[Swift-commit] r7507 - in SwiftApps/swift-galaxy: . swift swift/lungsearch
ketan at ci.uchicago.edu
ketan at ci.uchicago.edu
Fri Jan 24 10:34:22 CST 2014
Author: ketan
Date: 2014-01-24 10:34:22 -0600 (Fri, 24 Jan 2014)
New Revision: 7507
Added:
SwiftApps/swift-galaxy/README
SwiftApps/swift-galaxy/swift/
SwiftApps/swift-galaxy/swift/2stage.xml
SwiftApps/swift-galaxy/swift/Illinois.tgz
SwiftApps/swift-galaxy/swift/catsn.swift
SwiftApps/swift-galaxy/swift/catsn.xml
SwiftApps/swift-galaxy/swift/cf
SwiftApps/swift-galaxy/swift/data.txt
SwiftApps/swift-galaxy/swift/datlist.txt
SwiftApps/swift-galaxy/swift/delog
SwiftApps/swift-galaxy/swift/dogftp.sh
SwiftApps/swift-galaxy/swift/dssat.xml
SwiftApps/swift-galaxy/swift/edrevised.mod
SwiftApps/swift-galaxy/swift/face-it/
SwiftApps/swift-galaxy/swift/gftplist.swift
SwiftApps/swift-galaxy/swift/lungsearch/
SwiftApps/swift-galaxy/swift/lungsearch/Consortium_expr_full_pheno_no_affx.csv
SwiftApps/swift-galaxy/swift/lungsearch/HG-U133A_2.na33.annot.csv
SwiftApps/swift-galaxy/swift/lungsearch/egsearch.swift
SwiftApps/swift-galaxy/swift/lungsearch/exsearch.py
SwiftApps/swift-galaxy/swift/lungsearch/lungsearch.xml
SwiftApps/swift-galaxy/swift/lungsearch/midway.cdm
SwiftApps/swift-galaxy/swift/lungsearch/midway.cf
SwiftApps/swift-galaxy/swift/lungsearch/midway.xml
SwiftApps/swift-galaxy/swift/lungsearch/swift-lungsearch
SwiftApps/swift-galaxy/swift/lungsearch/tc.data
SwiftApps/swift-galaxy/swift/lungsearch/wrapper.sh
SwiftApps/swift-galaxy/swift/mysim.xml
SwiftApps/swift-galaxy/swift/plotswiftlogs
SwiftApps/swift-galaxy/swift/powergrid.xml
SwiftApps/swift-galaxy/swift/print_results_revised.inc
SwiftApps/swift-galaxy/swift/set_data_ascii.inc
SwiftApps/swift-galaxy/swift/sites.xml
SwiftApps/swift-galaxy/swift/statswift.xml
SwiftApps/swift-galaxy/swift/stochmodel.run
SwiftApps/swift-galaxy/swift/swift-2stage
SwiftApps/swift-galaxy/swift/swift-3stage
SwiftApps/swift-galaxy/swift/swift-catsn
SwiftApps/swift-galaxy/swift/swift-galaxy
SwiftApps/swift-galaxy/swift/swift-mysim
SwiftApps/swift-galaxy/swift/swift-powergrid
SwiftApps/swift-galaxy/swift/swift-stats
SwiftApps/swift-galaxy/swift/swift-try
SwiftApps/swift-galaxy/swift/swift.xml
SwiftApps/swift-galaxy/swift/tc
SwiftApps/swift-galaxy/swift/tmp.out
SwiftApps/swift-galaxy/swift/try.xml
SwiftApps/swift-galaxy/swift/wind_data.dat
Log:
Swift galaxy directory
Added: SwiftApps/swift-galaxy/README
===================================================================
--- SwiftApps/swift-galaxy/README (rev 0)
+++ SwiftApps/swift-galaxy/README 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,7 @@
+=How to install this into Galaxy=
+
+=Notes=
+
+1. Untar Illinois.tgz before running powergrid application
+2. The csvs in the lungsearch application are not complete, they contain just the first 50 lines
+
Added: SwiftApps/swift-galaxy/swift/2stage.xml
===================================================================
--- SwiftApps/swift-galaxy/swift/2stage.xml (rev 0)
+++ SwiftApps/swift-galaxy/swift/2stage.xml 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,23 @@
+<tool id="2stage" name="A Swift 2 stage workflow">
+ <description>A 2 stage Swift workflow</description>
+
+ <command interpreter="bash">
+ swift-2stage "$site" "$data" "$n" "$html_file.files_path" "$log_file" "$html_file"
+ </command>
+
+ <inputs>
+ <param name="site" type="select" label="Execution Location">
+ <option value="localhost">Localhost</option>
+ <option value="midway">Midway</option>
+ <option value="uc3">UC3</option>
+ <option value="stampede">Stampede</option>
+ </param>
+ <param name="n" type="text" value="1" label="Number of jobs to run (tested ranges 1 - 1000)"/>
+ <param name="data" type="data" label="Input data file"/>
+ <!--<param name="outdir" type="text" value="/tmp/outdir" label="Directory to put output data into"/>-->
+ </inputs>
+ <outputs>
+ <data format="txt" name="log_file" type="data" label="Swift output" />
+ <data format="html" name="html_file" label="2stageoutput.html" />
+ </outputs>
+</tool>
Added: SwiftApps/swift-galaxy/swift/Illinois.tgz
===================================================================
(Binary files differ)
Property changes on: SwiftApps/swift-galaxy/swift/Illinois.tgz
___________________________________________________________________
Added: svn:mime-type
+ application/octet-stream
Added: SwiftApps/swift-galaxy/swift/catsn.swift
===================================================================
--- SwiftApps/swift-galaxy/swift/catsn.swift (rev 0)
+++ SwiftApps/swift-galaxy/swift/catsn.swift 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,11 @@
+type file;
+
+app (file o) cat (file i) {
+ cat @i stdout=@o;
+}
+file out[]<simple_mapper; location="outdir", prefix="f.",suffix=".out">;
+
+foreach j in [1:1000] {
+ file data<single_file_mapper; file="data.txt">;
+ out[j] = cat(data);
+}
Added: SwiftApps/swift-galaxy/swift/catsn.xml
===================================================================
--- SwiftApps/swift-galaxy/swift/catsn.xml (rev 0)
+++ SwiftApps/swift-galaxy/swift/catsn.xml 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,22 @@
+<tool id="catsn" name="Swift catsn">
+ <description>A Swift tool to run the catsn workflow</description>
+
+ <command interpreter="bash">
+ swift-catsn "$site" "$data" "$n" "$html_file.files_path" "$log_file" "$html_file"
+ </command>
+
+ <inputs>
+ <param name="site" type="select" label="Execution Location">
+ <option value="localhost">Localhost</option>
+ <option value="midway">Midway</option>
+ <option value="uc3">UC3</option>
+ <option value="stampede">Stampede</option>
+ </param>
+ <param name="n" type="text" value="1" label="Number of tasks to run "/>
+ <param name="data" type="data" label="Input data file"/>
+ </inputs>
+ <outputs>
+ <data format="txt" name="log_file" type="data" label="Swift output" />
+ <data format="html" name="html_file" label="catsnoutput.html" />
+ </outputs>
+</tool>
Added: SwiftApps/swift-galaxy/swift/cf
===================================================================
--- SwiftApps/swift-galaxy/swift/cf (rev 0)
+++ SwiftApps/swift-galaxy/swift/cf 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,7 @@
+use.provider.staging=false
+wrapperlog.always.transfer=true
+execution.retries=0
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+use.wrapper.staging=false
Added: SwiftApps/swift-galaxy/swift/data.txt
===================================================================
--- SwiftApps/swift-galaxy/swift/data.txt (rev 0)
+++ SwiftApps/swift-galaxy/swift/data.txt 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,7508 @@
+2013-08-27 01:13:50,544+0000 DEBUG Loader setting: sites.file to: /tmp/sites.xml
+2013-08-27 01:13:50,546+0000 DEBUG Loader setting: tc.file to: /tmp/tc
+2013-08-27 01:13:50,546+0000 INFO Loader VERSION Swift trunk swift-r7005 cog-r3767
+2013-08-27 01:13:50,546+0000 INFO Loader RUN_ID 20130827-0113-r1k3cjmc
+2013-08-27 01:13:50,547+0000 INFO Loader ARGUMENTS [-sites.file, /tmp/sites.xml, -tc.file, /tmp/tc, -config, /tmp/cf, /tmp/inference4galaxy.swift, -batch=20]
+2013-08-27 01:13:50,547+0000 INFO Loader MAX_HEAP 954466304
+2013-08-27 01:13:50,547+0000 INFO Loader GLOBUS_HOSTNAME swift.rcc.uchicago.edu
+2013-08-27 01:13:50,547+0000 INFO Loader CWD /scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/.
+2013-08-27 01:13:50,547+0000 DEBUG Loader SWIFT_CONFIGURATION Swift configuration ([/tmp/cf]): {throttle.score.job.factor=4, throttle.file.operations=8, throttle.host.submit=2, pgraph.node.options=color="seagreen", style="filled", wrapper.parameter.mode=args, provenance.log=false, throttle.submit=4, ticker.prefix=Progress: time:, provider.staging.pin.swiftfiles=false, clustering.enabled=false, replication.min.queue.time=60, sites.file=/tmp/sites.xml, cdm.broadcast.mode=file, kickstart.enabled=maybe, wrapperlog.always.transfer=true, caching.algorithm=LRU, use.provider.staging=true, use.wrapper.staging=true, status.mode=files, clustering.min.time=60, ticker.date.format=, kickstart.always.transfer=false, file.gc.enabled=true, throttle.transfers=4, execution.retries=1, sitedir.keep=true, pgraph.graph.options=splines="compound", rankdir="TB", replication.enabled=false, clustering.queue.delay=4, pgraph=false, mapping.checker=on, wrapper.invocation.mode=absolute, tc.file=/tmp/tc,
replication.limit=3, lazy.errors=false}
+2013-08-27 01:13:50,547+0000 INFO Loader SITES_FILE /tmp/sites.xml
+2013-08-27 01:13:50,548+0000 DEBUG textfiles BEGIN SITES:
+<config>
+ <pool handle="midway">
+ <execution provider="coaster" jobmanager="local:slurm"/>
+ <profile namespace="globus" key="queue">sandyb</profile>
+ <profile namespace="globus" key="jobsPerNode">16</profile>
+ <profile namespace="globus" key="maxWalltime">02:00:00</profile>
+ <profile namespace="globus" key="maxTime">7500</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">2</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="karajan" key="jobThrottle">.31</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <workdirectory>/tmp/swift.work</workdirectory>
+ </pool>
+</config>
+
+
+2013-08-27 01:13:50,548+0000 DEBUG textfiles END SITES:
+2013-08-27 01:13:50,548+0000 INFO Loader TC_FILE /tmp/tc
+2013-08-27 01:13:50,548+0000 DEBUG textfiles BEGIN TC:
+midway echo echo
+midway cat cat
+midway gensample /home/maheshwari/powergridapps/bin/gensample.py
+midway runampl /home/maheshwari/powergridapps/bin/run_ampl.py
+midway runampl_l /home/maheshwari/powergridapps/bin/run_ampl_l.py
+midway runampl_u /home/maheshwari/powergridapps/bin/run_ampl_u.py
+
+
+2013-08-27 01:13:50,548+0000 DEBUG textfiles END TC:
+2013-08-27 01:13:50,549+0000 DEBUG textfiles BEGIN SWIFTSCRIPT:
+type file;
+
+app ( file _obj_out, file _xhat_out1, file _xhat_out2, file _ampl_res, file _out)
+ ampl_app ( int _s,
+ int _fix_x,
+ file _stoch_model,
+ file _illinois,
+ file _edrevised_model,
+ file _ascii_data,
+ file _print_results,
+ file _wind_data
+ ) {
+ runampl _s _fix_x @_stoch_model @_xhat_out1 @_xhat_out2 @_obj_out @_illinois @_edrevised_model @_ascii_data @_print_results @_ampl_res @_wind_data stdout=@_out;
+}
+
+app (file _obj_out, file _ampl_l_res, file _out) ampl_app_L (
+ int _s,
+ int _fix_x,
+ file _stoch_model,
+ file _illinois,
+ file _edrevised_model,
+ file _ascii_data,
+ file _print_results
+ ) {
+
+ runampl_l _s _fix_x @_stoch_model @_obj_out @_illinois @_edrevised_model @_ascii_data @_print_results @_ampl_l_res stdout=@_out;
+}
+
+app (file _obj_out, file _ampl_u_res, file _out) ampl_app_U (
+ int _s,
+ int _fix_x,
+ file _stoch_model,
+ file _xhat,
+ file _illinois,
+ file _edrevised_model,
+ file _ascii_data,
+ file _print_results,
+ file _wind_data
+ ) {
+
+ runampl_u _s _fix_x @_stoch_model @_xhat @_obj_out @_illinois @_edrevised_model @_ascii_data @_print_results @_ampl_u_res @_wind_data stdout=@_out;
+}
+
+file stoch_model<"/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run">;
+file edrevised_model<"/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod">;
+file ascii_data<"/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc">;
+file print_results<"/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc">;
+file illinois<"/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz">;
+file wind_data<"/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat">;
+
+file out[] <simple_mapper; location="outdir", prefix="ampl",suffix=".out">;
+file obj_out[] <simple_mapper; location="obj_outdir", prefix="obj_ampl",suffix=".out">;
+file ampl_res[] <simple_mapper; location="Results", prefix="ampl_res",suffix=".out">;
+
+file xhat_out1[] <simple_mapper; location="outdir", prefix="xhat1",suffix=".out">;
+file xhat_out2[] <simple_mapper; location="outdir", prefix="xhat2",suffix=".out">;
+
+file out_l[][][] <simple_mapper; location="outdir", prefix="out_l", suffix=".out">;
+file obj_out_l[][][] <simple_mapper; location="obj_outdir", prefix="obj_out_l", suffix=".out">;
+file ampl_l_res[][][] <simple_mapper; location="Results", prefix="ampl_res_l", suffix=".out">;
+file xhat_out_l1[][][] <simple_mapper; location="outdir", prefix="xhat_l1",suffix=".out">;
+file xhat_out_l2[][][] <simple_mapper; location="outdir", prefix="xhat_l2",suffix=".out">;
+
+file out_u[][][] <simple_mapper; location="outdir", prefix="out_u", suffix=".out">;
+file obj_out_u[][][] <simple_mapper; location="obj_outdir", prefix="obj_out_u", suffix=".out">;
+file ampl_u_res[][][] <simple_mapper; location="Results", prefix="ampl_res_u", suffix=".out">;
+#file upper_out[][][] <simple_mapper; location="outdir", prefix="upper",suffix=".out">;
+#file lower_out[][][] <simple_mapper; location="outdir", prefix="lower",suffix=".out">;
+
+int nS[] = [10]; //number of scenario sweeps
+int Batch = @toInt(@arg("batch", "20"));
+
+foreach S, idxs in nS{
+(obj_out[idxs], xhat_out1[idxs], xhat_out2[idxs], ampl_res[idxs], out[idxs]) = ampl_app (S, 0, stoch_model, illinois, edrevised_model, ascii_data, print_results, wind_data);
+
+
+foreach B, idxb in [10:Batch:10]{
+ foreach k in [0:B]{
+ (obj_out_l[idxs][idxb][k], xhat_out_l1[idxs][idxb][k], xhat_out_l2[idxs][idxb][k], ampl_l_res[idxs][idxb][k], out_l[idxs][idxb][k]) = ampl_app (S, 0, stoch_model, illinois, edrevised_model, ascii_data, print_results, wind_data);
+
+ (obj_out_u[idxs][idxb][k], ampl_u_res[idxs][idxb][k], out_u[idxs][idxb][k]) = ampl_app_U(S, 1, stoch_model, xhat_out1[idxs], illinois, edrevised_model, ascii_data, print_results, wind_data);
+
+}
+}
+}
+
+
+2013-08-27 01:13:50,549+0000 DEBUG textfiles END SWIFTSCRIPT:
+2013-08-27 01:13:50,549+0000 INFO Loader /tmp/inference4galaxy.swift: source file is new. Recompiling.
+2013-08-27 01:13:50,549+0000 DEBUG Loader kmlversion is >acc037ee-2fa6-4e7c-a365-1d291ab1f8a6-no-provenance<
+2013-08-27 01:13:50,549+0000 DEBUG Loader build version is >acc037ee-2fa6-4e7c-a365-1d291ab1f8a6-no-provenance<
+2013-08-27 01:13:51,281+0000 INFO Warnings Warning: The @ syntax for function invocation is deprecated
+2013-08-27 01:13:51,848+0000 INFO Loader RUN_START
+2013-08-27 01:13:51,850+0000 INFO SwiftExecutor swift.home = /home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/..
+2013-08-27 01:13:51,860+0000 INFO swift Using sites file: /tmp/sites.xml
+2013-08-27 01:13:51,886+0000 INFO swift Using tc.data: /tmp/tc
+2013-08-27 01:13:51,956+0000 INFO SiteCatalogParser [Error] sites.xml, line 1, col 9: cvc-elt.1: Cannot find the declaration of element 'config'.
+2013-08-27 01:13:51,983+0000 INFO AbstractScheduler Setting resources to: {midway=midway}
+2013-08-27 01:13:51,986+0000 INFO swift Swift trunk swift-r7005 cog-r3767
+
+2013-08-27 01:13:51,987+0000 INFO swift RUNID id=run:20130827-0113-r1k3cjmc
+2013-08-27 01:13:52,006+0000 INFO RuntimeStats$ProgressTicker
+2013-08-27 01:13:52,020+0000 INFO CreateArray CREATEARRAY START array=dataset:20130827-0113-jpj1ff9e:720000000001
+2013-08-27 01:13:52,020+0000 INFO CreateArray CREATEARRAY MEMBER array=dataset:20130827-0113-jpj1ff9e:720000000001 index=0 member=dataset:20130827-0113-jpj1ff9e:720000000002
+2013-08-27 01:13:52,020+0000 INFO CreateArray CREATEARRAY COMPLETED array=dataset:20130827-0113-jpj1ff9e:720000000001
+2013-08-27 01:13:52,020+0000 INFO AbstractDataNode All partial closes for Batch:int = 20 - Closed have happened. Closing fully.
+2013-08-27 01:13:52,022+0000 INFO AbstractDataNode All partial closes for nS:int[int] - Closed have happened. Closing fully.
+2013-08-27 01:13:52,023+0000 DEBUG swift FOREACH_IT_START line=73 thread=R-42-0
+2013-08-27 01:13:52,023+0000 DEBUG swift SCOPE thread=R-42-0
+2013-08-27 01:13:52,023+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0x2 name=ampl_app
+2013-08-27 01:13:52,026+0000 DEBUG swift FOREACH_IT_START line=77 thread=R-42-0-1-0
+2013-08-27 01:13:52,026+0000 DEBUG swift SCOPE thread=R-42-0-1-0
+2013-08-27 01:13:52,026+0000 DEBUG swift FOREACH_IT_START line=77 thread=R-42-0-1x2
+2013-08-27 01:13:52,026+0000 DEBUG swift SCOPE thread=R-42-0-1x2
+2013-08-27 01:13:52,026+0000 DEBUG swift FOREACH_IT_START line=78 thread=R-42-0-1-0x2
+2013-08-27 01:13:52,026+0000 DEBUG swift SCOPE thread=R-42-0-1-0x2
+2013-08-27 01:13:52,026+0000 DEBUG swift FOREACH_IT_START line=78 thread=R-42-0-1x2-0
+2013-08-27 01:13:52,026+0000 DEBUG swift FOREACH_IT_START line=78 thread=R-42-0-1-0-1
+2013-08-27 01:13:52,026+0000 DEBUG swift FOREACH_IT_START line=78 thread=R-42-0-1x3
+2013-08-27 01:13:52,026+0000 DEBUG swift SCOPE thread=R-42-0-1-0-1
+2013-08-27 01:13:52,026+0000 DEBUG swift SCOPE thread=R-42-0-1x3
+2013-08-27 01:13:52,026+0000 DEBUG swift FOREACH_IT_START line=78 thread=R-42-0-1x2-2
+2013-08-27 01:13:52,026+0000 DEBUG swift SCOPE thread=R-42-0-1x2-0
+2013-08-27 01:13:52,026+0000 DEBUG swift SCOPE thread=R-42-0-1x2-2
+2013-08-27 01:13:52,026+0000 DEBUG swift FOREACH_IT_START line=78 thread=R-42-0-1x2-3
+2013-08-27 01:13:52,026+0000 DEBUG swift FOREACH_IT_START line=78 thread=R-42-0-1-0-4
+2013-08-27 01:13:52,026+0000 DEBUG swift SCOPE thread=R-42-0-1x2-3
+2013-08-27 01:13:52,026+0000 DEBUG swift SCOPE thread=R-42-0-1-0-4
+2013-08-27 01:13:52,026+0000 DEBUG swift FOREACH_IT_START line=78 thread=R-42-0-1-0-3
+2013-08-27 01:13:52,027+0000 DEBUG swift FOREACH_IT_START line=78 thread=R-42-0-1x2-5
+2013-08-27 01:13:52,027+0000 DEBUG swift SCOPE thread=R-42-0-1x2-5
+2013-08-27 01:13:52,027+0000 DEBUG swift FOREACH_IT_START line=78 thread=R-42-0-1-0-6
+2013-08-27 01:13:52,027+0000 DEBUG swift SCOPE thread=R-42-0-1-0-6
+2013-08-27 01:13:52,027+0000 DEBUG swift FOREACH_IT_START line=78 thread=R-42-0-1x2-6
+2013-08-27 01:13:52,027+0000 DEBUG swift SCOPE thread=R-42-0-1x2-6
+2013-08-27 01:13:52,027+0000 DEBUG swift FOREACH_IT_START line=78 thread=R-42-0-1-0-7
+2013-08-27 01:13:52,027+0000 DEBUG swift SCOPE thread=R-42-0-1-0-7
+2013-08-27 01:13:52,027+0000 DEBUG swift FOREACH_IT_START line=78 thread=R-42-0-1x2-7
+2013-08-27 01:13:52,027+0000 DEBUG swift SCOPE thread=R-42-0-1x2-7
+2013-08-27 01:13:52,027+0000 DEBUG swift FOREACH_IT_START line=78 thread=R-42-0-1-0-8
+2013-08-27 01:13:52,027+0000 DEBUG swift SCOPE thread=R-42-0-1-0-8
+2013-08-27 01:13:52,027+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1-0x3 name=ampl_app
+2013-08-27 01:13:52,027+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1-0-1x2 name=ampl_app_U
+2013-08-27 01:13:52,027+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1x4 name=ampl_app_U
+2013-08-27 01:13:52,027+0000 DEBUG swift FOREACH_IT_START line=78 thread=R-42-0-1x2-8
+2013-08-27 01:13:52,027+0000 DEBUG swift SCOPE thread=R-42-0-1x2-8
+2013-08-27 01:13:52,027+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1-0-1-0 name=ampl_app
+2013-08-27 01:13:52,027+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1x3-0 name=ampl_app
+2013-08-27 01:13:52,027+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1x2-0-1 name=ampl_app_U
+2013-08-27 01:13:52,027+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1x2-0x2 name=ampl_app
+2013-08-27 01:13:52,027+0000 DEBUG swift FOREACH_IT_START line=78 thread=R-42-0-1-0-9
+2013-08-27 01:13:52,027+0000 DEBUG swift SCOPE thread=R-42-0-1-0-9
+2013-08-27 01:13:52,027+0000 DEBUG swift FOREACH_IT_START line=78 thread=R-42-0-1x2-9
+2013-08-27 01:13:52,027+0000 DEBUG swift SCOPE thread=R-42-0-1x2-9
+2013-08-27 01:13:52,027+0000 DEBUG swift FOREACH_IT_START line=78 thread=R-42-0-1-0-10
+2013-08-27 01:13:52,026+0000 DEBUG swift FOREACH_IT_START line=78 thread=R-42-0-1-0-2
+2013-08-27 01:13:52,027+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1x2-2-1 name=ampl_app_U
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+2013-08-27 01:13:52,028+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1x2-3-0 name=ampl_app
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+2013-08-27 01:13:52,028+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1-0-4-0 name=ampl_app
+2013-08-27 01:13:52,028+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1x2-5-0 name=ampl_app
+2013-08-27 01:13:52,028+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1-0-6-0 name=ampl_app
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+2013-08-27 01:13:52,028+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1-0-6-1 name=ampl_app_U
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+2013-08-27 01:13:52,029+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1-0-7-1 name=ampl_app_U
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+2013-08-27 01:13:52,029+0000 DEBUG swift SCOPE thread=R-42-0-1x2-19
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+2013-08-27 01:13:52,029+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1x2-7-1 name=ampl_app_U
+2013-08-27 01:13:52,029+0000 DEBUG swift SCOPE thread=R-42-0-1x2-20
+2013-08-27 01:13:52,029+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1x2-7-0 name=ampl_app
+2013-08-27 01:13:52,027+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1x2-2-0 name=ampl_app
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+2013-08-27 01:13:52,026+0000 DEBUG swift FOREACH_IT_START line=78 thread=R-42-0-1x2-4
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+2013-08-27 01:13:52,029+0000 DEBUG swift SCOPE thread=R-42-0-1x2-4
+2013-08-27 01:13:52,030+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1-0-8-1 name=ampl_app_U
+2013-08-27 01:13:52,030+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1x2-6-1 name=ampl_app_U
+2013-08-27 01:13:52,030+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1x2-8-1 name=ampl_app_U
+2013-08-27 01:13:52,030+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1x2-8-0 name=ampl_app
+2013-08-27 01:13:52,030+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1-0-2-1 name=ampl_app_U
+2013-08-27 01:13:52,030+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1-0-10-1 name=ampl_app_U
+2013-08-27 01:13:52,030+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1x2-10-0 name=ampl_app
+2013-08-27 01:13:52,030+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1x2-10-1 name=ampl_app_U
+2013-08-27 01:13:52,030+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1-0-9-0 name=ampl_app
+2013-08-27 01:13:52,030+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1-0-10-0 name=ampl_app
+2013-08-27 01:13:52,030+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1x2-11-0 name=ampl_app
+2013-08-27 01:13:52,031+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1x2-12-0 name=ampl_app
+2013-08-27 01:13:52,031+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1x2-13-0 name=ampl_app
+2013-08-27 01:13:52,031+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1-0-9-1 name=ampl_app_U
+2013-08-27 01:13:52,031+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1x2-14-0 name=ampl_app
+2013-08-27 01:13:52,032+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1x2-15-0 name=ampl_app
+2013-08-27 01:13:52,032+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1-0-2-0 name=ampl_app
+2013-08-27 01:13:52,032+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1x2-9-0 name=ampl_app
+2013-08-27 01:13:52,032+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1-0-7-0 name=ampl_app
+2013-08-27 01:13:52,032+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1x2-11-1 name=ampl_app_U
+2013-08-27 01:13:52,032+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1x2-15-1 name=ampl_app_U
+2013-08-27 01:13:52,032+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1x2-16-0 name=ampl_app
+2013-08-27 01:13:52,032+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1-0-8-0 name=ampl_app
+2013-08-27 01:13:52,033+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1x2-17-1 name=ampl_app_U
+2013-08-27 01:13:52,033+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1x2-17-0 name=ampl_app
+2013-08-27 01:13:52,033+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1x2-18-1 name=ampl_app_U
+2013-08-27 01:13:52,033+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1x2-18-0 name=ampl_app
+2013-08-27 01:13:52,033+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1x2-19-1 name=ampl_app_U
+2013-08-27 01:13:52,033+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1x2-20-1 name=ampl_app_U
+2013-08-27 01:13:52,033+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1x2-19-0 name=ampl_app
+2013-08-27 01:13:52,033+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1-0-3-1 name=ampl_app_U
+2013-08-27 01:13:52,034+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1-0-5-1 name=ampl_app_U
+2013-08-27 01:13:52,034+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1x2-4-1 name=ampl_app_U
+2013-08-27 01:13:52,034+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1-0-3-0 name=ampl_app
+2013-08-27 01:13:52,034+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1-0-5-0 name=ampl_app
+2013-08-27 01:13:52,034+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1x2-4-0 name=ampl_app
+2013-08-27 01:13:52,035+0000 DEBUG swift PROCEDURE line=3 thread=R-42-0-1x2-20-0 name=ampl_app
+2013-08-27 01:13:52,035+0000 INFO GlobalSubmitQueue No global submit throttle set. Using default (1024)
+2013-08-27 01:13:52,036+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1x2-16-1 name=ampl_app_U
+2013-08-27 01:13:52,036+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1x2-9-1 name=ampl_app_U
+2013-08-27 01:13:52,036+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1x2-14-1 name=ampl_app_U
+2013-08-27 01:13:52,036+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1x2-13-1 name=ampl_app_U
+2013-08-27 01:13:52,036+0000 DEBUG swift PROCEDURE line=29 thread=R-42-0-1x2-12-1 name=ampl_app_U
+2013-08-27 01:13:52,037+0000 INFO LateBindingScheduler jobs queued: 6
+2013-08-27 01:13:52,039+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:13:52,039+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-6cztedel thread=R-42-0-1x2-3-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,039+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-7cztedel thread=R-42-0-1x2-0x2 host=midway replicationGroup=null
+2013-08-27 01:13:52,039+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-bcztedel thread=R-42-0-1x2-8-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,039+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-9cztedel thread=R-42-0-1x2-7-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,039+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-ccztedel thread=R-42-0-1x2-10-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,039+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-fcztedel thread=R-42-0-1-0-9-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,039+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-ecztedel thread=R-42-0-1x2-12-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,039+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-gcztedel thread=R-42-0x2 host=midway replicationGroup=null
+2013-08-27 01:13:52,039+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-5cztedel thread=R-42-0-1x3-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,039+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-acztedel thread=R-42-0-1-0x3 host=midway replicationGroup=null
