[Swift-user] Execution error

Michael Wilde wilde at mcs.anl.gov
Thu Apr 30 12:20:03 CDT 2009


Yue, I'm looking at your logs.

I see that swift is encountering qsub errors (code "-68").

Did you either get emails from qsub on Mercury, or have logs in your 
home dir there or your .globus dir? (I cant access your home directory).

Can you look for log files in both $HOME and below .globus (maybe 
deeper) for that time period, and put them somewhere (like back on CI in 
a tarball) where we can access them?

- Mike



On 4/30/09 12:08 PM, Yue, Chen - BMD wrote:
> Hi,
>  
> I came back to re-run my application on NCSA Mercury which was tested 
> successfully last week after I just set up coasters with swift 0.9, but 
> I got many messages like the following:
>  
> Progress:  Stage in:219  Submitting:803  Submitted:1
> Progress:  Stage in:129  Submitting:703  Submitted:190 Failed but can 
> retry:1
> Progress:  Stage in:38  Submitting:425  Submitted:556 Failed but can retry:4
> Failed to transfer wrapper log from 
> PTMap2-unmod-20090430-1203-r19dxq10/info/h on NCSA_MERCURY
> Failed to transfer wrapper log from 
> PTMap2-unmod-20090430-1203-r19dxq10/info/j on NCSA_MERCURY
> Failed to transfer wrapper log from 
> PTMap2-unmod-20090430-1203-r19dxq10/info/p on NCSA_MERCURY
> Failed to transfer wrapper log from 
> PTMap2-unmod-20090430-1203-r19dxq10/info/1 on NCSA_MERCURY
> Failed to transfer wrapper log from 
> PTMap2-unmod-20090430-1203-r19dxq10/info/b on NCSA_MERCURY
> Failed to transfer wrapper log from 
> PTMap2-unmod-20090430-1203-r19dxq10/info/c on NCSA_MERCURY
> Progress:  Stage in:1  Submitted:1013  Active:1 Failed but can retry:8
> Progress:  Submitted:1011  Active:1 Failed but can retry:11
> The log file for the successful run last week is ;
> /home/yuechen/PTMap2/PTMap2-unmod-20090422-1216-4s3037gf.log
>  
> The log file for the failed run is :
> /home/yuechen/PTMap2/PTMap2-unmod-20090430-1151-rf2uuhb7.log
>  
> I don't think I did anything different, so I don't know why this time 
> they failed. The sites.xml for Mercury is:
>  
>  <pool handle="NCSA_MERCURY">
>     <gridftp url="gsiftp://gridftp-hg.ncsa.teragrid.org"/>
>     <execution provider="coaster" url="grid-hg.ncsa.teragrid.org" 
> jobManager="gt2:PBS"/>
>     <workdirectory>/gpfs_scratch1/yuechen/swiftwork</workdirectory>
>     <profile namespace="globus" key="queue">debug</profile>
>  </pool>
>  
> Thank you for help!
>  
> Chen, Yue
>  
>  
> 
>  
> 
>  
> 
> 
>  
> 
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