[petsc-dev] Huh?

Jed Brown jedbrown at mcs.anl.gov
Tue Feb 5 22:34:41 CST 2013


Valgrind-clean here as of
https://bitbucket.org/petsc/petsc-dev/commits/4e55cead1b3e383fa57e9479d00c8f2dd75b4874.
I haven't tested more recently, but don't see anything that looks obviously
bad. Which mpich version do you have?


On Tue, Feb 5, 2013 at 10:20 PM, Barry Smith <bsmith at mcs.anl.gov> wrote:

>
>   Anybody mucking things up?
>
>    Barry
>
> error: No such file or directory - old dSYM file cannot be overwritten:
>       old:
> '/Users/barrysmith/Src/petsc-dev/arch-opt/lib/libmpl.1.dylib.dSYM/Contents/Resources/DWARF/libmpl.1.dylib'
>
> new:'/Users/barrysmith/Src/petsc-dev/arch-opt/lib/libmpl.1.dylib.dSYM/Contents/Resources/DWARF/libmpl.1.dylib.x86_64'.
> ==10247== Invalid read of size 8
> ==10248== Invalid read of size 8
> ==10247==    at 0x111D08B: MPIDI_CH3U_Recvq_FDU_or_AEP (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libmpich.8.dylib)
> ==10247==    by 0x1127B9E: MPID_Irecv (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libmpich.8.dylib)
> ==10247==    by 0x10ACB94: MPI_Irecv (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libpmpich.8.dylib)
> ==10248==    at 0x111D08B: MPIDI_CH3U_Recvq_FDU_or_AEP (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libmpich.8.dylib)
> ==10248==    by 0x1127B9E: MPID_Irecv (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libmpich.8.dylib)
> ==10248==    by 0x10ACB94: MPI_Irecv (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libpmpich.8.dylib)
> ==10248==    by 0x11D35E: VecScatterCreate_PtoS (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libpetsc.dylib)
> ==10247==    by 0x11D35E: VecScatterCreate_PtoS (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libpetsc.dylib)
> ==10247==    by 0x106AE8: VecScatterCreate (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libpetsc.dylib)
> ==10247==    by 0x3C7449: DMSetUp_DA_2D (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libpetsc.dylib)
> ==10248==    by 0x106AE8: VecScatterCreate (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libpetsc.dylib)
> ==10248==    by 0x3C7449: DMSetUp_DA_2D (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libpetsc.dylib)
> ==10248==    by 0x3F4122: DMSetUp_DA (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libpetsc.dylib)
> ==10247==    by 0x3F4122: DMSetUp_DA (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libpetsc.dylib)
> ==10247==    by 0x45DC09: DMSetUp (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libpetsc.dylib)
> ==10248==    by 0x45DC09: DMSetUp (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libpetsc.dylib)
> ==10248==    by 0x3C8556: DMDACreate2d (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libpetsc.dylib)
> ==10247==    by 0x3C8556: DMDACreate2d (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libpetsc.dylib)
> ==10247==    by 0x10000150A: main (in ./ex19)
> ==10247==  Address 0x10002af60 is 16 bytes after a block of size 32 alloc'd
> ==10248==    by 0x10000150A: main (in ./ex19)
> ==10248==  Address 0x10002af60 is 16 bytes after a block of size 32 alloc'd
> ==10247==    at 0xC713: malloc (vg_replace_malloc.c:274)
> ==10247==    by 0x112A916: MPID_VCRT_Create (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libmpich.8.dylib)
> ==10248==    at 0xC713: malloc (vg_replace_malloc.c:274)
> ==10248==    by 0x112A916: MPID_VCRT_Create (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libmpich.8.dylib)
> ==10247==    by 0x112770C: MPID_Init (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libmpich.8.dylib)
> ==10247==    by 0x1177703: MPIR_Init_thread (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libmpich.8.dylib)
> ==10247==    by 0x10ABF31: MPI_Init_thread (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libpmpich.8.dylib)
> ==10248==    by 0x112770C: MPID_Init (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libmpich.8.dylib)
> ==10248==    by 0x1177703: MPIR_Init_thread (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libmpich.8.dylib)
> ==10247==    by 0x41B38: PetscInitialize (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libpetsc.dylib)
> ==10247==    by 0x100001448: main (in ./ex19)
> ==10247==
> ==10248==    by 0x10ABF31: MPI_Init_thread (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libpmpich.8.dylib)
> ==10248==    by 0x41B38: PetscInitialize (in
> /Users/barrysmith/Src/petsc-dev/arch-opt/lib/libpetsc.dylib)
> ==10248==    by 0x100001448: main (in ./ex19)
> ==10248==
>
>
>
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