[ExM Users] create directory based on loop index

[Ketan Maheshwari]

I think I found a command line switch of the application that can uniquely
identify the output.


On Wed, Jul 30, 2014 at 10:39 AM, Wozniak, Justin M. <wozniak at mcs.anl.gov>
wrote:

>
> You will need to do this kind of thing in the task.
>
>
> On 07/30/2014 10:34 AM, Ketan Maheshwari wrote:
>
> Thanks, create-dir has worked. I think I need a bit more than this: Is it
> possible to cd into this newly created dir and run the app. This is needed
> because the Rosetta invocation does not have a way to distinguish some of
> the outputs and will result in overwrites. The code is as follows:
>
>  foreach pdb in PDB{
>     foreach i in [0:9]{
>     create_dir("dir"+fromint(i)) => leaf_main(["-database", "...",
> "..."]); //need to perform this operation inside diri
>   }
>  }
>
>  Thanks,
> Ketan
>
>
> On Wed, Jul 30, 2014 at 10:04 AM, Tim Armstrong <tim.g.armstrong at gmail.com
> > wrote:
>
>>  You'll also need to convert the loop index to a string with fromint(i)
>> or sprintf("%i", i) or similar.
>>
>>  It's probably better and less error-prone in general to ensure that any
>> functions that create their output files also create the directory.  App
>> functions should already do this (if they don't, it's a bug).
>>
>>   - Tim
>>
>>
>>  On Wed, Jul 30, 2014 at 9:52 AM, Justin M Wozniak <wozniak at mcs.anl.gov>
>> wrote:
>>
>>>
>>> Yes but do it like this:
>>>
>>>  foreach i in [0:99]{
>>>      create_dir("dir"+i) =>
>>>         do_some_op(inargs, "dir"+i+"/"+outfile);
>>> }
>>>
>>>
>>>
>>>   On 07/30/2014 09:50 AM, Ketan Maheshwari wrote:
>>>
>>>   In T, is it possible to create directory on the fly within a foreach
>>> loop like so:
>>>
>>>  foreach i in [0:99]{
>>>     create_dir("dir"+i);
>>>     do_some_op(inargs, "dir"+i+"/"+outfile);
>>> }
>>>
>>>  Thanks,
>>> Ketan
>>>
>>>
>>>    _______________________________________________
>>> ExM-user mailing listExM-user at lists.mcs.anl.govhttps://lists.mcs.anl.gov/mailman/listinfo/exm-user
>>>
>>>
>>>
>>> --
>>> Justin M Wozniak
>>>
>>>
>>> _______________________________________________
>>> ExM-user mailing list
>>> ExM-user at lists.mcs.anl.gov
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>>>
>>>
>>
>
>
> --
> Justin M Wozniak
>
>
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