBAlloc.Tpo -c ../MBAlloc.cpp -o MBAlloc.o
mv -f .deps/AEntityFactory.Tpo .deps/AEntityFactory.Plo
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mv -f .deps/MBAlloc.Tpo .deps/MBAlloc.Plo
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/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT TagInfo.lo -MD -MP -MF .deps/TagInfo.Tpo -c -o TagInfo.lo ../TagInfo.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT StructuredElementSeq.lo -MD -MP -MF .deps/StructuredElementSeq.Tpo -c ../StructuredElementSeq.cpp -o StructuredElementSeq.o
mv -f .deps/ScdElementData.Tpo .deps/ScdElementData.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT TagServer.lo -MD -MP -MF .deps/TagServer.Tpo -c -o TagServer.lo ../TagServer.cpp
mv -f .deps/ReadSTL.Tpo .deps/ReadSTL.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT Tqdcfr.lo -MD -MP -MF .deps/Tqdcfr.Tpo -c -o Tqdcfr.lo ../Tqdcfr.cpp
mv -f .deps/SparseTagSuperCollection.Tpo .deps/SparseTagSuperCollection.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT TypeSequenceManager.lo -MD -MP -MF .deps/TypeSequenceManager.Tpo -c -o TypeSequenceManager.lo ../TypeSequenceManager.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT SparseTagCollection.lo -MD -MP -MF .deps/SparseTagCollection.Tpo -c ../SparseTagCollection.cpp -o SparseTagCollection.o
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT TagInfo.lo -MD -MP -MF .deps/TagInfo.Tpo -c ../TagInfo.cpp -o TagInfo.o
mv -f .deps/StructuredElementSeq.Tpo .deps/StructuredElementSeq.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT UnstructuredElemSeq.lo -MD -MP -MF .deps/UnstructuredElemSeq.Tpo -c -o UnstructuredElemSeq.lo ../UnstructuredElemSeq.cpp
mv -f .deps/TagInfo.Tpo .deps/TagInfo.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT VertexSequence.lo -MD -MP -MF .deps/VertexSequence.Tpo -c -o VertexSequence.lo ../VertexSequence.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT TagServer.lo -MD -MP -MF .deps/TagServer.Tpo -c ../TagServer.cpp -o TagServer.o
mv -f .deps/ReadVtk.Tpo .deps/ReadVtk.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT VtkUtil.lo -MD -MP -MF .deps/VtkUtil.Tpo -c -o VtkUtil.lo ../VtkUtil.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT Tqdcfr.lo -MD -MP -MF .deps/Tqdcfr.Tpo -c ../Tqdcfr.cpp -o Tqdcfr.o
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT TypeSequenceManager.lo -MD -MP -MF .deps/TypeSequenceManager.Tpo -c ../TypeSequenceManager.cpp -o TypeSequenceManager.o
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT VertexSequence.lo -MD -MP -MF .deps/VertexSequence.Tpo -c ../VertexSequence.cpp -o VertexSequence.o
mv -f .deps/SparseTagCollection.Tpo .deps/SparseTagCollection.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT WriteAns.lo -MD -MP -MF .deps/WriteAns.Tpo -c -o WriteAns.lo ../WriteAns.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT UnstructuredElemSeq.lo -MD -MP -MF .deps/UnstructuredElemSeq.Tpo -c ../UnstructuredElemSeq.cpp -o UnstructuredElemSeq.o
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT VtkUtil.lo -MD -MP -MF .deps/VtkUtil.Tpo -c ../VtkUtil.cpp -o VtkUtil.o
mv -f .deps/SequenceManager.Tpo .deps/SequenceManager.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT WriteGMV.lo -MD -MP -MF .deps/WriteGMV.Tpo -c -o WriteGMV.lo ../WriteGMV.cpp
mv -f .deps/VtkUtil.Tpo .deps/VtkUtil.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT WriteGmsh.lo -MD -MP -MF .deps/WriteGmsh.Tpo -c -o WriteGmsh.lo ../WriteGmsh.cpp
mv -f .deps/VertexSequence.Tpo .deps/VertexSequence.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT WriteSTL.lo -MD -MP -MF .deps/WriteSTL.Tpo -c -o WriteSTL.lo ../WriteSTL.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT WriteGmsh.lo -MD -MP -MF .deps/WriteGmsh.Tpo -c ../WriteGmsh.cpp -o WriteGmsh.o
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT WriteAns.lo -MD -MP -MF .deps/WriteAns.Tpo -c ../WriteAns.cpp -o WriteAns.o
mv -f .deps/UnstructuredElemSeq.Tpo .deps/UnstructuredElemSeq.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT WriteTemplate.lo -MD -MP -MF .deps/WriteTemplate.Tpo -c -o WriteTemplate.lo ../WriteTemplate.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT WriteGMV.lo -MD -MP -MF .deps/WriteGMV.Tpo -c ../WriteGMV.cpp -o WriteGMV.o
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT WriteSTL.lo -MD -MP -MF .deps/WriteSTL.Tpo -c ../WriteSTL.cpp -o WriteSTL.o
mv -f .deps/TypeSequenceManager.Tpo .deps/TypeSequenceManager.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT WriteVtk.lo -MD -MP -MF .deps/WriteVtk.Tpo -c -o WriteVtk.lo ../WriteVtk.cpp