+2013-08-27 01:13:52,039+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-dcztedel thread=R-42-0-1-0-10-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,040+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-8cztedel thread=R-42-0-1x2-2-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,040+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-hcztedel thread=R-42-0-1x2-13-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,040+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-icztedel thread=R-42-0-1x2-14-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,040+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-jcztedel thread=R-42-0-1x2-9-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,040+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-kcztedel thread=R-42-0-1-0-2-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,040+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-lcztedel thread=R-42-0-1x2-16-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,040+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-ncztedel thread=R-42-0-1-0-4-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,040+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-ocztedel thread=R-42-0-1x2-11-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,040+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-pcztedel thread=R-42-0-1x2-18-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,040+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-rcztedel thread=R-42-0-1-0-8-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,040+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-qcztedel thread=R-42-0-1-0-1-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,040+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-scztedel thread=R-42-0-1-0-3-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,040+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-mcztedel thread=R-42-0-1x2-15-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-gcztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat10000.out, outdir/xhat20000.out, obj_outdir/obj_ampl0000.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res0000.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/g/runampl-gcztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-dcztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0010.out, outdir/xhat_l20000_0000.0010.out, obj_outdir/obj_out_l0000_0000.0010.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0010.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/d/runampl-dcztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-ccztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0010.out, outdir/xhat_l20000_0001.0010.out, obj_outdir/obj_out_l0000_0001.0010.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0010.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/c/runampl-ccztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-8cztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0002.out, outdir/xhat_l20000_0001.0002.out, obj_outdir/obj_out_l0000_0001.0002.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0002.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/8/runampl-8cztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-9cztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0007.out, outdir/xhat_l20000_0001.0007.out, obj_outdir/obj_out_l0000_0001.0007.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0007.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/9/runampl-9cztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-hcztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0013.out, outdir/xhat_l20000_0001.0013.out, obj_outdir/obj_out_l0000_0001.0013.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0013.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/h/runampl-hcztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-kcztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0002.out, outdir/xhat_l20000_0000.0002.out, obj_outdir/obj_out_l0000_0000.0002.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0002.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/k/runampl-kcztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-mcztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0015.out, outdir/xhat_l20000_0001.0015.out, obj_outdir/obj_out_l0000_0001.0015.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0015.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/m/runampl-mcztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-lcztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0016.out, outdir/xhat_l20000_0001.0016.out, obj_outdir/obj_out_l0000_0001.0016.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0016.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/l/runampl-lcztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-7cztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0000.out, outdir/xhat_l20000_0001.0000.out, obj_outdir/obj_out_l0000_0001.0000.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0000.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/7/runampl-7cztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-6cztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0003.out, outdir/xhat_l20000_0001.0003.out, obj_outdir/obj_out_l0000_0001.0003.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0003.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/6/runampl-6cztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-fcztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0009.out, outdir/xhat_l20000_0000.0009.out, obj_outdir/obj_out_l0000_0000.0009.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0009.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/f/runampl-fcztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-acztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0000.out, outdir/xhat_l20000_0000.0000.out, obj_outdir/obj_out_l0000_0000.0000.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0000.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/a/runampl-acztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-scztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0003.out, outdir/xhat_l20000_0000.0003.out, obj_outdir/obj_out_l0000_0000.0003.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0003.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/s/runampl-scztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-ncztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0004.out, outdir/xhat_l20000_0000.0004.out, obj_outdir/obj_out_l0000_0000.0004.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0004.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/n/runampl-ncztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-jcztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0009.out, outdir/xhat_l20000_0001.0009.out, obj_outdir/obj_out_l0000_0001.0009.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0009.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/j/runampl-jcztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-qcztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0001.out, outdir/xhat_l20000_0000.0001.out, obj_outdir/obj_out_l0000_0000.0001.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0001.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/q/runampl-qcztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-rcztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0008.out, outdir/xhat_l20000_0000.0008.out, obj_outdir/obj_out_l0000_0000.0008.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0008.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/r/runampl-rcztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-5cztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0001.out, outdir/xhat_l20000_0001.0001.out, obj_outdir/obj_out_l0000_0001.0001.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0001.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/5/runampl-5cztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-ecztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0012.out, outdir/xhat_l20000_0001.0012.out, obj_outdir/obj_out_l0000_0001.0012.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0012.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/e/runampl-ecztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-bcztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0008.out, outdir/xhat_l20000_0001.0008.out, obj_outdir/obj_out_l0000_0001.0008.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0008.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/b/runampl-bcztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-ocztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0011.out, outdir/xhat_l20000_0001.0011.out, obj_outdir/obj_out_l0000_0001.0011.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0011.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/o/runampl-ocztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-icztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0014.out, outdir/xhat_l20000_0001.0014.out, obj_outdir/obj_out_l0000_0001.0014.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0014.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/i/runampl-icztedel host=midway
+2013-08-27 01:13:52,041+0000 DEBUG swift JOB_START jobid=runampl-pcztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0018.out, outdir/xhat_l20000_0001.0018.out, obj_outdir/obj_out_l0000_0001.0018.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0018.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/p/runampl-pcztedel host=midway
+2013-08-27 01:13:52,056+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-tcztedel thread=R-42-0-1x2-17-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,056+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-xcztedel thread=R-42-0-1x2-6-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,056+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-ycztedel thread=R-42-0-1x2-4-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,056+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-1dztedel thread=R-42-0-1x2-19-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,056+0000 DEBUG swift JOB_START jobid=runampl-tcztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0017.out, outdir/xhat_l20000_0001.0017.out, obj_outdir/obj_out_l0000_0001.0017.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0017.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/t/runampl-tcztedel host=midway
+2013-08-27 01:13:52,056+0000 DEBUG swift JOB_START jobid=runampl-xcztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0006.out, outdir/xhat_l20000_0001.0006.out, obj_outdir/obj_out_l0000_0001.0006.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0006.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/x/runampl-xcztedel host=midway
+2013-08-27 01:13:52,056+0000 DEBUG swift JOB_START jobid=runampl-ycztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0004.out, outdir/xhat_l20000_0001.0004.out, obj_outdir/obj_out_l0000_0001.0004.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0004.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/y/runampl-ycztedel host=midway
+2013-08-27 01:13:52,056+0000 DEBUG swift JOB_START jobid=runampl-1dztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0019.out, outdir/xhat_l20000_0001.0019.out, obj_outdir/obj_out_l0000_0001.0019.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0019.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/1/runampl-1dztedel host=midway
+2013-08-27 01:13:52,056+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-ucztedel thread=R-42-0-1-0-7-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,056+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-vcztedel thread=R-42-0-1-0-5-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,056+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-zcztedel thread=R-42-0-1x2-5-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,056+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-0dztedel thread=R-42-0-1-0-6-0 host=midway replicationGroup=null
+2013-08-27 01:13:52,057+0000 DEBUG swift JOB_START jobid=runampl-ucztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0007.out, outdir/xhat_l20000_0000.0007.out, obj_outdir/obj_out_l0000_0000.0007.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0007.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/u/runampl-ucztedel host=midway
+2013-08-27 01:13:52,057+0000 DEBUG swift JOB_START jobid=runampl-vcztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0005.out, outdir/xhat_l20000_0000.0005.out, obj_outdir/obj_out_l0000_0000.0005.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0005.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/v/runampl-vcztedel host=midway
+2013-08-27 01:13:52,057+0000 DEBUG swift JOB_START jobid=runampl-0dztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0006.out, outdir/xhat_l20000_0000.0006.out, obj_outdir/obj_out_l0000_0000.0006.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0006.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/0/runampl-0dztedel host=midway
+2013-08-27 01:13:52,057+0000 DEBUG swift JOB_START jobid=runampl-zcztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0005.out, outdir/xhat_l20000_0001.0005.out, obj_outdir/obj_out_l0000_0001.0005.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0005.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/z/runampl-zcztedel host=midway
+2013-08-27 01:13:52,089+0000 INFO LocalService Started local service: 128.135.112.73:50000
+2013-08-27 01:13:52,094+0000 INFO BootstrapService Socket bound. URL is http://swift.rcc.uchicago.edu:50001
+2013-08-27 01:13:52,124+0000 INFO Settings Local contacts: [http://128.135.112.73:50003, http://172.25.181.1:50003, http://10.50.181.1:50003]
+2013-08-27 01:13:52,126+0000 INFO CoasterService Started local service: http://128.135.112.73:50003
+2013-08-27 01:13:52,126+0000 INFO CoasterService Reserving channel for registration
+2013-08-27 01:13:52,141+0000 INFO MetaChannel MetaChannel [context: cpipe, boundTo: null] binding to cpipe://1
+2013-08-27 01:13:52,142+0000 INFO MetaChannel MetaChannel [context: spipe, boundTo: null] binding to spipe://1
+2013-08-27 01:13:52,142+0000 INFO CoasterService Sending registration
+2013-08-27 01:13:52,145+0000 INFO MetaChannel Trying to re-bind current channel
+2013-08-27 01:13:52,146+0000 INFO RequestHandler Handler(tag: 1, REGISTER) unregistering (send)
+2013-08-27 01:13:52,146+0000 INFO CoasterService Registration complete
+2013-08-27 01:13:52,146+0000 INFO CoasterService Started coaster service: http://128.135.112.73:50002
+2013-08-27 01:13:52,148+0000 INFO RequestHandler Handler(tag: 1, CONFIGSERVICE) unregistering (send)
+2013-08-27 01:13:52,160+0000 INFO BlockQueueProcessor Starting... id=0827-1301520
+2013-08-27 01:13:52,163+0000 INFO RequestHandler Handler(tag: 3, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,164+0000 INFO RequestHandler Handler(tag: 2, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,165+0000 INFO RequestHandler Handler(tag: 4, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,166+0000 INFO RequestHandler Handler(tag: 5, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,167+0000 INFO RequestHandler Handler(tag: 6, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,167+0000 INFO BlockQueueProcessor
+Settings {
+ slots = 2
+ jobsPerNode = 16
+ workersPerNode = 16
+ nodeGranularity = 1
+ allocationStepSize = 0.1
+ maxNodes = 1
+ lowOverallocation = 100.0
+ highOverallocation = 100.0
+ overallocationDecayFactor = 0.001
+ spread = 0.9
+ reserve = 60.000s
+ maxtime = 7500
+ remoteMonitorEnabled = false
+ internalHostname = 10.50.181.1
+ hookClass = null
+ workerManager = block
+ workerLoggingLevel = NONE
+ workerLoggingDirectory = DEFAULT
+ ldLibraryPath = null
+ workerCopies = null
+ directory = null
+ useHashBang = null
+ parallelism = 0.01
+ coresPerNode = 1
+ attributes = {queue=sandyb}
+}
+
+2013-08-27 01:13:52,167+0000 INFO BlockQueueProcessor Jobs in holding queue: 2
+2013-08-27 01:13:52,167+0000 INFO BlockQueueProcessor Time estimate for holding queue (seconds): 2
+2013-08-27 01:13:52,168+0000 INFO BlockQueueProcessor Allocating blocks for a total walltime of: 2s
+2013-08-27 01:13:52,168+0000 INFO BlockQueueProcessor Considering: Job(id:1 7200.000s)
+2013-08-27 01:13:52,168+0000 INFO BlockQueueProcessor Max Walltime (seconds): 7200
+2013-08-27 01:13:52,168+0000 INFO RequestHandler Handler(tag: 7, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,168+0000 INFO BlockQueueProcessor Time estimate (seconds): 7440
+2013-08-27 01:13:52,168+0000 INFO BlockQueueProcessor Total for this new Block (est. seconds): 1
+2013-08-27 01:13:52,168+0000 INFO RequestHandler Handler(tag: 8, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,169+0000 INFO RequestHandler Handler(tag: 9, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,170+0000 INFO RequestHandler Handler(tag: 11, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,170+0000 INFO BlockQueueProcessor index: 1, last: 0, holding.size(): 2
+2013-08-27 01:13:52,170+0000 INFO BlockQueueProcessor Queued: 2 jobs to new Block
+2013-08-27 01:13:52,170+0000 INFO BlockQueueProcessor index: 1, last: 0, ii: 2, holding.size(): 2
+2013-08-27 01:13:52,170+0000 INFO Block Starting block: workers=16, walltime=7440.000s
+2013-08-27 01:13:52,171+0000 INFO RequestHandler Handler(tag: 10, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,172+0000 INFO RequestHandler Handler(tag: 12, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,172+0000 INFO RemoteLogHandler BLOCK_REQUESTED id=0827-1301520-000000, cores=16, coresPerWorker=1, walltime=7440
+2013-08-27 01:13:52,172+0000 INFO RequestHandler Handler(tag: 2, RLOG) unregistering (send)
+2013-08-27 01:13:52,172+0000 INFO RequestHandler Handler(tag: 13, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,173+0000 INFO BlockTaskSubmitter Queuing block Block 0827-1301520-000000 (16x7440.000s) for submission
+2013-08-27 01:13:52,173+0000 INFO BlockQueueProcessor Added 2 jobs to new blocks
+2013-08-27 01:13:52,173+0000 INFO BlockTaskSubmitter Submitting block Block 0827-1301520-000000 (16x7440.000s)
+2013-08-27 01:13:52,173+0000 INFO BlockQueueProcessor Committed 10 new jobs
+2013-08-27 01:13:52,173+0000 INFO ExecutionTaskHandler provider=slurm
+2013-08-27 01:13:52,173+0000 INFO RequestHandler Handler(tag: 14, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,174+0000 INFO RequestHandler Handler(tag: 15, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,175+0000 INFO RequestHandler Handler(tag: 17, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,176+0000 INFO RequestHandler Handler(tag: 16, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,176+0000 INFO Block Block task status changed: Submitting
+2013-08-27 01:13:52,177+0000 INFO RequestHandler Handler(tag: 18, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,177+0000 INFO RequestHandler Handler(tag: 19, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,178+0000 INFO RequestHandler Handler(tag: 20, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,179+0000 INFO RequestHandler Handler(tag: 21, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,180+0000 INFO RequestHandler Handler(tag: 22, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,180+0000 INFO RequestHandler Handler(tag: 23, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,181+0000 INFO RequestHandler Handler(tag: 24, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,182+0000 INFO RequestHandler Handler(tag: 25, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,182+0000 INFO RequestHandler Handler(tag: 26, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,183+0000 INFO RequestHandler Handler(tag: 27, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,183+0000 INFO RequestHandler Handler(tag: 28, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,184+0000 INFO RequestHandler Handler(tag: 29, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,184+0000 INFO RequestHandler Handler(tag: 30, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,185+0000 INFO RequestHandler Handler(tag: 31, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,185+0000 INFO RequestHandler Handler(tag: 32, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,185+0000 INFO RequestHandler Handler(tag: 33, SUBMITJOB) unregistering (send)
+2013-08-27 01:13:52,191+0000 DEBUG AbstractExecutor Writing Slurm script to /home/maheshwari/.globus/scripts/Slurm3927061060097759195.submit
+2013-08-27 01:13:52,192+0000 DEBUG AbstractExecutor Wrote Slurm script to /home/maheshwari/.globus/scripts/Slurm3927061060097759195.submit
+2013-08-27 01:13:52,192+0000 DEBUG AbstractExecutor Command line: sbatch /home/maheshwari/.globus/scripts/Slurm3927061060097759195.submit
+2013-08-27 01:13:52,208+0000 DEBUG AbstractExecutor sbatch done (exit code 0)
+2013-08-27 01:13:52,208+0000 DEBUG AbstractExecutor Waiting for output from sbatch
+2013-08-27 01:13:52,208+0000 DEBUG AbstractExecutor Output from sbatch is: "Submitted batch job 5212616"
+2013-08-27 01:13:52,208+0000 DEBUG AbstractExecutor Submitted job with id '5212616'
+2013-08-27 01:13:52,209+0000 INFO Block Block task status changed: Submitted
+2013-08-27 01:13:52,459+0000 INFO AbstractQueuePoller Actively monitored: 0, New: 1, Done: 0
+2013-08-27 01:13:53,006+0000 INFO RuntimeStats$ProgressTicker Selecting site:1 Submitted:32
+2013-08-27 01:13:53,333+0000 INFO BlockQueueProcessor Jobs in holding queue: 16
+2013-08-27 01:13:53,333+0000 INFO BlockQueueProcessor Time estimate for holding queue (seconds): 18
+2013-08-27 01:13:53,333+0000 INFO BlockQueueProcessor Allocating blocks for a total walltime of: 18s
+2013-08-27 01:13:53,333+0000 INFO BlockQueueProcessor Considering: Job(id:31 7200.000s)
+2013-08-27 01:13:53,333+0000 INFO BlockQueueProcessor Max Walltime (seconds): 7200
+2013-08-27 01:13:53,333+0000 INFO BlockQueueProcessor Time estimate (seconds): 7440
+2013-08-27 01:13:53,333+0000 INFO BlockQueueProcessor Total for this new Block (est. seconds): 15
+2013-08-27 01:13:53,333+0000 INFO BlockQueueProcessor index: 15, last: 0, holding.size(): 16
+2013-08-27 01:13:53,334+0000 INFO BlockQueueProcessor Queued: 16 jobs to new Block
+2013-08-27 01:13:53,334+0000 INFO BlockQueueProcessor index: 15, last: 0, ii: 16, holding.size(): 16
+2013-08-27 01:13:53,334+0000 INFO Block Starting block: workers=16, walltime=7440.000s
+2013-08-27 01:13:53,334+0000 INFO RemoteLogHandler BLOCK_REQUESTED id=0827-1301520-000001, cores=16, coresPerWorker=1, walltime=7440
+2013-08-27 01:13:53,334+0000 INFO BlockTaskSubmitter Queuing block Block 0827-1301520-000001 (16x7440.000s) for submission
+2013-08-27 01:13:53,334+0000 INFO RequestHandler Handler(tag: 3, RLOG) unregistering (send)
+2013-08-27 01:13:53,334+0000 INFO BlockQueueProcessor Added 16 jobs to new blocks
+2013-08-27 01:13:53,334+0000 INFO BlockTaskSubmitter Submitting block Block 0827-1301520-000001 (16x7440.000s)
+2013-08-27 01:13:53,334+0000 INFO ExecutionTaskHandler provider=slurm
+2013-08-27 01:13:53,334+0000 INFO Block Block task status changed: Submitting
+2013-08-27 01:13:53,345+0000 DEBUG AbstractExecutor Writing Slurm script to /home/maheshwari/.globus/scripts/Slurm3983017732998933676.submit
+2013-08-27 01:13:53,345+0000 DEBUG AbstractExecutor Wrote Slurm script to /home/maheshwari/.globus/scripts/Slurm3983017732998933676.submit
+2013-08-27 01:13:53,345+0000 DEBUG AbstractExecutor Command line: sbatch /home/maheshwari/.globus/scripts/Slurm3983017732998933676.submit
+2013-08-27 01:13:53,357+0000 DEBUG AbstractExecutor sbatch done (exit code 0)
+2013-08-27 01:13:53,357+0000 DEBUG AbstractExecutor Waiting for output from sbatch
+2013-08-27 01:13:53,357+0000 DEBUG AbstractExecutor Output from sbatch is: "Submitted batch job 5212617"
+2013-08-27 01:13:53,357+0000 DEBUG AbstractExecutor Submitted job with id '5212617'
+2013-08-27 01:13:53,357+0000 INFO Block Block task status changed: Submitted
+2013-08-27 01:13:54,007+0000 INFO RuntimeStats$ProgressTicker Selecting site:1 Submitted:32
+2013-08-27 01:13:55,007+0000 INFO RuntimeStats$ProgressTicker Selecting site:1 Submitted:32
+2013-08-27 01:13:56,007+0000 INFO RuntimeStats$ProgressTicker Selecting site:1 Submitted:32
+2013-08-27 01:13:57,007+0000 INFO RuntimeStats$ProgressTicker Selecting site:1 Submitted:32
+2013-08-27 01:13:57,472+0000 INFO AbstractQueuePoller Actively monitored: 1, New: 1, Done: 0
+2013-08-27 01:13:58,008+0000 INFO RuntimeStats$ProgressTicker Selecting site:1 Submitted:32
+2013-08-27 01:13:59,008+0000 INFO RuntimeStats$ProgressTicker Selecting site:1 Submitted:32
+2013-08-27 01:13:59,349+0000 INFO AbstractCoasterChannel Timeout check started for TCPChannel [type: server, contact: unknown]
+2013-08-27 01:13:59,353+0000 INFO AbstractTCPChannel Channel started: TCPChannel [type: server, contact: 10.50.182.128:49546]
+2013-08-27 01:13:59,354+0000 INFO LocalTCPService Received registration: blockid = 0827-1301520-000001, url = midway384
+2013-08-27 01:13:59,354+0000 INFO MetaChannel MetaChannel [context: worker-1, boundTo: null] binding to TCPChannel [type: server, contact: 10.50.182.128:49546]
+2013-08-27 01:13:59,355+0000 INFO RemoteLogHandler WORKER_ACTIVE blockid=0827-1301520-000001
+2013-08-27 01:13:59,356+0000 INFO RequestHandler Handler(tag: 4, RLOG) unregistering (send)
+2013-08-27 01:13:59,357+0000 DEBUG Cpu worker started: block=0827-1301520-000001 host=midway384 id=0
+2013-08-27 01:13:59,357+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=0
+2013-08-27 01:13:59,358+0000 INFO Block Started CPU 0:1377566039s
+2013-08-27 01:13:59,358+0000 DEBUG Cpu worker started: block=0827-1301520-000001 host=midway384 id=1
+2013-08-27 01:13:59,358+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=1
+2013-08-27 01:13:59,358+0000 INFO Block Started CPU 1:1377566039s
+2013-08-27 01:13:59,358+0000 DEBUG Cpu worker started: block=0827-1301520-000001 host=midway384 id=2
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+2013-08-27 01:13:59,358+0000 DEBUG Cpu worker started: block=0827-1301520-000001 host=midway384 id=7
+2013-08-27 01:13:59,358+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=7
+2013-08-27 01:13:59,358+0000 INFO Block Started CPU 7:1377566039s
+2013-08-27 01:13:59,358+0000 DEBUG Cpu worker started: block=0827-1301520-000001 host=midway384 id=8
+2013-08-27 01:13:59,358+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=8
+2013-08-27 01:13:59,358+0000 INFO Block Started CPU 8:1377566039s
+2013-08-27 01:13:59,358+0000 DEBUG Cpu worker started: block=0827-1301520-000001 host=midway384 id=9
+2013-08-27 01:13:59,358+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=9
+2013-08-27 01:13:59,358+0000 INFO Block Started CPU 9:1377566039s
+2013-08-27 01:13:59,358+0000 DEBUG Cpu worker started: block=0827-1301520-000001 host=midway384 id=10
+2013-08-27 01:13:59,358+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=10
+2013-08-27 01:13:59,358+0000 INFO Block Started CPU 10:1377566039s
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+2013-08-27 01:13:59,358+0000 INFO Block Started CPU 12:1377566039s
+2013-08-27 01:13:59,358+0000 DEBUG Cpu worker started: block=0827-1301520-000001 host=midway384 id=13
+2013-08-27 01:13:59,359+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=13
+2013-08-27 01:13:59,359+0000 INFO Block Started CPU 13:1377566039s
+2013-08-27 01:13:59,359+0000 DEBUG Cpu worker started: block=0827-1301520-000001 host=midway384 id=14
+2013-08-27 01:13:59,359+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=14
+2013-08-27 01:13:59,359+0000 INFO Block Started CPU 14:1377566039s
+2013-08-27 01:13:59,359+0000 DEBUG Cpu worker started: block=0827-1301520-000001 host=midway384 id=15
+2013-08-27 01:13:59,359+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=15
+2013-08-27 01:13:59,359+0000 INFO Block Started CPU 15:1377566039s
+2013-08-27 01:13:59,359+0000 INFO Block Started worker 0827-1301520-000001:000000
+2013-08-27 01:13:59,359+0000 INFO AbstractStreamCoasterChannel Using NIO sender for TCPChannel [type: server, contact: 0827-1301520-000001-000000]
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0.0009.out|outdir/xhat_l20000_0000.0009.out|Results/ampl_res_l0000_0000.0009.out|outdir/out_l0000_0000.0009.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0009.out outdir/xhat_l20000_0000.0009.out obj_outdir/obj_out_l0000_0000.0009.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0009.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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1.0013.out|outdir/xhat_l20000_0001.0013.out|Results/ampl_res_l0000_0001.0013.out|outdir/out_l0000_0001.0013.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0013.out outdir/xhat_l20000_0001.0013.out obj_outdir/obj_out_l0000_0001.0013.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0013.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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1.0009.out|outdir/xhat_l20000_0001.0009.out|Results/ampl_res_l0000_0001.0009.out|outdir/out_l0000_0001.0009.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0009.out outdir/xhat_l20000_0001.0009.out obj_outdir/obj_out_l0000_0001.0009.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0009.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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0.0000.out|outdir/xhat_l20000_0000.0000.out|Results/ampl_res_l0000_0000.0000.out|outdir/out_l0000_0000.0000.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0000.out outdir/xhat_l20000_0000.0000.out obj_outdir/obj_out_l0000_0000.0000.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0000.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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1.0002.out|outdir/xhat_l20000_0001.0002.out|Results/ampl_res_l0000_0001.0002.out|outdir/out_l0000_0001.0002.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0002.out outdir/xhat_l20000_0001.0002.out obj_outdir/obj_out_l0000_0001.0002.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0002.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:13:59,363+0000 INFO RequestHandler Handler(tag: 9, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,363+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=5 Cpus sleeping: 1
+2013-08-27 01:13:59,363+0000 INFO Cpu 0827-1301520-000001:5 (quality: 1.0) submitting urn:1377566031944-1377566031984-1377566031985: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0003.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0003.out|outdir/xhat_l10000_000
1.0003.out|outdir/xhat_l20000_0001.0003.out|Results/ampl_res_l0000_0001.0003.out|outdir/out_l0000_0001.0003.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0003.out outdir/xhat_l20000_0001.0003.out obj_outdir/obj_out_l0000_0001.0003.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0003.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:13:59,363+0000 INFO RequestHandler Handler(tag: 10, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,363+0000 INFO TCPBufferManager Adjusting buffer size to 8650752 for 2 sockets
+2013-08-27 01:13:59,363+0000 INFO AbstractCoasterChannel Timeout check started for TCPChannel [type: server, contact: unknown]
+2013-08-27 01:13:59,363+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=6 Cpus sleeping: 1
+2013-08-27 01:13:59,363+0000 INFO AbstractTCPChannel Channel started: TCPChannel [type: server, contact: 10.50.181.33:37280]
+2013-08-27 01:13:59,363+0000 INFO Cpu 0827-1301520-000001:6 (quality: 1.0) submitting urn:1377566031938-1377566031987-1377566031988: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0011.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0011.out|outdir/xhat_l10000_000
1.0011.out|outdir/xhat_l20000_0001.0011.out|Results/ampl_res_l0000_0001.0011.out|outdir/out_l0000_0001.0011.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0011.out outdir/xhat_l20000_0001.0011.out obj_outdir/obj_out_l0000_0001.0011.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0011.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:13:59,364+0000 INFO RequestHandler Handler(tag: 11, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,364+0000 INFO LocalTCPService Received registration: blockid = 0827-1301520-000000, url = midway033
+2013-08-27 01:13:59,364+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=7 Cpus sleeping: 1
+2013-08-27 01:13:59,364+0000 INFO MetaChannel MetaChannel [context: worker-2, boundTo: null] binding to TCPChannel [type: server, contact: 10.50.181.33:37280]
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1.0007.out|outdir/xhat_l20000_0001.0007.out|Results/ampl_res_l0000_0001.0007.out|outdir/out_l0000_0001.0007.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0007.out outdir/xhat_l20000_0001.0007.out obj_outdir/obj_out_l0000_0001.0007.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0007.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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0.0008.out|outdir/xhat_l20000_0000.0008.out|Results/ampl_res_l0000_0000.0008.out|outdir/out_l0000_0000.0008.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0008.out outdir/xhat_l20000_0000.0008.out obj_outdir/obj_out_l0000_0000.0008.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0008.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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sults/ampl_res0000.out|outdir/ampl0000.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat10000.out outdir/xhat20000.out obj_outdir/obj_ampl0000.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res0000.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:13:59,365+0000 INFO Block Started CPU 15:1377566039s
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+2013-08-27 01:13:59,366+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=10 Cpus sleeping: 1
+2013-08-27 01:13:59,366+0000 INFO Cpu 0827-1301520-000001:10 (quality: 1.0) submitting urn:1377566031933-1377566031999-1377566032000: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0000.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0000.out|outdir/xhat_l10000_00
01.0000.out|outdir/xhat_l20000_0001.0000.out|Results/ampl_res_l0000_0001.0000.out|outdir/out_l0000_0001.0000.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0000.out outdir/xhat_l20000_0001.0000.out obj_outdir/obj_out_l0000_0001.0000.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0000.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:13:59,366+0000 INFO RequestHandler Handler(tag: 16, JOBSTATUS) unregistering (send)
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+2013-08-27 01:13:59,366+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=11 Cpus sleeping: 1
+2013-08-27 01:13:59,366+0000 INFO Cpu 0827-1301520-000001:11 (quality: 1.0) submitting urn:1377566031930-1377566032002-1377566032003: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0000.0010.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0000.0010.out|outdir/xhat_l10000_00
