[MOAB-dev] running pcomm_unit

[de Almeida, Valmor F.]

When you have time....


I did this:

->mpirun -n 4 mbparallelcomm_test 0 3 test/h5file/ptest.cub

Because I could not find the partest.cub file. These are the cub files
(moab rev. 1902) I have

./test/brick_cubit10.cub
./test/h5file/ptest.cub
./test/brick_cubit10.1.cub
./test/brick_cubit10.2.cub

The result follows below. It seems the read is fine but the processor
boundaries have problems.

Also, when I build moab I do a make check which, for the most part,
passes the tests. (there are some HDF5-DIAG: Error detected in HDF5
(1.8.1) thread 0: .....; I can send you the output if you like to see
it.) 

Thanks,

--
Valmor

++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
->mpirun -n 4 mbparallelcomm_test 0 3 test/h5file/ptest.cub 
Reading file test/h5file/ptest.cub
Broadcasting mesh.
Broadcasting mesh.
Broadcasting mesh.
Checking global ids.
Getting fileset entities.
Broadcasting mesh.
Bcast done; entities:

Number of entities per type: 
Vertex: 153
Bcast done; entities:

Number of entities per type: 
Vertex: 153
Edge: 300
Tri: 0
Quad: 164
Polygon: 0
Tet: 0
Pyramid: 0
Prism: 0
Knife: 0
Hex: 64
Polyhedron: 0
EntitySet: 164

Getting fileset entities.
Deleting nonlocal entities.
My partition sets:      EntitySet 67109020
Bcast done; entities:
Number of entities per type: 

Vertex: 153
Edge: 300
Tri: 0
Quad: 164
Polygon: 0
Tet: 0
Pyramid: 0
Prism: 0
Knife: 0
Hex: 64
Polyhedron: 0
        EntitySet 67109024
EntitySet: 164

Getting fileset entities.
Deleting nonlocal entities.
        EntitySet 134217885
        EntitySet 134217889
Gathering related entities.

Number of entities per type: 
Vertex: 153
Edge: 300
Tri: 0
Quad: 164
Polygon: 0
Tet: 0
Bcast done; entities:
        EntitySet 67109028
My partition sets: Pyramid: 0
Prism: 0
Knife: 0
Hex: 64
Polyhedron: 0
EntitySet: 164

Getting fileset entities.
Deleting nonlocal entities.
        EntitySet 201326750
        EntitySet 201326754
Gathering related entities.
Edge: 300
My partition sets: Gathering related entities.
Tri: 0
Quad: 164
Polygon: 0
Tet: 0
Pyramid: 0
Prism: 0
Knife: 0
Hex: 64
Polyhedron: 0
EntitySet: 164

Deleting nonlocal entities.
My partition sets:      EntitySet 155
        EntitySet 159
        EntitySet 163
Gathering related entities.
Removing deletable entities from keepable sets.
Deleting deletable entities.
Exchanging ghost entities.
Couldn't read mesh; error message:
Removing deletable entities from keepable sets.
Deleting deletable entities.
Failed in step PARALLEL EXCHANGE_GHOSTS

Failed to find iface tag.
Failed to get iface sets, procs

Exchanging ghost entities.
Couldn't read mesh; error message:
Failed in step PARALLEL EXCHANGE_GHOSTS

Failed to find iface tag.
Failed to get iface sets, procs

Removing deletable entities from keepable sets.
Deleting deletable entities.
Exchanging ghost entities.
Couldn't read mesh; error message:
Failed in step PARALLEL EXCHANGE_GHOSTS

Failed to find iface tag.
Failed to get iface sets, procs

Removing deletable entities from keepable sets.
Deleting deletable entities.
Exchanging ghost entities.
Couldn't read mesh; error message:
Failed in step PARALLEL EXCHANGE_GHOSTS

Failed to find iface tag.
Failed to get iface sets, procs

Proc 1: Success.
Proc 2: Success.
Proc 3: Success.
Proc 0: Success.
Times: 0.0525429 0.0525398 -1.21373e+09 3.86615e-39 1.21373e+09
(total/read/shared/report/delete)

> -----Original Message-----
> From: Tim Tautges [mailto:tautges at mcs.anl.gov]
> Sent: Tuesday, June 17, 2008 10:56 AM
> To: de Almeida, Valmor F.; moab-dev at mcs.anl.gov
> Subject: Re: [MOAB-dev] running pcomm_unit
> 
> You shouldn't be getting these results.  Right now I'm working on a
> deadline that'll be challenging, but I'll try to check this out.  One
> thing you can try to verify parallel functionality is build & run
> mbparallelcomm_test, in the main source directory:
> 
> make mbparallelcomm_test
> 
> mpirun -n 4 mbparallelcomm_test 0 3 test/partest.cub
> 
> That will pick up test/partest.cub, use the MATERIAL_SET entity sets
as
> the decomposition, read and distribute the mesh, delete the non-owned
> mesh, and establish shared interfaces.  I'm pretty sure this doesn't
> work at the moment because of a commit I did last week though.
> 
> - tim
>