mv -f .deps/TagServer.Tpo .deps/TagServer.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT ReadNCDF.lo -MD -MP -MF .deps/ReadNCDF.Tpo -c -o ReadNCDF.lo ../ReadNCDF.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT WriteTemplate.lo -MD -MP -MF .deps/WriteTemplate.Tpo -c ../WriteTemplate.cpp -o WriteTemplate.o
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT WriteVtk.lo -MD -MP -MF .deps/WriteVtk.Tpo -c ../WriteVtk.cpp -o WriteVtk.o
mv -f .deps/WriteGmsh.Tpo .deps/WriteGmsh.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT WriteNCDF.lo -MD -MP -MF .deps/WriteNCDF.Tpo -c -o WriteNCDF.lo ../WriteNCDF.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT ReadNCDF.lo -MD -MP -MF .deps/ReadNCDF.Tpo -c ../ReadNCDF.cpp -o ReadNCDF.o
mv -f .deps/WriteSTL.Tpo .deps/WriteSTL.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT WriteSLAC.lo -MD -MP -MF .deps/WriteSLAC.Tpo -c -o WriteSLAC.lo ../WriteSLAC.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT WriteNCDF.lo -MD -MP -MF .deps/WriteNCDF.Tpo -c ../WriteNCDF.cpp -o WriteNCDF.o
mv -f .deps/WriteGMV.Tpo .deps/WriteGMV.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT ReadHDF5.lo -MD -MP -MF .deps/ReadHDF5.Tpo -c -o ReadHDF5.lo ../ReadHDF5.cpp
mv -f .deps/WriteAns.Tpo .deps/WriteAns.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT WriteHDF5.lo -MD -MP -MF .deps/WriteHDF5.Tpo -c -o WriteHDF5.lo ../WriteHDF5.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT WriteSLAC.lo -MD -MP -MF .deps/WriteSLAC.Tpo -c ../WriteSLAC.cpp -o WriteSLAC.o
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT ReadHDF5.lo -MD -MP -MF .deps/ReadHDF5.Tpo -c ../ReadHDF5.cpp -o ReadHDF5.o
mv -f .deps/WriteTemplate.Tpo .deps/WriteTemplate.Plo
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT WriteHDF5.lo -MD -MP -MF .deps/WriteHDF5.Tpo -c ../WriteHDF5.cpp -o WriteHDF5.o
mv -f .deps/WriteVtk.Tpo .deps/WriteVtk.Plo
mv -f .deps/Tqdcfr.Tpo .deps/Tqdcfr.Plo
mv -f .deps/ReadNCDF.Tpo .deps/ReadNCDF.Plo
mv -f .deps/ReadHDF5.Tpo .deps/ReadHDF5.Plo
mv -f .deps/WriteSLAC.Tpo .deps/WriteSLAC.Plo
mv -f .deps/WriteNCDF.Tpo .deps/WriteNCDF.Plo
mv -f .deps/WriteHDF5.Tpo .deps/WriteHDF5.Plo
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o libMOAB.la -rpath /home/jason/moab/test/dist/moab-3.99/_inst/lib AEntityFactory.lo DualTool.lo EntitySequence.lo ExoIIUtil.lo FileOptions.lo FileTokenizer.lo GeomTopoTool.lo HigherOrderFactory.lo HomXform.lo MBAdaptiveKDTree.lo MBAffineXform.lo MBAlloc.lo MBAxisBox.lo MBBits.lo MBBSPTree.lo MBCN.lo MBCartVect.lo MBMatrix3.lo MBCore.lo MBFactory.lo MBGeomUtil.lo MBMeshSet.lo MBOrientedBox.lo MBOrientedBoxTreeTool.lo MBRange.lo MBRangeSeqIntersectIter.lo MBReadUtil.lo MBReaderWriterSet.lo MBSkinner.lo MBSysUtil.lo MBUtil.lo MBWriteUtil.lo MeshSetSequence.lo MeshTopoUtil.lo PolyElementSeq.lo ReadGmsh.lo ReadSTL.lo ReadVtk.lo ReadIDEAS.lo ScdElementData.lo ScdVertexData.lo SequenceData.lo SequenceManager.lo SparseTagSuperCollection.lo SparseTagCollection.lo StructuredElementSeq.lo TagInfo.lo TagServer.lo Tqdcfr.lo TypeSequenceManager.lo UnstructuredElemSeq.lo VertexSequence.lo VtkUtil.lo WriteAns.lo !
WriteGMV.lo WriteGmsh.lo WriteSTL.lo WriteTemplate.lo WriteVtk.lo ReadNCDF.lo WriteNCDF.lo WriteSLAC.lo ReadHDF5.lo WriteHDF5.lo -lnetcdf_c++ -lnetcdf -lhdf5 ./mhdf/libmhdf.la -lm
mkdir .libs
rm -fr .libs/libMOAB.lax
mkdir .libs/libMOAB.lax
rm -fr .libs/libMOAB.lax/libmhdf.a
mkdir .libs/libMOAB.lax/libmhdf.a
(cd .libs/libMOAB.lax/libmhdf.a && ar x /home/jason/moab/test/dist/moab-3.99/_build/./mhdf/.libs/libmhdf.a)
ar cru .libs/libMOAB.a AEntityFactory.o DualTool.o EntitySequence.o ExoIIUtil.o FileOptions.o FileTokenizer.o GeomTopoTool.o HigherOrderFactory.o HomXform.o MBAdaptiveKDTree.o MBAffineXform.o MBAlloc.o MBAxisBox.o MBBits.o MBBSPTree.o MBCN.o MBCartVect.o MBMatrix3.o MBCore.o MBFactory.o MBGeomUtil.o MBMeshSet.o MBOrientedBox.o MBOrientedBoxTreeTool.o MBRange.o MBRangeSeqIntersectIter.o MBReadUtil.o MBReaderWriterSet.o MBSkinner.o MBSysUtil.o MBUtil.o MBWriteUtil.o MeshSetSequence.o MeshTopoUtil.o PolyElementSeq.o ReadGmsh.o ReadSTL.o ReadVtk.o ReadIDEAS.o ScdElementData.o ScdVertexData.o SequenceData.o SequenceManager.o SparseTagSuperCollection.o SparseTagCollection.o StructuredElementSeq.o TagInfo.o TagServer.o Tqdcfr.o TypeSequenceManager.o UnstructuredElemSeq.o VertexSequence.o VtkUtil.o WriteAns.o WriteGMV.o WriteGmsh.o WriteSTL.o WriteTemplate.o WriteVtk.o ReadNCDF.o WriteNCDF.o WriteSLAC.o ReadHDF5.o WriteHDF5.o .libs/libMOAB.lax/libmhdf.a/adjacency.o .libs/libMOAB.l!