00.0010.out|outdir/xhat_l20000_0000.0010.out|Results/ampl_res_l0000_0000.0010.out|outdir/out_l0000_0000.0010.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0010.out outdir/xhat_l20000_0000.0010.out obj_outdir/obj_out_l0000_0000.0010.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0010.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:13:59,366+0000 DEBUG Cpu Stagein workerid=000000
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+2013-08-27 01:13:59,367+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=12 Cpus sleeping: 1
+2013-08-27 01:13:59,367+0000 INFO Cpu 0827-1301520-000001:12 (quality: 1.0) submitting urn:1377566031929-1377566032006-1377566032007: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0016.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0016.out|outdir/xhat_l10000_00
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+2013-08-27 01:13:59,367+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=13 Cpus sleeping: 1
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00.0001.out|outdir/xhat_l20000_0000.0001.out|Results/ampl_res_l0000_0000.0001.out|outdir/out_l0000_0000.0001.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0001.out outdir/xhat_l20000_0000.0001.out obj_outdir/obj_out_l0000_0000.0001.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0001.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:13:59,367+0000 INFO RequestHandler Handler(tag: 20, JOBSTATUS) unregistering (send)
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1.0010.out|outdir/xhat_l20000_0001.0010.out|Results/ampl_res_l0000_0001.0010.out|outdir/out_l0000_0001.0010.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0010.out outdir/xhat_l20000_0001.0010.out obj_outdir/obj_out_l0000_0001.0010.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0010.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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1.0015.out|outdir/xhat_l20000_0001.0015.out|Results/ampl_res_l0000_0001.0015.out|outdir/out_l0000_0001.0015.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0015.out outdir/xhat_l20000_0001.0015.out obj_outdir/obj_out_l0000_0001.0015.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0015.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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1.0008.out|outdir/xhat_l20000_0001.0008.out|Results/ampl_res_l0000_0001.0008.out|outdir/out_l0000_0001.0008.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0008.out outdir/xhat_l20000_0001.0008.out obj_outdir/obj_out_l0000_0001.0008.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0008.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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1.0014.out|outdir/xhat_l20000_0001.0014.out|Results/ampl_res_l0000_0001.0014.out|outdir/out_l0000_0001.0014.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0014.out outdir/xhat_l20000_0001.0014.out obj_outdir/obj_out_l0000_0001.0014.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0014.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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+2013-08-27 01:13:59,371+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=4 Cpus sleeping: 1
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0.0002.out|outdir/xhat_l20000_0000.0002.out|Results/ampl_res_l0000_0000.0002.out|outdir/out_l0000_0000.0002.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0002.out outdir/xhat_l20000_0000.0002.out obj_outdir/obj_out_l0000_0000.0002.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0002.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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+2013-08-27 01:13:59,371+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=5 Cpus sleeping: 1
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0.0003.out|outdir/xhat_l20000_0000.0003.out|Results/ampl_res_l0000_0000.0003.out|outdir/out_l0000_0000.0003.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0003.out outdir/xhat_l20000_0000.0003.out obj_outdir/obj_out_l0000_0000.0003.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0003.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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+2013-08-27 01:13:59,372+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=6 Cpus sleeping: 1
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1.0018.out|outdir/xhat_l20000_0001.0018.out|Results/ampl_res_l0000_0001.0018.out|outdir/out_l0000_0001.0018.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0018.out outdir/xhat_l20000_0001.0018.out obj_outdir/obj_out_l0000_0001.0018.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0018.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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+2013-08-27 01:13:59,372+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=7 Cpus sleeping: 1
+2013-08-27 01:13:59,372+0000 INFO Cpu 0827-1301520-000000:7 (quality: 1.0) submitting urn:1377566031941-1377566032039-1377566032040: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0001.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0001.out|outdir/xhat_l10000_000
1.0001.out|outdir/xhat_l20000_0001.0001.out|Results/ampl_res_l0000_0001.0001.out|outdir/out_l0000_0001.0001.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0001.out outdir/xhat_l20000_0001.0001.out obj_outdir/obj_out_l0000_0001.0001.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0001.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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+2013-08-27 01:13:59,373+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=8 Cpus sleeping: 1
+2013-08-27 01:13:59,373+0000 INFO Cpu 0827-1301520-000000:8 (quality: 1.0) submitting urn:1377566031953-1377566032042-1377566032043: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0000.0005.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0000.0005.out|outdir/xhat_l10000_000
0.0005.out|outdir/xhat_l20000_0000.0005.out|Results/ampl_res_l0000_0000.0005.out|outdir/out_l0000_0000.0005.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0005.out outdir/xhat_l20000_0000.0005.out obj_outdir/obj_out_l0000_0000.0005.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0005.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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+2013-08-27 01:13:59,373+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=9 Cpus sleeping: 1
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1.0005.out|outdir/xhat_l20000_0001.0005.out|Results/ampl_res_l0000_0001.0005.out|outdir/out_l0000_0001.0005.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0005.out outdir/xhat_l20000_0001.0005.out obj_outdir/obj_out_l0000_0001.0005.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0005.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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+2013-08-27 01:13:59,374+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=10 Cpus sleeping: 1
+2013-08-27 01:13:59,374+0000 INFO Cpu 0827-1301520-000000:10 (quality: 1.0) submitting urn:1377566031957-1377566032048-1377566032049: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0017.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0017.out|outdir/xhat_l10000_00
01.0017.out|outdir/xhat_l20000_0001.0017.out|Results/ampl_res_l0000_0001.0017.out|outdir/out_l0000_0001.0017.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0017.out outdir/xhat_l20000_0001.0017.out obj_outdir/obj_out_l0000_0001.0017.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0017.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:13:59,374+0000 INFO RequestHandler Handler(tag: 34, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,374+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=11 Cpus sleeping: 1
+2013-08-27 01:13:59,374+0000 INFO Cpu 0827-1301520-000000:11 (quality: 1.0) submitting urn:1377566031958-1377566032051-1377566032052: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0006.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0006.out|outdir/xhat_l10000_00
01.0006.out|outdir/xhat_l20000_0001.0006.out|Results/ampl_res_l0000_0001.0006.out|outdir/out_l0000_0001.0006.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0006.out outdir/xhat_l20000_0001.0006.out obj_outdir/obj_out_l0000_0001.0006.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0006.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:13:59,374+0000 INFO RequestHandler Handler(tag: 35, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,375+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=12 Cpus sleeping: 1
+2013-08-27 01:13:59,375+0000 INFO Cpu 0827-1301520-000000:12 (quality: 1.0) submitting urn:1377566031962-1377566032054-1377566032055: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0019.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0019.out|outdir/xhat_l10000_00
01.0019.out|outdir/xhat_l20000_0001.0019.out|Results/ampl_res_l0000_0001.0019.out|outdir/out_l0000_0001.0019.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0019.out outdir/xhat_l20000_0001.0019.out obj_outdir/obj_out_l0000_0001.0019.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0019.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:13:59,375+0000 INFO RequestHandler Handler(tag: 36, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,375+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=13 Cpus sleeping: 1
+2013-08-27 01:13:59,375+0000 INFO Cpu 0827-1301520-000000:13 (quality: 1.0) submitting urn:1377566031963-1377566032057-1377566032058: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0004.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0004.out|outdir/xhat_l10000_00
01.0004.out|outdir/xhat_l20000_0001.0004.out|Results/ampl_res_l0000_0001.0004.out|outdir/out_l0000_0001.0004.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0004.out outdir/xhat_l20000_0001.0004.out obj_outdir/obj_out_l0000_0001.0004.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0004.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:13:59,375+0000 INFO RequestHandler Handler(tag: 37, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,375+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=14 Cpus sleeping: 1
+2013-08-27 01:13:59,376+0000 INFO Cpu 0827-1301520-000000:14 (quality: 1.0) submitting urn:1377566031964-1377566032060-1377566032061: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0000.0006.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0000.0006.out|outdir/xhat_l10000_00
00.0006.out|outdir/xhat_l20000_0000.0006.out|Results/ampl_res_l0000_0000.0006.out|outdir/out_l0000_0000.0006.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0006.out outdir/xhat_l20000_0000.0006.out obj_outdir/obj_out_l0000_0000.0006.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0006.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:13:59,376+0000 INFO RequestHandler Handler(tag: 38, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,376+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=15 Cpus sleeping: 1
+2013-08-27 01:13:59,376+0000 INFO Cpu 0827-1301520-000000:15 (quality: 1.0) submitting urn:1377566031966-1377566032063-1377566032064: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0000.0007.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0000.0007.out|outdir/xhat_l10000_00
00.0007.out|outdir/xhat_l20000_0000.0007.out|Results/ampl_res_l0000_0000.0007.out|outdir/out_l0000_0000.0007.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0007.out outdir/xhat_l20000_0000.0007.out obj_outdir/obj_out_l0000_0000.0007.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0007.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:13:59,376+0000 INFO RequestHandler Handler(tag: 39, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,381+0000 INFO GetFileHandler Handler(tag: 2539, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,381+0000 INFO GetFileHandler Handler(tag: 2539, GET) -> 40
+2013-08-27 01:13:59,381+0000 INFO GetFileHandler Handler(tag: 40, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,382+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,383+0000 INFO RequestHandler Handler(tag: 3003, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,383+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,383+0000 INFO RequestHandler Handler(tag: 2540, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,383+0000 INFO GetFileHandler Handler(tag: 40, GET) reader: LR-Handler(tag: 40, GET)
+2013-08-27 01:13:59,383+0000 INFO GetFileHandler Handler(tag: 40, GET) sending length: 1925, 579976243
+2013-08-27 01:13:59,383+0000 INFO GetFileHandler Handler(tag: 2539, GET) sending length: 1925, 232442368
+2013-08-27 01:13:59,383+0000 INFO GetFileHandler Handler(tag: 3004, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,383+0000 INFO GetFileHandler Handler(tag: 3004, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,383+0000 INFO GetFileHandler Handler(tag: 3004, GET) -> 45
+2013-08-27 01:13:59,383+0000 INFO GetFileHandler Handler(tag: 2541, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,383+0000 INFO GetFileHandler Handler(tag: 2541, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,383+0000 INFO GetFileHandler Handler(tag: 2541, GET) -> 46
+2013-08-27 01:13:59,384+0000 INFO ReadBuffer RB-LR-Handler(tag: 40, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,384+0000 INFO ReadBuffer RB-LR-Handler(tag: 40, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,384+0000 INFO LocalIOProvider LR-Handler(tag: 40, GET) rbuf: RB-LR-Handler(tag: 40, GET)
+2013-08-27 01:13:59,384+0000 INFO Buffers I allocated buffers: {RB-LR-Handler(tag: 40, GET) -> 1} (1)
+2013-08-27 01:13:59,384+0000 INFO RequestHandler Handler(tag: 41, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,384+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,385+0000 INFO RequestHandler Handler(tag: 3005, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,385+0000 INFO RequestHandler Handler(tag: 42, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,385+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,385+0000 INFO RequestHandler Handler(tag: 43, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,385+0000 INFO RequestHandler Handler(tag: 2542, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,385+0000 INFO RequestHandler Handler(tag: 44, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,385+0000 INFO GetFileHandler Handler(tag: 40, GET) unregistering (last)
+2013-08-27 01:13:59,385+0000 INFO GetFileHandler Handler(tag: 45, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,386+0000 INFO ReadBuffer RB-LR-Handler(tag: 40, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,386+0000 INFO GetFileHandler Handler(tag: 45, GET) reader: LR-Handler(tag: 45, GET)
+2013-08-27 01:13:59,386+0000 INFO Buffers O allocated buffers: {POW-Command(tag: -1, GET) -> 1} (1)
+2013-08-27 01:13:59,386+0000 INFO GetFileHandler Handler(tag: 45, GET) sending length: 1925, 2474267
+2013-08-27 01:13:59,386+0000 INFO GetFileHandler Handler(tag: 2539, GET) unregistering (last)
+2013-08-27 01:13:59,386+0000 INFO ReadBuffer RB-LR-Handler(tag: 45, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,386+0000 INFO GetFileHandler Handler(tag: 3006, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,386+0000 INFO GetFileHandler Handler(tag: 3004, GET) sending length: 1925, 673733348
+2013-08-27 01:13:59,386+0000 INFO ReadBuffer RB-LR-Handler(tag: 45, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,386+0000 INFO LocalIOProvider LR-Handler(tag: 45, GET) rbuf: RB-LR-Handler(tag: 45, GET)
+2013-08-27 01:13:59,386+0000 INFO GetFileHandler Handler(tag: 3006, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,386+0000 INFO GetFileHandler Handler(tag: 45, GET) unregistering (last)
+2013-08-27 01:13:59,386+0000 INFO GetFileHandler Handler(tag: 3006, GET) -> 51
+2013-08-27 01:13:59,386+0000 INFO ReadBuffer RB-LR-Handler(tag: 45, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,386+0000 INFO GetFileHandler Handler(tag: 3004, GET) unregistering (last)
+2013-08-27 01:13:59,386+0000 INFO GetFileHandler Handler(tag: 46, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,386+0000 INFO GetFileHandler Handler(tag: 2543, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,386+0000 INFO GetFileHandler Handler(tag: 46, GET) reader: LR-Handler(tag: 46, GET)
+2013-08-27 01:13:59,386+0000 INFO GetFileHandler Handler(tag: 2543, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,386+0000 INFO GetFileHandler Handler(tag: 46, GET) sending length: 1925, 1460675721
+2013-08-27 01:13:59,386+0000 INFO GetFileHandler Handler(tag: 2543, GET) -> 52
+2013-08-27 01:13:59,386+0000 INFO ReadBuffer RB-LR-Handler(tag: 46, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,386+0000 INFO GetFileHandler Handler(tag: 2541, GET) sending length: 1925, 1691273990
+2013-08-27 01:13:59,386+0000 INFO ReadBuffer RB-LR-Handler(tag: 46, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,386+0000 INFO LocalIOProvider LR-Handler(tag: 46, GET) rbuf: RB-LR-Handler(tag: 46, GET)
+2013-08-27 01:13:59,386+0000 INFO GetFileHandler Handler(tag: 46, GET) unregistering (last)
+2013-08-27 01:13:59,387+0000 INFO ReadBuffer RB-LR-Handler(tag: 46, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,387+0000 INFO GetFileHandler Handler(tag: 2541, GET) unregistering (last)
+2013-08-27 01:13:59,387+0000 INFO RequestHandler Handler(tag: 47, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,387+0000 INFO RequestHandler Handler(tag: 48, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,387+0000 INFO RequestHandler Handler(tag: 49, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,387+0000 INFO RequestHandler Handler(tag: 50, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,387+0000 INFO GetFileHandler Handler(tag: 51, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,387+0000 INFO GetFileHandler Handler(tag: 51, GET) reader: LR-Handler(tag: 51, GET)
+2013-08-27 01:13:59,387+0000 INFO GetFileHandler Handler(tag: 51, GET) sending length: 1925, 1032247301
+2013-08-27 01:13:59,387+0000 INFO GetFileHandler Handler(tag: 3006, GET) sending length: 1925, 1607487441
+2013-08-27 01:13:59,387+0000 INFO ReadBuffer RB-LR-Handler(tag: 51, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,387+0000 INFO ReadBuffer RB-LR-Handler(tag: 51, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,388+0000 INFO LocalIOProvider LR-Handler(tag: 51, GET) rbuf: RB-LR-Handler(tag: 51, GET)
+2013-08-27 01:13:59,388+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,388+0000 INFO GetFileHandler Handler(tag: 51, GET) unregistering (last)
+2013-08-27 01:13:59,388+0000 INFO RequestHandler Handler(tag: 3007, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,388+0000 INFO ReadBuffer RB-LR-Handler(tag: 51, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,388+0000 INFO GetFileHandler Handler(tag: 52, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,388+0000 INFO GetFileHandler Handler(tag: 3006, GET) unregistering (last)
+2013-08-27 01:13:59,388+0000 INFO GetFileHandler Handler(tag: 52, GET) reader: LR-Handler(tag: 52, GET)
+2013-08-27 01:13:59,388+0000 INFO GetFileHandler Handler(tag: 52, GET) sending length: 1925, 895071792
+2013-08-27 01:13:59,388+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,388+0000 INFO GetFileHandler Handler(tag: 2543, GET) sending length: 1925, 1034567771
+2013-08-27 01:13:59,388+0000 INFO ReadBuffer RB-LR-Handler(tag: 52, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,388+0000 INFO ReadBuffer RB-LR-Handler(tag: 52, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,388+0000 INFO RequestHandler Handler(tag: 2544, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,388+0000 INFO LocalIOProvider LR-Handler(tag: 52, GET) rbuf: RB-LR-Handler(tag: 52, GET)
+2013-08-27 01:13:59,388+0000 INFO GetFileHandler Handler(tag: 52, GET) unregistering (last)
+2013-08-27 01:13:59,388+0000 INFO ReadBuffer RB-LR-Handler(tag: 52, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,388+0000 INFO GetFileHandler Handler(tag: 2543, GET) unregistering (last)
+2013-08-27 01:13:59,388+0000 INFO RequestHandler Handler(tag: 53, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,388+0000 INFO RequestHandler Handler(tag: 54, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,389+0000 INFO GetFileHandler Handler(tag: 3008, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,389+0000 INFO RequestHandler Handler(tag: 55, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,389+0000 INFO GetFileHandler Handler(tag: 3008, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,389+0000 INFO GetFileHandler Handler(tag: 3008, GET) -> 57
+2013-08-27 01:13:59,389+0000 INFO RequestHandler Handler(tag: 56, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,389+0000 INFO GetFileHandler Handler(tag: 2545, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,389+0000 INFO GetFileHandler Handler(tag: 2545, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,389+0000 INFO GetFileHandler Handler(tag: 57, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,389+0000 INFO GetFileHandler Handler(tag: 2545, GET) -> 58
+2013-08-27 01:13:59,389+0000 INFO GetFileHandler Handler(tag: 57, GET) reader: LR-Handler(tag: 57, GET)
+2013-08-27 01:13:59,389+0000 INFO GetFileHandler Handler(tag: 57, GET) sending length: 1925, 1292849429
+2013-08-27 01:13:59,389+0000 INFO GetFileHandler Handler(tag: 3008, GET) sending length: 1925, 680812857
+2013-08-27 01:13:59,389+0000 INFO ReadBuffer RB-LR-Handler(tag: 57, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,389+0000 INFO ReadBuffer RB-LR-Handler(tag: 57, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,389+0000 INFO LocalIOProvider LR-Handler(tag: 57, GET) rbuf: RB-LR-Handler(tag: 57, GET)
+2013-08-27 01:13:59,389+0000 INFO GetFileHandler Handler(tag: 57, GET) unregistering (last)
+2013-08-27 01:13:59,389+0000 INFO GetFileHandler Handler(tag: 58, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,390+0000 INFO ReadBuffer RB-LR-Handler(tag: 57, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,390+0000 INFO GetFileHandler Handler(tag: 3008, GET) unregistering (last)
+2013-08-27 01:13:59,390+0000 INFO GetFileHandler Handler(tag: 58, GET) reader: LR-Handler(tag: 58, GET)
+2013-08-27 01:13:59,390+0000 INFO GetFileHandler Handler(tag: 58, GET) sending length: 1925, 515737837
+2013-08-27 01:13:59,390+0000 INFO GetFileHandler Handler(tag: 2545, GET) sending length: 1925, 1062047763
+2013-08-27 01:13:59,390+0000 INFO ReadBuffer RB-LR-Handler(tag: 58, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,390+0000 INFO ReadBuffer RB-LR-Handler(tag: 58, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,390+0000 INFO LocalIOProvider LR-Handler(tag: 58, GET) rbuf: RB-LR-Handler(tag: 58, GET)
+2013-08-27 01:13:59,390+0000 INFO GetFileHandler Handler(tag: 58, GET) unregistering (last)
+2013-08-27 01:13:59,390+0000 INFO ReadBuffer RB-LR-Handler(tag: 58, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,390+0000 INFO GetFileHandler Handler(tag: 2545, GET) unregistering (last)
+2013-08-27 01:13:59,390+0000 INFO RequestHandler Handler(tag: 59, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,390+0000 INFO RequestHandler Handler(tag: 60, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,390+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,391+0000 INFO RequestHandler Handler(tag: 3009, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,391+0000 INFO RequestHandler Handler(tag: 61, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,391+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,391+0000 INFO RequestHandler Handler(tag: 2546, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,391+0000 INFO RequestHandler Handler(tag: 62, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,391+0000 INFO GetFileHandler Handler(tag: 3010, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,391+0000 INFO GetFileHandler Handler(tag: 3010, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,391+0000 INFO GetFileHandler Handler(tag: 3010, GET) -> 63
+2013-08-27 01:13:59,391+0000 INFO GetFileHandler Handler(tag: 63, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,391+0000 INFO GetFileHandler Handler(tag: 2547, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,391+0000 INFO GetFileHandler Handler(tag: 2547, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,392+0000 INFO GetFileHandler Handler(tag: 63, GET) reader: LR-Handler(tag: 63, GET)
+2013-08-27 01:13:59,392+0000 INFO GetFileHandler Handler(tag: 2547, GET) -> 64
+2013-08-27 01:13:59,392+0000 INFO GetFileHandler Handler(tag: 63, GET) sending length: 1925, 393903022
+2013-08-27 01:13:59,392+0000 INFO GetFileHandler Handler(tag: 3010, GET) sending length: 1925, 1783490700
+2013-08-27 01:13:59,392+0000 INFO ReadBuffer RB-LR-Handler(tag: 63, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,392+0000 INFO ReadBuffer RB-LR-Handler(tag: 63, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,392+0000 INFO LocalIOProvider LR-Handler(tag: 63, GET) rbuf: RB-LR-Handler(tag: 63, GET)
+2013-08-27 01:13:59,392+0000 INFO GetFileHandler Handler(tag: 63, GET) unregistering (last)
+2013-08-27 01:13:59,392+0000 INFO GetFileHandler Handler(tag: 64, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,392+0000 INFO ReadBuffer RB-LR-Handler(tag: 63, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,392+0000 INFO GetFileHandler Handler(tag: 3010, GET) unregistering (last)
+2013-08-27 01:13:59,392+0000 INFO GetFileHandler Handler(tag: 64, GET) reader: LR-Handler(tag: 64, GET)
+2013-08-27 01:13:59,392+0000 INFO GetFileHandler Handler(tag: 64, GET) sending length: 1925, 1951428684
+2013-08-27 01:13:59,392+0000 INFO ReadBuffer RB-LR-Handler(tag: 64, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,392+0000 INFO GetFileHandler Handler(tag: 2547, GET) sending length: 1925, 1104772279
+2013-08-27 01:13:59,392+0000 INFO ReadBuffer RB-LR-Handler(tag: 64, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,392+0000 INFO LocalIOProvider LR-Handler(tag: 64, GET) rbuf: RB-LR-Handler(tag: 64, GET)
+2013-08-27 01:13:59,392+0000 INFO GetFileHandler Handler(tag: 64, GET) unregistering (last)
+2013-08-27 01:13:59,392+0000 INFO ReadBuffer RB-LR-Handler(tag: 64, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,392+0000 INFO GetFileHandler Handler(tag: 2547, GET) unregistering (last)
+2013-08-27 01:13:59,392+0000 INFO RequestHandler Handler(tag: 65, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,393+0000 INFO RequestHandler Handler(tag: 66, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,393+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,393+0000 INFO RequestHandler Handler(tag: 3011, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,393+0000 INFO RequestHandler Handler(tag: 67, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,393+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,393+0000 INFO RequestHandler Handler(tag: 2548, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,393+0000 INFO RequestHandler Handler(tag: 68, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,394+0000 INFO GetFileHandler Handler(tag: 3012, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,394+0000 INFO GetFileHandler Handler(tag: 3012, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,394+0000 INFO GetFileHandler Handler(tag: 3012, GET) -> 69
+2013-08-27 01:13:59,394+0000 INFO GetFileHandler Handler(tag: 69, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,394+0000 INFO GetFileHandler Handler(tag: 2549, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,394+0000 INFO GetFileHandler Handler(tag: 2549, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,394+0000 INFO GetFileHandler Handler(tag: 69, GET) reader: LR-Handler(tag: 69, GET)
+2013-08-27 01:13:59,394+0000 INFO GetFileHandler Handler(tag: 2549, GET) -> 70
+2013-08-27 01:13:59,394+0000 INFO GetFileHandler Handler(tag: 69, GET) sending length: 1925, 1280890835
+2013-08-27 01:13:59,394+0000 INFO ReadBuffer RB-LR-Handler(tag: 69, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,394+0000 INFO GetFileHandler Handler(tag: 3012, GET) sending length: 1925, 1556186317
+2013-08-27 01:13:59,394+0000 INFO ReadBuffer RB-LR-Handler(tag: 69, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,394+0000 INFO LocalIOProvider LR-Handler(tag: 69, GET) rbuf: RB-LR-Handler(tag: 69, GET)
+2013-08-27 01:13:59,394+0000 INFO GetFileHandler Handler(tag: 69, GET) unregistering (last)
+2013-08-27 01:13:59,394+0000 INFO GetFileHandler Handler(tag: 70, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,394+0000 INFO ReadBuffer RB-LR-Handler(tag: 69, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,394+0000 INFO GetFileHandler Handler(tag: 3012, GET) unregistering (last)
+2013-08-27 01:13:59,394+0000 INFO GetFileHandler Handler(tag: 70, GET) reader: LR-Handler(tag: 70, GET)
+2013-08-27 01:13:59,395+0000 INFO GetFileHandler Handler(tag: 70, GET) sending length: 1925, 757303999
+2013-08-27 01:13:59,395+0000 INFO GetFileHandler Handler(tag: 2549, GET) sending length: 1925, 102017729
+2013-08-27 01:13:59,395+0000 INFO ReadBuffer RB-LR-Handler(tag: 70, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,395+0000 INFO ReadBuffer RB-LR-Handler(tag: 70, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,395+0000 INFO LocalIOProvider LR-Handler(tag: 70, GET) rbuf: RB-LR-Handler(tag: 70, GET)
+2013-08-27 01:13:59,395+0000 INFO GetFileHandler Handler(tag: 70, GET) unregistering (last)
+2013-08-27 01:13:59,395+0000 INFO GetFileHandler Handler(tag: 2549, GET) unregistering (last)
+2013-08-27 01:13:59,395+0000 INFO ReadBuffer RB-LR-Handler(tag: 70, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,395+0000 INFO RequestHandler Handler(tag: 71, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,395+0000 INFO RequestHandler Handler(tag: 72, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,395+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,395+0000 INFO RequestHandler Handler(tag: 3013, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,396+0000 INFO RequestHandler Handler(tag: 73, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,396+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,396+0000 INFO RequestHandler Handler(tag: 2550, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,396+0000 INFO RequestHandler Handler(tag: 74, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,396+0000 INFO GetFileHandler Handler(tag: 3014, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,396+0000 INFO GetFileHandler Handler(tag: 3014, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,396+0000 INFO GetFileHandler Handler(tag: 3014, GET) -> 75
+2013-08-27 01:13:59,396+0000 INFO GetFileHandler Handler(tag: 75, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,396+0000 INFO GetFileHandler Handler(tag: 2551, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,396+0000 INFO GetFileHandler Handler(tag: 75, GET) reader: LR-Handler(tag: 75, GET)
+2013-08-27 01:13:59,396+0000 INFO GetFileHandler Handler(tag: 2551, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,396+0000 INFO GetFileHandler Handler(tag: 75, GET) sending length: 1925, 2111640038
