Building errors relating to undefined reference of 'nfmpi_*'

[Wei-keng Liao]

Hi, Li,

Rob has pointed out the problem and suggested you a solution.
Please give it a try and let us know if that works.

Wei-keng

On May 30, 2013, at 8:08 PM, Li Dong wrote:

> Dear Wei-keng,
> 
> Thank you for helping! Here is the output in the attachment.
> 
> Li
> 
> <make.output>
> 
> -----------------------------------------
> Dr. Li Dong (董理)
> LASG, Institute of Atmospheric Physics
> Chinese Academy of Sciences
> P.O. Box 9804
> Beijing 100029, China
> Phone: 8610-8299 5143
> 
> 在 2013-5-30，下午10:43，Wei-keng Liao <wkliao at ece.northwestern.edu> 写道：
> 
>> Hi, Li
>> 
>> It looks like the fortran part of PnetCDF failed to build.
>> Could you send us the standard output from the screen when you run "make" command?
>> You can do the following command and send us the file "make.output".
>> 
>> make -s clean; make >& make.output
>> 
>> 
>> Wei-keng
>> 
>> On May 30, 2013, at 2:48 AM, Li Dong wrote:
>> 
>>> Dear PnetCDF supporters,
>>> 
>>> When I build parallel-netcdf on our server, I invoked 'make tests' after 'make' and encountered the following errors:
>>> 
>>> /apps/intel/impi/4.0.2.003/intel64/bin/mpiifort -o bigrecords bigrecords.o -L../../src/lib  -lpnetcdf
>>> bigrecords.o: In function `MAIN__':
>>> bigrecords.F:(.text+0xb0): undefined reference to `nfmpi_create_'
>>> bigrecords.F:(.text+0xe6): undefined reference to `nfmpi_def_dim_'
>>> bigrecords.F:(.text+0x12b): undefined reference to `nfmpi_def_dim_'
>>> bigrecords.F:(.text+0x170): undefined reference to `nfmpi_def_dim_'
>>> bigrecords.F:(.text+0x1c2): undefined reference to `nfmpi_def_var_'
>>> bigrecords.F:(.text+0x214): undefined reference to `nfmpi_def_var_'
>>> bigrecords.F:(.text+0x282): undefined reference to `nfmpi_def_var_'
>>> bigrecords.F:(.text+0x2d3): undefined reference to `nfmpi_put_att_text_'
>>> bigrecords.F:(.text+0x324): undefined reference to `nfmpi_put_att_text_'
>>> bigrecords.F:(.text+0x375): undefined reference to `nfmpi_put_att_text_'
>>> bigrecords.F:(.text+0x3c6): undefined reference to `nfmpi_put_att_text_'
>>> bigrecords.F:(.text+0x417): undefined reference to `nfmpi_put_att_text_'
>>> bigrecords.o:bigrecords.F:(.text+0x468): more undefined references to `nfmpi_put_att_text_' follow
>>> bigrecords.o: In function `MAIN__':
>>> bigrecords.F:(.text+0x486): undefined reference to `nfmpi_enddef_'
>>> bigrecords.F:(.text+0x4d2): undefined reference to `nfmpi_put_vara_real_all_'
>>> bigrecords.F:(.text+0x557): undefined reference to `nfmpi_put_vara_double_all_'
>>> bigrecords.F:(.text+0x57e): undefined reference to `nfmpi_close_'
>>> bigrecords.F:(.text+0x5c2): undefined reference to `nfmpi_open_'
>>> bigrecords.F:(.text+0x5f2): undefined reference to `nfmpi_inq_varid_'
>>> bigrecords.F:(.text+0x63e): undefined reference to `nfmpi_get_vara_double_all_'
>>> bigrecords.F:(.text+0x65c): undefined reference to `nfmpi_close_'
>>> bigrecords.o: In function `writerecs_':
>>> bigrecords.F:(.text+0x1165): undefined reference to `nfmpi_put_vara_double_all_'
>>> ../../src/lib/libpnetcdf.a(strerrorf.o): In function `nfmpi_strerror_':
>>> strerrorf.f:(.text+0x15): undefined reference to `nfmpi_xstrerror_'
>>> make[2]: *** [bigrecords] Error 1
>>> 
>>> The config.log file is in the attach and the results of 'uname -a' are:
>>> 
>>> Linux ln1 2.6.18-194.17.1.0.1.el5_lustre.1.8.5 #1 SMP Wed Aug 3 18:09:09 CST 2011 x86_64 x86_64 x86_64 GNU/Linux
>>> 
>>> How to solve this problem? Thanks in advance!
>>> 
>>> Best regards,
>>> 
>>> Li
>>> 
>>> <config.log>
>>> 
>>> -----------------------------------------
>>> Dr. Li Dong (董理)
>>> LASG, Institute of Atmospheric Physics
>>> Chinese Academy of Sciences
>>> P.O. Box 9804
>>> Beijing 100029, China
>>> Phone: 8610-8299 5143
>>> 
>> 
>