ax/libmhdf.a/file-handle.o .libs/libMOAB.lax/libmhdf.a/status.o .libs/libMOAB.lax/libmhdf.a/tags.o .libs/libMOAB.lax/libmhdf.a/file.o .libs/libMOAB.lax/libmhdf.a/nodes.o .libs/libMOAB.lax/libmhdf.a/sets.o .libs/libMOAB.lax/libmhdf.a/connectivity.o .libs/libMOAB.lax/libmhdf.a/util.o
ranlib .libs/libMOAB.a
rm -fr .libs/libMOAB.lax
creating libMOAB.la
(cd .libs && rm -f libMOAB.la && ln -s ../libMOAB.la libMOAB.la)
make[3]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build'
Making all in test
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/test'
Making all in dual
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/test/dual'
make[4]: Nothing to be done for `all'.
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/test/dual'
Making all in h5file
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/test/h5file'
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make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/test/h5file'
Making all in obb
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/test/obb'
make[4]: Nothing to be done for `all'.
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/test/obb'
Making all in perf
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/test/perf'
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make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/test/perf'
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make[4]: Nothing to be done for `all-am'.
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make[3]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/test'
Making all in tools
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools'
Making all in iMesh
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/iMesh'
Making all in .
make[5]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/iMesh'
/bin/sh ../../libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../../tools/iMesh -I../.. -I../../.. -I../.. -I. -Wall -pipe -O2 -DNDEBUG -MT iMesh_MOAB.lo -MD -MP -MF .deps/iMesh_MOAB.Tpo -c -o iMesh_MOAB.lo ../../../tools/iMesh/iMesh_MOAB.cpp
c++ -DHAVE_CONFIG_H -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../../tools/iMesh -I../.. -I../../.. -I../.. -I. -Wall -pipe -O2 -DNDEBUG -MT iMesh_MOAB.lo -MD -MP -MF .deps/iMesh_MOAB.Tpo -c ../../../tools/iMesh/iMesh_MOAB.cpp -o iMesh_MOAB.o
mv -f .deps/iMesh_MOAB.Tpo .deps/iMesh_MOAB.Plo
/bin/sh ../../libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o libiMesh.la -rpath /home/jason/moab/test/dist/moab-3.99/_inst/lib iMesh_MOAB.lo ../../libMOAB.la -lm
mkdir .libs
ar cru .libs/libiMesh.a iMesh_MOAB.o
ranlib .libs/libiMesh.a
creating libiMesh.la
(cd .libs && rm -f libiMesh.la && ln -s ../libiMesh.la libiMesh.la)
make[5]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/iMesh'
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/iMesh'
Making all in converter
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/converter'
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../../tools/converter -I../.. -I../../.. -I../.. -Wall -pipe -O2 -DNDEBUG -MT convert.o -MD -MP -MF .deps/convert.Tpo -c -o convert.o ../../../tools/converter/convert.cpp
mv -f .deps/convert.Tpo .deps/convert.Po
/bin/sh ../../libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o mbconvert convert.o ../../libMOAB.la -lm
mkdir .libs
c++ -Wall -pipe -O2 -DNDEBUG -o mbconvert convert.o ../../.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/converter'
Making all in hexmodops
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/hexmodops'
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../../tools/hexmodops -I../.. -I../../.. -I../.. -Wall -pipe -O2 -DNDEBUG -MT makeops.o -MD -MP -MF .deps/makeops.Tpo -c -o makeops.o ../../../tools/hexmodops/makeops.cpp
mv -f .deps/makeops.Tpo .deps/makeops.Po
/bin/sh ../../libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o hexmodops makeops.o ../../libMOAB.la -lm
mkdir .libs
c++ -Wall -pipe -O2 -DNDEBUG -o hexmodops makeops.o ../../.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/hexmodops'
Making all in mbperf
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/mbperf'
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I../../../tools/mbperf -I../.. -I../../.. -I../.. -I../../../tools/iMesh -I../../../tools/iMesh/SIDL/mserver -I../iMesh/SIDL/mserver -Wall -pipe -O2 -DNDEBUG -MT mbperf.o -MD -MP -MF .deps/mbperf.Tpo -c -o mbperf.o ../../../tools/mbperf/mbperf.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I../../../tools/mbperf -I../.. -I../../.. -I../.. -I../../../tools/iMesh -I../../../tools/iMesh/SIDL/mserver -I../iMesh/SIDL/mserver -Wall -pipe -O2 -DNDEBUG -MT mbperf_iMesh.o -MD -MP -MF .deps/mbperf_iMesh.Tpo -c -o mbperf_iMesh.o ../../../tools/mbperf/mbperf_iMesh.cpp
mv -f .deps/mbperf_iMesh.Tpo .deps/mbperf_iMesh.Po
/bin/sh ../../libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o mbperf_iMesh mbperf_iMesh.o ../../libMOAB.la ../iMesh/libiMesh.la -lm
mkdir .libs
c++ -Wall -pipe -O2 -DNDEBUG -o mbperf_iMesh mbperf_iMesh.o ../../.libs/libMOAB.a ../iMesh/.libs/libiMesh.a /home/jason/moab/test/dist/moab-3.99/_build/.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
mv -f .deps/mbperf.Tpo .deps/mbperf.Po
/bin/sh ../../libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o mbperf mbperf.o ../../libMOAB.la -lm
c++ -Wall -pipe -O2 -DNDEBUG -o mbperf mbperf.o ../../.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/mbperf'
Making all in size
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/size'
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../../tools/size -I../.. -I../../.. -I../.. -Wall -pipe -O2 -DNDEBUG -MT measure.o -MD -MP -MF .deps/measure.Tpo -c -o measure.o ../../../tools/size/measure.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../../tools/size -I../.. -I../../.. -I../.. -Wall -pipe -O2 -DNDEBUG -MT size.o -MD -MP -MF .deps/size.Tpo -c -o size.o ../../../tools/size/size.cpp
mv -f .deps/measure.Tpo .deps/measure.Po
mv -f .deps/size.Tpo .deps/size.Po
/bin/sh ../../libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o mbsize measure.o size.o ../../libMOAB.la -lm
