[Swift-user] Execution error
Michael Wilde
wilde at mcs.anl.gov
Thu Apr 30 12:20:03 CDT 2009
Yue, I'm looking at your logs.
I see that swift is encountering qsub errors (code "-68").
Did you either get emails from qsub on Mercury, or have logs in your
home dir there or your .globus dir? (I cant access your home directory).
Can you look for log files in both $HOME and below .globus (maybe
deeper) for that time period, and put them somewhere (like back on CI in
a tarball) where we can access them?
- Mike
On 4/30/09 12:08 PM, Yue, Chen - BMD wrote:
> Hi,
>
> I came back to re-run my application on NCSA Mercury which was tested
> successfully last week after I just set up coasters with swift 0.9, but
> I got many messages like the following:
>
> Progress: Stage in:219 Submitting:803 Submitted:1
> Progress: Stage in:129 Submitting:703 Submitted:190 Failed but can
> retry:1
> Progress: Stage in:38 Submitting:425 Submitted:556 Failed but can retry:4
> Failed to transfer wrapper log from
> PTMap2-unmod-20090430-1203-r19dxq10/info/h on NCSA_MERCURY
> Failed to transfer wrapper log from
> PTMap2-unmod-20090430-1203-r19dxq10/info/j on NCSA_MERCURY
> Failed to transfer wrapper log from
> PTMap2-unmod-20090430-1203-r19dxq10/info/p on NCSA_MERCURY
> Failed to transfer wrapper log from
> PTMap2-unmod-20090430-1203-r19dxq10/info/1 on NCSA_MERCURY
> Failed to transfer wrapper log from
> PTMap2-unmod-20090430-1203-r19dxq10/info/b on NCSA_MERCURY
> Failed to transfer wrapper log from
> PTMap2-unmod-20090430-1203-r19dxq10/info/c on NCSA_MERCURY
> Progress: Stage in:1 Submitted:1013 Active:1 Failed but can retry:8
> Progress: Submitted:1011 Active:1 Failed but can retry:11
> The log file for the successful run last week is ;
> /home/yuechen/PTMap2/PTMap2-unmod-20090422-1216-4s3037gf.log
>
> The log file for the failed run is :
> /home/yuechen/PTMap2/PTMap2-unmod-20090430-1151-rf2uuhb7.log
>
> I don't think I did anything different, so I don't know why this time
> they failed. The sites.xml for Mercury is:
>
> <pool handle="NCSA_MERCURY">
> <gridftp url="gsiftp://gridftp-hg.ncsa.teragrid.org"/>
> <execution provider="coaster" url="grid-hg.ncsa.teragrid.org"
> jobManager="gt2:PBS"/>
> <workdirectory>/gpfs_scratch1/yuechen/swiftwork</workdirectory>
> <profile namespace="globus" key="queue">debug</profile>
> </pool>
>
> Thank you for help!
>
> Chen, Yue
>
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