+2013-08-27 01:13:59,396+0000 INFO GetFileHandler Handler(tag: 2551, GET) -> 76
+2013-08-27 01:13:59,396+0000 INFO GetFileHandler Handler(tag: 3014, GET) sending length: 1925, 1019368344
+2013-08-27 01:13:59,396+0000 INFO ReadBuffer RB-LR-Handler(tag: 75, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,396+0000 INFO ReadBuffer RB-LR-Handler(tag: 75, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,396+0000 INFO LocalIOProvider LR-Handler(tag: 75, GET) rbuf: RB-LR-Handler(tag: 75, GET)
+2013-08-27 01:13:59,396+0000 INFO GetFileHandler Handler(tag: 75, GET) unregistering (last)
+2013-08-27 01:13:59,397+0000 INFO ReadBuffer RB-LR-Handler(tag: 75, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,397+0000 INFO GetFileHandler Handler(tag: 3014, GET) unregistering (last)
+2013-08-27 01:13:59,397+0000 INFO GetFileHandler Handler(tag: 76, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,397+0000 INFO GetFileHandler Handler(tag: 76, GET) reader: LR-Handler(tag: 76, GET)
+2013-08-27 01:13:59,397+0000 INFO GetFileHandler Handler(tag: 76, GET) sending length: 1925, 822207122
+2013-08-27 01:13:59,397+0000 INFO ReadBuffer RB-LR-Handler(tag: 76, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,397+0000 INFO GetFileHandler Handler(tag: 2551, GET) sending length: 1925, 2091003888
+2013-08-27 01:13:59,397+0000 INFO ReadBuffer RB-LR-Handler(tag: 76, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,397+0000 INFO LocalIOProvider LR-Handler(tag: 76, GET) rbuf: RB-LR-Handler(tag: 76, GET)
+2013-08-27 01:13:59,397+0000 INFO GetFileHandler Handler(tag: 76, GET) unregistering (last)
+2013-08-27 01:13:59,397+0000 INFO ReadBuffer RB-LR-Handler(tag: 76, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,397+0000 INFO GetFileHandler Handler(tag: 2551, GET) unregistering (last)
+2013-08-27 01:13:59,397+0000 INFO RequestHandler Handler(tag: 77, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,397+0000 INFO RequestHandler Handler(tag: 78, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,398+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,398+0000 INFO RequestHandler Handler(tag: 3015, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,398+0000 INFO RequestHandler Handler(tag: 79, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,398+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,398+0000 INFO RequestHandler Handler(tag: 2552, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,398+0000 INFO RequestHandler Handler(tag: 80, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,398+0000 INFO GetFileHandler Handler(tag: 3016, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,398+0000 INFO GetFileHandler Handler(tag: 3016, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,398+0000 INFO GetFileHandler Handler(tag: 3016, GET) -> 81
+2013-08-27 01:13:59,398+0000 INFO GetFileHandler Handler(tag: 81, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,398+0000 INFO GetFileHandler Handler(tag: 2553, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,398+0000 INFO GetFileHandler Handler(tag: 2553, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,398+0000 INFO GetFileHandler Handler(tag: 81, GET) reader: LR-Handler(tag: 81, GET)
+2013-08-27 01:13:59,399+0000 INFO GetFileHandler Handler(tag: 2553, GET) -> 82
+2013-08-27 01:13:59,399+0000 INFO GetFileHandler Handler(tag: 81, GET) sending length: 1925, 1585222203
+2013-08-27 01:13:59,399+0000 INFO GetFileHandler Handler(tag: 3016, GET) sending length: 1925, 1147441139
+2013-08-27 01:13:59,399+0000 INFO ReadBuffer RB-LR-Handler(tag: 81, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,399+0000 INFO ReadBuffer RB-LR-Handler(tag: 81, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,399+0000 INFO LocalIOProvider LR-Handler(tag: 81, GET) rbuf: RB-LR-Handler(tag: 81, GET)
+2013-08-27 01:13:59,399+0000 INFO GetFileHandler Handler(tag: 81, GET) unregistering (last)
+2013-08-27 01:13:59,399+0000 INFO GetFileHandler Handler(tag: 82, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,399+0000 INFO ReadBuffer RB-LR-Handler(tag: 81, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,399+0000 INFO GetFileHandler Handler(tag: 3016, GET) unregistering (last)
+2013-08-27 01:13:59,399+0000 INFO GetFileHandler Handler(tag: 82, GET) reader: LR-Handler(tag: 82, GET)
+2013-08-27 01:13:59,399+0000 INFO GetFileHandler Handler(tag: 82, GET) sending length: 1925, 362965846
+2013-08-27 01:13:59,399+0000 INFO GetFileHandler Handler(tag: 2553, GET) sending length: 1925, 27107283
+2013-08-27 01:13:59,399+0000 INFO ReadBuffer RB-LR-Handler(tag: 82, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,399+0000 INFO ReadBuffer RB-LR-Handler(tag: 82, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,399+0000 INFO LocalIOProvider LR-Handler(tag: 82, GET) rbuf: RB-LR-Handler(tag: 82, GET)
+2013-08-27 01:13:59,399+0000 INFO GetFileHandler Handler(tag: 82, GET) unregistering (last)
+2013-08-27 01:13:59,399+0000 INFO ReadBuffer RB-LR-Handler(tag: 82, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,399+0000 INFO GetFileHandler Handler(tag: 2553, GET) unregistering (last)
+2013-08-27 01:13:59,399+0000 INFO RequestHandler Handler(tag: 83, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,400+0000 INFO RequestHandler Handler(tag: 84, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,400+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,400+0000 INFO RequestHandler Handler(tag: 3017, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,400+0000 INFO RequestHandler Handler(tag: 85, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,400+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,400+0000 INFO RequestHandler Handler(tag: 2554, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,400+0000 INFO RequestHandler Handler(tag: 86, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,400+0000 INFO GetFileHandler Handler(tag: 3018, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,400+0000 INFO GetFileHandler Handler(tag: 3018, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,401+0000 INFO GetFileHandler Handler(tag: 3018, GET) -> 87
+2013-08-27 01:13:59,401+0000 INFO GetFileHandler Handler(tag: 87, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,401+0000 INFO GetFileHandler Handler(tag: 2555, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,401+0000 INFO GetFileHandler Handler(tag: 2555, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,401+0000 INFO GetFileHandler Handler(tag: 87, GET) reader: LR-Handler(tag: 87, GET)
+2013-08-27 01:13:59,401+0000 INFO GetFileHandler Handler(tag: 2555, GET) -> 88
+2013-08-27 01:13:59,401+0000 INFO GetFileHandler Handler(tag: 87, GET) sending length: 1925, 1958960935
+2013-08-27 01:13:59,401+0000 INFO GetFileHandler Handler(tag: 3018, GET) sending length: 1925, 1184642388
+2013-08-27 01:13:59,401+0000 INFO ReadBuffer RB-LR-Handler(tag: 87, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,401+0000 INFO ReadBuffer RB-LR-Handler(tag: 87, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,401+0000 INFO LocalIOProvider LR-Handler(tag: 87, GET) rbuf: RB-LR-Handler(tag: 87, GET)
+2013-08-27 01:13:59,401+0000 INFO GetFileHandler Handler(tag: 87, GET) unregistering (last)
+2013-08-27 01:13:59,401+0000 INFO GetFileHandler Handler(tag: 88, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,401+0000 INFO ReadBuffer RB-LR-Handler(tag: 87, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,401+0000 INFO GetFileHandler Handler(tag: 3018, GET) unregistering (last)
+2013-08-27 01:13:59,401+0000 INFO GetFileHandler Handler(tag: 88, GET) reader: LR-Handler(tag: 88, GET)
+2013-08-27 01:13:59,401+0000 INFO GetFileHandler Handler(tag: 88, GET) sending length: 1925, 11877363
+2013-08-27 01:13:59,401+0000 INFO ReadBuffer RB-LR-Handler(tag: 88, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,401+0000 INFO GetFileHandler Handler(tag: 2555, GET) sending length: 1925, 229464416
+2013-08-27 01:13:59,401+0000 INFO ReadBuffer RB-LR-Handler(tag: 88, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,401+0000 INFO LocalIOProvider LR-Handler(tag: 88, GET) rbuf: RB-LR-Handler(tag: 88, GET)
+2013-08-27 01:13:59,401+0000 INFO GetFileHandler Handler(tag: 88, GET) unregistering (last)
+2013-08-27 01:13:59,401+0000 INFO ReadBuffer RB-LR-Handler(tag: 88, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,401+0000 INFO RequestHandler Handler(tag: 89, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,401+0000 INFO GetFileHandler Handler(tag: 2555, GET) unregistering (last)
+2013-08-27 01:13:59,402+0000 INFO RequestHandler Handler(tag: 90, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,402+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,402+0000 INFO RequestHandler Handler(tag: 3019, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,402+0000 INFO RequestHandler Handler(tag: 91, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,402+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,402+0000 INFO RequestHandler Handler(tag: 2556, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,402+0000 INFO RequestHandler Handler(tag: 92, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,403+0000 INFO GetFileHandler Handler(tag: 3020, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,403+0000 INFO GetFileHandler Handler(tag: 3020, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,403+0000 INFO GetFileHandler Handler(tag: 3020, GET) -> 93
+2013-08-27 01:13:59,403+0000 INFO GetFileHandler Handler(tag: 93, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,403+0000 INFO GetFileHandler Handler(tag: 2557, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,403+0000 INFO GetFileHandler Handler(tag: 2557, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,403+0000 INFO GetFileHandler Handler(tag: 93, GET) reader: LR-Handler(tag: 93, GET)
+2013-08-27 01:13:59,403+0000 INFO GetFileHandler Handler(tag: 2557, GET) -> 94
+2013-08-27 01:13:59,403+0000 INFO GetFileHandler Handler(tag: 93, GET) sending length: 1925, 1724859291
+2013-08-27 01:13:59,403+0000 INFO GetFileHandler Handler(tag: 3020, GET) sending length: 1925, 828352984
+2013-08-27 01:13:59,403+0000 INFO ReadBuffer RB-LR-Handler(tag: 93, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,403+0000 INFO ReadBuffer RB-LR-Handler(tag: 93, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,403+0000 INFO LocalIOProvider LR-Handler(tag: 93, GET) rbuf: RB-LR-Handler(tag: 93, GET)
+2013-08-27 01:13:59,403+0000 INFO GetFileHandler Handler(tag: 93, GET) unregistering (last)
+2013-08-27 01:13:59,403+0000 INFO GetFileHandler Handler(tag: 94, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,403+0000 INFO GetFileHandler Handler(tag: 3020, GET) unregistering (last)
+2013-08-27 01:13:59,403+0000 INFO ReadBuffer RB-LR-Handler(tag: 93, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,403+0000 INFO GetFileHandler Handler(tag: 94, GET) reader: LR-Handler(tag: 94, GET)
+2013-08-27 01:13:59,403+0000 INFO GetFileHandler Handler(tag: 94, GET) sending length: 1925, 113324400
+2013-08-27 01:13:59,403+0000 INFO ReadBuffer RB-LR-Handler(tag: 94, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,403+0000 INFO GetFileHandler Handler(tag: 2557, GET) sending length: 1925, 1972679558
+2013-08-27 01:13:59,403+0000 INFO ReadBuffer RB-LR-Handler(tag: 94, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,403+0000 INFO LocalIOProvider LR-Handler(tag: 94, GET) rbuf: RB-LR-Handler(tag: 94, GET)
+2013-08-27 01:13:59,403+0000 INFO GetFileHandler Handler(tag: 94, GET) unregistering (last)
+2013-08-27 01:13:59,404+0000 INFO ReadBuffer RB-LR-Handler(tag: 94, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,404+0000 INFO GetFileHandler Handler(tag: 2557, GET) unregistering (last)
+2013-08-27 01:13:59,404+0000 INFO RequestHandler Handler(tag: 95, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,404+0000 INFO RequestHandler Handler(tag: 96, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,404+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,404+0000 INFO RequestHandler Handler(tag: 3021, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,404+0000 INFO RequestHandler Handler(tag: 97, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,404+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,404+0000 INFO RequestHandler Handler(tag: 2558, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,405+0000 INFO RequestHandler Handler(tag: 98, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,405+0000 INFO GetFileHandler Handler(tag: 3022, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,405+0000 INFO GetFileHandler Handler(tag: 3022, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,405+0000 INFO GetFileHandler Handler(tag: 3022, GET) -> 99
+2013-08-27 01:13:59,405+0000 INFO GetFileHandler Handler(tag: 99, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,405+0000 INFO GetFileHandler Handler(tag: 2559, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,405+0000 INFO GetFileHandler Handler(tag: 2559, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,405+0000 INFO GetFileHandler Handler(tag: 99, GET) reader: LR-Handler(tag: 99, GET)
+2013-08-27 01:13:59,405+0000 INFO GetFileHandler Handler(tag: 2559, GET) -> 100
+2013-08-27 01:13:59,405+0000 INFO GetFileHandler Handler(tag: 99, GET) sending length: 1925, 1266137668
+2013-08-27 01:13:59,405+0000 INFO ReadBuffer RB-LR-Handler(tag: 99, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,405+0000 INFO GetFileHandler Handler(tag: 3022, GET) sending length: 1925, 560327953
+2013-08-27 01:13:59,405+0000 INFO ReadBuffer RB-LR-Handler(tag: 99, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,405+0000 INFO LocalIOProvider LR-Handler(tag: 99, GET) rbuf: RB-LR-Handler(tag: 99, GET)
+2013-08-27 01:13:59,405+0000 INFO GetFileHandler Handler(tag: 99, GET) unregistering (last)
+2013-08-27 01:13:59,405+0000 INFO GetFileHandler Handler(tag: 100, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,406+0000 INFO ReadBuffer RB-LR-Handler(tag: 99, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,406+0000 INFO GetFileHandler Handler(tag: 3022, GET) unregistering (last)
+2013-08-27 01:13:59,406+0000 INFO GetFileHandler Handler(tag: 100, GET) reader: LR-Handler(tag: 100, GET)
+2013-08-27 01:13:59,406+0000 INFO GetFileHandler Handler(tag: 100, GET) sending length: 1925, 861309059
+2013-08-27 01:13:59,406+0000 INFO ReadBuffer RB-LR-Handler(tag: 100, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,406+0000 INFO GetFileHandler Handler(tag: 2559, GET) sending length: 1925, 1981573833
+2013-08-27 01:13:59,406+0000 INFO ReadBuffer RB-LR-Handler(tag: 100, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,406+0000 INFO LocalIOProvider LR-Handler(tag: 100, GET) rbuf: RB-LR-Handler(tag: 100, GET)
+2013-08-27 01:13:59,406+0000 INFO GetFileHandler Handler(tag: 100, GET) unregistering (last)
+2013-08-27 01:13:59,406+0000 INFO GetFileHandler Handler(tag: 2559, GET) unregistering (last)
+2013-08-27 01:13:59,406+0000 INFO ReadBuffer RB-LR-Handler(tag: 100, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,406+0000 INFO RequestHandler Handler(tag: 101, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,406+0000 INFO RequestHandler Handler(tag: 102, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,407+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,407+0000 INFO RequestHandler Handler(tag: 3023, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,407+0000 INFO RequestHandler Handler(tag: 103, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,407+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,407+0000 INFO RequestHandler Handler(tag: 2560, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,407+0000 INFO RequestHandler Handler(tag: 104, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,407+0000 INFO GetFileHandler Handler(tag: 3024, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,407+0000 INFO GetFileHandler Handler(tag: 3024, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,407+0000 INFO GetFileHandler Handler(tag: 3024, GET) -> 105
+2013-08-27 01:13:59,407+0000 INFO GetFileHandler Handler(tag: 105, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,407+0000 INFO GetFileHandler Handler(tag: 2561, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,407+0000 INFO GetFileHandler Handler(tag: 2561, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,407+0000 INFO GetFileHandler Handler(tag: 105, GET) reader: LR-Handler(tag: 105, GET)
+2013-08-27 01:13:59,407+0000 INFO GetFileHandler Handler(tag: 2561, GET) -> 106
+2013-08-27 01:13:59,407+0000 INFO GetFileHandler Handler(tag: 105, GET) sending length: 1925, 962070825
+2013-08-27 01:13:59,407+0000 INFO GetFileHandler Handler(tag: 3024, GET) sending length: 1925, 1119977512
+2013-08-27 01:13:59,407+0000 INFO ReadBuffer RB-LR-Handler(tag: 105, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,407+0000 INFO ReadBuffer RB-LR-Handler(tag: 105, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,407+0000 INFO LocalIOProvider LR-Handler(tag: 105, GET) rbuf: RB-LR-Handler(tag: 105, GET)
+2013-08-27 01:13:59,407+0000 INFO GetFileHandler Handler(tag: 105, GET) unregistering (last)
+2013-08-27 01:13:59,407+0000 INFO GetFileHandler Handler(tag: 106, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,408+0000 INFO ReadBuffer RB-LR-Handler(tag: 105, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,408+0000 INFO GetFileHandler Handler(tag: 3024, GET) unregistering (last)
+2013-08-27 01:13:59,408+0000 INFO GetFileHandler Handler(tag: 106, GET) reader: LR-Handler(tag: 106, GET)
+2013-08-27 01:13:59,408+0000 INFO GetFileHandler Handler(tag: 106, GET) sending length: 1925, 1251476784
+2013-08-27 01:13:59,408+0000 INFO GetFileHandler Handler(tag: 2561, GET) sending length: 1925, 1275442086
+2013-08-27 01:13:59,408+0000 INFO ReadBuffer RB-LR-Handler(tag: 106, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,408+0000 INFO ReadBuffer RB-LR-Handler(tag: 106, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,408+0000 INFO LocalIOProvider LR-Handler(tag: 106, GET) rbuf: RB-LR-Handler(tag: 106, GET)
+2013-08-27 01:13:59,408+0000 INFO GetFileHandler Handler(tag: 106, GET) unregistering (last)
+2013-08-27 01:13:59,408+0000 INFO ReadBuffer RB-LR-Handler(tag: 106, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,408+0000 INFO GetFileHandler Handler(tag: 2561, GET) unregistering (last)
+2013-08-27 01:13:59,408+0000 INFO RequestHandler Handler(tag: 107, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,408+0000 INFO RequestHandler Handler(tag: 108, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,408+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,408+0000 INFO RequestHandler Handler(tag: 3025, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,409+0000 INFO RequestHandler Handler(tag: 109, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,409+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,409+0000 INFO RequestHandler Handler(tag: 2562, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,409+0000 INFO RequestHandler Handler(tag: 110, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,409+0000 INFO GetFileHandler Handler(tag: 3026, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,409+0000 INFO GetFileHandler Handler(tag: 3026, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,409+0000 INFO GetFileHandler Handler(tag: 3026, GET) -> 111
+2013-08-27 01:13:59,409+0000 INFO GetFileHandler Handler(tag: 111, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,409+0000 INFO GetFileHandler Handler(tag: 2563, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,409+0000 INFO GetFileHandler Handler(tag: 2563, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,409+0000 INFO GetFileHandler Handler(tag: 111, GET) reader: LR-Handler(tag: 111, GET)
+2013-08-27 01:13:59,409+0000 INFO GetFileHandler Handler(tag: 2563, GET) -> 112
+2013-08-27 01:13:59,409+0000 INFO GetFileHandler Handler(tag: 111, GET) sending length: 1925, 943319734
+2013-08-27 01:13:59,409+0000 INFO GetFileHandler Handler(tag: 3026, GET) sending length: 1925, 1650487184
+2013-08-27 01:13:59,409+0000 INFO ReadBuffer RB-LR-Handler(tag: 111, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,409+0000 INFO ReadBuffer RB-LR-Handler(tag: 111, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,409+0000 INFO LocalIOProvider LR-Handler(tag: 111, GET) rbuf: RB-LR-Handler(tag: 111, GET)
+2013-08-27 01:13:59,409+0000 INFO GetFileHandler Handler(tag: 111, GET) unregistering (last)
+2013-08-27 01:13:59,409+0000 INFO GetFileHandler Handler(tag: 112, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,409+0000 INFO ReadBuffer RB-LR-Handler(tag: 111, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,409+0000 INFO GetFileHandler Handler(tag: 3026, GET) unregistering (last)
+2013-08-27 01:13:59,409+0000 INFO GetFileHandler Handler(tag: 112, GET) reader: LR-Handler(tag: 112, GET)
+2013-08-27 01:13:59,409+0000 INFO GetFileHandler Handler(tag: 112, GET) sending length: 1925, 1848873994
+2013-08-27 01:13:59,410+0000 INFO GetFileHandler Handler(tag: 2563, GET) sending length: 1925, 2006582799
+2013-08-27 01:13:59,410+0000 INFO ReadBuffer RB-LR-Handler(tag: 112, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,410+0000 INFO ReadBuffer RB-LR-Handler(tag: 112, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,410+0000 INFO LocalIOProvider LR-Handler(tag: 112, GET) rbuf: RB-LR-Handler(tag: 112, GET)
+2013-08-27 01:13:59,410+0000 INFO GetFileHandler Handler(tag: 112, GET) unregistering (last)
+2013-08-27 01:13:59,410+0000 INFO ReadBuffer RB-LR-Handler(tag: 112, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,410+0000 INFO GetFileHandler Handler(tag: 2563, GET) unregistering (last)
+2013-08-27 01:13:59,410+0000 INFO RequestHandler Handler(tag: 113, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,410+0000 INFO RequestHandler Handler(tag: 114, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,410+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,410+0000 INFO RequestHandler Handler(tag: 3027, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,410+0000 INFO RequestHandler Handler(tag: 115, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,410+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,410+0000 INFO RequestHandler Handler(tag: 2564, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,411+0000 INFO RequestHandler Handler(tag: 116, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,411+0000 INFO GetFileHandler Handler(tag: 3028, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,411+0000 INFO GetFileHandler Handler(tag: 3028, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,411+0000 INFO GetFileHandler Handler(tag: 3028, GET) -> 117
+2013-08-27 01:13:59,411+0000 INFO GetFileHandler Handler(tag: 117, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,411+0000 INFO GetFileHandler Handler(tag: 2565, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,411+0000 INFO GetFileHandler Handler(tag: 2565, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,411+0000 INFO GetFileHandler Handler(tag: 117, GET) reader: LR-Handler(tag: 117, GET)
+2013-08-27 01:13:59,411+0000 INFO GetFileHandler Handler(tag: 2565, GET) -> 118
+2013-08-27 01:13:59,411+0000 INFO GetFileHandler Handler(tag: 117, GET) sending length: 1925, 664712664
+2013-08-27 01:13:59,411+0000 INFO GetFileHandler Handler(tag: 3028, GET) sending length: 1925, 615812154
+2013-08-27 01:13:59,411+0000 INFO ReadBuffer RB-LR-Handler(tag: 117, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,411+0000 INFO ReadBuffer RB-LR-Handler(tag: 117, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,411+0000 INFO LocalIOProvider LR-Handler(tag: 117, GET) rbuf: RB-LR-Handler(tag: 117, GET)
+2013-08-27 01:13:59,411+0000 INFO GetFileHandler Handler(tag: 117, GET) unregistering (last)
+2013-08-27 01:13:59,411+0000 INFO GetFileHandler Handler(tag: 118, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,411+0000 INFO ReadBuffer RB-LR-Handler(tag: 117, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,411+0000 INFO GetFileHandler Handler(tag: 3028, GET) unregistering (last)
+2013-08-27 01:13:59,411+0000 INFO GetFileHandler Handler(tag: 118, GET) reader: LR-Handler(tag: 118, GET)
+2013-08-27 01:13:59,411+0000 INFO GetFileHandler Handler(tag: 118, GET) sending length: 1925, 1222518691
+2013-08-27 01:13:59,411+0000 INFO GetFileHandler Handler(tag: 2565, GET) sending length: 1925, 864373480
+2013-08-27 01:13:59,411+0000 INFO ReadBuffer RB-LR-Handler(tag: 118, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,411+0000 INFO ReadBuffer RB-LR-Handler(tag: 118, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,411+0000 INFO LocalIOProvider LR-Handler(tag: 118, GET) rbuf: RB-LR-Handler(tag: 118, GET)
+2013-08-27 01:13:59,412+0000 INFO GetFileHandler Handler(tag: 118, GET) unregistering (last)
+2013-08-27 01:13:59,412+0000 INFO ReadBuffer RB-LR-Handler(tag: 118, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,412+0000 INFO GetFileHandler Handler(tag: 2565, GET) unregistering (last)
+2013-08-27 01:13:59,412+0000 INFO RequestHandler Handler(tag: 119, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,412+0000 INFO RequestHandler Handler(tag: 120, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,412+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,412+0000 INFO RequestHandler Handler(tag: 3029, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,412+0000 INFO RequestHandler Handler(tag: 121, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,412+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,412+0000 INFO RequestHandler Handler(tag: 2566, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,412+0000 INFO RequestHandler Handler(tag: 122, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,413+0000 INFO GetFileHandler Handler(tag: 3030, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,413+0000 INFO GetFileHandler Handler(tag: 3030, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,413+0000 INFO GetFileHandler Handler(tag: 3030, GET) -> 123
+2013-08-27 01:13:59,413+0000 INFO GetFileHandler Handler(tag: 123, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,413+0000 INFO GetFileHandler Handler(tag: 2567, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,413+0000 INFO GetFileHandler Handler(tag: 2567, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,413+0000 INFO GetFileHandler Handler(tag: 123, GET) reader: LR-Handler(tag: 123, GET)
+2013-08-27 01:13:59,413+0000 INFO GetFileHandler Handler(tag: 2567, GET) -> 124
+2013-08-27 01:13:59,413+0000 INFO GetFileHandler Handler(tag: 123, GET) sending length: 1925, 200473361
+2013-08-27 01:13:59,413+0000 INFO ReadBuffer RB-LR-Handler(tag: 123, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,413+0000 INFO GetFileHandler Handler(tag: 3030, GET) sending length: 1925, 2101419831
+2013-08-27 01:13:59,413+0000 INFO ReadBuffer RB-LR-Handler(tag: 123, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,413+0000 INFO LocalIOProvider LR-Handler(tag: 123, GET) rbuf: RB-LR-Handler(tag: 123, GET)
+2013-08-27 01:13:59,413+0000 INFO GetFileHandler Handler(tag: 123, GET) unregistering (last)
+2013-08-27 01:13:59,413+0000 INFO GetFileHandler Handler(tag: 124, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,413+0000 INFO GetFileHandler Handler(tag: 3030, GET) unregistering (last)
+2013-08-27 01:13:59,413+0000 INFO ReadBuffer RB-LR-Handler(tag: 123, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,413+0000 INFO GetFileHandler Handler(tag: 124, GET) reader: LR-Handler(tag: 124, GET)
+2013-08-27 01:13:59,413+0000 INFO GetFileHandler Handler(tag: 124, GET) sending length: 1925, 1274071252
+2013-08-27 01:13:59,413+0000 INFO GetFileHandler Handler(tag: 2567, GET) sending length: 1925, 1861630750
+2013-08-27 01:13:59,413+0000 INFO ReadBuffer RB-LR-Handler(tag: 124, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,413+0000 INFO ReadBuffer RB-LR-Handler(tag: 124, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,413+0000 INFO LocalIOProvider LR-Handler(tag: 124, GET) rbuf: RB-LR-Handler(tag: 124, GET)
+2013-08-27 01:13:59,413+0000 INFO GetFileHandler Handler(tag: 124, GET) unregistering (last)
+2013-08-27 01:13:59,413+0000 INFO ReadBuffer RB-LR-Handler(tag: 124, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,413+0000 INFO GetFileHandler Handler(tag: 2567, GET) unregistering (last)
+2013-08-27 01:13:59,413+0000 INFO RequestHandler Handler(tag: 125, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,414+0000 INFO RequestHandler Handler(tag: 126, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,414+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,414+0000 INFO RequestHandler Handler(tag: 3031, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,414+0000 INFO RequestHandler Handler(tag: 127, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,414+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,414+0000 INFO RequestHandler Handler(tag: 2568, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,414+0000 INFO RequestHandler Handler(tag: 128, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,414+0000 INFO GetFileHandler Handler(tag: 3032, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,414+0000 INFO GetFileHandler Handler(tag: 3032, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,414+0000 INFO GetFileHandler Handler(tag: 3032, GET) -> 129
+2013-08-27 01:13:59,415+0000 INFO GetFileHandler Handler(tag: 129, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,415+0000 INFO GetFileHandler Handler(tag: 2569, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,415+0000 INFO GetFileHandler Handler(tag: 2569, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,415+0000 INFO GetFileHandler Handler(tag: 129, GET) reader: LR-Handler(tag: 129, GET)
+2013-08-27 01:13:59,415+0000 INFO GetFileHandler Handler(tag: 2569, GET) -> 130
+2013-08-27 01:13:59,415+0000 INFO GetFileHandler Handler(tag: 129, GET) sending length: 1925, 108063412
+2013-08-27 01:13:59,415+0000 INFO GetFileHandler Handler(tag: 3032, GET) sending length: 1925, 1598083769
+2013-08-27 01:13:59,415+0000 INFO ReadBuffer RB-LR-Handler(tag: 129, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,415+0000 INFO ReadBuffer RB-LR-Handler(tag: 129, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,415+0000 INFO LocalIOProvider LR-Handler(tag: 129, GET) rbuf: RB-LR-Handler(tag: 129, GET)
+2013-08-27 01:13:59,415+0000 INFO GetFileHandler Handler(tag: 129, GET) unregistering (last)
+2013-08-27 01:13:59,415+0000 INFO GetFileHandler Handler(tag: 130, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,415+0000 INFO ReadBuffer RB-LR-Handler(tag: 129, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,415+0000 INFO GetFileHandler Handler(tag: 3032, GET) unregistering (last)
+2013-08-27 01:13:59,415+0000 INFO GetFileHandler Handler(tag: 130, GET) reader: LR-Handler(tag: 130, GET)
+2013-08-27 01:13:59,415+0000 INFO GetFileHandler Handler(tag: 130, GET) sending length: 1925, 803246987
+2013-08-27 01:13:59,415+0000 INFO GetFileHandler Handler(tag: 2569, GET) sending length: 1925, 889755445