mkdir .libs
c++ -Wall -pipe -O2 -DNDEBUG -o mbsize measure.o size.o ../../.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/size'
Making all in skin
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/skin'
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../../tools/skin -I../.. -I../../.. -I../.. -Wall -pipe -O2 -DNDEBUG -MT skin.o -MD -MP -MF .deps/skin.Tpo -c -o skin.o ../../../tools/skin/skin.cpp
mv -f .deps/skin.Tpo .deps/skin.Po
/bin/sh ../../libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o mbskin skin.o ../../libMOAB.la -lm
mkdir .libs
c++ -Wall -pipe -O2 -DNDEBUG -o mbskin skin.o ../../.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/skin'
Making all in tagprop
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/tagprop'
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../../tools/tagprop -I../.. -I../../.. -I../.. -Wall -pipe -O2 -DNDEBUG -MT parse.o -MD -MP -MF .deps/parse.Tpo -c -o parse.o ../../../tools/tagprop/parse.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../../tools/tagprop -I../.. -I../../.. -I../.. -Wall -pipe -O2 -DNDEBUG -MT propagate_tags.o -MD -MP -MF .deps/propagate_tags.Tpo -c -o propagate_tags.o ../../../tools/tagprop/propagate_tags.cpp
mv -f .deps/parse.Tpo .deps/parse.Po
mv -f .deps/propagate_tags.Tpo .deps/propagate_tags.Po
/bin/sh ../../libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o mbtagprop parse.o propagate_tags.o ../../libMOAB.la -lm
mkdir .libs
c++ -Wall -pipe -O2 -DNDEBUG -o mbtagprop parse.o propagate_tags.o ../../.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/tagprop'
Making all in spheredecomp
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/spheredecomp'
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../../tools/spheredecomp -I../.. -I../../.. -I../.. -Wall -pipe -O2 -DNDEBUG -MT SphereDecomp.o -MD -MP -MF .deps/SphereDecomp.Tpo -c -o SphereDecomp.o ../../../tools/spheredecomp/SphereDecomp.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../../tools/spheredecomp -I../.. -I../../.. -I../.. -Wall -pipe -O2 -DNDEBUG -MT main.o -MD -MP -MF .deps/main.Tpo -c -o main.o ../../../tools/spheredecomp/main.cpp
mv -f .deps/main.Tpo .deps/main.Po
mv -f .deps/SphereDecomp.Tpo .deps/SphereDecomp.Po
/bin/sh ../../libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o spheredecomp SphereDecomp.o main.o ../../libMOAB.la -lm
mkdir .libs
c++ -Wall -pipe -O2 -DNDEBUG -o spheredecomp SphereDecomp.o main.o ../../.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/spheredecomp'
Making all in surfplot
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/surfplot'
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../../tools/surfplot -I../.. -I../../.. -I../.. -Wall -pipe -O2 -DNDEBUG -MT surfplot.o -MD -MP -MF .deps/surfplot.Tpo -c -o surfplot.o ../../../tools/surfplot/surfplot.cpp
mv -f .deps/surfplot.Tpo .deps/surfplot.Po
/bin/sh ../../libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o mbsurfplot surfplot.o ../../libMOAB.la -lm
mkdir .libs
c++ -Wall -pipe -O2 -DNDEBUG -o mbsurfplot surfplot.o ../../.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/surfplot'
Making all in dagmc
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/dagmc'
/bin/sh ../../libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../../tools/dagmc -I../.. -I../../.. -I../.. -Wall -pipe -O2 -DNDEBUG -MT DagMC.lo -MD -MP -MF .deps/DagMC.Tpo -c -o DagMC.lo ../../../tools/dagmc/DagMC.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../../tools/dagmc -I../.. -I../../.. -I../.. -Wall -pipe -O2 -DNDEBUG -MT DagMC.lo -MD -MP -MF .deps/DagMC.Tpo -c ../../../tools/dagmc/DagMC.cpp -o DagMC.o
mv -f .deps/DagMC.Tpo .deps/DagMC.Plo
/bin/sh ../../libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o libdagmc.la -rpath /home/jason/moab/test/dist/moab-3.99/_inst/lib DagMC.lo -lm
mkdir .libs
ar cru .libs/libdagmc.a DagMC.o
ranlib .libs/libdagmc.a
creating libdagmc.la
(cd .libs && rm -f libdagmc.la && ln -s ../libdagmc.la libdagmc.la)
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/dagmc'
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools'
make[4]: Nothing to be done for `all-am'.
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/tools'
make[3]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/tools'
Making all in doc
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/doc'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/doc'
Making all in doxygen
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/doxygen'
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make[1]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build'
make[1]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build'
Making dvi in mhdf
make[2]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/mhdf'
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make[2]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/mhdf'
Making dvi in .
make[2]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build'
make[2]: Nothing to be done for `dvi-am'.
make[2]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build'
Making dvi in test
make[2]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/test'
Making dvi in dual
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/test/dual'
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Making dvi in h5file
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/test/h5file'
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Making dvi in obb
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/test/obb'
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Making dvi in perf
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/test/perf'
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make[3]: Nothing to be done for `dvi-am'.
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Making dvi in tools
make[2]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools'
Making dvi in iMesh
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/iMesh'
Making dvi in .
