FW: pnetcdf test/DRY RUN Error in wrf simulation

[BasitAli Khan]

Hi there,
I sent you the following email a a weak ago regarding pnetcdf  make check  errors, but did not get response. I used this pnetcdf to compile netCDF library 4.1.2. The pnetcdf was successfully linked and netCDF was successfully compiled. I ran a WRF simulation which also was completed successfully, however, the log file rsl.out.0000 (attached ) has several (DRY RUN) errors that are originating from pnetCDF. I am wondering what these errors are and would they be affecting my simulation in anyway?

Thanks in advance and please do REPLY this email.

Best regards,
b:)
----
Basit A. Khan, Ph.D.
Postdoctoral Research Fellow
Division of Physical Sciences & Engineering
Office# 3204, Level 3, Building 1,
King Abdullah University of Science & Technology
4700 King Abdullah Blvd, Box 2753, Thuwal 23955 –6900,
Kingdom of Saudi Arabia.

Office: +966(0)12 808 0276,  Mobile: +966(0)5 0860 3617
E-mail: basitali.khan at kaust.edu.sa<mailto:basitali.khan at kaust.edu.sa>
Skype name: basit.a.khan

From: KAUST <basitali.khan at kaust.edu.sa<mailto:basitali.khan at kaust.edu.sa>>
Date: Wednesday, May 28, 2014 3:05 PM
To: "parallel-netcdf at mcs.anl.gov<mailto:parallel-netcdf at mcs.anl.gov>" <parallel-netcdf at mcs.anl.gov<mailto:parallel-netcdf at mcs.anl.gov>>
Subject: pnetcdf test

Hi there,
I am new to pnetcdf. I want to compile it for faster IO  of WRF model on our bluegeneP with Linux RedHat 10 on it. I apparently successfully installed the latest version of pnetcdf 1.4.1, however when i run  'make testing', i got few errors (log file attached).  I would greatly appreciate if you could have a look and advise where i am going wrong.

The compilation of parallel netcdf created 4 directories. The contents of these dir are as follows:

/lib/libpnetcdf.a
/include/pnetcdf.h  pnetcdf.inc  pnetcdf.mod
/bin/ncmpidiff  ncmpidump  ncmpigen  ncmpivalid
/man/man1/ncmpidiff.1  ncmpidump.1  ncmpigen.1  ncmpivalid.1
/man/man3/pnetcdf.3  pnetcdf_f77.3  pnetcdf_f90.3


Another question is that, do i have to do anything special to use it with WRF?

Thanks in advance and best regards,


b:)
----
Basit A. Khan, Ph.D.
Postdoctoral Research Fellow
Division of Physical Sciences & Engineering
Office# 3204, Level 3, Building 1,
King Abdullah University of Science & Technology
4700 King Abdullah Blvd, Box 2753, Thuwal 23955 –6900,
Kingdom of Saudi Arabia.

Office: +966(0)12 808 0276,  Mobile: +966(0)5 0860 3617
E-mail: basitali.khan at kaust.edu.sa<mailto:basitali.khan at kaust.edu.sa>
Skype name: basit.a.khan

________________________________

This message and its contents including attachments are intended solely for the original recipient. If you are not the intended recipient or have received this message in error, please notify me immediately and delete this message from your computer system. Any unauthorized use or distribution is prohibited. Please consider the environment before printing this email.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.mcs.anl.gov/pipermail/parallel-netcdf/attachments/20140604/76dd2f6d/attachment-0001.html>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: test.log
Type: application/octet-stream
Size: 16377 bytes
Desc: test.log
URL: <http://lists.mcs.anl.gov/pipermail/parallel-netcdf/attachments/20140604/76dd2f6d/attachment-0002.obj>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: rsl.out.0000
Type: application/octet-stream
Size: 291858 bytes
Desc: rsl.out.0000
URL: <http://lists.mcs.anl.gov/pipermail/parallel-netcdf/attachments/20140604/76dd2f6d/attachment-0003.obj>