[petsc-dev] Error in make test

Shri abhyshr at mcs.anl.gov
Sat May 5 09:55:30 CDT 2012


I've disabled the threadcomm code temporarily, so hopefully your code should run as before now. Please pull and retry. Thanks, Shri ----- Original Message -----
> Same error on make test.
> Moreover, I got some mpi errors running my fortran codes and PETSc
> doesn't show the traceback
> I can only see that the problem occurs in PetscInitialize
> Here is the cryptic output from MPI (openmpi.1.4.5)
> [neo155:25438] *** An error occurred in MPI_Attr_get
> [neo155:25438] *** on communicator MPI COMMUNICATOR 3 DUP FROM 1
> [neo155:25438] *** MPI_ERR_OTHER: known error not in list
> [neo155:25438] *** MPI_ERRORS_ARE_FATAL (your MPI job will now abort)
> 2012/5/5 Shri < abhyshr at mcs.anl.gov >
> > I pushed some changes to fix these errors. Can you please pull and
> > retry.
> > > I had pulled some hours ago from
> > > http://petsc.cs.iit.edu/petsc/petsc-dev/rev/61898f35c333 and
> > > obtained
> > > the following error on make test
> > > [0]PETSC ERROR: PetscCommDuplicate() line 200 in
> > > /work/adz/zampini/MyWorkingCopyOfPetsc/petsc-dev/src/sys/objects/tagm.c
> > > [0]PETSC ERROR: PetscHeaderCreate_Private() line 51 in
> > > /work/adz/zampini/MyWorkingCopyOfPetsc/petsc-dev/src/sys/objects/inherit.c
> > > [0]PETSC ERROR: SNESCreate() line 1293 in
> > > /work/adz/zampini/MyWorkingCopyOfPetsc/petsc-dev/src/snes/interface/snes.c
> > > [0]PETSC ERROR: main() line 102 in
> > > src/snes/examples/tutorials/ex19.c
> > > I've just pulled and got the following error after typing make
> > > test
> > > [0]PETSC ERROR: PetscCommDestroy() line 246 in
> > > /work/adz/zampini/MyWorkingCopyOfPetsc/petsc-dev/src/sys/objects/tagm.c
> > > [0]PETSC ERROR: PetscThreadCommFinalizePackage() line 36 in
> > > /work/adz/zampini/MyWorkingCopyOfPetsc/petsc-dev/src/sys/threadcomm/interface/dlregisthreadcomm.c
> > > [0]PETSC ERROR: PetscRegisterFinalizeAll() line 313 in
> > > /work/adz/zampini/MyWorkingCopyOfPetsc/petsc-dev/src/sys/objects/destroy.c
> > > [0]PETSC ERROR: PetscFinalize() line 1080 in
> > > /work/adz/zampini/MyWorkingCopyOfPetsc/petsc-dev/src/sys/objects/pinit.
> > > I did not configure for a threaded version of PETSc.
> > > --
> > > Stefano
> --
> Stefano
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