+2013-08-27 01:13:59,415+0000 INFO ReadBuffer RB-LR-Handler(tag: 130, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,415+0000 INFO ReadBuffer RB-LR-Handler(tag: 130, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,415+0000 INFO LocalIOProvider LR-Handler(tag: 130, GET) rbuf: RB-LR-Handler(tag: 130, GET)
+2013-08-27 01:13:59,415+0000 INFO GetFileHandler Handler(tag: 130, GET) unregistering (last)
+2013-08-27 01:13:59,415+0000 INFO ReadBuffer RB-LR-Handler(tag: 130, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,415+0000 INFO GetFileHandler Handler(tag: 2569, GET) unregistering (last)
+2013-08-27 01:13:59,415+0000 INFO GetFileHandler Handler(tag: 2570, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,415+0000 INFO RequestHandler Handler(tag: 131, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,415+0000 INFO GetFileHandler Handler(tag: 2570, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,415+0000 INFO GetFileHandler Handler(tag: 2570, GET) -> 132
+2013-08-27 01:13:59,416+0000 INFO GetFileHandler Handler(tag: 132, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,416+0000 INFO GetFileHandler Handler(tag: 132, GET) reader: LR-Handler(tag: 132, GET)
+2013-08-27 01:13:59,416+0000 INFO GetFileHandler Handler(tag: 132, GET) sending length: 14799449, 1215840334
+2013-08-27 01:13:59,416+0000 INFO ReadBuffer RB-LR-Handler(tag: 132, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,416+0000 INFO GetFileHandler Handler(tag: 2570, GET) sending length: 14799449, 1321592333
+2013-08-27 01:13:59,416+0000 INFO ReadBuffer RB-LR-Handler(tag: 132, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,416+0000 INFO LocalIOProvider LR-Handler(tag: 132, GET) rbuf: RB-LR-Handler(tag: 132, GET)
+2013-08-27 01:13:59,416+0000 INFO GetFileHandler Handler(tag: 2571, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,416+0000 INFO GetFileHandler Handler(tag: 2571, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,416+0000 INFO GetFileHandler Handler(tag: 2571, GET) -> 133
+2013-08-27 01:13:59,416+0000 INFO GetFileHandler Handler(tag: 133, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,416+0000 INFO GetFileHandler Handler(tag: 133, GET) reader: LR-Handler(tag: 133, GET)
+2013-08-27 01:13:59,416+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:13:59,416+0000 INFO GetFileHandler Handler(tag: 133, GET) sending length: 14799449, 2115195389
+2013-08-27 01:13:59,416+0000 INFO ReadBuffer RB-LR-Handler(tag: 133, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,416+0000 INFO RequestHandler Handler(tag: 3033, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,416+0000 INFO GetFileHandler Handler(tag: 2571, GET) sending length: 14799449, 2060905927
+2013-08-27 01:13:59,416+0000 INFO ReadBuffer RB-LR-Handler(tag: 133, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,416+0000 INFO LocalIOProvider LR-Handler(tag: 133, GET) rbuf: RB-LR-Handler(tag: 133, GET)
+2013-08-27 01:13:59,416+0000 INFO RequestHandler Handler(tag: 134, JOBSTATUS) unregistering (send)
+2013-08-27 01:13:59,416+0000 INFO GetFileHandler Handler(tag: 2572, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,416+0000 INFO GetFileHandler Handler(tag: 2572, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 2572, GET) -> 135
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 135, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 3034, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 135, GET) reader: LR-Handler(tag: 135, GET)
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 135, GET) sending length: 14799449, 837249672
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 3034, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,417+0000 INFO ReadBuffer RB-LR-Handler(tag: 135, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 2572, GET) sending length: 14799449, 1342382160
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 3034, GET) -> 136
+2013-08-27 01:13:59,417+0000 INFO ReadBuffer RB-LR-Handler(tag: 135, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,417+0000 INFO LocalIOProvider LR-Handler(tag: 135, GET) rbuf: RB-LR-Handler(tag: 135, GET)
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 136, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 136, GET) reader: LR-Handler(tag: 136, GET)
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 136, GET) sending length: 1925, 363452780
+2013-08-27 01:13:59,417+0000 INFO ReadBuffer RB-LR-Handler(tag: 136, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 3034, GET) sending length: 1925, 1665770442
+2013-08-27 01:13:59,417+0000 INFO ReadBuffer RB-LR-Handler(tag: 136, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:13:59,417+0000 INFO LocalIOProvider LR-Handler(tag: 136, GET) rbuf: RB-LR-Handler(tag: 136, GET)
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 2573, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 2573, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 2573, GET) -> 137
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 137, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 3035, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 137, GET) reader: LR-Handler(tag: 137, GET)
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 3035, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 137, GET) sending length: 14799449, 1062884985
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 3035, GET) -> 138
+2013-08-27 01:13:59,417+0000 INFO ReadBuffer RB-LR-Handler(tag: 137, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,417+0000 INFO ReadBuffer RB-LR-Handler(tag: 137, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,417+0000 INFO LocalIOProvider LR-Handler(tag: 137, GET) rbuf: RB-LR-Handler(tag: 137, GET)
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 2573, GET) sending length: 14799449, 2099127532
+2013-08-27 01:13:59,417+0000 INFO GetFileHandler Handler(tag: 138, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,418+0000 INFO GetFileHandler Handler(tag: 138, GET) reader: LR-Handler(tag: 138, GET)
+2013-08-27 01:13:59,418+0000 INFO GetFileHandler Handler(tag: 138, GET) sending length: 14799449, 871046072
+2013-08-27 01:13:59,418+0000 INFO ReadBuffer RB-LR-Handler(tag: 138, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,418+0000 INFO ReadBuffer RB-LR-Handler(tag: 138, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,418+0000 INFO LocalIOProvider LR-Handler(tag: 138, GET) rbuf: RB-LR-Handler(tag: 138, GET)
+2013-08-27 01:13:59,418+0000 INFO GetFileHandler Handler(tag: 2574, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,418+0000 INFO GetFileHandler Handler(tag: 3035, GET) sending length: 14799449, 1463881897
+2013-08-27 01:13:59,418+0000 INFO GetFileHandler Handler(tag: 2574, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,418+0000 INFO GetFileHandler Handler(tag: 2574, GET) -> 139
+2013-08-27 01:13:59,418+0000 INFO GetFileHandler Handler(tag: 139, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,418+0000 INFO GetFileHandler Handler(tag: 3036, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,418+0000 INFO GetFileHandler Handler(tag: 139, GET) reader: LR-Handler(tag: 139, GET)
+2013-08-27 01:13:59,418+0000 INFO GetFileHandler Handler(tag: 3036, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,418+0000 INFO GetFileHandler Handler(tag: 139, GET) sending length: 14799449, 1791435811
+2013-08-27 01:13:59,418+0000 INFO GetFileHandler Handler(tag: 3036, GET) -> 140
+2013-08-27 01:13:59,418+0000 INFO ReadBuffer RB-LR-Handler(tag: 139, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,418+0000 INFO ReadBuffer RB-LR-Handler(tag: 139, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,418+0000 INFO GetFileHandler Handler(tag: 136, GET) unregistering (last)
+2013-08-27 01:13:59,418+0000 INFO LocalIOProvider LR-Handler(tag: 139, GET) rbuf: RB-LR-Handler(tag: 139, GET)
+2013-08-27 01:13:59,418+0000 INFO ReadBuffer RB-LR-Handler(tag: 136, GET) de-allocating 1 buffers
+2013-08-27 01:13:59,418+0000 INFO GetFileHandler Handler(tag: 2574, GET) sending length: 14799449, 162554077
+2013-08-27 01:13:59,418+0000 INFO GetFileHandler Handler(tag: 140, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,418+0000 INFO GetFileHandler Handler(tag: 140, GET) reader: LR-Handler(tag: 140, GET)
+2013-08-27 01:13:59,418+0000 INFO GetFileHandler Handler(tag: 3034, GET) unregistering (last)
+2013-08-27 01:13:59,418+0000 INFO GetFileHandler Handler(tag: 140, GET) sending length: 14799449, 1145414168
+2013-08-27 01:13:59,419+0000 INFO ReadBuffer RB-LR-Handler(tag: 140, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 2575, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,419+0000 INFO ReadBuffer RB-LR-Handler(tag: 140, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 3036, GET) sending length: 14799449, 984397737
+2013-08-27 01:13:59,419+0000 INFO LocalIOProvider LR-Handler(tag: 140, GET) rbuf: RB-LR-Handler(tag: 140, GET)
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 2575, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 2575, GET) -> 141
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 141, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 141, GET) reader: LR-Handler(tag: 141, GET)
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 3037, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 141, GET) sending length: 14799449, 30749609
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 3037, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 2575, GET) sending length: 14799449, 481990858
+2013-08-27 01:13:59,419+0000 INFO ReadBuffer RB-LR-Handler(tag: 141, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 3037, GET) -> 142
+2013-08-27 01:13:59,419+0000 INFO ReadBuffer RB-LR-Handler(tag: 141, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,419+0000 INFO LocalIOProvider LR-Handler(tag: 141, GET) rbuf: RB-LR-Handler(tag: 141, GET)
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 142, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 142, GET) reader: LR-Handler(tag: 142, GET)
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 142, GET) sending length: 14799449, 787153525
+2013-08-27 01:13:59,419+0000 INFO ReadBuffer RB-LR-Handler(tag: 142, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 3037, GET) sending length: 14799449, 1304803574
+2013-08-27 01:13:59,419+0000 INFO ReadBuffer RB-LR-Handler(tag: 142, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,419+0000 INFO LocalIOProvider LR-Handler(tag: 142, GET) rbuf: RB-LR-Handler(tag: 142, GET)
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 2576, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 2576, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 2576, GET) -> 143
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 143, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 3038, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,419+0000 INFO GetFileHandler Handler(tag: 143, GET) reader: LR-Handler(tag: 143, GET)
+2013-08-27 01:13:59,420+0000 INFO GetFileHandler Handler(tag: 3038, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,420+0000 INFO GetFileHandler Handler(tag: 143, GET) sending length: 14799449, 183090454
+2013-08-27 01:13:59,420+0000 INFO ReadBuffer RB-LR-Handler(tag: 143, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,420+0000 INFO GetFileHandler Handler(tag: 3038, GET) -> 144
+2013-08-27 01:13:59,420+0000 INFO ReadBuffer RB-LR-Handler(tag: 143, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,420+0000 INFO LocalIOProvider LR-Handler(tag: 143, GET) rbuf: RB-LR-Handler(tag: 143, GET)
+2013-08-27 01:13:59,420+0000 INFO GetFileHandler Handler(tag: 2576, GET) sending length: 14799449, 1787309096
+2013-08-27 01:13:59,420+0000 INFO GetFileHandler Handler(tag: 144, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,420+0000 INFO GetFileHandler Handler(tag: 144, GET) reader: LR-Handler(tag: 144, GET)
+2013-08-27 01:13:59,420+0000 INFO GetFileHandler Handler(tag: 144, GET) sending length: 14799449, 741297553
+2013-08-27 01:13:59,420+0000 INFO GetFileHandler Handler(tag: 3038, GET) sending length: 14799449, 1435337024
+2013-08-27 01:13:59,420+0000 INFO ReadBuffer RB-LR-Handler(tag: 144, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,420+0000 INFO ReadBuffer RB-LR-Handler(tag: 144, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,420+0000 INFO GetFileHandler Handler(tag: 2577, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,420+0000 INFO LocalIOProvider LR-Handler(tag: 144, GET) rbuf: RB-LR-Handler(tag: 144, GET)
+2013-08-27 01:13:59,420+0000 INFO GetFileHandler Handler(tag: 2577, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,420+0000 INFO GetFileHandler Handler(tag: 2577, GET) -> 145
+2013-08-27 01:13:59,420+0000 INFO GetFileHandler Handler(tag: 145, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,420+0000 INFO GetFileHandler Handler(tag: 3039, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,420+0000 INFO GetFileHandler Handler(tag: 145, GET) reader: LR-Handler(tag: 145, GET)
+2013-08-27 01:13:59,420+0000 INFO GetFileHandler Handler(tag: 3039, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,420+0000 INFO GetFileHandler Handler(tag: 145, GET) sending length: 14799449, 809504097
+2013-08-27 01:13:59,420+0000 INFO GetFileHandler Handler(tag: 3039, GET) -> 146
+2013-08-27 01:13:59,420+0000 INFO ReadBuffer RB-LR-Handler(tag: 145, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,420+0000 INFO GetFileHandler Handler(tag: 2577, GET) sending length: 14799449, 1026454534
+2013-08-27 01:13:59,420+0000 INFO ReadBuffer RB-LR-Handler(tag: 145, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,420+0000 INFO LocalIOProvider LR-Handler(tag: 145, GET) rbuf: RB-LR-Handler(tag: 145, GET)
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 146, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 146, GET) reader: LR-Handler(tag: 146, GET)
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 146, GET) sending length: 14799449, 1218523345
+2013-08-27 01:13:59,421+0000 INFO ReadBuffer RB-LR-Handler(tag: 146, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 3039, GET) sending length: 14799449, 1293026250
+2013-08-27 01:13:59,421+0000 INFO ReadBuffer RB-LR-Handler(tag: 146, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 2578, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,421+0000 INFO LocalIOProvider LR-Handler(tag: 146, GET) rbuf: RB-LR-Handler(tag: 146, GET)
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 2578, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 2578, GET) -> 147
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 147, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 3040, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 147, GET) reader: LR-Handler(tag: 147, GET)
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 147, GET) sending length: 14799449, 1505159757
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 3040, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,421+0000 INFO ReadBuffer RB-LR-Handler(tag: 147, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 3040, GET) -> 148
+2013-08-27 01:13:59,421+0000 INFO ReadBuffer RB-LR-Handler(tag: 147, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 2578, GET) sending length: 14799449, 510855398
+2013-08-27 01:13:59,421+0000 INFO LocalIOProvider LR-Handler(tag: 147, GET) rbuf: RB-LR-Handler(tag: 147, GET)
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 148, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 148, GET) reader: LR-Handler(tag: 148, GET)
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 148, GET) sending length: 14799449, 244634619
+2013-08-27 01:13:59,421+0000 INFO ReadBuffer RB-LR-Handler(tag: 148, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 2579, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,421+0000 INFO ReadBuffer RB-LR-Handler(tag: 148, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 3040, GET) sending length: 14799449, 1474260819
+2013-08-27 01:13:59,421+0000 INFO LocalIOProvider LR-Handler(tag: 148, GET) rbuf: RB-LR-Handler(tag: 148, GET)
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 2579, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 2579, GET) -> 149
+2013-08-27 01:13:59,421+0000 INFO GetFileHandler Handler(tag: 149, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 3041, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 149, GET) reader: LR-Handler(tag: 149, GET)
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 3041, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 149, GET) sending length: 14799449, 235265847
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 3041, GET) -> 150
+2013-08-27 01:13:59,422+0000 INFO ReadBuffer RB-LR-Handler(tag: 149, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 2579, GET) sending length: 14799449, 300666100
+2013-08-27 01:13:59,422+0000 INFO ReadBuffer RB-LR-Handler(tag: 149, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,422+0000 INFO LocalIOProvider LR-Handler(tag: 149, GET) rbuf: RB-LR-Handler(tag: 149, GET)
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 150, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 150, GET) reader: LR-Handler(tag: 150, GET)
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 150, GET) sending length: 14799449, 266121309
+2013-08-27 01:13:59,422+0000 INFO ReadBuffer RB-LR-Handler(tag: 150, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 2580, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,422+0000 INFO ReadBuffer RB-LR-Handler(tag: 150, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 3041, GET) sending length: 14799449, 1315205412
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 2580, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,422+0000 INFO LocalIOProvider LR-Handler(tag: 150, GET) rbuf: RB-LR-Handler(tag: 150, GET)
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 2580, GET) -> 151
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 151, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 3042, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 151, GET) reader: LR-Handler(tag: 151, GET)
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 3042, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 151, GET) sending length: 14799449, 608180913
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 3042, GET) -> 152
+2013-08-27 01:13:59,422+0000 INFO ReadBuffer RB-LR-Handler(tag: 151, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,422+0000 INFO ReadBuffer RB-LR-Handler(tag: 151, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 2580, GET) sending length: 14799449, 186640853
+2013-08-27 01:13:59,422+0000 INFO LocalIOProvider LR-Handler(tag: 151, GET) rbuf: RB-LR-Handler(tag: 151, GET)
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 152, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 152, GET) reader: LR-Handler(tag: 152, GET)
+2013-08-27 01:13:59,422+0000 INFO GetFileHandler Handler(tag: 152, GET) sending length: 14799449, 1546691751
+2013-08-27 01:13:59,423+0000 INFO ReadBuffer RB-LR-Handler(tag: 152, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 2581, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,423+0000 INFO ReadBuffer RB-LR-Handler(tag: 152, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,423+0000 INFO LocalIOProvider LR-Handler(tag: 152, GET) rbuf: RB-LR-Handler(tag: 152, GET)
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 3042, GET) sending length: 14799449, 1376667533
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 2581, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 2581, GET) -> 153
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 153, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 3043, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 153, GET) reader: LR-Handler(tag: 153, GET)
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 153, GET) sending length: 14799449, 642804823
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 3043, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,423+0000 INFO ReadBuffer RB-LR-Handler(tag: 153, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 3043, GET) -> 154
+2013-08-27 01:13:59,423+0000 INFO ReadBuffer RB-LR-Handler(tag: 153, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 2581, GET) sending length: 14799449, 1342562699
+2013-08-27 01:13:59,423+0000 INFO LocalIOProvider LR-Handler(tag: 153, GET) rbuf: RB-LR-Handler(tag: 153, GET)
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 154, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 154, GET) reader: LR-Handler(tag: 154, GET)
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 154, GET) sending length: 14799449, 840603064
+2013-08-27 01:13:59,423+0000 INFO ReadBuffer RB-LR-Handler(tag: 154, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,423+0000 INFO ReadBuffer RB-LR-Handler(tag: 154, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,423+0000 INFO LocalIOProvider LR-Handler(tag: 154, GET) rbuf: RB-LR-Handler(tag: 154, GET)
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 2582, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 3043, GET) sending length: 14799449, 1599721587
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 2582, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 2582, GET) -> 155
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 155, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 3044, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 155, GET) reader: LR-Handler(tag: 155, GET)
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 3044, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 155, GET) sending length: 14799449, 427039330
+2013-08-27 01:13:59,423+0000 INFO GetFileHandler Handler(tag: 3044, GET) -> 156
+2013-08-27 01:13:59,423+0000 INFO ReadBuffer RB-LR-Handler(tag: 155, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,423+0000 INFO ReadBuffer RB-LR-Handler(tag: 155, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,423+0000 INFO LocalIOProvider LR-Handler(tag: 155, GET) rbuf: RB-LR-Handler(tag: 155, GET)
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 156, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 2582, GET) sending length: 14799449, 1972119394
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 156, GET) reader: LR-Handler(tag: 156, GET)
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 156, GET) sending length: 14799449, 1148047160
+2013-08-27 01:13:59,424+0000 INFO ReadBuffer RB-LR-Handler(tag: 156, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,424+0000 INFO ReadBuffer RB-LR-Handler(tag: 156, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 2583, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,424+0000 INFO LocalIOProvider LR-Handler(tag: 156, GET) rbuf: RB-LR-Handler(tag: 156, GET)
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 2583, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 3044, GET) sending length: 14799449, 487248712
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 2583, GET) -> 157
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 157, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 3045, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 157, GET) reader: LR-Handler(tag: 157, GET)
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 3045, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 157, GET) sending length: 14799449, 1829842089
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 3045, GET) -> 158
+2013-08-27 01:13:59,424+0000 INFO ReadBuffer RB-LR-Handler(tag: 157, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,424+0000 INFO ReadBuffer RB-LR-Handler(tag: 157, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,424+0000 INFO LocalIOProvider LR-Handler(tag: 157, GET) rbuf: RB-LR-Handler(tag: 157, GET)
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 158, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 2583, GET) sending length: 14799449, 82314654
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 158, GET) reader: LR-Handler(tag: 158, GET)
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 158, GET) sending length: 14799449, 482921110
+2013-08-27 01:13:59,424+0000 INFO ReadBuffer RB-LR-Handler(tag: 158, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,424+0000 INFO ReadBuffer RB-LR-Handler(tag: 158, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 2584, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,424+0000 INFO LocalIOProvider LR-Handler(tag: 158, GET) rbuf: RB-LR-Handler(tag: 158, GET)
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 2584, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 2584, GET) -> 159
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 159, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,424+0000 INFO GetFileHandler Handler(tag: 3045, GET) sending length: 14799449, 1410988412
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 3046, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 159, GET) reader: LR-Handler(tag: 159, GET)
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 3046, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 159, GET) sending length: 14799449, 1967810310
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 3046, GET) -> 160
+2013-08-27 01:13:59,425+0000 INFO ReadBuffer RB-LR-Handler(tag: 159, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,425+0000 INFO ReadBuffer RB-LR-Handler(tag: 159, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,425+0000 INFO LocalIOProvider LR-Handler(tag: 159, GET) rbuf: RB-LR-Handler(tag: 159, GET)
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 160, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 2584, GET) sending length: 14799449, 657684509
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 160, GET) reader: LR-Handler(tag: 160, GET)
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 160, GET) sending length: 14799449, 605211654
+2013-08-27 01:13:59,425+0000 INFO ReadBuffer RB-LR-Handler(tag: 160, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 2585, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,425+0000 INFO ReadBuffer RB-LR-Handler(tag: 160, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,425+0000 INFO LocalIOProvider LR-Handler(tag: 160, GET) rbuf: RB-LR-Handler(tag: 160, GET)
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 2585, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 2585, GET) -> 161
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 161, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 3046, GET) sending length: 14799449, 699279152
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 3047, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 161, GET) reader: LR-Handler(tag: 161, GET)
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 3047, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 161, GET) sending length: 14799449, 1754191280
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 3047, GET) -> 162
+2013-08-27 01:13:59,425+0000 INFO ReadBuffer RB-LR-Handler(tag: 161, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,425+0000 INFO ReadBuffer RB-LR-Handler(tag: 161, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,425+0000 INFO LocalIOProvider LR-Handler(tag: 161, GET) rbuf: RB-LR-Handler(tag: 161, GET)
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 162, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 162, GET) reader: LR-Handler(tag: 162, GET)
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 2585, GET) sending length: 14799449, 678857691
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 162, GET) sending length: 14799449, 2128079773
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 3048, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,425+0000 INFO ReadBuffer RB-LR-Handler(tag: 162, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 3048, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,425+0000 INFO ReadBuffer RB-LR-Handler(tag: 162, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,425+0000 INFO LocalIOProvider LR-Handler(tag: 162, GET) rbuf: RB-LR-Handler(tag: 162, GET)
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 3048, GET) -> 163
+2013-08-27 01:13:59,425+0000 INFO GetFileHandler Handler(tag: 163, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,426+0000 INFO GetFileHandler Handler(tag: 163, GET) reader: LR-Handler(tag: 163, GET)
+2013-08-27 01:13:59,426+0000 INFO GetFileHandler Handler(tag: 163, GET) sending length: 14799449, 714320295
+2013-08-27 01:13:59,426+0000 INFO GetFileHandler Handler(tag: 3049, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,426+0000 INFO GetFileHandler Handler(tag: 3047, GET) sending length: 14799449, 1147611335
+2013-08-27 01:13:59,427+0000 INFO ReadBuffer RB-LR-Handler(tag: 163, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,427+0000 INFO GetFileHandler Handler(tag: 3049, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,427+0000 INFO ReadBuffer RB-LR-Handler(tag: 163, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,427+0000 INFO LocalIOProvider LR-Handler(tag: 163, GET) rbuf: RB-LR-Handler(tag: 163, GET)
+2013-08-27 01:13:59,427+0000 INFO GetFileHandler Handler(tag: 3049, GET) -> 164
+2013-08-27 01:13:59,427+0000 INFO GetFileHandler Handler(tag: 164, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,428+0000 INFO GetFileHandler Handler(tag: 164, GET) reader: LR-Handler(tag: 164, GET)
+2013-08-27 01:13:59,428+0000 INFO GetFileHandler Handler(tag: 164, GET) sending length: 14799449, 1225872710
+2013-08-27 01:13:59,428+0000 INFO ReadBuffer RB-LR-Handler(tag: 164, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,428+0000 INFO GetFileHandler Handler(tag: 3050, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,428+0000 INFO ReadBuffer RB-LR-Handler(tag: 164, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,428+0000 INFO LocalIOProvider LR-Handler(tag: 164, GET) rbuf: RB-LR-Handler(tag: 164, GET)
+2013-08-27 01:13:59,428+0000 INFO GetFileHandler Handler(tag: 3050, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,428+0000 INFO GetFileHandler Handler(tag: 3050, GET) -> 165
+2013-08-27 01:13:59,428+0000 INFO GetFileHandler Handler(tag: 165, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:13:59,428+0000 INFO GetFileHandler Handler(tag: 165, GET) reader: LR-Handler(tag: 165, GET)
+2013-08-27 01:13:59,428+0000 INFO GetFileHandler Handler(tag: 165, GET) sending length: 14799449, 1757648942
+2013-08-27 01:13:59,428+0000 INFO ReadBuffer RB-LR-Handler(tag: 165, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:13:59,428+0000 INFO ReadBuffer RB-LR-Handler(tag: 165, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:13:59,428+0000 INFO LocalIOProvider LR-Handler(tag: 165, GET) rbuf: RB-LR-Handler(tag: 165, GET)
+2013-08-27 01:13:59,429+0000 INFO GetFileHandler Handler(tag: 3048, GET) sending length: 14799449, 364561223
+2013-08-27 01:13:59,429+0000 INFO GetFileHandler Handler(tag: 3049, GET) sending length: 14799449, 409630070
+2013-08-27 01:13:59,430+0000 INFO GetFileHandler Handler(tag: 3050, GET) sending length: 14799449, 783252479
