[Swift-devel] Issues with Montage & Swift-CDM
Jonathan Monette
jonmon at mcs.anl.gov
Wed Mar 21 22:19:54 CDT 2012
I can set up SwiftMontage on PADS(it may be there but outdated). Running using surveyor had some problems in the past(the compute nodes couldn't find the Montage binaries). I will get back to debugging that later, I think I have a fix.
On Mar 21, 2012, at 6:55 PM, Emalayan Vairavanathan wrote:
> Hi Justin,
>
> Thank you for looking at the logs. Please find my answers below and let me know if I can help you in the debugging process.
>
> Does the montage-swift workflow work for you without CDM?
> >> Yes, it works successfully with out CDM on our cluster. (I tried with swift-0.93 and coasters)
>
> Is there a machine on which we can all try to run this locally? (PADS login node?)
> >> I am not aware whether we can do it on PADS and I think i do not have access to PADS. I tired montage-swift on our cluster with coasters.
>
> But I just setup everything on Surveyor and it works locally on the head node. You can find the setup here.
> /home/emalayan/app/montage-swift-cdm/SwiftMontage/scripts
>
> Please let me know if you need more information to recreate the problem.
>
> Thank you
> Emalayan
>
> From: Justin M Wozniak <wozniak at mcs.anl.gov>
> To: Emalayan Vairavanathan <svemalayan at yahoo.com>
> Cc: "swift-devel at ci.uchicago.edu" <swift-devel at ci.uchicago.edu>; MosaStore <mosastore at googlegroups.com>; matei <matei at ece.ubc.ca>
> Sent: Wednesday, 21 March 2012 1:56 PM
> Subject: Re: [Swift-devel] Issues with Montage & Swift-CDM
>
> Hi Emalayan
> I just took a look at this log. Does the montage-swift workflow work for you without CDM?
> Is there a machine on which we can all try to run this locally? (PADS login node?)
> Justin
>
> On Mon, 19 Mar 2012, Emalayan Vairavanathan wrote:
>
> > Hi Jon and All,
> >
> > I tried to run the montage-swift workflow on my local machine with CDM rules enabled. The workflow is failing (only first stage was completed successfully). For me it seems that some stages of the workflow expect the input to be located in a specific location.
> >
> > I am using swift-0.93. I have attached the log files, site files, configuration files and swift stderr/out with this mail. It would be great if you can look at this issue and help me.
> >
> >
> > (Note: Due to similar issue ModFTDock-swift workflow also fails on my local machine when CDM rules enabled)
> >
> > Thank you
> > Emalayan
>
> -- Justin M Wozniak
>
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