[petsc-users] configuration on hopper at nersc

Satish Balay balay at mcs.anl.gov
Tue Jul 2 11:18:12 CDT 2013


Configure Options: --configModules=PETSc.Configure --optionsModule=PETSc.compilerOptions --with-debugging=0 --with-cc=/opt/cray/xt-asyncpe/5.19/bin/cc --with-fc=/opt/cray/xt-asyncpe/5.19/bin/ftn --with-mpiexec=aprun --download-metis=1 --download-parmetis=1 --with-clib-autodetect=0 --with-cxxlib-autodetect=0 --with-fortranlib-autodetect=0 --prefix=/global/homes/g/gpau/tough_codes/esd-tough3/build/Linux-x86_64-MPI-eco2n-Release/toughlib


Can you use the additional option --with-cxx=0 ?
[or perhaps --with-cxx=/opt/cray/xt-asyncpe/5.19/bin/CC]

Satish

On Mon, 1 Jul 2013, George Pau wrote:

> As usual, I forgot the attachments.  George
> 
> 
> On Mon, Jul 1, 2013 at 5:05 PM, George Pau <gpau at lbl.gov> wrote:
> 
> > I was having trouble configuring petsc 3.4.1 on hopper.  The same
> > configuration that use for 3.3.6 failed due to "Mismatched single quotes in
> > C library string".  Attached (configure_without_additional_flag.log) is the
> > result of the configuration script.
> >
> > I read in a previous thread (
> > http://lists.mcs.anl.gov/pipermail/petsc-users/2011-July/009310.html)
> > that I need to add  --with-clib-autodetect=0 --with-cxxlib-autodetect=0
> > --with-fortranlib-autodetect=0 for that error.  But it failed later with
> > the following error: "C++ error! mpi.h could not be located at: []".
> >  configure_with_additional_flag.log is the result of the configuration
> > script.
> >
> > I am using the gnu compiler and it is of version 4.1.40, if that is
> > relevant.  Please let me know if you need other configuration information.
> >
> > Thanks,
> > George
> >
> >
> > --
> > George Pau
> > Earth Sciences Division
> > Lawrence Berkeley National Laboratory
> > One Cyclotron, MS 74-120
> > Berkeley, CA 94720
> >
> > (510) 486-7196
> > gpau at lbl.gov
> > http://esd.lbl.gov/about/staff/georgepau/
> >
> 
> 
> 
> 



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