paralell-netcdf-1.1.1 installation problem

Wei-keng Liao wkliao at ece.northwestern.edu
Wed Feb 3 01:09:41 CST 2010


Hi, Shawn

Did you run "autoreconf" before "configure"?

Can you send us the standard output from you configure run
and the file macros.make?

Wei-keng


On Feb 2, 2010, at 11:30 PM, Shawn Kim wrote:

> Hi, all
>
> I recently installed the newest parallel-netcdf-1.1.1 on two  
> different machines with different (MPICH2 + PVFS2)'s.
> I succeeded it on one machine but I failed it on the other machine.  
> (I slighly modified MPI_IO function calls but I believed it didn't  
> affect the compilation.)
> Both are in the same clusters. Error occurred while compiling libf.
>
> /bin/rm -f pnetcdf.F90
> echo "module pnetcdf" > pnetcdf.F90
> /bin/cat pnetcdf.inc >> pnetcdf.F90
> echo "end module pnetcdf" >> pnetcdf.F90
> mpif77 -c  -c pnetcdf.F90
> g77: pnetcdf.F90: linker input file unused because linking not done
> /usr/bin/install -c -d -m 755 /home/mdl/yuazhang/IOTracing/benchmark/ 
> parallel-netcdf-1.1.1/install/include
> /usr/bin/install -c -m 644 pnetcdf.inc pnetcdf.mod /home/mdl/ 
> yuazhang/IOTracing/benchmark/parallel-netcdf-1.1.1/install/include
> /usr/bin/install: cannot stat `pnetcdf.mod': No such file or directory
> make: *** [/home/mdl/yuazhang/IOTracing/benchmark/parallel- 
> netcdf-1.1.1/install/include/pnetcdf.inc] Error 1
>
> The error part is:
> mpif77 -c  -c pnetcdf.F90
> g77: pnetcdf.F90: linker input file unused because linking not done
>
> It seems to me like fortran compiler mismatch, but in the other  
> machine it works without any error or warning. I did set environment  
> variable correctly like:
>
> CC=mpicc
> FC=mpif77
> F90=mpif90
> MPICC=mpicc
> MPIF77=mpif77
> MPIF90=mpif90
>
> What else can I do?
>
> Thank you in advance.
>
> - Shawn



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