+2013-08-27 01:13:59,880+0000 INFO ThrottleManager O maxBuffers=1024, crtBuffers=1023, allowedTransfers=0, active=0, suspended=0
+2013-08-27 01:13:59,881+0000 INFO ThrottleManager mem=109.09 MB, heap=361.69 MB, maxHeap=910.25 MB
+2013-08-27 01:13:59,881+0000 INFO ThrottleManager I maxBuffers=1024, crtBuffers=256, allowedTransfers=94, active=0, suspended=0
+2013-08-27 01:14:00,008+0000 INFO RuntimeStats$ProgressTicker Selecting site:1 Stage in:32
+2013-08-27 01:14:00,380+0000 INFO ThrottleManager O maxBuffers=1024, crtBuffers=1023, allowedTransfers=0, active=0, suspended=0
+2013-08-27 01:14:00,380+0000 INFO ThrottleManager mem=105.72 MB, heap=361.69 MB, maxHeap=910.25 MB
+2013-08-27 01:14:00,381+0000 INFO ThrottleManager I maxBuffers=1024, crtBuffers=256, allowedTransfers=94, active=0, suspended=0
+2013-08-27 01:14:00,880+0000 INFO ThrottleManager O maxBuffers=1024, crtBuffers=1023, allowedTransfers=0, active=0, suspended=0
+2013-08-27 01:14:00,880+0000 INFO ThrottleManager mem=97.68 MB, heap=361.69 MB, maxHeap=910.25 MB
+2013-08-27 01:14:00,881+0000 INFO ThrottleManager I maxBuffers=1024, crtBuffers=256, allowedTransfers=94, active=0, suspended=0
+2013-08-27 01:14:01,009+0000 INFO RuntimeStats$ProgressTicker Selecting site:1 Stage in:32
+2013-08-27 01:14:01,380+0000 INFO ThrottleManager O maxBuffers=1024, crtBuffers=1023, allowedTransfers=0, active=0, suspended=0
+2013-08-27 01:14:01,380+0000 INFO ThrottleManager mem=152.99 MB, heap=361.69 MB, maxHeap=910.25 MB
+2013-08-27 01:14:01,381+0000 INFO ThrottleManager I maxBuffers=1024, crtBuffers=256, allowedTransfers=94, active=0, suspended=0
+2013-08-27 01:14:01,880+0000 INFO ThrottleManager O maxBuffers=1024, crtBuffers=1023, allowedTransfers=0, active=0, suspended=0
+2013-08-27 01:14:01,880+0000 INFO ThrottleManager mem=138.58 MB, heap=359.38 MB, maxHeap=910.25 MB
+2013-08-27 01:14:01,881+0000 INFO ThrottleManager I maxBuffers=1024, crtBuffers=256, allowedTransfers=94, active=0, suspended=0
+2013-08-27 01:14:02,009+0000 INFO RuntimeStats$ProgressTicker Selecting site:1 Stage in:32
+2013-08-27 01:14:02,380+0000 INFO ThrottleManager O maxBuffers=1024, crtBuffers=1023, allowedTransfers=0, active=0, suspended=0
+2013-08-27 01:14:02,380+0000 INFO ThrottleManager mem=197.81 MB, heap=359.38 MB, maxHeap=910.25 MB
+2013-08-27 01:14:02,381+0000 INFO ThrottleManager I maxBuffers=1024, crtBuffers=256, allowedTransfers=94, active=0, suspended=0
+2013-08-27 01:14:02,501+0000 INFO Block Block task status changed: Active
+2013-08-27 01:14:02,501+0000 INFO Block Block task status changed: Active
+2013-08-27 01:14:02,501+0000 INFO RemoteLogHandler BLOCK_ACTIVE id=0827-1301520-000000
+2013-08-27 01:14:02,501+0000 INFO RequestHandler Handler(tag: 166, RLOG) unregistering (send)
+2013-08-27 01:14:02,501+0000 INFO RemoteLogHandler BLOCK_ACTIVE id=0827-1301520-000001
+2013-08-27 01:14:02,501+0000 INFO RequestHandler Handler(tag: 167, RLOG) unregistering (send)
+2013-08-27 01:14:02,502+0000 INFO AbstractQueuePoller Actively monitored: 2, New: 0, Done: 0
+2013-08-27 01:14:02,635+0000 INFO GetFileHandler Handler(tag: 132, GET) unregistering (last)
+2013-08-27 01:14:02,635+0000 INFO ReadBuffer RB-LR-Handler(tag: 132, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,707+0000 INFO GetFileHandler Handler(tag: 2570, GET) unregistering (last)
+2013-08-27 01:14:02,733+0000 INFO GetFileHandler Handler(tag: 133, GET) unregistering (last)
+2013-08-27 01:14:02,733+0000 INFO ReadBuffer RB-LR-Handler(tag: 133, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,798+0000 INFO GetFileHandler Handler(tag: 2571, GET) unregistering (last)
+2013-08-27 01:14:02,815+0000 INFO GetFileHandler Handler(tag: 135, GET) unregistering (last)
+2013-08-27 01:14:02,815+0000 INFO ReadBuffer RB-LR-Handler(tag: 135, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,856+0000 INFO GetFileHandler Handler(tag: 137, GET) unregistering (last)
+2013-08-27 01:14:02,856+0000 INFO ReadBuffer RB-LR-Handler(tag: 137, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,876+0000 INFO GetFileHandler Handler(tag: 138, GET) unregistering (last)
+2013-08-27 01:14:02,876+0000 INFO ReadBuffer RB-LR-Handler(tag: 138, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,880+0000 INFO ThrottleManager O maxBuffers=1024, crtBuffers=1023, allowedTransfers=0, active=0, suspended=0
+2013-08-27 01:14:02,880+0000 INFO ThrottleManager mem=191.87 MB, heap=399.94 MB, maxHeap=910.25 MB
+2013-08-27 01:14:02,881+0000 INFO ThrottleManager I maxBuffers=1024, crtBuffers=216, allowedTransfers=115, active=0, suspended=0
+2013-08-27 01:14:02,881+0000 INFO GetFileHandler Handler(tag: 2572, GET) unregistering (last)
+2013-08-27 01:14:02,894+0000 INFO GetFileHandler Handler(tag: 139, GET) unregistering (last)
+2013-08-27 01:14:02,894+0000 INFO ReadBuffer RB-LR-Handler(tag: 139, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,905+0000 INFO GetFileHandler Handler(tag: 140, GET) unregistering (last)
+2013-08-27 01:14:02,905+0000 INFO ReadBuffer RB-LR-Handler(tag: 140, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,912+0000 INFO GetFileHandler Handler(tag: 141, GET) unregistering (last)
+2013-08-27 01:14:02,912+0000 INFO ReadBuffer RB-LR-Handler(tag: 141, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,921+0000 INFO GetFileHandler Handler(tag: 2573, GET) unregistering (last)
+2013-08-27 01:14:02,923+0000 INFO GetFileHandler Handler(tag: 142, GET) unregistering (last)
+2013-08-27 01:14:02,923+0000 INFO ReadBuffer RB-LR-Handler(tag: 142, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,931+0000 INFO GetFileHandler Handler(tag: 143, GET) unregistering (last)
+2013-08-27 01:14:02,931+0000 INFO ReadBuffer RB-LR-Handler(tag: 143, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,938+0000 INFO GetFileHandler Handler(tag: 3035, GET) unregistering (last)
+2013-08-27 01:14:02,939+0000 INFO GetFileHandler Handler(tag: 144, GET) unregistering (last)
+2013-08-27 01:14:02,939+0000 INFO ReadBuffer RB-LR-Handler(tag: 144, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,946+0000 INFO GetFileHandler Handler(tag: 3051, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:02,946+0000 INFO GetFileHandler Handler(tag: 3051, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:02,946+0000 INFO GetFileHandler Handler(tag: 3051, GET) -> 168
+2013-08-27 01:14:02,946+0000 INFO GetFileHandler Handler(tag: 168, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:02,947+0000 INFO GetFileHandler Handler(tag: 168, GET) reader: LR-Handler(tag: 168, GET)
+2013-08-27 01:14:02,947+0000 INFO GetFileHandler Handler(tag: 168, GET) sending length: 148937, 161475341
+2013-08-27 01:14:02,947+0000 INFO ReadBuffer RB-LR-Handler(tag: 168, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:02,947+0000 INFO ReadBuffer RB-LR-Handler(tag: 168, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:02,947+0000 INFO LocalIOProvider LR-Handler(tag: 168, GET) rbuf: RB-LR-Handler(tag: 168, GET)
+2013-08-27 01:14:02,947+0000 INFO GetFileHandler Handler(tag: 168, GET) unregistering (last)
+2013-08-27 01:14:02,947+0000 INFO ReadBuffer RB-LR-Handler(tag: 168, GET) de-allocating 5 buffers
+2013-08-27 01:14:02,949+0000 INFO GetFileHandler Handler(tag: 145, GET) unregistering (last)
+2013-08-27 01:14:02,949+0000 INFO ReadBuffer RB-LR-Handler(tag: 145, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,949+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:02,953+0000 INFO GetFileHandler Handler(tag: 2574, GET) unregistering (last)
+2013-08-27 01:14:02,959+0000 INFO GetFileHandler Handler(tag: 146, GET) unregistering (last)
+2013-08-27 01:14:02,959+0000 INFO ReadBuffer RB-LR-Handler(tag: 146, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,961+0000 INFO GetFileHandler Handler(tag: 147, GET) unregistering (last)
+2013-08-27 01:14:02,961+0000 INFO ReadBuffer RB-LR-Handler(tag: 147, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,964+0000 INFO GetFileHandler Handler(tag: 148, GET) unregistering (last)
+2013-08-27 01:14:02,964+0000 INFO ReadBuffer RB-LR-Handler(tag: 148, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,964+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:02,964+0000 INFO GetFileHandler Handler(tag: 3036, GET) unregistering (last)
+2013-08-27 01:14:02,965+0000 INFO GetFileHandler Handler(tag: 149, GET) unregistering (last)
+2013-08-27 01:14:02,965+0000 INFO ReadBuffer RB-LR-Handler(tag: 149, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,968+0000 INFO GetFileHandler Handler(tag: 150, GET) unregistering (last)
+2013-08-27 01:14:02,968+0000 INFO ReadBuffer RB-LR-Handler(tag: 150, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,968+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:02,970+0000 INFO GetFileHandler Handler(tag: 2575, GET) unregistering (last)
+2013-08-27 01:14:02,972+0000 INFO GetFileHandler Handler(tag: 151, GET) unregistering (last)
+2013-08-27 01:14:02,972+0000 INFO ReadBuffer RB-LR-Handler(tag: 151, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,972+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:02,975+0000 INFO GetFileHandler Handler(tag: 152, GET) unregistering (last)
+2013-08-27 01:14:02,975+0000 INFO ReadBuffer RB-LR-Handler(tag: 152, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,975+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:02,976+0000 INFO GetFileHandler Handler(tag: 3037, GET) unregistering (last)
+2013-08-27 01:14:02,977+0000 INFO GetFileHandler Handler(tag: 153, GET) unregistering (last)
+2013-08-27 01:14:02,977+0000 INFO ReadBuffer RB-LR-Handler(tag: 153, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,977+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:02,980+0000 INFO GetFileHandler Handler(tag: 154, GET) unregistering (last)
+2013-08-27 01:14:02,980+0000 INFO ReadBuffer RB-LR-Handler(tag: 154, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,980+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:02,982+0000 INFO GetFileHandler Handler(tag: 2576, GET) unregistering (last)
+2013-08-27 01:14:02,985+0000 INFO GetFileHandler Handler(tag: 155, GET) unregistering (last)
+2013-08-27 01:14:02,985+0000 INFO ReadBuffer RB-LR-Handler(tag: 155, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,985+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:02,989+0000 INFO GetFileHandler Handler(tag: 156, GET) unregistering (last)
+2013-08-27 01:14:02,989+0000 INFO ReadBuffer RB-LR-Handler(tag: 156, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,989+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:02,989+0000 INFO GetFileHandler Handler(tag: 3052, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:02,989+0000 INFO GetFileHandler Handler(tag: 3052, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:02,989+0000 INFO GetFileHandler Handler(tag: 3052, GET) -> 169
+2013-08-27 01:14:02,989+0000 INFO GetFileHandler Handler(tag: 169, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:02,989+0000 INFO GetFileHandler Handler(tag: 169, GET) reader: LR-Handler(tag: 169, GET)
+2013-08-27 01:14:02,989+0000 INFO GetFileHandler Handler(tag: 169, GET) sending length: 148937, 583779936
+2013-08-27 01:14:02,989+0000 INFO ReadBuffer RB-LR-Handler(tag: 169, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:02,989+0000 INFO ReadBuffer RB-LR-Handler(tag: 169, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:02,989+0000 INFO LocalIOProvider LR-Handler(tag: 169, GET) rbuf: RB-LR-Handler(tag: 169, GET)
+2013-08-27 01:14:02,989+0000 INFO GetFileHandler Handler(tag: 3038, GET) unregistering (last)
+2013-08-27 01:14:02,989+0000 INFO GetFileHandler Handler(tag: 169, GET) unregistering (last)
+2013-08-27 01:14:02,989+0000 INFO ReadBuffer RB-LR-Handler(tag: 169, GET) de-allocating 5 buffers
+2013-08-27 01:14:02,990+0000 INFO GetFileHandler Handler(tag: 157, GET) unregistering (last)
+2013-08-27 01:14:02,990+0000 INFO ReadBuffer RB-LR-Handler(tag: 157, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,990+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:02,994+0000 INFO GetFileHandler Handler(tag: 158, GET) unregistering (last)
+2013-08-27 01:14:02,994+0000 INFO ReadBuffer RB-LR-Handler(tag: 158, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,994+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:02,997+0000 INFO GetFileHandler Handler(tag: 159, GET) unregistering (last)
+2013-08-27 01:14:02,997+0000 INFO GetFileHandler Handler(tag: 3051, GET) sending length: 148937, 91992343
+2013-08-27 01:14:02,997+0000 INFO ReadBuffer RB-LR-Handler(tag: 159, GET) de-allocating 8 buffers
+2013-08-27 01:14:02,997+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:02,998+0000 INFO GetFileHandler Handler(tag: 3051, GET) unregistering (last)
+2013-08-27 01:14:02,998+0000 INFO GetFileHandler Handler(tag: 3053, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:02,998+0000 INFO GetFileHandler Handler(tag: 3053, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:02,998+0000 INFO GetFileHandler Handler(tag: 3053, GET) -> 170
+2013-08-27 01:14:02,999+0000 INFO GetFileHandler Handler(tag: 170, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:02,999+0000 INFO GetFileHandler Handler(tag: 170, GET) reader: LR-Handler(tag: 170, GET)
+2013-08-27 01:14:02,999+0000 INFO GetFileHandler Handler(tag: 170, GET) sending length: 148937, 1227704800
+2013-08-27 01:14:02,999+0000 INFO ReadBuffer RB-LR-Handler(tag: 170, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:02,999+0000 INFO ReadBuffer RB-LR-Handler(tag: 170, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:02,999+0000 INFO LocalIOProvider LR-Handler(tag: 170, GET) rbuf: RB-LR-Handler(tag: 170, GET)
+2013-08-27 01:14:02,999+0000 INFO GetFileHandler Handler(tag: 170, GET) unregistering (last)
+2013-08-27 01:14:02,999+0000 INFO ReadBuffer RB-LR-Handler(tag: 170, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,000+0000 INFO GetFileHandler Handler(tag: 2577, GET) unregistering (last)
+2013-08-27 01:14:03,000+0000 INFO GetFileHandler Handler(tag: 160, GET) unregistering (last)
+2013-08-27 01:14:03,000+0000 INFO ReadBuffer RB-LR-Handler(tag: 160, GET) de-allocating 8 buffers
+2013-08-27 01:14:03,000+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,002+0000 INFO GetFileHandler Handler(tag: 161, GET) unregistering (last)
+2013-08-27 01:14:03,002+0000 INFO ReadBuffer RB-LR-Handler(tag: 161, GET) de-allocating 8 buffers
+2013-08-27 01:14:03,002+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,005+0000 INFO GetFileHandler Handler(tag: 3039, GET) unregistering (last)
+2013-08-27 01:14:03,005+0000 INFO GetFileHandler Handler(tag: 162, GET) unregistering (last)
+2013-08-27 01:14:03,005+0000 INFO ReadBuffer RB-LR-Handler(tag: 162, GET) de-allocating 8 buffers
+2013-08-27 01:14:03,005+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,005+0000 INFO GetFileHandler Handler(tag: 163, GET) unregistering (last)
+2013-08-27 01:14:03,005+0000 INFO ReadBuffer RB-LR-Handler(tag: 163, GET) de-allocating 8 buffers
+2013-08-27 01:14:03,005+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,006+0000 INFO GetFileHandler Handler(tag: 2578, GET) unregistering (last)
+2013-08-27 01:14:03,007+0000 INFO GetFileHandler Handler(tag: 164, GET) unregistering (last)
+2013-08-27 01:14:03,007+0000 INFO ReadBuffer RB-LR-Handler(tag: 164, GET) de-allocating 8 buffers
+2013-08-27 01:14:03,007+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,007+0000 INFO GetFileHandler Handler(tag: 165, GET) unregistering (last)
+2013-08-27 01:14:03,007+0000 INFO ReadBuffer RB-LR-Handler(tag: 165, GET) de-allocating 8 buffers
+2013-08-27 01:14:03,008+0000 INFO GetFileHandler Handler(tag: 3040, GET) unregistering (last)
+2013-08-27 01:14:03,008+0000 INFO GetFileHandler Handler(tag: 2579, GET) unregistering (last)
+2013-08-27 01:14:03,009+0000 INFO GetFileHandler Handler(tag: 3041, GET) unregistering (last)
+2013-08-27 01:14:03,009+0000 INFO RuntimeStats$ProgressTicker Selecting site:1 Stage in:32
+2013-08-27 01:14:03,010+0000 INFO GetFileHandler Handler(tag: 3054, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,010+0000 INFO GetFileHandler Handler(tag: 3054, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,010+0000 INFO GetFileHandler Handler(tag: 3054, GET) -> 171
+2013-08-27 01:14:03,010+0000 INFO GetFileHandler Handler(tag: 171, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,010+0000 INFO GetFileHandler Handler(tag: 2580, GET) unregistering (last)
+2013-08-27 01:14:03,010+0000 INFO GetFileHandler Handler(tag: 171, GET) reader: LR-Handler(tag: 171, GET)
+2013-08-27 01:14:03,010+0000 INFO GetFileHandler Handler(tag: 171, GET) sending length: 148937, 1444230150
+2013-08-27 01:14:03,010+0000 INFO ReadBuffer RB-LR-Handler(tag: 171, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,010+0000 INFO ReadBuffer RB-LR-Handler(tag: 171, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,010+0000 INFO LocalIOProvider LR-Handler(tag: 171, GET) rbuf: RB-LR-Handler(tag: 171, GET)
+2013-08-27 01:14:03,010+0000 INFO GetFileHandler Handler(tag: 171, GET) unregistering (last)
+2013-08-27 01:14:03,010+0000 INFO ReadBuffer RB-LR-Handler(tag: 171, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,011+0000 INFO GetFileHandler Handler(tag: 3042, GET) unregistering (last)
+2013-08-27 01:14:03,012+0000 INFO GetFileHandler Handler(tag: 2581, GET) unregistering (last)
+2013-08-27 01:14:03,014+0000 INFO GetFileHandler Handler(tag: 3043, GET) unregistering (last)
+2013-08-27 01:14:03,015+0000 INFO GetFileHandler Handler(tag: 2582, GET) unregistering (last)
+2013-08-27 01:14:03,016+0000 INFO GetFileHandler Handler(tag: 3044, GET) unregistering (last)
+2013-08-27 01:14:03,016+0000 INFO GetFileHandler Handler(tag: 3052, GET) sending length: 148937, 662618683
+2013-08-27 01:14:03,016+0000 INFO GetFileHandler Handler(tag: 3052, GET) unregistering (last)
+2013-08-27 01:14:03,017+0000 INFO GetFileHandler Handler(tag: 3055, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,017+0000 INFO GetFileHandler Handler(tag: 3055, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,017+0000 INFO GetFileHandler Handler(tag: 3055, GET) -> 172
+2013-08-27 01:14:03,017+0000 INFO GetFileHandler Handler(tag: 172, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,017+0000 INFO GetFileHandler Handler(tag: 172, GET) reader: LR-Handler(tag: 172, GET)
+2013-08-27 01:14:03,017+0000 INFO GetFileHandler Handler(tag: 172, GET) sending length: 543, 428637515
+2013-08-27 01:14:03,017+0000 INFO ReadBuffer RB-LR-Handler(tag: 172, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,017+0000 INFO ReadBuffer RB-LR-Handler(tag: 172, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,017+0000 INFO LocalIOProvider LR-Handler(tag: 172, GET) rbuf: RB-LR-Handler(tag: 172, GET)
+2013-08-27 01:14:03,017+0000 INFO GetFileHandler Handler(tag: 172, GET) unregistering (last)
+2013-08-27 01:14:03,017+0000 INFO ReadBuffer RB-LR-Handler(tag: 172, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,017+0000 INFO GetFileHandler Handler(tag: 2583, GET) unregistering (last)
+2013-08-27 01:14:03,018+0000 INFO GetFileHandler Handler(tag: 3045, GET) unregistering (last)
+2013-08-27 01:14:03,019+0000 INFO GetFileHandler Handler(tag: 2584, GET) unregistering (last)
+2013-08-27 01:14:03,019+0000 INFO GetFileHandler Handler(tag: 3053, GET) sending length: 148937, 1541393422
+2013-08-27 01:14:03,020+0000 INFO GetFileHandler Handler(tag: 3053, GET) unregistering (last)
+2013-08-27 01:14:03,021+0000 INFO GetFileHandler Handler(tag: 3046, GET) unregistering (last)
+2013-08-27 01:14:03,022+0000 INFO GetFileHandler Handler(tag: 2585, GET) unregistering (last)
+2013-08-27 01:14:03,022+0000 INFO GetFileHandler Handler(tag: 3047, GET) unregistering (last)
+2013-08-27 01:14:03,023+0000 INFO GetFileHandler Handler(tag: 3048, GET) unregistering (last)
+2013-08-27 01:14:03,023+0000 INFO GetFileHandler Handler(tag: 3049, GET) unregistering (last)
+2013-08-27 01:14:03,023+0000 INFO GetFileHandler Handler(tag: 3050, GET) unregistering (last)
+2013-08-27 01:14:03,023+0000 INFO GetFileHandler Handler(tag: 3054, GET) sending length: 148937, 396532217
+2013-08-27 01:14:03,023+0000 INFO GetFileHandler Handler(tag: 3056, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,023+0000 INFO GetFileHandler Handler(tag: 3054, GET) unregistering (last)
+2013-08-27 01:14:03,023+0000 INFO GetFileHandler Handler(tag: 3055, GET) sending length: 543, 1260563950
+2013-08-27 01:14:03,023+0000 INFO GetFileHandler Handler(tag: 3055, GET) unregistering (last)
+2013-08-27 01:14:03,023+0000 INFO GetFileHandler Handler(tag: 3056, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,023+0000 INFO GetFileHandler Handler(tag: 3056, GET) -> 173
+2013-08-27 01:14:03,023+0000 INFO GetFileHandler Handler(tag: 173, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,023+0000 INFO GetFileHandler Handler(tag: 173, GET) reader: LR-Handler(tag: 173, GET)
+2013-08-27 01:14:03,023+0000 INFO GetFileHandler Handler(tag: 173, GET) sending length: 148937, 1709424479
+2013-08-27 01:14:03,023+0000 INFO GetFileHandler Handler(tag: 3056, GET) sending length: 148937, 1260988987
+2013-08-27 01:14:03,023+0000 INFO ReadBuffer RB-LR-Handler(tag: 173, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,023+0000 INFO ReadBuffer RB-LR-Handler(tag: 173, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,023+0000 INFO LocalIOProvider LR-Handler(tag: 173, GET) rbuf: RB-LR-Handler(tag: 173, GET)
+2013-08-27 01:14:03,024+0000 INFO GetFileHandler Handler(tag: 173, GET) unregistering (last)
+2013-08-27 01:14:03,024+0000 INFO GetFileHandler Handler(tag: 3056, GET) unregistering (last)
+2013-08-27 01:14:03,024+0000 INFO ReadBuffer RB-LR-Handler(tag: 173, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,024+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,024+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,024+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,024+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,041+0000 INFO GetFileHandler Handler(tag: 3057, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,041+0000 INFO GetFileHandler Handler(tag: 3057, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,041+0000 INFO GetFileHandler Handler(tag: 3057, GET) -> 174
+2013-08-27 01:14:03,041+0000 INFO GetFileHandler Handler(tag: 174, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,041+0000 INFO GetFileHandler Handler(tag: 174, GET) reader: LR-Handler(tag: 174, GET)
+2013-08-27 01:14:03,041+0000 INFO GetFileHandler Handler(tag: 174, GET) sending length: 148937, 23965417
+2013-08-27 01:14:03,042+0000 INFO GetFileHandler Handler(tag: 3057, GET) sending length: 148937, 1207321530
+2013-08-27 01:14:03,042+0000 INFO ReadBuffer RB-LR-Handler(tag: 174, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,042+0000 INFO ReadBuffer RB-LR-Handler(tag: 174, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,042+0000 INFO LocalIOProvider LR-Handler(tag: 174, GET) rbuf: RB-LR-Handler(tag: 174, GET)
+2013-08-27 01:14:03,042+0000 INFO GetFileHandler Handler(tag: 174, GET) unregistering (last)
+2013-08-27 01:14:03,042+0000 INFO GetFileHandler Handler(tag: 3057, GET) unregistering (last)
+2013-08-27 01:14:03,042+0000 INFO ReadBuffer RB-LR-Handler(tag: 174, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,042+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,042+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,042+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,042+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,043+0000 INFO GetFileHandler Handler(tag: 3058, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,043+0000 INFO GetFileHandler Handler(tag: 3058, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,043+0000 INFO GetFileHandler Handler(tag: 3058, GET) -> 175
+2013-08-27 01:14:03,043+0000 INFO GetFileHandler Handler(tag: 175, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,043+0000 INFO GetFileHandler Handler(tag: 175, GET) reader: LR-Handler(tag: 175, GET)
+2013-08-27 01:14:03,043+0000 INFO GetFileHandler Handler(tag: 175, GET) sending length: 148937, 443097568
+2013-08-27 01:14:03,043+0000 INFO GetFileHandler Handler(tag: 3058, GET) sending length: 148937, 1815021227
+2013-08-27 01:14:03,043+0000 INFO ReadBuffer RB-LR-Handler(tag: 175, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,043+0000 INFO ReadBuffer RB-LR-Handler(tag: 175, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,043+0000 INFO LocalIOProvider LR-Handler(tag: 175, GET) rbuf: RB-LR-Handler(tag: 175, GET)
+2013-08-27 01:14:03,043+0000 INFO GetFileHandler Handler(tag: 175, GET) unregistering (last)
+2013-08-27 01:14:03,043+0000 INFO GetFileHandler Handler(tag: 3058, GET) unregistering (last)
+2013-08-27 01:14:03,043+0000 INFO ReadBuffer RB-LR-Handler(tag: 175, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,043+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,043+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,043+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,043+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,045+0000 INFO GetFileHandler Handler(tag: 3059, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,045+0000 INFO GetFileHandler Handler(tag: 3059, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,045+0000 INFO GetFileHandler Handler(tag: 3059, GET) -> 176
+2013-08-27 01:14:03,045+0000 INFO GetFileHandler Handler(tag: 176, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,045+0000 INFO GetFileHandler Handler(tag: 176, GET) reader: LR-Handler(tag: 176, GET)
+2013-08-27 01:14:03,045+0000 INFO GetFileHandler Handler(tag: 176, GET) sending length: 148937, 2047058042
+2013-08-27 01:14:03,045+0000 INFO GetFileHandler Handler(tag: 3059, GET) sending length: 148937, 69003307
+2013-08-27 01:14:03,045+0000 INFO ReadBuffer RB-LR-Handler(tag: 176, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,045+0000 INFO ReadBuffer RB-LR-Handler(tag: 176, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,045+0000 INFO LocalIOProvider LR-Handler(tag: 176, GET) rbuf: RB-LR-Handler(tag: 176, GET)
+2013-08-27 01:14:03,045+0000 INFO GetFileHandler Handler(tag: 176, GET) unregistering (last)
+2013-08-27 01:14:03,045+0000 INFO ReadBuffer RB-LR-Handler(tag: 176, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,045+0000 INFO GetFileHandler Handler(tag: 3059, GET) unregistering (last)
+2013-08-27 01:14:03,045+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,045+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,045+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,045+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,046+0000 INFO GetFileHandler Handler(tag: 3060, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,046+0000 INFO GetFileHandler Handler(tag: 3060, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,046+0000 INFO GetFileHandler Handler(tag: 3060, GET) -> 177
+2013-08-27 01:14:03,046+0000 INFO GetFileHandler Handler(tag: 177, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,046+0000 INFO GetFileHandler Handler(tag: 177, GET) reader: LR-Handler(tag: 177, GET)
+2013-08-27 01:14:03,046+0000 INFO GetFileHandler Handler(tag: 177, GET) sending length: 148937, 521180963
+2013-08-27 01:14:03,046+0000 INFO GetFileHandler Handler(tag: 3060, GET) sending length: 148937, 2050132675
+2013-08-27 01:14:03,046+0000 INFO ReadBuffer RB-LR-Handler(tag: 177, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,046+0000 INFO ReadBuffer RB-LR-Handler(tag: 177, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,047+0000 INFO LocalIOProvider LR-Handler(tag: 177, GET) rbuf: RB-LR-Handler(tag: 177, GET)
+2013-08-27 01:14:03,047+0000 INFO GetFileHandler Handler(tag: 177, GET) unregistering (last)
+2013-08-27 01:14:03,047+0000 INFO GetFileHandler Handler(tag: 3060, GET) unregistering (last)
+2013-08-27 01:14:03,047+0000 INFO ReadBuffer RB-LR-Handler(tag: 177, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,047+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,047+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,047+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,047+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,048+0000 INFO GetFileHandler Handler(tag: 3061, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,048+0000 INFO GetFileHandler Handler(tag: 3061, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,048+0000 INFO GetFileHandler Handler(tag: 3061, GET) -> 178
+2013-08-27 01:14:03,048+0000 INFO GetFileHandler Handler(tag: 178, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,048+0000 INFO GetFileHandler Handler(tag: 178, GET) reader: LR-Handler(tag: 178, GET)
+2013-08-27 01:14:03,048+0000 INFO GetFileHandler Handler(tag: 178, GET) sending length: 148937, 1263086663
+2013-08-27 01:14:03,048+0000 INFO GetFileHandler Handler(tag: 3061, GET) sending length: 148937, 821694446
+2013-08-27 01:14:03,048+0000 INFO ReadBuffer RB-LR-Handler(tag: 178, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,048+0000 INFO ReadBuffer RB-LR-Handler(tag: 178, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,048+0000 INFO LocalIOProvider LR-Handler(tag: 178, GET) rbuf: RB-LR-Handler(tag: 178, GET)
+2013-08-27 01:14:03,048+0000 INFO GetFileHandler Handler(tag: 178, GET) unregistering (last)
+2013-08-27 01:14:03,048+0000 INFO GetFileHandler Handler(tag: 3061, GET) unregistering (last)
+2013-08-27 01:14:03,048+0000 INFO ReadBuffer RB-LR-Handler(tag: 178, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,048+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,048+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,048+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,048+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,050+0000 INFO GetFileHandler Handler(tag: 3062, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,050+0000 INFO GetFileHandler Handler(tag: 3062, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,050+0000 INFO GetFileHandler Handler(tag: 3062, GET) -> 179
+2013-08-27 01:14:03,050+0000 INFO GetFileHandler Handler(tag: 179, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,050+0000 INFO GetFileHandler Handler(tag: 179, GET) reader: LR-Handler(tag: 179, GET)
+2013-08-27 01:14:03,050+0000 INFO GetFileHandler Handler(tag: 179, GET) sending length: 543, 2131040067
+2013-08-27 01:14:03,050+0000 INFO GetFileHandler Handler(tag: 3062, GET) sending length: 543, 658141403
+2013-08-27 01:14:03,050+0000 INFO ReadBuffer RB-LR-Handler(tag: 179, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,050+0000 INFO ReadBuffer RB-LR-Handler(tag: 179, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,050+0000 INFO LocalIOProvider LR-Handler(tag: 179, GET) rbuf: RB-LR-Handler(tag: 179, GET)
+2013-08-27 01:14:03,050+0000 INFO GetFileHandler Handler(tag: 179, GET) unregistering (last)
+2013-08-27 01:14:03,050+0000 INFO ReadBuffer RB-LR-Handler(tag: 179, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,050+0000 INFO GetFileHandler Handler(tag: 3062, GET) unregistering (last)
