sieve-dev error configure in petsc-dev

Shi Jin jinzishuai at gmail.com
Mon Dec 1 21:52:42 CST 2008


Hi there,

I recently updated my petsc-dev and tried the same configuration I did
before:
PETSC_DIR=`pwd` config/configure.py Configure options: --with-cc=gcc
--with-fc=g77 --with-cxx=g++ --with-clanguage=cxx --with-sieve=1
--with-opt-sieve=1
--with-blas-lapack-dir=/home/seki/UofA/petsc-dev-externalpackages/fblaslapack-3.1.1
--with-boost-dir=/home/seki/UofA/petsc-dev-externalpackages/Boost
--with-chaco-dir=/home/seki/UofA/petsc-dev-externalpackages/Chaco-2.2
--with-mpi-dir=/usr/local --with-shared=0
--with-fiat-dir=/home/seki/UofA/petsc-dev-externalpackages/fiat-dev
--with-generator-dir=/home/seki/UofA/petsc-dev-externalpackages/Generator

But it crashed. I have attached the configure.log and hope you can help me
fix it. The error I got was

'Configure' object has no attribute 'toStringNoDupes'  File
"config/configure.py", line 173, in petsc_configure
    framework.configure(out = sys.stdout)
  File
"/mnt/UofA/sekidata/petsc-dev-I/config/BuildSystem/config/framework.py",
line 883, in configure
    child.configure()
  File "/mnt/UofA/sekidata/petsc-dev-I/config/PETSc/Configure.py", line 401,
in configure
    self.Dump()
  File "/mnt/UofA/sekidata/petsc-dev-I/config/PETSc/Configure.py", line 120,
in Dump

self.addMakeMacro('PCC_LINKER_FLAGS',self.libraries.toStringNoDupes(self.setCompilers.getLinkerFlags().split('
')))


Is there something wrong with my linker? I recently upgraded my ubuntu box
to 8.0.4.
Thank you very much.

Shi

PS. I has made quite some progress on my code using petsc-dev. A movie of
the DNS of 10,000 particles separating in fluid can be found at
http://www.ualberta.ca/~sjin1/gallery/PartciculateFlow/10kSepRe1Step3k.aviif
you are interested.
The simulation will not be possible without the excellent job petsc-dev
does. Thank you very much.
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