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/iMesh'
make[4]: Nothing to be done for `dvi-am'.
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/iMesh'
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Making dvi in converter
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/converter'
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Making dvi in hexmodops
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Making dvi in mbperf
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Making dvi in size
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/size'
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Making dvi in skin
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/skin'
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Making dvi in tagprop
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/tagprop'
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Making dvi in spheredecomp
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/spheredecomp'
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Making dvi in surfplot
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/surfplot'
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Making dvi in dagmc
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/dagmc'
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make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools'
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Making dvi in doc
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Making dvi in doxygen
make[2]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/doxygen'
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Making check in mhdf
make[2]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/mhdf'
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Making check in .
make[2]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build'
make moab_test homxform_test scdseq_test tqdcfr test_adj seq_man_test geom_util_test xform_test obb_test vtk_test adaptive_kd_tree_tests bsp_tree_test file_options_test kd_tree_test var_len_test var_len_test_no_template tag_test mesh_set_test cub_file_test kd_tree_tool kd_tree_time
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build'
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT MBTest.o -MD -MP -MF .deps/MBTest.Tpo -c -o MBTest.o ../MBTest.cpp
gunzip -c ../test/mb_big_test.g.gz > test/mb_big_test.g
gunzip -c ../test/cell1.gen.gz > test/cell1.gen
gunzip -c ../test/cell2.gen.gz > test/cell2.gen
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -DTEST -Wall -pipe -O2 -DNDEBUG -Wall -pipe -O2 -DNDEBUG -MT homxform_test-HomXform.o -MD -MP -MF .deps/homxform_test-HomXform.Tpo -c -o homxform_test-HomXform.o `test -f 'HomXform.cpp' || echo '../'`HomXform.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT scdseq_test.o -MD -MP -MF .deps/scdseq_test.Tpo -c -o scdseq_test.o ../scdseq_test.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -DTEST_TQDCFR -Wall -pipe -O2 -DNDEBUG -Wall -pipe -O2 -DNDEBUG -MT tqdcfr-Tqdcfr.o -MD -MP -MF .deps/tqdcfr-Tqdcfr.Tpo -c -o tqdcfr-Tqdcfr.o `test -f 'Tqdcfr.cpp' || echo '../'`Tqdcfr.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT test_adj.o -MD -MP -MF .deps/test_adj.Tpo -c -o test_adj.o ../test_adj.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT TestTypeSequenceManager.o -MD -MP -MF .deps/TestTypeSequenceManager.Tpo -c -o TestTypeSequenceManager.o ../TestTypeSequenceManager.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT GeomUtilTests.o -MD -MP -MF .deps/GeomUtilTests.Tpo -c -o GeomUtilTests.o ../GeomUtilTests.cpp
mv -f .deps/test_adj.Tpo .deps/test_adj.Po
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -DTEST -Wall -pipe -O2 -DNDEBUG -Wall -pipe -O2 -DNDEBUG -MT xform_test-MBAffineXform.o -MD -MP -MF .deps/xform_test-MBAffineXform.Tpo -c -o xform_test-MBAffineXform.o `test -f 'MBAffineXform.cpp' || echo '../'`MBAffineXform.cpp
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT OBBTest.o -MD -MP -MF .deps/OBBTest.Tpo -c -o OBBTest.o ../OBBTest.cpp
mv -f .deps/homxform_test-HomXform.Tpo .deps/homxform_test-HomXform.Po
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT VtkTest.o -MD -MP -MF .deps/VtkTest.Tpo -c -o VtkTest.o ../VtkTest.cpp
mv -f .deps/TestTypeSequenceManager.Tpo .deps/TestTypeSequenceManager.Po
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT adaptive_kd_tree_tests.o -MD -MP -MF .deps/adaptive_kd_tree_tests.Tpo -c -o adaptive_kd_tree_tests.o ../adaptive_kd_tree_tests.cpp
mv -f .deps/xform_test-MBAffineXform.Tpo .deps/xform_test-MBAffineXform.Po
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT bsp_tree_test.o -MD -MP -MF .deps/bsp_tree_test.Tpo -c -o bsp_tree_test.o ../bsp_tree_test.cpp
mv -f .deps/GeomUtilTests.Tpo .deps/GeomUtilTests.Po
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DTEST -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT file_options_test-FileOptions.o -MD -MP -MF .deps/file_options_test-FileOptions.Tpo -c -o file_options_test-FileOptions.o `test -f 'FileOptions.cpp' || echo '../'`FileOptions.cpp
mv -f .deps/scdseq_test.Tpo .deps/scdseq_test.Po
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT kd_tree_test.o -MD -MP -MF .deps/kd_tree_test.Tpo -c -o kd_tree_test.o ../kd_tree_test.cpp
mv -f .deps/VtkTest.Tpo .deps/VtkTest.Po
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT VarLenTagTest.o -MD -MP -MF .deps/VarLenTagTest.Tpo -c -o VarLenTagTest.o ../VarLenTagTest.cpp
mv -f .deps/kd_tree_test.Tpo .deps/kd_tree_test.Po
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -UTEMPLATE_SPECIALIZATION -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT var_len_test_no_template-VarLenTagTest.o -MD -MP -MF .deps/var_len_test_no_template-VarLenTagTest.Tpo -c -o var_len_test_no_template-VarLenTagTest.o `test -f 'VarLenTagTest.cpp' || echo '../'`VarLenTagTest.cpp
mv -f .deps/VarLenTagTest.Tpo .deps/VarLenTagTest.Po
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT TagTest.o -MD -MP -MF .deps/TagTest.Tpo -c -o TagTest.o ../TagTest.cpp
mv -f .deps/bsp_tree_test.Tpo .deps/bsp_tree_test.Po
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT Test_MBMeshSet.o -MD -MP -MF .deps/Test_MBMeshSet.Tpo -c -o Test_MBMeshSet.o ../Test_MBMeshSet.cpp
mv -f .deps/var_len_test_no_template-VarLenTagTest.Tpo .deps/var_len_test_no_template-VarLenTagTest.Po
