[Swift-devel] Exception whilst logging dataset

[Mihael Hategan]

Yep. I can reproduce this.

In the mean time, if you need to run stuff, disable provenance logging
in swift.properties.

On Mon, 2011-08-08 at 22:04 -0500, Ketan Maheshwari wrote:
> Hi,
> 
> 
> Testing 0.93 on Beagle, I am seeing this exception for modftdock
> script:
> 
> 
> Exception whilst logging dataset content for ?:string = 100 - Closed
> java.lang.NullPointerException
> at
> org.griphyn.vdl.mapping.RootDataNode.getMapper(RootDataNode.java:213)
> at
> org.griphyn.vdl.mapping.AbstractDataNode.logContent(AbstractDataNode.java:460)
> at
> org.griphyn.vdl.mapping.AbstractDataNode.closeShallow(AbstractDataNode.java:422)
> at
> org.griphyn.vdl.mapping.AbstractDataNode.setValue(AbstractDataNode.java:361)
> at
> org.griphyn.vdl.mapping.RootDataNode.setValue(RootDataNode.java:221)
> at org.griphyn.vdl.mapping.RootDataNode.newNode(RootDataNode.java:27)
> at
> org.griphyn.vdl.karajan.lib.swiftscript.FnArg.function(FnArg.java:71)
> at
> org.globus.cog.karajan.workflow.nodes.functions.AbstractFunction.post(AbstractFunction.java:27)
> at
> org.globus.cog.karajan.workflow.nodes.AbstractSequentialWithArguments.completed(AbstractSequentialWithArguments.java:194)
> at
> org.globus.cog.karajan.workflow.nodes.FlowNode.complete(FlowNode.java:214)
> at
> org.globus.cog.karajan.workflow.nodes.FlowContainer.post(FlowContainer.java:58)
> at
> org.globus.cog.karajan.workflow.nodes.functions.AbstractFunction.post(AbstractFunction.java:28)
> at
> org.globus.cog.karajan.workflow.nodes.Sequential.startNext(Sequential.java:29)
> at
> org.globus.cog.karajan.workflow.nodes.Sequential.executeChildren(Sequential.java:20)
> at
> org.globus.cog.karajan.workflow.nodes.FlowContainer.execute(FlowContainer.java:63)
> at
> org.globus.cog.karajan.workflow.nodes.FlowNode.restart(FlowNode.java:139)
> at
> org.globus.cog.karajan.workflow.nodes.FlowNode.start(FlowNode.java:197)
> at
> org.globus.cog.karajan.workflow.FlowElementWrapper.start(FlowElementWrapper.java:227)
> at
> org.globus.cog.karajan.workflow.events.EventBus.start(EventBus.java:104)
> at
> org.globus.cog.karajan.workflow.events.EventTargetPair.run(EventTargetPair.java:40)
> at java.util.concurrent.Executors
> $RunnableAdapter.call(Executors.java:452)
> at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:309)
> at java.util.concurrent.FutureTask.run(FutureTask.java:149)
> at java.util.concurrent.ThreadPoolExecutor
> $Worker.runTask(ThreadPoolExecutor.java:897)
> at java.util.concurrent.ThreadPoolExecutor
> $Worker.run(ThreadPoolExecutor.java:919)
> at java.lang.Thread.run(Thread.java:736)
> 
> 
> For all the variables in the script.
> 
> 
> The script runs to completion however.
> 
> 
> ftdock.swift attached.
> 
> 
> I tried to comment out the trace and converting the int variable
> "mod_index" to string but the exception persisted.
> 
> -- 
> Ketan
> 
> 
> 
> _______________________________________________
> Swift-devel mailing list
> Swift-devel at ci.uchicago.edu
> https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-devel