+2013-08-27 01:14:03,051+0000 INFO GetFileHandler Handler(tag: 3063, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,051+0000 INFO GetFileHandler Handler(tag: 3063, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,051+0000 INFO GetFileHandler Handler(tag: 3063, GET) -> 180
+2013-08-27 01:14:03,051+0000 INFO GetFileHandler Handler(tag: 180, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,051+0000 INFO GetFileHandler Handler(tag: 180, GET) reader: LR-Handler(tag: 180, GET)
+2013-08-27 01:14:03,051+0000 INFO GetFileHandler Handler(tag: 180, GET) sending length: 148937, 220931271
+2013-08-27 01:14:03,051+0000 INFO GetFileHandler Handler(tag: 3063, GET) sending length: 148937, 192646034
+2013-08-27 01:14:03,051+0000 INFO ReadBuffer RB-LR-Handler(tag: 180, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,051+0000 INFO ReadBuffer RB-LR-Handler(tag: 180, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,051+0000 INFO LocalIOProvider LR-Handler(tag: 180, GET) rbuf: RB-LR-Handler(tag: 180, GET)
+2013-08-27 01:14:03,052+0000 INFO GetFileHandler Handler(tag: 180, GET) unregistering (last)
+2013-08-27 01:14:03,052+0000 INFO GetFileHandler Handler(tag: 3063, GET) unregistering (last)
+2013-08-27 01:14:03,052+0000 INFO ReadBuffer RB-LR-Handler(tag: 180, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,052+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,052+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,052+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,052+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,054+0000 INFO GetFileHandler Handler(tag: 3064, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,054+0000 INFO GetFileHandler Handler(tag: 3064, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,054+0000 INFO GetFileHandler Handler(tag: 3064, GET) -> 181
+2013-08-27 01:14:03,054+0000 INFO GetFileHandler Handler(tag: 181, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,054+0000 INFO GetFileHandler Handler(tag: 181, GET) reader: LR-Handler(tag: 181, GET)
+2013-08-27 01:14:03,054+0000 INFO GetFileHandler Handler(tag: 181, GET) sending length: 543, 714233355
+2013-08-27 01:14:03,054+0000 INFO GetFileHandler Handler(tag: 3064, GET) sending length: 543, 1833894402
+2013-08-27 01:14:03,054+0000 INFO ReadBuffer RB-LR-Handler(tag: 181, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,054+0000 INFO ReadBuffer RB-LR-Handler(tag: 181, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,054+0000 INFO LocalIOProvider LR-Handler(tag: 181, GET) rbuf: RB-LR-Handler(tag: 181, GET)
+2013-08-27 01:14:03,054+0000 INFO GetFileHandler Handler(tag: 181, GET) unregistering (last)
+2013-08-27 01:14:03,054+0000 INFO ReadBuffer RB-LR-Handler(tag: 181, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,054+0000 INFO GetFileHandler Handler(tag: 3064, GET) unregistering (last)
+2013-08-27 01:14:03,055+0000 INFO GetFileHandler Handler(tag: 3065, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,055+0000 INFO GetFileHandler Handler(tag: 3065, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,055+0000 INFO GetFileHandler Handler(tag: 3065, GET) -> 182
+2013-08-27 01:14:03,056+0000 INFO GetFileHandler Handler(tag: 182, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,056+0000 INFO GetFileHandler Handler(tag: 182, GET) reader: LR-Handler(tag: 182, GET)
+2013-08-27 01:14:03,056+0000 INFO GetFileHandler Handler(tag: 182, GET) sending length: 148937, 556589322
+2013-08-27 01:14:03,056+0000 INFO GetFileHandler Handler(tag: 3065, GET) sending length: 148937, 157968522
+2013-08-27 01:14:03,056+0000 INFO ReadBuffer RB-LR-Handler(tag: 182, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,056+0000 INFO ReadBuffer RB-LR-Handler(tag: 182, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,056+0000 INFO LocalIOProvider LR-Handler(tag: 182, GET) rbuf: RB-LR-Handler(tag: 182, GET)
+2013-08-27 01:14:03,056+0000 INFO GetFileHandler Handler(tag: 182, GET) unregistering (last)
+2013-08-27 01:14:03,056+0000 INFO GetFileHandler Handler(tag: 3065, GET) unregistering (last)
+2013-08-27 01:14:03,056+0000 INFO ReadBuffer RB-LR-Handler(tag: 182, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,056+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,056+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,056+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,056+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,057+0000 INFO GetFileHandler Handler(tag: 3066, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,057+0000 INFO GetFileHandler Handler(tag: 3066, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,057+0000 INFO GetFileHandler Handler(tag: 3066, GET) -> 183
+2013-08-27 01:14:03,057+0000 INFO GetFileHandler Handler(tag: 183, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,057+0000 INFO GetFileHandler Handler(tag: 183, GET) reader: LR-Handler(tag: 183, GET)
+2013-08-27 01:14:03,057+0000 INFO GetFileHandler Handler(tag: 183, GET) sending length: 148937, 137489369
+2013-08-27 01:14:03,057+0000 INFO GetFileHandler Handler(tag: 3066, GET) sending length: 148937, 91420611
+2013-08-27 01:14:03,057+0000 INFO ReadBuffer RB-LR-Handler(tag: 183, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,057+0000 INFO ReadBuffer RB-LR-Handler(tag: 183, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,057+0000 INFO LocalIOProvider LR-Handler(tag: 183, GET) rbuf: RB-LR-Handler(tag: 183, GET)
+2013-08-27 01:14:03,057+0000 INFO GetFileHandler Handler(tag: 183, GET) unregistering (last)
+2013-08-27 01:14:03,057+0000 INFO GetFileHandler Handler(tag: 3066, GET) unregistering (last)
+2013-08-27 01:14:03,057+0000 INFO ReadBuffer RB-LR-Handler(tag: 183, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,057+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,057+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,057+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,057+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,059+0000 INFO GetFileHandler Handler(tag: 3067, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,059+0000 INFO GetFileHandler Handler(tag: 3067, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,059+0000 INFO GetFileHandler Handler(tag: 3067, GET) -> 184
+2013-08-27 01:14:03,059+0000 INFO GetFileHandler Handler(tag: 184, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,059+0000 INFO GetFileHandler Handler(tag: 184, GET) reader: LR-Handler(tag: 184, GET)
+2013-08-27 01:14:03,059+0000 INFO GetFileHandler Handler(tag: 184, GET) sending length: 148937, 783837048
+2013-08-27 01:14:03,059+0000 INFO GetFileHandler Handler(tag: 3067, GET) sending length: 148937, 1284575038
+2013-08-27 01:14:03,059+0000 INFO ReadBuffer RB-LR-Handler(tag: 184, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,059+0000 INFO ReadBuffer RB-LR-Handler(tag: 184, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,059+0000 INFO LocalIOProvider LR-Handler(tag: 184, GET) rbuf: RB-LR-Handler(tag: 184, GET)
+2013-08-27 01:14:03,059+0000 INFO GetFileHandler Handler(tag: 184, GET) unregistering (last)
+2013-08-27 01:14:03,059+0000 INFO GetFileHandler Handler(tag: 3067, GET) unregistering (last)
+2013-08-27 01:14:03,059+0000 INFO ReadBuffer RB-LR-Handler(tag: 184, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,059+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,059+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,059+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,059+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,060+0000 INFO GetFileHandler Handler(tag: 3068, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,060+0000 INFO GetFileHandler Handler(tag: 3068, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,060+0000 INFO GetFileHandler Handler(tag: 3068, GET) -> 185
+2013-08-27 01:14:03,060+0000 INFO GetFileHandler Handler(tag: 185, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,060+0000 INFO GetFileHandler Handler(tag: 185, GET) reader: LR-Handler(tag: 185, GET)
+2013-08-27 01:14:03,061+0000 INFO GetFileHandler Handler(tag: 185, GET) sending length: 148937, 523754722
+2013-08-27 01:14:03,061+0000 INFO GetFileHandler Handler(tag: 3068, GET) sending length: 148937, 210143601
+2013-08-27 01:14:03,061+0000 INFO ReadBuffer RB-LR-Handler(tag: 185, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,061+0000 INFO ReadBuffer RB-LR-Handler(tag: 185, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,061+0000 INFO LocalIOProvider LR-Handler(tag: 185, GET) rbuf: RB-LR-Handler(tag: 185, GET)
+2013-08-27 01:14:03,061+0000 INFO GetFileHandler Handler(tag: 185, GET) unregistering (last)
+2013-08-27 01:14:03,061+0000 INFO GetFileHandler Handler(tag: 3068, GET) unregistering (last)
+2013-08-27 01:14:03,061+0000 INFO ReadBuffer RB-LR-Handler(tag: 185, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,061+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,061+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,061+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,061+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,062+0000 INFO GetFileHandler Handler(tag: 3069, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,062+0000 INFO GetFileHandler Handler(tag: 3069, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,062+0000 INFO GetFileHandler Handler(tag: 3069, GET) -> 186
+2013-08-27 01:14:03,062+0000 INFO GetFileHandler Handler(tag: 186, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,062+0000 INFO GetFileHandler Handler(tag: 186, GET) reader: LR-Handler(tag: 186, GET)
+2013-08-27 01:14:03,062+0000 INFO GetFileHandler Handler(tag: 186, GET) sending length: 148937, 1641998555
+2013-08-27 01:14:03,062+0000 INFO GetFileHandler Handler(tag: 3069, GET) sending length: 148937, 1904849935
+2013-08-27 01:14:03,062+0000 INFO ReadBuffer RB-LR-Handler(tag: 186, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,062+0000 INFO ReadBuffer RB-LR-Handler(tag: 186, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,062+0000 INFO LocalIOProvider LR-Handler(tag: 186, GET) rbuf: RB-LR-Handler(tag: 186, GET)
+2013-08-27 01:14:03,062+0000 INFO GetFileHandler Handler(tag: 186, GET) unregistering (last)
+2013-08-27 01:14:03,062+0000 INFO GetFileHandler Handler(tag: 3069, GET) unregistering (last)
+2013-08-27 01:14:03,062+0000 INFO ReadBuffer RB-LR-Handler(tag: 186, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,062+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,062+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,062+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,062+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,064+0000 INFO GetFileHandler Handler(tag: 3070, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,064+0000 INFO GetFileHandler Handler(tag: 3070, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,064+0000 INFO GetFileHandler Handler(tag: 3070, GET) -> 187
+2013-08-27 01:14:03,064+0000 INFO GetFileHandler Handler(tag: 187, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,064+0000 INFO GetFileHandler Handler(tag: 187, GET) reader: LR-Handler(tag: 187, GET)
+2013-08-27 01:14:03,064+0000 INFO GetFileHandler Handler(tag: 187, GET) sending length: 543, 1191209411
+2013-08-27 01:14:03,064+0000 INFO GetFileHandler Handler(tag: 3070, GET) sending length: 543, 1814013343
+2013-08-27 01:14:03,064+0000 INFO ReadBuffer RB-LR-Handler(tag: 187, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,064+0000 INFO ReadBuffer RB-LR-Handler(tag: 187, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,064+0000 INFO LocalIOProvider LR-Handler(tag: 187, GET) rbuf: RB-LR-Handler(tag: 187, GET)
+2013-08-27 01:14:03,064+0000 INFO GetFileHandler Handler(tag: 187, GET) unregistering (last)
+2013-08-27 01:14:03,065+0000 INFO GetFileHandler Handler(tag: 3070, GET) unregistering (last)
+2013-08-27 01:14:03,065+0000 INFO GetFileHandler Handler(tag: 3071, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,065+0000 INFO ReadBuffer RB-LR-Handler(tag: 187, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,065+0000 INFO GetFileHandler Handler(tag: 3071, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,065+0000 INFO GetFileHandler Handler(tag: 3071, GET) -> 188
+2013-08-27 01:14:03,065+0000 INFO GetFileHandler Handler(tag: 188, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,065+0000 INFO GetFileHandler Handler(tag: 188, GET) reader: LR-Handler(tag: 188, GET)
+2013-08-27 01:14:03,065+0000 INFO GetFileHandler Handler(tag: 188, GET) sending length: 2093, 813732571
+2013-08-27 01:14:03,065+0000 INFO GetFileHandler Handler(tag: 3071, GET) sending length: 2093, 1227456701
+2013-08-27 01:14:03,065+0000 INFO ReadBuffer RB-LR-Handler(tag: 188, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,065+0000 INFO ReadBuffer RB-LR-Handler(tag: 188, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,065+0000 INFO LocalIOProvider LR-Handler(tag: 188, GET) rbuf: RB-LR-Handler(tag: 188, GET)
+2013-08-27 01:14:03,065+0000 INFO GetFileHandler Handler(tag: 188, GET) unregistering (last)
+2013-08-27 01:14:03,065+0000 INFO ReadBuffer RB-LR-Handler(tag: 188, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,065+0000 INFO GetFileHandler Handler(tag: 3071, GET) unregistering (last)
+2013-08-27 01:14:03,067+0000 INFO GetFileHandler Handler(tag: 3072, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,067+0000 INFO GetFileHandler Handler(tag: 3072, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,067+0000 INFO GetFileHandler Handler(tag: 3072, GET) -> 189
+2013-08-27 01:14:03,067+0000 INFO GetFileHandler Handler(tag: 189, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,067+0000 INFO GetFileHandler Handler(tag: 189, GET) reader: LR-Handler(tag: 189, GET)
+2013-08-27 01:14:03,067+0000 INFO GetFileHandler Handler(tag: 189, GET) sending length: 543, 1363276325
+2013-08-27 01:14:03,067+0000 INFO GetFileHandler Handler(tag: 3072, GET) sending length: 543, 1082164432
+2013-08-27 01:14:03,067+0000 INFO ReadBuffer RB-LR-Handler(tag: 189, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,067+0000 INFO ReadBuffer RB-LR-Handler(tag: 189, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,067+0000 INFO LocalIOProvider LR-Handler(tag: 189, GET) rbuf: RB-LR-Handler(tag: 189, GET)
+2013-08-27 01:14:03,067+0000 INFO GetFileHandler Handler(tag: 189, GET) unregistering (last)
+2013-08-27 01:14:03,067+0000 INFO ReadBuffer RB-LR-Handler(tag: 189, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,067+0000 INFO GetFileHandler Handler(tag: 3072, GET) unregistering (last)
+2013-08-27 01:14:03,069+0000 INFO GetFileHandler Handler(tag: 3073, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,069+0000 INFO GetFileHandler Handler(tag: 3073, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,069+0000 INFO GetFileHandler Handler(tag: 3073, GET) -> 190
+2013-08-27 01:14:03,069+0000 INFO GetFileHandler Handler(tag: 190, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,069+0000 INFO GetFileHandler Handler(tag: 190, GET) reader: LR-Handler(tag: 190, GET)
+2013-08-27 01:14:03,069+0000 INFO GetFileHandler Handler(tag: 190, GET) sending length: 543, 1851880922
+2013-08-27 01:14:03,069+0000 INFO GetFileHandler Handler(tag: 3073, GET) sending length: 543, 1082160083
+2013-08-27 01:14:03,070+0000 INFO ReadBuffer RB-LR-Handler(tag: 190, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,070+0000 INFO ReadBuffer RB-LR-Handler(tag: 190, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,070+0000 INFO LocalIOProvider LR-Handler(tag: 190, GET) rbuf: RB-LR-Handler(tag: 190, GET)
+2013-08-27 01:14:03,070+0000 INFO GetFileHandler Handler(tag: 190, GET) unregistering (last)
+2013-08-27 01:14:03,070+0000 INFO ReadBuffer RB-LR-Handler(tag: 190, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,070+0000 INFO GetFileHandler Handler(tag: 3073, GET) unregistering (last)
+2013-08-27 01:14:03,072+0000 INFO GetFileHandler Handler(tag: 3074, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,072+0000 INFO GetFileHandler Handler(tag: 3074, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,072+0000 INFO GetFileHandler Handler(tag: 3074, GET) -> 191
+2013-08-27 01:14:03,072+0000 INFO GetFileHandler Handler(tag: 191, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,072+0000 INFO GetFileHandler Handler(tag: 191, GET) reader: LR-Handler(tag: 191, GET)
+2013-08-27 01:14:03,072+0000 INFO GetFileHandler Handler(tag: 191, GET) sending length: 543, 1841754451
+2013-08-27 01:14:03,072+0000 INFO GetFileHandler Handler(tag: 3074, GET) sending length: 543, 537770099
+2013-08-27 01:14:03,072+0000 INFO ReadBuffer RB-LR-Handler(tag: 191, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,072+0000 INFO ReadBuffer RB-LR-Handler(tag: 191, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,072+0000 INFO LocalIOProvider LR-Handler(tag: 191, GET) rbuf: RB-LR-Handler(tag: 191, GET)
+2013-08-27 01:14:03,072+0000 INFO GetFileHandler Handler(tag: 191, GET) unregistering (last)
+2013-08-27 01:14:03,072+0000 INFO ReadBuffer RB-LR-Handler(tag: 191, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,072+0000 INFO GetFileHandler Handler(tag: 3074, GET) unregistering (last)
+2013-08-27 01:14:03,075+0000 INFO GetFileHandler Handler(tag: 3075, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,075+0000 INFO GetFileHandler Handler(tag: 3075, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,075+0000 INFO GetFileHandler Handler(tag: 3075, GET) -> 192
+2013-08-27 01:14:03,075+0000 INFO GetFileHandler Handler(tag: 192, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,075+0000 INFO GetFileHandler Handler(tag: 192, GET) reader: LR-Handler(tag: 192, GET)
+2013-08-27 01:14:03,075+0000 INFO GetFileHandler Handler(tag: 192, GET) sending length: 543, 15244440
+2013-08-27 01:14:03,075+0000 INFO GetFileHandler Handler(tag: 3075, GET) sending length: 543, 662749087
+2013-08-27 01:14:03,075+0000 INFO ReadBuffer RB-LR-Handler(tag: 192, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,075+0000 INFO ReadBuffer RB-LR-Handler(tag: 192, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,075+0000 INFO LocalIOProvider LR-Handler(tag: 192, GET) rbuf: RB-LR-Handler(tag: 192, GET)
+2013-08-27 01:14:03,075+0000 INFO GetFileHandler Handler(tag: 192, GET) unregistering (last)
+2013-08-27 01:14:03,075+0000 INFO ReadBuffer RB-LR-Handler(tag: 192, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,075+0000 INFO GetFileHandler Handler(tag: 3075, GET) unregistering (last)
+2013-08-27 01:14:03,077+0000 INFO GetFileHandler Handler(tag: 3076, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,077+0000 INFO GetFileHandler Handler(tag: 3076, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,077+0000 INFO GetFileHandler Handler(tag: 3076, GET) -> 193
+2013-08-27 01:14:03,077+0000 INFO GetFileHandler Handler(tag: 193, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,077+0000 INFO GetFileHandler Handler(tag: 193, GET) reader: LR-Handler(tag: 193, GET)
+2013-08-27 01:14:03,077+0000 INFO GetFileHandler Handler(tag: 193, GET) sending length: 543, 383169910
+2013-08-27 01:14:03,077+0000 INFO GetFileHandler Handler(tag: 3076, GET) sending length: 543, 1780703664
+2013-08-27 01:14:03,077+0000 INFO ReadBuffer RB-LR-Handler(tag: 193, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,077+0000 INFO ReadBuffer RB-LR-Handler(tag: 193, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,077+0000 INFO LocalIOProvider LR-Handler(tag: 193, GET) rbuf: RB-LR-Handler(tag: 193, GET)
+2013-08-27 01:14:03,077+0000 INFO GetFileHandler Handler(tag: 193, GET) unregistering (last)
+2013-08-27 01:14:03,077+0000 INFO ReadBuffer RB-LR-Handler(tag: 193, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,077+0000 INFO GetFileHandler Handler(tag: 3076, GET) unregistering (last)
+2013-08-27 01:14:03,080+0000 INFO GetFileHandler Handler(tag: 3077, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,080+0000 INFO GetFileHandler Handler(tag: 3077, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,080+0000 INFO GetFileHandler Handler(tag: 3077, GET) -> 194
+2013-08-27 01:14:03,080+0000 INFO GetFileHandler Handler(tag: 194, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,080+0000 INFO GetFileHandler Handler(tag: 194, GET) reader: LR-Handler(tag: 194, GET)
+2013-08-27 01:14:03,080+0000 INFO GetFileHandler Handler(tag: 194, GET) sending length: 543, 1544057083
+2013-08-27 01:14:03,080+0000 INFO GetFileHandler Handler(tag: 3077, GET) sending length: 543, 775003633
+2013-08-27 01:14:03,080+0000 INFO ReadBuffer RB-LR-Handler(tag: 194, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,080+0000 INFO ReadBuffer RB-LR-Handler(tag: 194, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,080+0000 INFO LocalIOProvider LR-Handler(tag: 194, GET) rbuf: RB-LR-Handler(tag: 194, GET)
+2013-08-27 01:14:03,080+0000 INFO GetFileHandler Handler(tag: 194, GET) unregistering (last)
+2013-08-27 01:14:03,080+0000 INFO GetFileHandler Handler(tag: 3078, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,080+0000 INFO GetFileHandler Handler(tag: 3077, GET) unregistering (last)
+2013-08-27 01:14:03,080+0000 INFO ReadBuffer RB-LR-Handler(tag: 194, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,080+0000 INFO GetFileHandler Handler(tag: 3078, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,080+0000 INFO GetFileHandler Handler(tag: 3078, GET) -> 195
+2013-08-27 01:14:03,080+0000 INFO GetFileHandler Handler(tag: 195, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,080+0000 INFO GetFileHandler Handler(tag: 195, GET) reader: LR-Handler(tag: 195, GET)
+2013-08-27 01:14:03,080+0000 INFO GetFileHandler Handler(tag: 195, GET) sending length: 2093, 1154926722
+2013-08-27 01:14:03,080+0000 INFO GetFileHandler Handler(tag: 3078, GET) sending length: 2093, 1896215068
+2013-08-27 01:14:03,080+0000 INFO ReadBuffer RB-LR-Handler(tag: 195, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,080+0000 INFO ReadBuffer RB-LR-Handler(tag: 195, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,080+0000 INFO LocalIOProvider LR-Handler(tag: 195, GET) rbuf: RB-LR-Handler(tag: 195, GET)
+2013-08-27 01:14:03,080+0000 INFO GetFileHandler Handler(tag: 195, GET) unregistering (last)
+2013-08-27 01:14:03,080+0000 INFO GetFileHandler Handler(tag: 3078, GET) unregistering (last)
+2013-08-27 01:14:03,080+0000 INFO ReadBuffer RB-LR-Handler(tag: 195, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,082+0000 INFO GetFileHandler Handler(tag: 3079, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,082+0000 INFO GetFileHandler Handler(tag: 3079, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,082+0000 INFO GetFileHandler Handler(tag: 3079, GET) -> 196
+2013-08-27 01:14:03,082+0000 INFO GetFileHandler Handler(tag: 196, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,082+0000 INFO GetFileHandler Handler(tag: 196, GET) reader: LR-Handler(tag: 196, GET)
+2013-08-27 01:14:03,082+0000 INFO GetFileHandler Handler(tag: 196, GET) sending length: 543, 682231079
+2013-08-27 01:14:03,082+0000 INFO GetFileHandler Handler(tag: 3079, GET) sending length: 543, 842553420
+2013-08-27 01:14:03,082+0000 INFO ReadBuffer RB-LR-Handler(tag: 196, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,082+0000 INFO ReadBuffer RB-LR-Handler(tag: 196, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,082+0000 INFO LocalIOProvider LR-Handler(tag: 196, GET) rbuf: RB-LR-Handler(tag: 196, GET)
+2013-08-27 01:14:03,082+0000 INFO GetFileHandler Handler(tag: 196, GET) unregistering (last)
+2013-08-27 01:14:03,082+0000 INFO ReadBuffer RB-LR-Handler(tag: 196, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,082+0000 INFO GetFileHandler Handler(tag: 3079, GET) unregistering (last)
+2013-08-27 01:14:03,082+0000 INFO GetFileHandler Handler(tag: 3080, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,082+0000 INFO GetFileHandler Handler(tag: 3080, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,083+0000 INFO GetFileHandler Handler(tag: 3080, GET) -> 197
+2013-08-27 01:14:03,083+0000 INFO GetFileHandler Handler(tag: 197, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,083+0000 INFO GetFileHandler Handler(tag: 197, GET) reader: LR-Handler(tag: 197, GET)
+2013-08-27 01:14:03,083+0000 INFO GetFileHandler Handler(tag: 197, GET) sending length: 2093, 2030607121
+2013-08-27 01:14:03,083+0000 INFO GetFileHandler Handler(tag: 3080, GET) sending length: 2093, 603764523
+2013-08-27 01:14:03,083+0000 INFO ReadBuffer RB-LR-Handler(tag: 197, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,083+0000 INFO ReadBuffer RB-LR-Handler(tag: 197, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,083+0000 INFO LocalIOProvider LR-Handler(tag: 197, GET) rbuf: RB-LR-Handler(tag: 197, GET)
+2013-08-27 01:14:03,083+0000 INFO GetFileHandler Handler(tag: 197, GET) unregistering (last)
+2013-08-27 01:14:03,083+0000 INFO ReadBuffer RB-LR-Handler(tag: 197, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,083+0000 INFO GetFileHandler Handler(tag: 3080, GET) unregistering (last)
+2013-08-27 01:14:03,085+0000 INFO GetFileHandler Handler(tag: 3081, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,085+0000 INFO GetFileHandler Handler(tag: 3081, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,085+0000 INFO GetFileHandler Handler(tag: 3081, GET) -> 198
+2013-08-27 01:14:03,085+0000 INFO GetFileHandler Handler(tag: 198, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,085+0000 INFO GetFileHandler Handler(tag: 198, GET) reader: LR-Handler(tag: 198, GET)
+2013-08-27 01:14:03,085+0000 INFO GetFileHandler Handler(tag: 198, GET) sending length: 543, 2074868858
+2013-08-27 01:14:03,085+0000 INFO GetFileHandler Handler(tag: 3081, GET) sending length: 543, 1481436420
+2013-08-27 01:14:03,085+0000 INFO ReadBuffer RB-LR-Handler(tag: 198, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,085+0000 INFO ReadBuffer RB-LR-Handler(tag: 198, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,085+0000 INFO LocalIOProvider LR-Handler(tag: 198, GET) rbuf: RB-LR-Handler(tag: 198, GET)
+2013-08-27 01:14:03,085+0000 INFO GetFileHandler Handler(tag: 198, GET) unregistering (last)
+2013-08-27 01:14:03,085+0000 INFO ReadBuffer RB-LR-Handler(tag: 198, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,085+0000 INFO GetFileHandler Handler(tag: 3081, GET) unregistering (last)
+2013-08-27 01:14:03,087+0000 INFO GetFileHandler Handler(tag: 3082, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,087+0000 INFO GetFileHandler Handler(tag: 3082, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,087+0000 INFO GetFileHandler Handler(tag: 3082, GET) -> 199
+2013-08-27 01:14:03,087+0000 INFO GetFileHandler Handler(tag: 199, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,087+0000 INFO GetFileHandler Handler(tag: 199, GET) reader: LR-Handler(tag: 199, GET)
+2013-08-27 01:14:03,087+0000 INFO GetFileHandler Handler(tag: 199, GET) sending length: 543, 1900896764
+2013-08-27 01:14:03,087+0000 INFO GetFileHandler Handler(tag: 3082, GET) sending length: 543, 257696129
+2013-08-27 01:14:03,087+0000 INFO ReadBuffer RB-LR-Handler(tag: 199, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,087+0000 INFO ReadBuffer RB-LR-Handler(tag: 199, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,087+0000 INFO LocalIOProvider LR-Handler(tag: 199, GET) rbuf: RB-LR-Handler(tag: 199, GET)
+2013-08-27 01:14:03,087+0000 INFO GetFileHandler Handler(tag: 199, GET) unregistering (last)
+2013-08-27 01:14:03,087+0000 INFO ReadBuffer RB-LR-Handler(tag: 199, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,087+0000 INFO GetFileHandler Handler(tag: 3082, GET) unregistering (last)
+2013-08-27 01:14:03,089+0000 INFO GetFileHandler Handler(tag: 3083, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,089+0000 INFO GetFileHandler Handler(tag: 3083, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,089+0000 INFO GetFileHandler Handler(tag: 3083, GET) -> 200
+2013-08-27 01:14:03,089+0000 INFO GetFileHandler Handler(tag: 200, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,089+0000 INFO GetFileHandler Handler(tag: 200, GET) reader: LR-Handler(tag: 200, GET)
+2013-08-27 01:14:03,089+0000 INFO GetFileHandler Handler(tag: 200, GET) sending length: 543, 1587291032
+2013-08-27 01:14:03,089+0000 INFO GetFileHandler Handler(tag: 3083, GET) sending length: 543, 1558511790
+2013-08-27 01:14:03,089+0000 INFO ReadBuffer RB-LR-Handler(tag: 200, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,089+0000 INFO ReadBuffer RB-LR-Handler(tag: 200, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,089+0000 INFO LocalIOProvider LR-Handler(tag: 200, GET) rbuf: RB-LR-Handler(tag: 200, GET)
+2013-08-27 01:14:03,089+0000 INFO GetFileHandler Handler(tag: 200, GET) unregistering (last)
+2013-08-27 01:14:03,089+0000 INFO ReadBuffer RB-LR-Handler(tag: 200, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,089+0000 INFO GetFileHandler Handler(tag: 3083, GET) unregistering (last)
+2013-08-27 01:14:03,091+0000 INFO GetFileHandler Handler(tag: 3084, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,091+0000 INFO GetFileHandler Handler(tag: 3084, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,091+0000 INFO GetFileHandler Handler(tag: 3084, GET) -> 201
+2013-08-27 01:14:03,091+0000 INFO GetFileHandler Handler(tag: 201, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,092+0000 INFO GetFileHandler Handler(tag: 201, GET) reader: LR-Handler(tag: 201, GET)
+2013-08-27 01:14:03,092+0000 INFO GetFileHandler Handler(tag: 201, GET) sending length: 543, 1787983760
+2013-08-27 01:14:03,092+0000 INFO GetFileHandler Handler(tag: 3084, GET) sending length: 543, 904381849
+2013-08-27 01:14:03,092+0000 INFO ReadBuffer RB-LR-Handler(tag: 201, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,092+0000 INFO ReadBuffer RB-LR-Handler(tag: 201, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,092+0000 INFO LocalIOProvider LR-Handler(tag: 201, GET) rbuf: RB-LR-Handler(tag: 201, GET)
+2013-08-27 01:14:03,092+0000 INFO GetFileHandler Handler(tag: 201, GET) unregistering (last)
+2013-08-27 01:14:03,092+0000 INFO GetFileHandler Handler(tag: 3084, GET) unregistering (last)
+2013-08-27 01:14:03,092+0000 INFO ReadBuffer RB-LR-Handler(tag: 201, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,093+0000 INFO GetFileHandler Handler(tag: 3085, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,093+0000 INFO GetFileHandler Handler(tag: 3085, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,093+0000 INFO GetFileHandler Handler(tag: 3085, GET) -> 202
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 202, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 202, GET) reader: LR-Handler(tag: 202, GET)
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 202, GET) sending length: 543, 758111104
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 3085, GET) sending length: 543, 552847277
+2013-08-27 01:14:03,094+0000 INFO ReadBuffer RB-LR-Handler(tag: 202, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,094+0000 INFO ReadBuffer RB-LR-Handler(tag: 202, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,094+0000 INFO LocalIOProvider LR-Handler(tag: 202, GET) rbuf: RB-LR-Handler(tag: 202, GET)
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 202, GET) unregistering (last)
