[hpc-announce] CFP: Research Topic on Scalable Bioinformatics: Methods, Software Tools, and Hardware Architectures

[n.alachiotis at utwente.nl]

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                                                                   CALL FOR PAPERS
                                                                  Frontiers in Genetics
Research Topic on Scalable Bioinformatics: Methods, Software Tools, and Hardware Architectures
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Guest Editors:
Dr. Nikolaos Alachiotis (University of Twente)
Dr. Tze Meng Low (Carnegie Mellon University)
Dr. Pavlos Pavlidis (Foundation for Research and Technology - Hellas)

The field of Bioinformatics is dominated by resource-demanding kernels.
This has attracted the attention of the computer engineering community to
such a great extent that the well-known Smith-Waterman pairwise sequence
alignment algorithm frequently serves as one of the test applications to
demonstrate new engineering concepts in accelerator platforms. Yet, most
performance-driven innovations for Bioinformatics problems frequently
remain at the basic-research level.

This Research Topic aspires to connect computational problems in the
fields of Bioinformatics and Computational Biology with software and
hardware solutions from the fields of Computer Science and Computer
Engineering. It is now open to receive submissions of both Original
Research and Review articles that address existing challenges and
present solutions.

Computational life sciences areas of interest include (but are not limited to):

-   Sequence alignment
-   Phylogenetics
-   Population Genetics
-   Omics tools and databases
-   Microbes and microbiomes
-   Computational Epidemiology
-   Computational Neuroscience

Computer science and engineering areas of interest include (but are not limited to):

-   Parallel and distributed algorithms
-   Data-aware and out-of-core techniques
-   Parallel computer architectures (multicore, manycore, GPU, FPGA, SoC)

Submission Deadline: October 16, 2020

URL: https://www.frontiersin.org/research-topics/13815/scalable-bioinformatics-methods-software-tools-and-hardware-architectures