[Swift-commit] r3064 - SwiftApps/SIDGrid/swift/projects/andric/peakfit_pilots/PK2/wholebrain

[noreply at svn.ci.uchicago.edu]

Author: andric
Date: 2009-08-06 10:54:50 -0500 (Thu, 06 Aug 2009)
New Revision: 3064

Modified:
   SwiftApps/SIDGrid/swift/projects/andric/peakfit_pilots/PK2/wholebrain/PK2mediator.swift
Log:
dropped using batch arguments

Modified: SwiftApps/SIDGrid/swift/projects/andric/peakfit_pilots/PK2/wholebrain/PK2mediator.swift
===================================================================
--- SwiftApps/SIDGrid/swift/projects/andric/peakfit_pilots/PK2/wholebrain/PK2mediator.swift	2009-08-06 15:53:34 UTC (rev 3063)
+++ SwiftApps/SIDGrid/swift/projects/andric/peakfit_pilots/PK2/wholebrain/PK2mediator.swift	2009-08-06 15:54:50 UTC (rev 3064)
@@ -27,7 +27,7 @@
     PeakResult outObj<simple_mapper; location="results", prefix=@strcat(subject,"_",h,"vert",vert,".out.")>;
     file q_result<single_file_mapper; file=@strcat("Qresults/",subject,"_",h,"vert",vert,".qresult")>;
     string med_args = @strcat("--user ","andric"," --conf ", @filename(config)," --db ", db," --host ", host,
-        " --begin_vox ", vert," --end_vox ", evox," --batchstep ", "1"," --subject ", subject,
+        " --subject ", subject,
         " --query ", query_outline," --r_swift_args ", @filename(outObj)," --outprefix ", theoutprefix);
     trace(med_args);
     (q_result, outObj) = run_query(med_args, config, code);
@@ -44,8 +44,8 @@
 
 ## variables to move across in the foreach loops:
 string declarelist[] = ["PK2smth"];
-string hemilist[] = ["rh"];
-int vertices[] = [1:2:1];
+string hemilist[] = ["lh"];
+int vertices[] = [3:4:1];
 
 ## nest the loop_query process in foreach loops to move across variable sets
 foreach subject in declarelist{