[Swift-devel] Re: angle-1000 second run
Ben Clifford
benc at hawaga.org.uk
Tue Nov 6 12:20:07 CST 2007
hitting the transfer throttle a lot according to this:
http://www.ci.uchicago.edu/~benc/log-processing/report-awf6-20071106-1101-yxipkgyg/
On Tue, 6 Nov 2007, Michael Wilde wrote:
> It seems that the cluster problem is also due to the slow speed of input data
> file stage-in.
>
> It took 6 minutes to stage in 60 40MB input files to uc-tg
> (this is to NFS; I will try GPFS as well).
>
> So at 10 files per minute, if we check the cluster queue every 30 seconds,
> that about 5 jobs per cluster on average, which explains what we're seeing.
>
> 10 fpm = 400MB/min = 6.5MB/sec. Note that Im submitting from the login node
> to the same cluster - seems very slow.
>
> I will test further and try to calibrate the expected speeds on a big file.
>
> - Mike
>
>
> On 11/6/07 10:19 AM, Michael Wilde wrote:
> >
> > > > 3. The cluster sizes were extremely small about 4 - should have been
> > > > 10-20 by
> > > > my calcs.
> > >
> > > Increase the cluster queue delay parameter from 4 to about 30 (seconds).
> > > This will make Swift wait much longer before putting clusters together,
> > > which may allow more jobs to build up in the clustering queue.
> >
> > Previous run had this set to 10 seconds. The logs confirm that this was the
> > clustering period: the cluster size=4 message came out every 10 seconds.
> >
> > > Make sure that you havethe cluster maximum time and maxwalltimes for jobs
> > > set to sensible values, because large clusters will highlight
> > > misconfigurations there. In particular, note that the maximum cluster time
> > > in the config file needs to be (less than) half of the maxwalltime
> > > permitted for the site you submit to (so if you are allowewd to run 15
> > > minute jobs, set the cluster maximum time to 7*60, for example).
> >
> > I set cluster max time to 1200 with a maxwalltime of 60 seconds.
> >
> > I will fiddle with this part with smaller runs till it works.
> >
> > Likely I have a config issue somewhere, or theres a bug.
> >
> > > Are you using the PBS provider or GRAM to submit?
> >
> > GRAM, gt2.
> >
>
>
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