[Swift-devel] trunk error IndexOutOfBounds
Jonathan Monette
jonmon at utexas.edu
Mon Jun 13 21:28:28 CDT 2011
I seem to be getting this error
Executing script montage.swift
Check /autonfs/gpfs-pads/projects/CI-CCR000013/jonmon/Swift/Montage/m101_tutorial/run.0004 for output and debugging information
Swift svn swift-r4612 cog-r3162
RunID: 20110613-2124-ktnceob8
(input): found 10 files
null
Caused by: java.lang.IndexOutOfBoundsException
at java.io.FileInputStream.readBytes(Native Method)
at java.io.FileInputStream.read(FileInputStream.java:220)
at org.globus.cog.abstraction.impl.file.local.FileResourceImpl.getFile(FileResourceImpl.java:244)
at org.globus.cog.abstraction.impl.file.local.FileResourceImpl.putFile(FileResourceImpl.java:268)
at org.globus.cog.abstraction.impl.file.AbstractFileResource.putFile(AbstractFileResource.java:158)
at org.globus.cog.abstraction.impl.fileTransfer.DelegatedFileTransferHandler.doDestination(DelegatedFileTransferHandler.java:314)
at org.globus.cog.abstraction.impl.fileTransfer.CachingDelegatedFileTransferHandler.doDestination(CachingDelegatedFileTransferHandler.java:46)
at org.globus.cog.abstraction.impl.fileTransfer.DelegatedFileTransferHandler.run(DelegatedFileTransferHandler.java:487)
at java.lang.Thread.run(Thread.java:662)
null
Caused by: java.lang.IndexOutOfBoundsException
at java.io.FileInputStream.readBytes(Native Method)
at java.io.FileInputStream.read(FileInputStream.java:220)
at org.globus.cog.abstraction.impl.file.local.FileResourceImpl.getFile(FileResourceImpl.java:244)
at org.globus.cog.abstraction.impl.file.local.FileResourceImpl.putFile(FileResourceImpl.java:268)
at org.globus.cog.abstraction.impl.file.AbstractFileResource.putFile(AbstractFileResource.java:158)
at org.globus.cog.abstraction.impl.fileTransfer.DelegatedFileTransferHandler.doDestination(DelegatedFileTransferHandler.java:314)
at org.globus.cog.abstraction.impl.fileTransfer.CachingDelegatedFileTransferHandler.doDestination(CachingDelegatedFileTransferHandler.java:46)
at org.globus.cog.abstraction.impl.fileTransfer.DelegatedFileTransferHandler.run(DelegatedFileTransferHandler.java:487)
at java.lang.Thread.run(Thread.java:662)
null
Caused by: java.lang.IndexOutOfBoundsException
at java.io.FileInputStream.readBytes(Native Method)
at java.io.FileInputStream.read(FileInputStream.java:220)
at org.globus.cog.abstraction.impl.file.local.FileResourceImpl.getFile(FileResourceImpl.java:244)
at org.globus.cog.abstraction.impl.file.local.FileResourceImpl.putFile(FileResourceImpl.java:268)
at org.globus.cog.abstraction.impl.file.AbstractFileResource.putFile(AbstractFileResource.java:158)
at org.globus.cog.abstraction.impl.fileTransfer.DelegatedFileTransferHandler.doDestination(DelegatedFileTransferHandler.java:314)
at org.globus.cog.abstraction.impl.fileTransfer.CachingDelegatedFileTransferHandler.doDestination(CachingDelegatedFileTransferHandler.java:46)
at org.globus.cog.abstraction.impl.fileTransfer.DelegatedFileTransferHandler.run(DelegatedFileTransferHandler.java:487)
at java.lang.Thread.run(Thread.java:662)
null
Caused by: java.lang.IndexOutOfBoundsException
at java.io.FileInputStream.readBytes(Native Method)
at java.io.FileInputStream.read(FileInputStream.java:220)
at org.globus.cog.abstraction.impl.file.local.FileResourceImpl.getFile(FileResourceImpl.java:244)
at org.globus.cog.abstraction.impl.file.local.FileResourceImpl.putFile(FileResourceImpl.java:268)
at org.globus.cog.abstraction.impl.file.AbstractFileResource.putFile(AbstractFileResource.java:158)
at org.globus.cog.abstraction.impl.fileTransfer.DelegatedFileTransferHandler.doDestination(DelegatedFileTransferHandler.java:314)
