[petsc-dev] HDF5 Viewer for Fortran 90

[Satish Balay]

I pused the fix in the branch balay/hdf5-ftnbinding. But since this is
off 'maint/3.4' - you can do the following to use it with petsc-dev.

# checkout origin/master in detached mode - so that it can be discarded later
git fetch origin
git checkout origin/master
git merge origin/balay/hdf5-ftnbinding
make allfortranstubs
make

Let us know if it works.

thanks,
Satish

 On Thu, 30 May 2013, Satish Balay wrote:

> On Thu, 30 May 2013, Satish Balay wrote:
> 
> > Looks like we need custom bindings for
> > PetscErrorCode  PetscViewerHDF5PushGroup(PetscViewer viewer, const char *name)
> > PetscErrorCode  PetscViewerHDF5GetGroup(PetscViewer viewer, const char **name)
> > 
> > Will take a look.
> > 
> > Fortran bindings don't make sense for these two?
> > PetscErrorCode  PetscViewerHDF5Open(MPI_Comm comm, const char name[], PetscFileMode type, PetscViewer *hdf5v)
> I see we already have a  custom binding for this one
> 
> Satish
> 
> > PetscErrorCode  PetscViewerHDF5GetFileId(PetscViewer viewer, hid_t *file_id)
> > 
> > Satish
> > 
> > On Wed, 29 May 2013, Barry Smith wrote:
> > 
> > > 
> > >    Satish,
> > > 
> > >      Please branch off of maint and get them all into the next patch (as well as master) if Jed hasn't done this.
> > > 
> > >    Barry
> > > 
> > > On May 29, 2013, at 3:29 PM, Jed Brown <jedbrown at mcs.anl.gov> wrote:
> > > 
> > > > Chris Eldred <chris.eldred at gmail.com> writes:
> > > > 
> > > >> I am having issues getting the HDF5 Viewer to work with Fortran 90.
> > > >> Specifically, I get the following types of errors when attempting to link
> > > >> my executable together:
> > > >> 
> > > >> /home/user/Dropbox/NTM/SIEVETEST/OPERATOR/src/output.f90:664: undefined
> > > >> reference to `petscviewerhdf5settimestep_'
> > > >> /home/user/Dropbox/NTM/SIEVETEST/OPERATOR/src/output.f90:668: undefined
> > > >> reference to `petscviewerhdf5pushgroup_'
> > > >> /home/user/Dropbox/NTM/SIEVETEST/OPERATOR/src/output.f90:675: undefined
> > > >> reference to `petscviewerhdf5popgroup_'
> > > >> 
> > > >> It seems like the Fortran interfaces for the HDF5-specific viewer functions
> > > >> are not present (there are no issues with the other viewer functions).
> > > > 
> > > > Yes, PetscViewerHDF5PushGroup() needs a custom binding.  The others can
> > > > be auto-generated.
> > > 
> > > 
> > 
> > 
> 
>