[Swift-devel] Mosaswift update

Emalayan Vairavanathan svemalayan at yahoo.com
Wed Mar 14 16:03:05 CDT 2012


Hi Jon,

Great, Thank you very much. Could you please send me the setup ? 


Thank you
Emalayan



________________________________
 From: Jonathan Monette <jonmon at mcs.anl.gov>
To: Justin M Wozniak <wozniak at mcs.anl.gov> 
Cc: "swift-devel at ci.uchicago.edu Devel" <swift-devel at ci.uchicago.edu>; MosaStore <mosastore at googlegroups.com> 
Sent: Wednesday, 14 March 2012 2:00 PM
Subject: Re: [Swift-devel] Mosaswift update
 
So that actually fixed the issue.  So we have a working example of using CDM and intermediate file storage that Emalayan can use for testing his mosa store set up.

On Mar 14, 2012, at 3:05 PM, Jonathan Monette wrote:

> Oh, thanks, didn't catch that.  Trying another run right now but I think someone is using all of surveyor right now, but manual coaster service job is stuck in the queue state.
> 
> 
> On Mar 14, 2012, at 3:02 PM, Justin M Wozniak wrote:
> 
>> 
>> Ok, then it's a typo on readlinE .
>> 
>> On Wed, 14 Mar 2012, Jonathan Monette wrote:
>> 
>>> I am not sure.  I thought readlink returned the absolute path of the link which is what I wanted to use.  I am not sure how readlink behaves on the compute nodes.  This was my first attempt at getting around the link but I do not think this is working.
>>> 
>>> On Mar 14, 2012, at 2:43 PM, Justin M Wozniak wrote:
>>> 
>>>> On Wed, 14 Mar 2012, Jonathan Monette wrote:
>>>> 
>>>>> I say semi working because I intended the script to build up output during the stages on the swift run and the final output would show that it was stored temporarily in /tmp.  This is not happening as the final output for the file contains only the last line(a Hello from <id> line). I believe this is due to how CDM using symlinks for the files that is matched, so a symlink is being overwritten instead of at the file it points to.  I ran into this problem in the past(but this is documented in the user guide) and just need verify that this is indeed the issue.
>>>> 
>>>> In the past, the application unlinked the link.  It looks like you are appending to the link.
>>>> 
>>>> infile=`readlink $1`
>>>> outfile=`readline $2`
>>>> cat $infile >> $outfile
>>>> 
>>>> Is there a case in which the readlink affects the behavior of this sequence?
>>>> 
>>>> Does readline work correctly on the BG/P compute node?
>>>> 
>>>>     Justin
>>>> 
>>>> --
>>>> Justin M Wozniak
>>> 
>>> 
>> 
>> -- 
>> Justin M Wozniak
> 
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