[Swift-devel] Strange Problem with TG-UCANL
Andrew Robert Jamieson
andrewj at uchicago.edu
Thu Oct 25 13:07:15 CDT 2007
I was just looking at some of the swift.properties configurations. If I
understand it correctly I think this can be set as such. Perhaps I will
try.
Thanks,
Andrew
On Thu, 25 Oct 2007, Ian Foster wrote:
> can we decide that we always use kickstart?
>
> Andrew Robert Jamieson wrote:
>> Thanks for the suggestion, unfortunately I am not using kickstart.
>>
>> On Thu, 25 Oct 2007, Veronika Nefedova wrote:
>>
>>> If you are using kickstart - try to use this setting (on TG-UC):
>>> gridlaunch="/home/nefedova/pegasus/src/tools/kickstart/kickstart" in your
>>> site.xml. file ( replace the one you have with this one)
>>>
>>> Nika
>>>
>>> On Oct 25, 2007, at 10:50 AM, Andrew Robert Jamieson wrote:
>>>
>>>> Any thoughts on why this would happen on a simple "hello world"
>>>> (see below)
>>>> Thanks,
>>>> Andrew
>>>>
>>>>
>>>> ********************
>>>> andrewj at tg-viz-login1:~/CADGrid/Swifty/vdsk-0.3-dev/examples/vdsk> swift
>>>> -debug -tc.file ~/CADGrid/Swifty/UCANL-tc.data -sites.file
>>>> ~/.swift/sites.xml first.swift
>>>> Recompilation suppressed.
>>>> Using sites /home/andrewj/.swift/sites.xml
>>>> Using tc.data: /home/andrewj/CADGrid/Swifty/UCANL-tc.data
>>>> Swift v0.3-dev r1339
>>>>
>>>> Swift v0.3-dev r1339
>>>>
>>>> RunID: 20071025-1044-zo4kzfjg
>>>> RunID: 20071025-1044-zo4kzfjg
>>>> echo started
>>>> START thread=0 tr=echo
>>>> START host=UCANL - Initializing shared directory
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080146) setting status to
>>>> Active
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080146) setting status to
>>>> Completed
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1193327080149) setting status to
>>>> Submitted
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1193327080149) setting status to
>>>> Active
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1193327080149) setting status to
>>>> Completed
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1193327080153) setting status to
>>>> Submitted
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1193327080153) setting status to
>>>> Active
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1193327080153) setting status to
>>>> Completed
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080156) setting status to
>>>> Active
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080156) setting status to
>>>> Completed
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080158) setting status to
>>>> Active
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080158) setting status to
>>>> Completed
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080160) setting status to
>>>> Active
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080160) setting status to
>>>> Completed
>>>> END host=UCANL - Done initializing shared directory
>>>> THREAD_ASSOCIATION jobid=echo-0gj1k5ji thread=0 host=UCANL
>>>> START jobid=echo-0gj1k5ji host=UCANL - Initializing directory structure
>>>> START path= dir=first-20071025-1044-zo4kzfjg/shared - Creating directory
>>>> structure
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080162) setting status to
>>>> Active
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080162) setting status to
>>>> Completed
>>>> END jobid=echo-0gj1k5ji - Done initializing directory structure
>>>> START jobid=echo-0gj1k5ji - Staging in files
>>>> END jobid=echo-0gj1k5ji - Staging in finished
>>>> JOB_START jobid=echo-0gj1k5ji tr=echo arguments=[Hello, world!]