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT cub_file_test.o -MD -MP -MF .deps/cub_file_test.Tpo -c -o cub_file_test.o ../cub_file_test.cc
mv -f .deps/file_options_test-FileOptions.Tpo .deps/file_options_test-FileOptions.Po
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT kd_tree_tool.o -MD -MP -MF .deps/kd_tree_tool.Tpo -c -o kd_tree_tool.o ../kd_tree_tool.cpp
mv -f .deps/adaptive_kd_tree_tests.Tpo .deps/adaptive_kd_tree_tests.Po
c++ -DTEMPLATE_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DSRCDIR=.. -Wall -pipe -O2 -DNDEBUG -MT kd_tree_time.o -MD -MP -MF .deps/kd_tree_time.Tpo -c -o kd_tree_time.o ../kd_tree_time.cpp
mv -f .deps/OBBTest.Tpo .deps/OBBTest.Po
/bin/sh ./libtool --tag=CXX --mode=link c++ -DTEST -Wall -pipe -O2 -DNDEBUG -Wall -pipe -O2 -DNDEBUG -lm -o homxform_test homxform_test-HomXform.o ./libMOAB.la -lm
mv -f .deps/kd_tree_time.Tpo .deps/kd_tree_time.Po
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o scdseq_test scdseq_test.o ./libMOAB.la -lm
mv -f .deps/tqdcfr-Tqdcfr.Tpo .deps/tqdcfr-Tqdcfr.Po
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o test_adj test_adj.o ./libMOAB.la -lm
c++ -DTEST -Wall -pipe -O2 -DNDEBUG -Wall -pipe -O2 -DNDEBUG -o homxform_test homxform_test-HomXform.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -Wall -pipe -O2 -DNDEBUG -o test_adj test_adj.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o seq_man_test TestTypeSequenceManager.o ./libMOAB.la -lm
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o geom_util_test GeomUtilTests.o ./libMOAB.la -lm
c++ -Wall -pipe -O2 -DNDEBUG -o scdseq_test scdseq_test.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -Wall -pipe -O2 -DNDEBUG -o seq_man_test TestTypeSequenceManager.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
/bin/sh ./libtool --tag=CXX --mode=link c++ -DTEST -Wall -pipe -O2 -DNDEBUG -Wall -pipe -O2 -DNDEBUG -lm -o xform_test xform_test-MBAffineXform.o ./libMOAB.la -lm
mv -f .deps/kd_tree_tool.Tpo .deps/kd_tree_tool.Po
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o obb_test OBBTest.o ./libMOAB.la -lm
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o vtk_test VtkTest.o ./libMOAB.la -lm
mv -f .deps/MBTest.Tpo .deps/MBTest.Po
mv -f .deps/cub_file_test.Tpo .deps/cub_file_test.Po
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o adaptive_kd_tree_tests adaptive_kd_tree_tests.o ./libMOAB.la -lm
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o bsp_tree_test bsp_tree_test.o ./libMOAB.la -lm
c++ -Wall -pipe -O2 -DNDEBUG -o geom_util_test GeomUtilTests.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o file_options_test file_options_test-FileOptions.o -lm
c++ -Wall -pipe -O2 -DNDEBUG -o obb_test OBBTest.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEST -Wall -pipe -O2 -DNDEBUG -Wall -pipe -O2 -DNDEBUG -o xform_test xform_test-MBAffineXform.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -Wall -pipe -O2 -DNDEBUG -o vtk_test VtkTest.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o kd_tree_test kd_tree_test.o ./libMOAB.la -lm
mv -f .deps/TagTest.Tpo .deps/TagTest.Po
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o var_len_test VarLenTagTest.o -lm
c++ -Wall -pipe -O2 -DNDEBUG -o adaptive_kd_tree_tests adaptive_kd_tree_tests.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o var_len_test_no_template var_len_test_no_template-VarLenTagTest.o -lm
c++ -Wall -pipe -O2 -DNDEBUG -o bsp_tree_test bsp_tree_test.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -Wall -pipe -O2 -DNDEBUG -o kd_tree_test kd_tree_test.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o cub_file_test cub_file_test.o ./libMOAB.la -lm
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o kd_tree_tool kd_tree_tool.o ./libMOAB.la -lm
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o kd_tree_time kd_tree_time.o ./libMOAB.la -lm
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o moab_test MBTest.o ./libMOAB.la -lm
/bin/sh ./libtool --tag=CXX --mode=link c++ -DTEST_TQDCFR -Wall -pipe -O2 -DNDEBUG -Wall -pipe -O2 -DNDEBUG -lm -o tqdcfr tqdcfr-Tqdcfr.o ./libMOAB.la -lm
mv -f .deps/Test_MBMeshSet.Tpo .deps/Test_MBMeshSet.Po
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -O2 -DNDEBUG -lm -o mesh_set_test Test_MBMeshSet.o ./libMOAB.la -lm
c++ -Wall -pipe -O2 -DNDEBUG -o tag_test TagTest.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -Wall -pipe -O2 -DNDEBUG -o kd_tree_tool kd_tree_tool.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -Wall -pipe -O2 -DNDEBUG -o kd_tree_time kd_tree_time.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -Wall -pipe -O2 -DNDEBUG -o moab_test MBTest.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -Wall -pipe -O2 -DNDEBUG -o cub_file_test cub_file_test.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEST_TQDCFR -Wall -pipe -O2 -DNDEBUG -Wall -pipe -O2 -DNDEBUG -o tqdcfr tqdcfr-Tqdcfr.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -Wall -pipe -O2 -DNDEBUG -o mesh_set_test Test_MBMeshSet.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
make[3]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build'
make check-TESTS
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build'
Size of mConnMap = 9648
Size of mUpConnMap = 59904
Size of MBCN = 1
MB TEST PROGRAM:
mb_adjacent_vertex_test: Success
mb_adjacencies_test: Success
mb_vertex_coordinate_test: Success
mb_vertex_tag_test: Success
mb_bar_connectivity_test: Success
mb_tri_connectivity_test: Success
mb_quad_connectivity_test: Success
mb_tet_connectivity_test: Success
mb_temporary_test: Success
mb_hex_connectivity_test: Success
mb_mesh_sets_set_test: Success
mb_mesh_sets_list_test: Success
mb_mesh_set_parent_child_test: Success
mb_tags_test: Success
mb_dense_tag_test: Success
mb_sparse_tag_test: Success
mb_write_mesh_test: Success
mb_delete_mesh_test: Success
mb_meshset_tracking_test: Success
mb_higher_order_test: Success
mb_bit_tags_test: Success
mb_entity_conversion_test: Success
mb_forced_adjacencies_test: Success
mb_canon_number_test: Success
mb_poly_test: Success
mb_range_test: Success
mb_topo_util_test: Success
mb_split_test: Success
mb_range_seq_intersect_test: Success
mb_poly_adjacency_test: Success
mb_memory_use_test: Success
mb_merge_test: ---Starting Merge Tests---
---Testing:"test/cell1.gen"---
Loaded test/cell1.gen
---Testing:"test/cell2.gen"---
Loaded test/cell2.gen
num hexes = 28
fl = 68 rl = 0
nodes.size() = 72
---Success---
coin_nodes.size() = 13
TIME: 1222.98 seconds.