at org.globus.cog.abstraction.impl.fileTransfer.CachingDelegatedFileTransferHandler.doDestination(CachingDelegatedFileTransferHandler.java:46)
at org.globus.cog.abstraction.impl.fileTransfer.DelegatedFileTransferHandler.run(DelegatedFileTransferHandler.java:487)
at java.lang.Thread.run(Thread.java:662)
null
Caused by: java.lang.IndexOutOfBoundsException
at java.io.FileInputStream.readBytes(Native Method)
at java.io.FileInputStream.read(FileInputStream.java:220)
at org.globus.cog.abstraction.impl.file.local.FileResourceImpl.getFile(FileResourceImpl.java:244)
at org.globus.cog.abstraction.impl.file.local.FileResourceImpl.putFile(FileResourceImpl.java:268)
at org.globus.cog.abstraction.impl.file.AbstractFileResource.putFile(AbstractFileResource.java:158)
at org.globus.cog.abstraction.impl.fileTransfer.DelegatedFileTransferHandler.doDestination(DelegatedFileTransferHandler.java:314)
at org.globus.cog.abstraction.impl.fileTransfer.CachingDelegatedFileTransferHandler.doDestination(CachingDelegatedFileTransferHandler.java:46)
at org.globus.cog.abstraction.impl.fileTransfer.DelegatedFileTransferHandler.run(DelegatedFileTransferHandler.java:487)
at java.lang.Thread.run(Thread.java:662)
null
Caused by: java.lang.IndexOutOfBoundsException
at java.io.FileInputStream.readBytes(Native Method)
at java.io.FileInputStream.read(FileInputStream.java:220)
at org.globus.cog.abstraction.impl.file.local.FileResourceImpl.getFile(FileResourceImpl.java:244)
at org.globus.cog.abstraction.impl.file.local.FileResourceImpl.putFile(FileResourceImpl.java:268)
at org.globus.cog.abstraction.impl.file.AbstractFileResource.putFile(AbstractFileResource.java:158)
at org.globus.cog.abstraction.impl.fileTransfer.DelegatedFileTransferHandler.doDestination(DelegatedFileTransferHandler.java:314)
at org.globus.cog.abstraction.impl.fileTransfer.CachingDelegatedFileTransferHandler.doDestination(CachingDelegatedFileTransferHandler.java:46)
at org.globus.cog.abstraction.impl.fileTransfer.DelegatedFileTransferHandler.run(DelegatedFileTransferHandler.java:487)
at java.lang.Thread.run(Thread.java:662)
null
Caused by: java.lang.IndexOutOfBoundsException
at java.io.FileInputStream.readBytes(Native Method)
at java.io.FileInputStream.read(FileInputStream.java:220)
at org.globus.cog.abstraction.impl.file.local.FileResourceImpl.getFile(FileResourceImpl.java:244)
at org.globus.cog.abstraction.impl.file.local.FileResourceImpl.putFile(FileResourceImpl.java:268)
at org.globus.cog.abstraction.impl.file.AbstractFileResource.putFile(AbstractFileResource.java:158)
at org.globus.cog.abstraction.impl.fileTransfer.DelegatedFileTransferHandler.doDestination(DelegatedFileTransferHandler.java:314)
at org.globus.cog.abstraction.impl.fileTransfer.CachingDelegatedFileTransferHandler.doDestination(CachingDelegatedFileTransferHandler.java:46)
at org.globus.cog.abstraction.impl.fileTransfer.DelegatedFileTransferHandler.run(DelegatedFileTransferHandler.java:487)
at java.lang.Thread.run(Thread.java:662)
null
Caused by: java.lang.IndexOutOfBoundsException
at java.io.FileInputStream.readBytes(Native Method)
at java.io.FileInputStream.read(FileInputStream.java:220)
at org.globus.cog.abstraction.impl.file.local.FileResourceImpl.getFile(FileResourceImpl.java:244)
at org.globus.cog.abstraction.impl.file.local.FileResourceImpl.putFile(FileResourceImpl.java:268)
at org.globus.cog.abstraction.impl.file.AbstractFileResource.putFile(AbstractFileResource.java:158)
at org.globus.cog.abstraction.impl.fileTransfer.DelegatedFileTransferHandler.doDestination(DelegatedFileTransferHandler.java:314)
