[Nek5000-users] Error while compiling exo2nek

nek5000-users at lists.mcs.anl.gov nek5000-users at lists.mcs.anl.gov
Mon Nov 20 19:10:50 CST 2017


Hi all,

I keep getting an error while compiling exo2nek.

Warning: Type mismatch in argument ‘a’ at (1); passed REAL(8) to
CHARACTER(1)
gcc -mcmodel=medium  -c -DUNDERSCORE ../../core/byte.c
gfortran -I/home/adutta/lib/seacas/include -mcmodel=medium -c
-fdefault-real-8 ../../core/speclib.f
gfortran -I/home/adutta/lib/seacas/include -mcmodel=medium -c
-fdefault-real-8 mxm.f
gfortran -I/home/adutta/lib/seacas/include -mcmodel=medium -fdefault-real-8
-o /home/adutta/Nek5000/bin/exo2nek exo2nek.o byte.o speclib.o mxm.o
-L/home/adutta/lib/netcdf/lib -L/home/adutta/lib/seacas/lib -lnetcdf
-lexodus -lexoIIv2for32
make[1]: Leaving directory '/home/adutta/Nek5000/tools/exo2nek'

It comes up as a warning but exo2nek is probably not being built correctly
as whenever I try to run it I get a *seg fault error,*

I have made all the changes as directed by the README file and installed
seacas and netcdf. The maketools file has been suitably modified as well.

bin_nek_tools=`cd ../bin && pwd`

# specify your compilers here
F77="gfortran -I$HOME/lib/seacas/include"
CC="gcc"

# linking flags
#USR_LFLAGS="-L$HOME/lib"
USR_LFLAGS="-L$HOME/lib/netcdf/lib -L$HOME/lib/seacas/lib"

Has anyone else run into this issue?

Sincerely,




-- 

*Amitvikram Dutta*

Graduate Research Assistant

Fluid Mechanics Research Lab

University of Waterloo
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