[Swift-devel] Problems with coasters and managedfork jobmanager

Michael Wilde wilde at mcs.anl.gov
Tue Feb 10 11:20:19 CST 2009


Was it not possible and/or easy to let GRAM stage in bootstrap.sh as a 
stdin file to /bin/bash, the equivalent of:

com$ globus-job-run tp-osg.uchicago.edu -stdin -s longscript.sh /bin/sh
hello
world
com$

- Mike

On 2/9/09 6:16 PM, Mihael Hategan wrote:
> I did get a one-liner perl which contains an encoded bootstrap jar file
> (only printable characters). Perl cares less about whitespace, which
> makes me think it's a better candidate if we want to go that way.
> 
> Thoughts?
> 
> On Mon, 2009-02-09 at 17:05 -0600, Michael Wilde wrote:
>> No, correction, I mis-spoke.  When I try this direct to the shell (as 
>> opposed to via swift and coaster bootstrap) I get the same error as you 
>> show. I cant get sh to accept function defs on 1 line.
>>
>> So I must have mis-interpreted my result from last Friday.
>>
>> - Mike
>>
>>
>> On 2/9/09 4:06 PM, Michael Wilde wrote:
>>> sorry, i think i put the wrong version there; i dealt with that specific 
>>> problem and hit a subtler one, deeper in the bootstrap process.
>>>
>>> On 2/9/09 2:34 PM, Mihael Hategan wrote:
>>>> I asked because I couldn't figure out how to get it to work.
>>>>
>>>> But it seems like yours has problems, too:
>>>> mike at blabla tmp$ sh bootstrap.nonl.sh
>>>> bootstrap.nonl.sh: line 1: syntax error near unexpected token `;'
>>>> ...
>>>>
>>>> On Mon, 2009-02-09 at 14:23 -0600, Michael Wilde wrote:
>>>>> its www.ci.uchicago.edu/~wilde/bootstrap.nonl.sh, plus I removed the 
>>>>> code in ServiceManager that inserted the extra newlines when reading 
>>>>> it into a string buffer. I checked as far as verifying in the gram 
>>>>> log that it was seen by gram as a single line in the rsl.  I never 
>>>>> got a successful run from it, though - it ran into other problems later.
>>>>>
>>>>> On 2/9/09 1:46 PM, Mihael Hategan wrote:
>>>>>> On Fri, 2009-02-06 at 10:33 -0600, Michael Wilde wrote:
>>>>>>> I dont know, but I am testing a version where I removed the 
>>>>>>> newlines from bootstrap.pl (and adjusted a few bits manually)
>>>>>> May we see that?
>>>>>>
>>>>>>>  and I *think* its moving on to the next stage and trying to start 
>>>>>>> the workers.
>>>>>>>
>>>>>>> Ben, it seems that *some* whitespace is passed on OK, in that I can 
>>>>>>> run a job that does echo "hello world" and that blank after hello 
>>>>>>> is preserved, and the job runs. I assume the whitespace problem is 
>>>>>>> more subtle than that?
>>>>>>>
>>>>>>> On 2/6/09 10:24 AM, Mihael Hategan wrote:
>>>>>>>> On Fri, 2009-02-06 at 16:17 +0000, Ben Clifford wrote:
>>>>>>>>> On Fri, 6 Feb 2009, Mihael Hategan wrote:
>>>>>>>>>
>>>>>>>>>> I guess we'll have to stage in the bootstrap script using the 
>>>>>>>>>> stage-in
>>>>>>>>>> directive if we are to support managed fork, since I don't see OSG
>>>>>>>>>> fixing the issue.
>>>>>>>>> They are fixing the whitespace in parameters - see the gram-user 
>>>>>>>>> thread I sent in a different message.
>>>>>>>> Does this include the new lines?
>>>>>>>>
>>> _______________________________________________
>>> Swift-devel mailing list
>>> Swift-devel at ci.uchicago.edu
>>> http://mail.ci.uchicago.edu/mailman/listinfo/swift-devel
> 



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