[Swift-user] [SWIFT on Beagle]Cannot Execute Correctly After Submitting Job

[Weiyang Wang]

Hello,

I've meet problems when submitting jobs using Swift.

My Command Line is like:

swift -sites.file ./mysites.xml  -tc.file ./tc.data largescale.swift

My mysites.xml is like
<config>
<pool handle="pbs">
    <execution provider="pbs" url="none" jobManager="local:pbs"/>
    <profile namespace="globus" key="maxwalltime">0:20:00</profile>
    <profile namespace="globus" key="workersPerNode">8</profile>
    <profile namespace="globus" key="ppn">8</profile>
    <!-- <profile namespace="globus"
key="internalHostname">172.5.86.6</profile>-->
    <profile namespace="globus" key="nodeGranularity">1</profile>
    <profile namespace="globus" key="maxNodes">5</profile>
    <profile namespace="karajan" key="jobThrottle">1.99</profile>
    <profile namespace="karajan" key="initialScore">10000</profile>
    <profile namespace="globus" key="project">CI-SES000031</profile>
    <!--gridftp  url="local://localhost" />-->
    <filesystem provider="local"/>
    <!--scratch>/home/frankwang/tmp</scratch>-->

 <workdirectory>/gpfs/pads/projects/CI-SES000031/csm/tempswiftwork</workdirectory>
</pool>
</config>

My tc.data is like,
pbs             echo    /bin/echo       INSTALLED       INTEL32::LINUX  null
pbs             sh      /bin/bash       INSTALLED       INTEL32::LINUX  null


In my swift script I'm running some gfortran compiled programs(I wrap my
fortran programs in sh files), and in my error log file, it shows that

/gpfs/pads/projects/CI-SES000031/csm/DSSAT040.EXE: error while loading
shared libraries: libgfortran.so.3: cannot open shared object file: No such
file or directory

I didn't meet the same problem when I run these on PADS, and after I swap
the module to PrgEnv-gnu when logging onto Beagle I can also run this
DSSAT040.EXE.
My guess is,  I submit the jobs to a Non-GNU Environment in Beagle.

How can I correct this?

Thank you.

Weiyang
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.mcs.anl.gov/pipermail/swift-user/attachments/20110426/d3d40657/attachment.html>