>>>> tmpdir=first-20071025-1044-zo4kzfjg/echo-0gj1k5ji host=UCANL
>>>> Task(type=JOB_SUBMISSION, identity=urn:0-1193327080164) setting status to
>>>> Submitted
>>>> Task(type=JOB_SUBMISSION, identity=urn:0-1193327080164) setting status to
>>>> Active
>>>> Task(type=JOB_SUBMISSION, identity=urn:0-1193327080164) setting status to
>>>> Completed
>>>> START jobid=echo-0gj1k5ji
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080166) setting status to
>>>> Active
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080166) setting status to
>>>> Failed org.globus.cog.abstraction.impl.file.FileResourceException: Cannot
>>>> delete /disks/scratchgpfs1/andrewj/first-20071025-1044-zo4kzfjg/
>>>> status/echo-0gj1k5ji-success
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080168) setting status to
>>>> Active
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080168) setting status to
>>>> Completed
>>>> NO_STATUS_FILE jobid=echo-0gj1k5ji - Both status files are missing
>>>> APPLICATION_EXCEPTION jobid=echo-0gj1k5ji - Application exception: No
>>>> status file was found. Check the shared filesystem on UCANL
>>>> sys:throw @ vdl-int.k, line: 96
>>>> sys:else @ vdl-int.k, line: 94
>>>> sys:if @ vdl-int.k, line: 82
>>>> sys:try @ vdl-int.k, line: 70
>>>> vdl:checkjobstatus @ vdl-int.k, line: 379
>>>> sys:sequential @ vdl-int.k, line: 355
>>>> sys:try @ vdl-int.k, line: 354
>>>> task:allocatehost @ vdl-int.k, line: 336
>>>> vdl:execute2 @ execute-default.k, line: 23
>>>> sys:restartonerror @ execute-default.k, line: 21
>>>> sys:sequential @ execute-default.k, line: 19
>>>> sys:try @ execute-default.k, line: 18
>>>> sys:if @ execute-default.k, line: 17
>>>> sys:then @ execute-default.k, line: 16
>>>> sys:if @ execute-default.k, line: 15
>>>> vdl:execute @ first.kml, line: 16
>>>> greeting @ first.kml, line: 43
>>>> vdl:mainp @ first.kml, line: 42
>>>> mainp @ vdl.k, line: 148
>>>> vdl:mains @ first.kml, line: 41
>>>> vdl:mains @ first.kml, line: 41
>>>> rlog:restartlog @ first.kml, line: 39
>>>> kernel:project @ first.kml, line: 2
>>>> first-20071025-1044-zo4kzfjg
>>>>
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1193327080170) setting status to
>>>> Submitted
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1193327080170) setting status to
>>>> Active
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1193327080170) setting status to
>>>> Failed Exception in getFile
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080173) setting status to
>>>> Active
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080173) setting status to
>>>> Completed
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1193327080176) setting status to
>>>> Submitted
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1193327080176) setting status to
>>>> Active
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1193327080176) setting status to
>>>> Failed Exception in getFile
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080179) setting status to
>>>> Active
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080179) setting status to
>>>> Completed
>>>> THREAD_ASSOCIATION jobid=echo-1gj1k5ji thread=0 host=UCANL
>>>> START jobid=echo-1gj1k5ji host=UCANL - Initializing directory structure
>>>> END jobid=echo-1gj1k5ji - Done initializing directory structure
>>>> START jobid=echo-1gj1k5ji - Staging in files
>>>> END jobid=echo-1gj1k5ji - Staging in finished
>>>> JOB_START jobid=echo-1gj1k5ji tr=echo arguments=[Hello, world!]
>>>> tmpdir=first-20071025-1044-zo4kzfjg/echo-1gj1k5ji host=UCANL
>>>> Task(type=JOB_SUBMISSION, identity=urn:0-1193327080183) setting status to
>>>> Submitted
>>>> Task(type=JOB_SUBMISSION, identity=urn:0-1193327080183) setting status to
>>>> Active
>>>> Task(type=JOB_SUBMISSION, identity=urn:0-1193327080183) setting status to
>>>> Completed
>>>> START jobid=echo-1gj1k5ji
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080185) setting status to
>>>> Active
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080185) setting status to
>>>> Failed org.globus.cog.abstraction.impl.file.FileResourceException: Cannot
>>>> delete /disks/scratchgpfs1/andrewj/first-20071025-1044-zo4kzfjg/
>>>> status/echo-1gj1k5ji-success
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080187) setting status to
>>>> Active
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080187) setting status to
>>>> Completed
>>>> NO_STATUS_FILE jobid=echo-1gj1k5ji - Both status files are missing
>>>> APPLICATION_EXCEPTION jobid=echo-1gj1k5ji - Application exception: No
>>>> status file was found. Check the shared filesystem on UCANL
>>>> sys:throw @ vdl-int.k, line: 96
>>>> sys:else @ vdl-int.k, line: 94
>>>> sys:if @ vdl-int.k, line: 82
>>>> sys:try @ vdl-int.k, line: 70
>>>> vdl:checkjobstatus @ vdl-int.k, line: 379
>>>> sys:sequential @ vdl-int.k, line: 355
>>>> sys:try @ vdl-int.k, line: 354
>>>> task:allocatehost @ vdl-int.k, line: 336
>>>> vdl:execute2 @ execute-default.k, line: 23
>>>> sys:restartonerror @ execute-default.k, line: 21
>>>> sys:sequential @ execute-default.k, line: 19
>>>> sys:try @ execute-default.k, line: 18
>>>> sys:if @ execute-default.k, line: 17
>>>> sys:then @ execute-default.k, line: 16
>>>> sys:if @ execute-default.k, line: 15
>>>> vdl:execute @ first.kml, line: 16
>>>> greeting @ first.kml, line: 43
>>>> vdl:mainp @ first.kml, line: 42
>>>> mainp @ vdl.k, line: 148
>>>> vdl:mains @ first.kml, line: 41
>>>> vdl:mains @ first.kml, line: 41
>>>> rlog:restartlog @ first.kml, line: 39
>>>> kernel:project @ first.kml, line: 2
>>>> first-20071025-1044-zo4kzfjg
>>>>
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1193327080189) setting status to
>>>> Submitted
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1193327080189) setting status to
>>>> Active
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1193327080189) setting status to
>>>> Failed Exception in getFile
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080192) setting status to
>>>> Active
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080192) setting status to
>>>> Completed
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1193327080195) setting status to
>>>> Submitted
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1193327080195) setting status to
>>>> Active
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1193327080195) setting status to
>>>> Failed Exception in getFile
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080198) setting status to
>>>> Active
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080198) setting status to
>>>> Completed
>>>> THREAD_ASSOCIATION jobid=echo-2gj1k5ji thread=0 host=UCANL
>>>> START jobid=echo-2gj1k5ji host=UCANL - Initializing directory structure
>>>> END jobid=echo-2gj1k5ji - Done initializing directory structure
>>>> START jobid=echo-2gj1k5ji - Staging in files
>>>> END jobid=echo-2gj1k5ji - Staging in finished
>>>> JOB_START jobid=echo-2gj1k5ji tr=echo arguments=[Hello, world!]
