[Darshan-users] Using darshan to characterize PHDF characteristics
mahzadkhoshlessan at gmail.com
Mon Jan 21 20:17:45 CST 2019
Yes, darshan-job-summary.pl and darshan-parser work fine.
Sure, I have attached my logfile.
Thanks for the help.
Arizona State University
Center for Biological Physics and Department of Physics
On Fri, Jan 18, 2019 at 7:55 AM Carns, Philip H. via Darshan-users <
darshan-users at lists.mcs.anl.gov> wrote:
> Hi Mahzad,
> Everything you are doing looks fine to me. It's possible that we have a
> bug that is being triggered in darshan-convert (this is a command line
> utility called within darshan-summary-per-file.sh to help split up the
> Are you able to run darshan-job-summary.pl and/or darshan-parser on the
> log file?
> Can you share your log file for us to have a look at it and see if we can
> On 2019-01-15 19:54:20-05:00 Darshan-users wrote:
> Hello all,
> I have a python code and I am using parallel hdf5 through h5py.
> I compiled darshan with the following options:
> ./configure --prefix=/home/mkhoshle/installs/darshan --with-mem- align=8
> --with-jobid-env=PBS_JOBID --enable-HDF5-post-1.10 CC=mpicc
> I set the the environment variable LD_PRELOAD as:
> export LD_PRELOAD=
> And I am using Darshan 3.1.5.
> I can run my code with no error but when I run darshan-summary-per-file.sh
> I get the following error and I get no output.
> Status: Generating summary for file 1 of 64: __init__.py
> /home/mkhoshle/installs/darshan/bin/darshan-summary-per-file.sh: line 63:
> 27764 Segmentation fault darshan-convert --file $hash $1 $2/$file.darshan
> darshan-summary-per-file.sh done. Results can be found in
> Am I doing anything wrong?
> Darshan-users mailing list
> Darshan-users at lists.mcs.anl.gov
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