[Swift-devel] coaster error on Midway

[Lorenzo Pesce]

Is there a current trunk module installed on Beagle?

It would be handy, since usually our users end up needing to use trunk....


On Oct 19, 2012, at 6:04 PM, Michael Wilde wrote:

> Indeed, when I used latest trunk, the error has not recurred, and Ive sone several 1000-job runs of the EpiSnp app.
> 
> But that means that the trunk version in Midway's default swift module has this bug.
> 
> Lets talk on Monday about how to make and test an 0.94 release, which I would define simply as "a trustable trunk snapshot", and then to get that out to all systems and users.
> 
> - Mike
> 
> 
> 
> 
> ----- Original Message -----
>> From: "David Kelly" <davidk at ci.uchicago.edu>
>> To: "Michael Wilde" <wilde at mcs.anl.gov>
>> Cc: "swift-devel" <swift-devel at ci.uchicago.edu>, "Mihael Hategan" <hategan at mcs.anl.gov>
>> Sent: Friday, October 19, 2012 5:59:56 PM
>> Subject: Re: coaster error on Midway
>> I remember something like this happening in one of the versions of
>> trunk - I believe it has been fixed in the latest version.
>> 
>> ----- Original Message -----
>>> From: "Michael Wilde" <wilde at mcs.anl.gov>
>>> To: "David Kelly" <davidk at ci.uchicago.edu>, "Mihael Hategan"
>>> <hategan at mcs.anl.gov>
>>> Cc: "swift-devel" <swift-devel at ci.uchicago.edu>
>>> Sent: Friday, October 19, 2012 3:10:01 PM
>>> Subject: coaster error on Midway
>>> Im getting the error below on Midway (running the swift from module
>>> load swift)
>>> 
>>> Is this a know issue, with a known fix?
>>> 
>>> I'll try latest trunk next.
>>> 
>>> This happened both without and with provider staging.
>>> 
>>> I will post bug with log files if it recurs with latest trunk.
>>> 
>>> - Mike
>>> 
>>> Swift trunk swift-r5939 cog-r3472
>>> 
>>> RunID: 20121019-2005-yptzr8l6
>>> Progress: time: Fri, 19 Oct 2012 20:05:54 +0000
>>> Progress: time: Fri, 19 Oct 2012 20:05:56 +0000 Stage in:1
>>> Submitted:99
>>> Progress: time: Fri, 19 Oct 2012 20:05:57 +0000 Stage in:33
>>> Submitted:67
>>> Progress: time: Fri, 19 Oct 2012 20:05:58 +0000 Stage in:56
>>> Submitted:36 Active:8
>>> Progress: time: Fri, 19 Oct 2012 20:05:59 +0000 Stage in:65
>>> Submitted:3 Active:32
>>> Progress: time: Fri, 19 Oct 2012 20:06:00 +0000 Stage in:51
>>> Active:49
>>> Progress: time: Fri, 19 Oct 2012 20:06:08 +0000 Active:99 Stage
>>> out:1
>>> Progress: time: Fri, 19 Oct 2012 20:06:24 +0000 Active:96 Finished
>>> successfully:4
>>> Progress: time: Fri, 19 Oct 2012 20:06:28 +0000 Active:95 Stage
>>> out:1
>>> Finished successfully:4
>>> Progress: time: Fri, 19 Oct 2012 20:06:29 +0000 Active:74 Stage
>>> out:12
>>> Finished successfully:14
>>> Progress: time: Fri, 19 Oct 2012 20:06:30 +0000 Active:52 Stage
>>> out:3
>>> Finished successfully:45
>>> Progress: time: Fri, 19 Oct 2012 20:06:31 +0000 Active:25 Stage
>>> out:24
>>> Finished successfully:51
>>> Exception caught while processing reply
>>> java.lang.IllegalArgumentException: Wrong data size: 4. Data was
>>> @].z
>>> at
>>> org.globus.cog.karajan.workflow.service.RequestReply.unpackLong(RequestReply.java:237)
>>> at
>>> org.globus.cog.karajan.workflow.service.RequestReply.getInDataAsLong(RequestReply.java:232)
>>> at
>>> org.globus.cog.karajan.workflow.service.commands.HeartBeatCommand.replyReceived(HeartBeatCommand.java:40)
>>> at
>>> org.globus.cog.karajan.workflow.service.channels.AbstractKarajanChannel.handleReply(AbstractKarajanChannel.java:401)
>>> at
>>> org.globus.cog.karajan.workflow.service.channels.AbstractStreamKarajanChannel.stepNIO(AbstractStreamKarajanChannel.java:234)
>>> at
>>> org.globus.cog.karajan.workflow.service.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
>>> at
>>> org.globus.cog.karajan.workflow.service.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
>>> Exception caught while processing reply
>>> java.lang.IllegalArgumentException: Wrong data size: 4. Data was
>>> @].z
>>> at
>>> org.globus.cog.karajan.workflow.service.RequestReply.unpackLong(RequestReply.java:237)
>>> at
>>> org.globus.cog.karajan.workflow.service.RequestReply.getInDataAsLong(RequestReply.java:232)
>>> at
>>> org.globus.cog.karajan.workflow.service.commands.HeartBeatCommand.replyReceived(HeartBeatCommand.java:40)
>>> at
>>> org.globus.cog.karajan.workflow.service.channels.AbstractKarajanChannel.handleReply(AbstractKarajanChannel.java:401)
>>> at
>>> org.globus.cog.karajan.workflow.service.channels.AbstractStreamKarajanChannel.stepNIO(AbstractStreamKarajanChannel.java:234)
>>> at
>>> org.globus.cog.karajan.workflow.service.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
>>> at
>>> org.globus.cog.karajan.workflow.service.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
>>> Exception caught while processing reply
>>> java.lang.IllegalArgumentException: Wrong data size: 4. Data was
>>> @].z
>>> at
>>> org.globus.cog.karajan.workflow.service.RequestReply.unpackLong(RequestReply.java:237)
>>> at
>>> org.globus.cog.karajan.workflow.service.RequestReply.getInDataAsLong(RequestReply.java:232)
>>> at
>>> org.globus.cog.karajan.workflow.service.commands.HeartBeatCommand.replyReceived(HeartBeatCommand.java:40)
>>> at
>>> org.globus.cog.karajan.workflow.service.channels.AbstractKarajanChannel.handleReply(AbstractKarajanChannel.java:401)
>>> at
>>> org.globus.cog.karajan.workflow.service.channels.AbstractStreamKarajanChannel.stepNIO(AbstractStreamKarajanChannel.java:234)
>>> at
>>> org.globus.cog.karajan.workflow.service.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
>>> at
>>> org.globus.cog.karajan.workflow.service.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
>>> Progress: time: Fri, 19 Oct 2012 20:06:33 +0000 Stage out:10
>>> Finished
>>> successfully:90
>>> Final status: Fri, 19 Oct 2012 20:06:33 +0000 Finished
>>> successfully:100
>>> mid$
>>> 
>>> 
>>> --
>>> Michael Wilde
>>> Computation Institute, University of Chicago
>>> Mathematics and Computer Science Division
>>> Argonne National Laboratory
> 
> -- 
> Michael Wilde
> Computation Institute, University of Chicago
> Mathematics and Computer Science Division
> Argonne National Laboratory
> 
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