Success
mb_stress_test: Beginning Stress Test . . .
Reading elements
Read 256000 entities in 0.11 seconds
at 2.32727e+06 elements per second.
Transforming and copying elements
Transformed and created 256000 entities in 0.28 seconds
Creating meshset
Created meshset with 512000 entities in 0 seconds
Writing 512K element file . . .
Wrote file with 512000 entities in 1.03 seconds
Total time: 1.42 seconds.
Success
MB TEST SUMMARY:
Number Tests: 33
Number Successful: 33
Number Failed: 0
PASS: moab_test
All tests passed.
PASS: homxform_test
All tests passed.
PASS: scdseq_test
Usage: tqdcfr <cub_file_name>
Success.
Success.
PASS: tqdcfr
PASS: test_adj
Running test_basic ...
Running test_lower_bound ...
Running test_upper_bound ...
Running test_find ...
Running test_get_entities ...
Running test_insert_sequence_merge ...
Running test_insert_sequence_nomerge ...
Running test_remove_sequence ...
Running test_replace_subsequence ...
Running test_erase ...
Running test_find_free_handle ...
Running test_find_free_sequence ...
Running test_is_free_sequence ...
Running regression_svn1952 ...
Running regression_svn1958 ...
Running regression_svn1960 ...
ALL TESTS PASSED
PASS: seq_man_test
Running test_box_plane_overlap ...
Running test_box_linear_elem_overlap_tri ...
Running test_box_linear_elem_overlap_tet ...
Running test_box_linear_elem_overlap_hex ...
Running test_box_tri_overlap ...
Running test_box_tet_overlap ...
Running test_box_hex_overlap ...
Running test_ray_tri_intersect ...
Running test_closest_location_on_tri ...
Running test_closest_location_on_polygon ...
Running test_segment_box_intersect ...
Running test_closest_location_on_box ...
PASS: geom_util_test
PASS: xform_test
PASS: obb_test
Testing edge2...
Testing edge3...
Testing tri3...
Testing tri6...
Testing quad4...
Testing quad8...
Testing polygon...
Testing tet4...
Testing tet10...
Testing hex8...
Testing hex20...
Testing wedge...
Testing pyramid...
Testing structured_points_2d...
Testing structured_grid_2d...
Testing rectilinear_grid_2d...
Testing structured_points_3d...
Testing structured_grid_3d...
Testing rectilinear_grid_3d...
Testing scalar_attrib_1_bit...
Testing scalar_attrib_1_uchar...
Testing scalar_attrib_1_char...
Testing scalar_attrib_1_ushort...
Testing scalar_attrib_1_short...
Testing scalar_attrib_1_uint...
Testing scalar_attrib_1_int...
Testing scalar_attrib_1_ulong...
Testing scalar_attrib_1_long...
Testing scalar_attrib_1_float...
Testing scalar_attrib_1_double...
Testing scalar_attrib_4_bit...
Testing scalar_attrib_4_uchar...
Testing scalar_attrib_4_char...
Testing scalar_attrib_4_ushort...
Testing scalar_attrib_4_short...
Testing scalar_attrib_4_uint...
Testing scalar_attrib_4_int...
Testing scalar_attrib_4_ulong...
Testing scalar_attrib_4_long...
Testing scalar_attrib_4_float...
Testing scalar_attrib_4_double...
Testing vector_attrib_bit...
Testing vector_attrib_uchar...
Testing vector_attrib_char...
Testing vector_attrib_ushort...
Testing vector_attrib_short...
Testing vector_attrib_uint...
Testing vector_attrib_int...
Testing vector_attrib_ulong...
Testing vector_attrib_long...
Testing vector_attrib_float...
Testing vector_attrib_double...
Testing tensor_attrib_uchar...
Testing tensor_attrib_char...
Testing tensor_attrib_ushort...
Testing tensor_attrib_short...
Testing tensor_attrib_uint...
Testing tensor_attrib_int...
Testing tensor_attrib_ulong...
Testing tensor_attrib_long...
Testing tensor_attrib_float...
Testing tensor_attrib_double...
Testing subset...
63 tests passed
PASS: vtk_test
PASS: adaptive_kd_tree_tests
Running test_iterator ...
Running test_box_iterator ...
Running test_tree_create ...
Running test_box_tree_create ...
Running test_leaf_containing_point_bounded_tree ...