at org.globus.cog.abstraction.impl.fileTransfer.CachingDelegatedFileTransferHandler.doDestination(CachingDelegatedFileTransferHandler.java:46)
at org.globus.cog.abstraction.impl.fileTransfer.DelegatedFileTransferHandler.run(DelegatedFileTransferHandler.java:487)
at java.lang.Thread.run(Thread.java:662)
null
Caused by: java.lang.IndexOutOfBoundsException
at java.io.FileInputStream.readBytes(Native Method)
at java.io.FileInputStream.read(FileInputStream.java:220)
at org.globus.cog.abstraction.impl.file.local.FileResourceImpl.getFile(FileResourceImpl.java:244)
at org.globus.cog.abstraction.impl.file.local.FileResourceImpl.putFile(FileResourceImpl.java:268)
at org.globus.cog.abstraction.impl.file.AbstractFileResource.putFile(AbstractFileResource.java:158)
at org.globus.cog.abstraction.impl.fileTransfer.DelegatedFileTransferHandler.doDestination(DelegatedFileTransferHandler.java:314)
at org.globus.cog.abstraction.impl.fileTransfer.CachingDelegatedFileTransferHandler.doDestination(CachingDelegatedFileTransferHandler.java:46)
at org.globus.cog.abstraction.impl.fileTransfer.DelegatedFileTransferHandler.run(DelegatedFileTransferHandler.java:487)
at java.lang.Thread.run(Thread.java:662)
null
Caused by: java.lang.IndexOutOfBoundsException
at java.io.FileInputStream.readBytes(Native Method)
at java.io.FileInputStream.read(FileInputStream.java:220)
at org.globus.cog.abstraction.impl.file.local.FileResourceImpl.getFile(FileResourceImpl.java:244)
at org.globus.cog.abstraction.impl.file.local.FileResourceImpl.putFile(FileResourceImpl.java:268)
at org.globus.cog.abstraction.impl.file.AbstractFileResource.putFile(AbstractFileResource.java:158)
at org.globus.cog.abstraction.impl.fileTransfer.DelegatedFileTransferHandler.doDestination(DelegatedFileTransferHandler.java:314)
at org.globus.cog.abstraction.impl.fileTransfer.CachingDelegatedFileTransferHandler.doDestination(CachingDelegatedFileTransferHandler.java:46)
at org.globus.cog.abstraction.impl.fileTransfer.DelegatedFileTransferHandler.run(DelegatedFileTransferHandler.java:487)
at java.lang.Thread.run(Thread.java:662)
Failed to write to montage-20110613-2124-ktnceob8/info/l on pads. Verify that all directories specified in your sites file exist and are writable!
Failed to write to montage-20110613-2124-ktnceob8/info/p on pads. Verify that all directories specified in your sites file exist and are writable!
Failed to write to montage-20110613-2124-ktnceob8/info/u on pads. Verify that all directories specified in your sites file exist and are writable!
Failed to write to montage-20110613-2124-ktnceob8/info/s on pads. Verify that all directories specified in your sites file exist and are writable!
Failed to write to montage-20110613-2124-ktnceob8/info/r on pads. Verify that all directories specified in your sites file exist and are writable!
Failed to write to montage-20110613-2124-ktnceob8/info/n on pads. Verify that all directories specified in your sites file exist and are writable!
Failed to write to montage-20110613-2124-ktnceob8/info/o on pads. Verify that all directories specified in your sites file exist and are writable!
Failed to write to montage-20110613-2124-ktnceob8/info/m on pads. Verify that all directories specified in your sites file exist and are writable!
Failed to write to montage-20110613-2124-ktnceob8/info/t on pads. Verify that all directories specified in your sites file exist and are writable!
all files used for this run are in ~jonmon/PADS/Swift/Montage/m101_tutorial/run.0004
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