>>>> tmpdir=first-20071025-1044-zo4kzfjg/echo-2gj1k5ji host=UCANL
>>>> Task(type=JOB_SUBMISSION, identity=urn:0-1193327080202) setting status to
>>>> Submitted
>>>> Task(type=JOB_SUBMISSION, identity=urn:0-1193327080202) setting status to
>>>> Active
>>>> Task(type=JOB_SUBMISSION, identity=urn:0-1193327080202) setting status to
>>>> Completed
>>>> START jobid=echo-2gj1k5ji
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080204) setting status to
>>>> Active
>>>> Task(type=FILE_OPERATION, identity=urn:0-1193327080204) setting status to
>>>> Completed
>>>> SUCCESS jobid=echo-2gj1k5ji - Success file found
>>>> JOB_END jobid=echo-2gj1k5ji
>>>> START jobid=echo-2gj1k5ji - Staging out files
>>>> FILE_STAGE_OUT_START srcname=hello.txt srcdir=first-20071025-1044-
>>>> zo4kzfjg/shared/ srchost=UCANL destdir= desthost=localhost provider=file
>>>> Task(type=FILE_OPERATION, identity=urn:0-1-1193327080206) setting status
>>>> to Active
>>>> Task(type=FILE_OPERATION, identity=urn:0-1-1193327080206) setting status
>>>> to Completed
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1-1193327080209) setting status
>>>> to Submitted
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1-1193327080209) setting status
>>>> to Active
>>>> Task(type=FILE_TRANSFER, identity=urn:0-1-1193327080209) setting status
>>>> to Completed
>>>> FILE_STAGE_OUT_END srcname=hello.txt srcdir=first-20071025-1044-
>>>> zo4kzfjg/shared/ srchost=UCANL destdir= desthost=localhost provider=file
>>>> Task(type=FILE_OPERATION, identity=urn:0-1-1193327080213) setting status
>>>> to Active
>>>> Task(type=FILE_OPERATION, identity=urn:0-1-1193327080213) setting status
>>>> to Completed
>>>> END jobid=echo-2gj1k5ji - Staging out finished
>>>> echo completed
>>>> END_SUCCESS thread=0 tr=echo
>>>> START cleanups=[[first-20071025-1044-zo4kzfjg, UCANL]]
>>>> START dir=first-20071025-1044-zo4kzfjg host=UCANL
>>>> Task(type=JOB_SUBMISSION, identity=urn:0-1-1193327080216) setting status
>>>> to Submitted
>>>> Task(type=JOB_SUBMISSION, identity=urn:0-1-1193327080216) setting status
>>>> to Completed
>>>> END dir=first-20071025-1044-zo4kzfjg host=UCANL
>>>> Swift finished - workflow had no errors
>>>>
>>>> _______________________________________________
>>>> Swift-devel mailing list
>>>> Swift-devel at ci.uchicago.edu
>>>> http://mail.ci.uchicago.edu/mailman/listinfo/swift-devel
>>>>
>>>
>>>
>> _______________________________________________
>> Swift-devel mailing list
>> Swift-devel at ci.uchicago.edu
>> http://mail.ci.uchicago.edu/mailman/listinfo/swift-devel
>>
>
> --
>
> Ian Foster, Director, Computation Institute
> Argonne National Laboratory & University of Chicago
> Argonne: MCS/221, 9700 S. Cass Ave, Argonne, IL 60439
> Chicago: Rm 405, 5640 S. Ellis Ave, Chicago, IL 60637
> Tel: +1 630 252 4619. Web: www.ci.uchicago.edu.
> Globus Alliance: www.globus.org.
>
>
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