Running test_leaf_containing_point_unbounded_tree ...
Running test_merge_leaf ...
PASS: bsp_tree_test
PASS: file_options_test
PASS: kd_tree_test
Running test_valid_struct ...
Running test_inline ...
Running test_non_inline ...
Running test_resize_ii ...
Running test_resize_in ...
Running test_resize_ni ...
Running test_resize_nn ...
PASS: var_len_test
Running test_valid_struct ...
Running test_inline ...
Running test_non_inline ...
Running test_resize_ii ...
Running test_resize_in ...
Running test_resize_ni ...
Running test_resize_nn ...
PASS: var_len_test_no_template
Running test_create_tag ...
Running test_invalid_tag_size ...
Running test_get_set_sparse_int ...
Running test_get_set_dense_int ...
Running test_get_set_dense_double ...
Running test_get_set_bit ...
Running test_get_by_tag ...
Running test_get_by_tag_value ...
Running test_mesh_value ...
Running test_get_pointers_sparse ...
Running test_get_pointers_dense ...
Running test_set_pointers_sparse ...
Running test_set_pointers_dense ...
Running test_get_entity_tags ...
Running test_delete_sparse_tag ...
Running test_delete_dense_tag ...
Running test_delete_mesh_tag ...
Running test_delete_sparse_data ...
Running test_delete_dense_data ...
Running test_delete_bit_data ...
Running test_create_variable_length_tag ...
Running test_get_set_variable_length_sparse ...
Running test_get_set_variable_length_dense ...
Running test_get_set_variable_length_mesh ...
Running regression_one_entity_by_var_tag ...
Running regression_tag_on_nonexistent_entity ...
PASS: tag_test
Running test_add_entities_ordered ...
Running test_add_entities_set ...
Running test_add_entities_ordered_tracking ...
Running test_add_entities_set_tracking ...
Running test_remove_entities_ordered ...
Running test_remove_entities_set ...
Running test_remove_entities_ordered_tracking ...
Running test_remove_entities_set_tracking ...
Running test_entities_by_type_ordered ...
Running test_entities_by_type_set ...
Running test_entities_by_dim_ordered ...
Running test_entities_by_dim_set ...
Running test_subtract_set_set ...
Running test_subtract_set_ordered ...
Running test_subtract_ordered_set ...
Running test_subtract_ordered_ordered ...
Running test_subtract_set_set_tracking ...
Running test_subtract_set_ordered_tracking ...
Running test_subtract_ordered_set_tracking ...
Running test_subtract_ordered_ordered_tracking ...
Running test_itersect_set_set ...
Running test_itersect_set_ordered ...
Running test_itersect_ordered_set ...
Running test_itersect_ordered_ordered ...
Running test_itersect_set_set_tracking ...
Running test_itersect_set_ordered_tracking ...
Running test_itersect_ordered_set_tracking ...
Running test_itersect_ordered_ordered_tracking ...
Running test_unite_set_set ...
Running test_unite_set_ordered ...
Running test_unite_ordered_set ...
Running test_unite_ordered_ordered ...
Running test_unite_set_set_tracking ...
Running test_unite_set_ordered_tracking ...
Running test_unite_ordered_set_tracking ...
Running test_unite_ordered_ordered_tracking ...
Running test_contains_entities_ordered ...
Running test_contains_entities_set ...
Running test_clear_ordered ...
Running test_clear_set ...
Running test_clear_ordered_tracking ...
Running test_clear_set_tracking ...
ALL TESTS PASSED
PASS: mesh_set_test
Running test_vertices ...
MBErrorCode Test Failed: MB_SUCCESS == rval
at line 128 of '../cub_file_test.cc'
Expected value: Success (0)
Actual value: Failure (13)
test_vertices: FAILED
Running test_edges ...
MBErrorCode Test Failed: MB_SUCCESS == rval
at line 128 of '../cub_file_test.cc'
Expected value: Success (0)
Actual value: Failure (13)
test_edges: FAILED
Running test_quads ...
MBErrorCode Test Failed: MB_SUCCESS == rval
at line 128 of '../cub_file_test.cc'
Expected value: Success (0)
Actual value: Failure (13)
test_quads: FAILED
Running test_hexes ...
MBErrorCode Test Failed: MB_SUCCESS == rval
at line 128 of '../cub_file_test.cc'
Expected value: Success (0)
Actual value: Failure (13)
test_hexes: FAILED
Running test_geometric_topology ...
MBErrorCode Test Failed: MB_SUCCESS == rval
at line 128 of '../cub_file_test.cc'
Expected value: Success (0)
Actual value: Failure (13)
test_geometric_topology: FAILED
Running test_geometric_sets ...
MBErrorCode Test Failed: MB_SUCCESS == rval
at line 128 of '../cub_file_test.cc'
Expected value: Success (0)
Actual value: Failure (13)
test_geometric_sets: FAILED
Running test_blocks ...
MBErrorCode Test Failed: MB_SUCCESS == rval
at line 128 of '../cub_file_test.cc'
Expected value: Success (0)
Actual value: Failure (13)
test_blocks: FAILED
Running test_side_sets ...
MBErrorCode Test Failed: MB_SUCCESS == rval
at line 128 of '../cub_file_test.cc'
Expected value: Success (0)
Actual value: Failure (13)
test_side_sets: FAILED
Running test_node_sets ...
MBErrorCode Test Failed: MB_SUCCESS == rval
at line 128 of '../cub_file_test.cc'
Expected value: Success (0)
Actual value: Failure (13)
test_node_sets: FAILED
Running test_file_set ...
MBErrorCode Test Failed: MB_SUCCESS == rval
at line 128 of '../cub_file_test.cc'
Expected value: Success (0)
Actual value: Failure (13)
test_file_set: FAILED
FAIL: cub_file_test
====================
1 of 19 tests failed
====================
make[3]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build'
make[2]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build'
make[1]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build'
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