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 3086, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,094+0000 INFO ReadBuffer RB-LR-Handler(tag: 202, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 3085, GET) unregistering (last)
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 3086, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 3086, GET) -> 203
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 203, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 203, GET) reader: LR-Handler(tag: 203, GET)
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 203, GET) sending length: 2093, 1026776958
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 3086, GET) sending length: 2093, 2009229461
+2013-08-27 01:14:03,094+0000 INFO ReadBuffer RB-LR-Handler(tag: 203, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,094+0000 INFO ReadBuffer RB-LR-Handler(tag: 203, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,094+0000 INFO LocalIOProvider LR-Handler(tag: 203, GET) rbuf: RB-LR-Handler(tag: 203, GET)
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 3087, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 203, GET) unregistering (last)
+2013-08-27 01:14:03,094+0000 INFO ReadBuffer RB-LR-Handler(tag: 203, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 3086, GET) unregistering (last)
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 3087, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 3087, GET) -> 204
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 204, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 204, GET) reader: LR-Handler(tag: 204, GET)
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 204, GET) sending length: 5032, 567175767
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 3087, GET) sending length: 5032, 1990690583
+2013-08-27 01:14:03,094+0000 INFO ReadBuffer RB-LR-Handler(tag: 204, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,094+0000 INFO ReadBuffer RB-LR-Handler(tag: 204, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,094+0000 INFO LocalIOProvider LR-Handler(tag: 204, GET) rbuf: RB-LR-Handler(tag: 204, GET)
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 204, GET) unregistering (last)
+2013-08-27 01:14:03,094+0000 INFO ReadBuffer RB-LR-Handler(tag: 204, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 3087, GET) unregistering (last)
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 3088, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 3088, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 3088, GET) -> 205
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 205, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 205, GET) reader: LR-Handler(tag: 205, GET)
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 205, GET) sending length: 2093, 960635056
+2013-08-27 01:14:03,094+0000 INFO GetFileHandler Handler(tag: 3088, GET) sending length: 2093, 611328046
+2013-08-27 01:14:03,094+0000 INFO ReadBuffer RB-LR-Handler(tag: 205, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,094+0000 INFO ReadBuffer RB-LR-Handler(tag: 205, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,095+0000 INFO LocalIOProvider LR-Handler(tag: 205, GET) rbuf: RB-LR-Handler(tag: 205, GET)
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 3089, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 205, GET) unregistering (last)
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 3088, GET) unregistering (last)
+2013-08-27 01:14:03,095+0000 INFO ReadBuffer RB-LR-Handler(tag: 205, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 3089, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 3089, GET) -> 206
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 206, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 206, GET) reader: LR-Handler(tag: 206, GET)
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 206, GET) sending length: 2093, 472445342
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 3089, GET) sending length: 2093, 1141820035
+2013-08-27 01:14:03,095+0000 INFO ReadBuffer RB-LR-Handler(tag: 206, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,095+0000 INFO ReadBuffer RB-LR-Handler(tag: 206, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,095+0000 INFO LocalIOProvider LR-Handler(tag: 206, GET) rbuf: RB-LR-Handler(tag: 206, GET)
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 206, GET) unregistering (last)
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 3090, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,095+0000 INFO ReadBuffer RB-LR-Handler(tag: 206, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 3089, GET) unregistering (last)
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 3090, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 3090, GET) -> 207
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 207, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 207, GET) reader: LR-Handler(tag: 207, GET)
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 207, GET) sending length: 2093, 1472287907
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 3090, GET) sending length: 2093, 1436272215
+2013-08-27 01:14:03,095+0000 INFO ReadBuffer RB-LR-Handler(tag: 207, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 3091, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,095+0000 INFO ReadBuffer RB-LR-Handler(tag: 207, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,095+0000 INFO LocalIOProvider LR-Handler(tag: 207, GET) rbuf: RB-LR-Handler(tag: 207, GET)
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 207, GET) unregistering (last)
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 3091, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,095+0000 INFO ReadBuffer RB-LR-Handler(tag: 207, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 3090, GET) unregistering (last)
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 3091, GET) -> 208
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 208, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 208, GET) reader: LR-Handler(tag: 208, GET)
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 208, GET) sending length: 2093, 338029290
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 3091, GET) sending length: 2093, 1164030715
+2013-08-27 01:14:03,095+0000 INFO ReadBuffer RB-LR-Handler(tag: 208, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,095+0000 INFO ReadBuffer RB-LR-Handler(tag: 208, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,095+0000 INFO LocalIOProvider LR-Handler(tag: 208, GET) rbuf: RB-LR-Handler(tag: 208, GET)
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 208, GET) unregistering (last)
+2013-08-27 01:14:03,095+0000 INFO ReadBuffer RB-LR-Handler(tag: 208, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 3091, GET) unregistering (last)
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 3092, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 3092, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 3092, GET) -> 209
+2013-08-27 01:14:03,095+0000 INFO GetFileHandler Handler(tag: 209, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 209, GET) reader: LR-Handler(tag: 209, GET)
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 209, GET) sending length: 2093, 630205034
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 3092, GET) sending length: 2093, 466659434
+2013-08-27 01:14:03,096+0000 INFO ReadBuffer RB-LR-Handler(tag: 209, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,096+0000 INFO ReadBuffer RB-LR-Handler(tag: 209, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,096+0000 INFO LocalIOProvider LR-Handler(tag: 209, GET) rbuf: RB-LR-Handler(tag: 209, GET)
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 209, GET) unregistering (last)
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 3093, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 3092, GET) unregistering (last)
+2013-08-27 01:14:03,096+0000 INFO ReadBuffer RB-LR-Handler(tag: 209, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 3093, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 3093, GET) -> 210
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 210, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 210, GET) reader: LR-Handler(tag: 210, GET)
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 210, GET) sending length: 2093, 997520141
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 3093, GET) sending length: 2093, 2063661305
+2013-08-27 01:14:03,096+0000 INFO ReadBuffer RB-LR-Handler(tag: 210, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,096+0000 INFO ReadBuffer RB-LR-Handler(tag: 210, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,096+0000 INFO LocalIOProvider LR-Handler(tag: 210, GET) rbuf: RB-LR-Handler(tag: 210, GET)
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 210, GET) unregistering (last)
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 3093, GET) unregistering (last)
+2013-08-27 01:14:03,096+0000 INFO ReadBuffer RB-LR-Handler(tag: 210, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 3094, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 3094, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 3094, GET) -> 211
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 211, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 211, GET) reader: LR-Handler(tag: 211, GET)
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 211, GET) sending length: 5032, 1682698427
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 3094, GET) sending length: 5032, 900315246
+2013-08-27 01:14:03,096+0000 INFO ReadBuffer RB-LR-Handler(tag: 211, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,096+0000 INFO ReadBuffer RB-LR-Handler(tag: 211, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,096+0000 INFO LocalIOProvider LR-Handler(tag: 211, GET) rbuf: RB-LR-Handler(tag: 211, GET)
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 211, GET) unregistering (last)
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 3095, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 3094, GET) unregistering (last)
+2013-08-27 01:14:03,096+0000 INFO ReadBuffer RB-LR-Handler(tag: 211, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 3095, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 3095, GET) -> 212
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 212, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 212, GET) reader: LR-Handler(tag: 212, GET)
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 212, GET) sending length: 2093, 883641278
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 3095, GET) sending length: 2093, 1509540341
+2013-08-27 01:14:03,096+0000 INFO ReadBuffer RB-LR-Handler(tag: 212, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,096+0000 INFO ReadBuffer RB-LR-Handler(tag: 212, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,096+0000 INFO LocalIOProvider LR-Handler(tag: 212, GET) rbuf: RB-LR-Handler(tag: 212, GET)
+2013-08-27 01:14:03,096+0000 INFO GetFileHandler Handler(tag: 212, GET) unregistering (last)
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 3095, GET) unregistering (last)
+2013-08-27 01:14:03,097+0000 INFO ReadBuffer RB-LR-Handler(tag: 212, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 3096, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 3096, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 3096, GET) -> 213
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 213, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 213, GET) reader: LR-Handler(tag: 213, GET)
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 213, GET) sending length: 5032, 1166982606
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 3096, GET) sending length: 5032, 508510991
+2013-08-27 01:14:03,097+0000 INFO ReadBuffer RB-LR-Handler(tag: 213, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,097+0000 INFO ReadBuffer RB-LR-Handler(tag: 213, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,097+0000 INFO LocalIOProvider LR-Handler(tag: 213, GET) rbuf: RB-LR-Handler(tag: 213, GET)
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 213, GET) unregistering (last)
+2013-08-27 01:14:03,097+0000 INFO ReadBuffer RB-LR-Handler(tag: 213, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 3096, GET) unregistering (last)
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 3097, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 3097, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 3097, GET) -> 214
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 214, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 214, GET) reader: LR-Handler(tag: 214, GET)
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 214, GET) sending length: 2093, 1865721865
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 3097, GET) sending length: 2093, 1778655208
+2013-08-27 01:14:03,097+0000 INFO ReadBuffer RB-LR-Handler(tag: 214, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,097+0000 INFO ReadBuffer RB-LR-Handler(tag: 214, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,097+0000 INFO LocalIOProvider LR-Handler(tag: 214, GET) rbuf: RB-LR-Handler(tag: 214, GET)
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+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 214, GET) unregistering (last)
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 3097, GET) unregistering (last)
+2013-08-27 01:14:03,097+0000 INFO ReadBuffer RB-LR-Handler(tag: 214, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 3098, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 3098, GET) -> 215
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 215, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 215, GET) reader: LR-Handler(tag: 215, GET)
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 215, GET) sending length: 2093, 1019898453
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 3098, GET) sending length: 2093, 218829217
+2013-08-27 01:14:03,097+0000 INFO ReadBuffer RB-LR-Handler(tag: 215, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,097+0000 INFO ReadBuffer RB-LR-Handler(tag: 215, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,097+0000 INFO LocalIOProvider LR-Handler(tag: 215, GET) rbuf: RB-LR-Handler(tag: 215, GET)
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 215, GET) unregistering (last)
+2013-08-27 01:14:03,097+0000 INFO ReadBuffer RB-LR-Handler(tag: 215, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 3098, GET) unregistering (last)
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 3099, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 3099, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,097+0000 INFO GetFileHandler Handler(tag: 3099, GET) -> 216
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 216, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 216, GET) reader: LR-Handler(tag: 216, GET)
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 216, GET) sending length: 2093, 872217871
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 3099, GET) sending length: 2093, 642383475
+2013-08-27 01:14:03,098+0000 INFO ReadBuffer RB-LR-Handler(tag: 216, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 3100, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,098+0000 INFO ReadBuffer RB-LR-Handler(tag: 216, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,098+0000 INFO LocalIOProvider LR-Handler(tag: 216, GET) rbuf: RB-LR-Handler(tag: 216, GET)
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 216, GET) unregistering (last)
+2013-08-27 01:14:03,098+0000 INFO ReadBuffer RB-LR-Handler(tag: 216, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 3099, GET) unregistering (last)
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 3100, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 3100, GET) -> 217
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 217, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 217, GET) reader: LR-Handler(tag: 217, GET)
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 217, GET) sending length: 2093, 719362507
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 3100, GET) sending length: 2093, 2140206186
+2013-08-27 01:14:03,098+0000 INFO ReadBuffer RB-LR-Handler(tag: 217, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,098+0000 INFO ReadBuffer RB-LR-Handler(tag: 217, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,098+0000 INFO LocalIOProvider LR-Handler(tag: 217, GET) rbuf: RB-LR-Handler(tag: 217, GET)
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 3101, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 217, GET) unregistering (last)
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 3100, GET) unregistering (last)
+2013-08-27 01:14:03,098+0000 INFO ReadBuffer RB-LR-Handler(tag: 217, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 3101, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 3101, GET) -> 218
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 218, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 218, GET) reader: LR-Handler(tag: 218, GET)
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 218, GET) sending length: 2093, 445936141
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 3101, GET) sending length: 2093, 130793757
+2013-08-27 01:14:03,098+0000 INFO ReadBuffer RB-LR-Handler(tag: 218, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,098+0000 INFO ReadBuffer RB-LR-Handler(tag: 218, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,098+0000 INFO LocalIOProvider LR-Handler(tag: 218, GET) rbuf: RB-LR-Handler(tag: 218, GET)
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 3102, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 218, GET) unregistering (last)
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 3101, GET) unregistering (last)
+2013-08-27 01:14:03,098+0000 INFO ReadBuffer RB-LR-Handler(tag: 218, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 3102, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 3102, GET) -> 219
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 219, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 219, GET) reader: LR-Handler(tag: 219, GET)
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 219, GET) sending length: 5032, 1261965694
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 3102, GET) sending length: 5032, 1308921286
+2013-08-27 01:14:03,098+0000 INFO ReadBuffer RB-LR-Handler(tag: 219, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,098+0000 INFO ReadBuffer RB-LR-Handler(tag: 219, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,098+0000 INFO LocalIOProvider LR-Handler(tag: 219, GET) rbuf: RB-LR-Handler(tag: 219, GET)
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 3103, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,098+0000 INFO GetFileHandler Handler(tag: 219, GET) unregistering (last)
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 3102, GET) unregistering (last)
+2013-08-27 01:14:03,099+0000 INFO ReadBuffer RB-LR-Handler(tag: 219, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 3103, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 3103, GET) -> 220
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 220, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 220, GET) reader: LR-Handler(tag: 220, GET)
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 220, GET) sending length: 6078, 1142899061
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 3103, GET) sending length: 6078, 1610779459
+2013-08-27 01:14:03,099+0000 INFO ReadBuffer RB-LR-Handler(tag: 220, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:03,099+0000 INFO ReadBuffer RB-LR-Handler(tag: 220, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 3104, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,099+0000 INFO LocalIOProvider LR-Handler(tag: 220, GET) rbuf: RB-LR-Handler(tag: 220, GET)
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 220, GET) unregistering (last)
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+2013-08-27 01:14:03,099+0000 INFO ReadBuffer RB-LR-Handler(tag: 220, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 3103, GET) unregistering (last)
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 3104, GET) -> 221
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 221, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 221, GET) reader: LR-Handler(tag: 221, GET)
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 221, GET) sending length: 5032, 970015136
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 3104, GET) sending length: 5032, 1496026375
+2013-08-27 01:14:03,099+0000 INFO ReadBuffer RB-LR-Handler(tag: 221, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,099+0000 INFO ReadBuffer RB-LR-Handler(tag: 221, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,099+0000 INFO LocalIOProvider LR-Handler(tag: 221, GET) rbuf: RB-LR-Handler(tag: 221, GET)
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 3105, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 221, GET) unregistering (last)
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 3104, GET) unregistering (last)
+2013-08-27 01:14:03,099+0000 INFO ReadBuffer RB-LR-Handler(tag: 221, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 3105, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 3105, GET) -> 222
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 222, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 222, GET) reader: LR-Handler(tag: 222, GET)
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 222, GET) sending length: 5032, 1942381564
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 3105, GET) sending length: 5032, 1708028101
+2013-08-27 01:14:03,099+0000 INFO ReadBuffer RB-LR-Handler(tag: 222, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,099+0000 INFO ReadBuffer RB-LR-Handler(tag: 222, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,099+0000 INFO LocalIOProvider LR-Handler(tag: 222, GET) rbuf: RB-LR-Handler(tag: 222, GET)
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 222, GET) unregistering (last)
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 3106, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 3105, GET) unregistering (last)
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+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 3106, GET) -> 223
+2013-08-27 01:14:03,099+0000 INFO GetFileHandler Handler(tag: 223, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 223, GET) reader: LR-Handler(tag: 223, GET)
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 223, GET) sending length: 5032, 1701072366
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 3106, GET) sending length: 5032, 473462851
+2013-08-27 01:14:03,100+0000 INFO ReadBuffer RB-LR-Handler(tag: 223, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,100+0000 INFO ReadBuffer RB-LR-Handler(tag: 223, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,100+0000 INFO LocalIOProvider LR-Handler(tag: 223, GET) rbuf: RB-LR-Handler(tag: 223, GET)
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 223, GET) unregistering (last)
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 3107, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,100+0000 INFO ReadBuffer RB-LR-Handler(tag: 223, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 3106, GET) unregistering (last)
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 3107, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 3107, GET) -> 224
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 224, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 224, GET) reader: LR-Handler(tag: 224, GET)
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 224, GET) sending length: 5032, 310439165
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 3107, GET) sending length: 5032, 1313267592
+2013-08-27 01:14:03,100+0000 INFO ReadBuffer RB-LR-Handler(tag: 224, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,100+0000 INFO ReadBuffer RB-LR-Handler(tag: 224, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 3108, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,100+0000 INFO LocalIOProvider LR-Handler(tag: 224, GET) rbuf: RB-LR-Handler(tag: 224, GET)
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 224, GET) unregistering (last)
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 3107, GET) unregistering (last)
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 3108, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,100+0000 INFO ReadBuffer RB-LR-Handler(tag: 224, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 3108, GET) -> 225
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 225, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 225, GET) reader: LR-Handler(tag: 225, GET)
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 225, GET) sending length: 5032, 690610498
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 3108, GET) sending length: 5032, 2089011498
+2013-08-27 01:14:03,100+0000 INFO ReadBuffer RB-LR-Handler(tag: 225, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,100+0000 INFO ReadBuffer RB-LR-Handler(tag: 225, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,100+0000 INFO LocalIOProvider LR-Handler(tag: 225, GET) rbuf: RB-LR-Handler(tag: 225, GET)
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 225, GET) unregistering (last)
+2013-08-27 01:14:03,100+0000 INFO ReadBuffer RB-LR-Handler(tag: 225, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 3108, GET) unregistering (last)
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 3109, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 3109, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 3109, GET) -> 226
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 226, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 226, GET) reader: LR-Handler(tag: 226, GET)
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 226, GET) sending length: 5032, 1528401192
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 3109, GET) sending length: 5032, 1786932177
+2013-08-27 01:14:03,100+0000 INFO ReadBuffer RB-LR-Handler(tag: 226, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,100+0000 INFO ReadBuffer RB-LR-Handler(tag: 226, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,100+0000 INFO GetFileHandler Handler(tag: 3110, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,100+0000 INFO LocalIOProvider LR-Handler(tag: 226, GET) rbuf: RB-LR-Handler(tag: 226, GET)
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 226, GET) unregistering (last)
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 3109, GET) unregistering (last)
+2013-08-27 01:14:03,101+0000 INFO ReadBuffer RB-LR-Handler(tag: 226, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 3110, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 3110, GET) -> 227
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 227, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 227, GET) reader: LR-Handler(tag: 227, GET)
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 227, GET) sending length: 6078, 1544698800
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 3110, GET) sending length: 6078, 822923017
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 3111, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,101+0000 INFO ReadBuffer RB-LR-Handler(tag: 227, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:03,101+0000 INFO ReadBuffer RB-LR-Handler(tag: 227, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,101+0000 INFO LocalIOProvider LR-Handler(tag: 227, GET) rbuf: RB-LR-Handler(tag: 227, GET)
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 3111, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 227, GET) unregistering (last)
+2013-08-27 01:14:03,101+0000 INFO ReadBuffer RB-LR-Handler(tag: 227, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 3110, GET) unregistering (last)
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 3111, GET) -> 228
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 228, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 228, GET) reader: LR-Handler(tag: 228, GET)
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 228, GET) sending length: 5032, 794520776
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 3111, GET) sending length: 5032, 457365186
+2013-08-27 01:14:03,101+0000 INFO ReadBuffer RB-LR-Handler(tag: 228, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 3112, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,101+0000 INFO ReadBuffer RB-LR-Handler(tag: 228, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,101+0000 INFO LocalIOProvider LR-Handler(tag: 228, GET) rbuf: RB-LR-Handler(tag: 228, GET)
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 228, GET) unregistering (last)
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 3111, GET) unregistering (last)
+2013-08-27 01:14:03,101+0000 INFO ReadBuffer RB-LR-Handler(tag: 228, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 3112, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 3112, GET) -> 229
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 229, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 229, GET) reader: LR-Handler(tag: 229, GET)
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 229, GET) sending length: 6078, 1360909638
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 3112, GET) sending length: 6078, 2107445316
+2013-08-27 01:14:03,101+0000 INFO ReadBuffer RB-LR-Handler(tag: 229, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:03,101+0000 INFO ReadBuffer RB-LR-Handler(tag: 229, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 3113, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,101+0000 INFO LocalIOProvider LR-Handler(tag: 229, GET) rbuf: RB-LR-Handler(tag: 229, GET)
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 229, GET) unregistering (last)
+2013-08-27 01:14:03,101+0000 INFO ReadBuffer RB-LR-Handler(tag: 229, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 3113, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 3112, GET) unregistering (last)
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 3113, GET) -> 230
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 230, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,101+0000 INFO GetFileHandler Handler(tag: 230, GET) reader: LR-Handler(tag: 230, GET)
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 230, GET) sending length: 5032, 5445987
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 3113, GET) sending length: 5032, 1336390335
+2013-08-27 01:14:03,102+0000 INFO ReadBuffer RB-LR-Handler(tag: 230, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,102+0000 INFO ReadBuffer RB-LR-Handler(tag: 230, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 3114, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,102+0000 INFO LocalIOProvider LR-Handler(tag: 230, GET) rbuf: RB-LR-Handler(tag: 230, GET)
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 230, GET) unregistering (last)
+2013-08-27 01:14:03,102+0000 INFO ReadBuffer RB-LR-Handler(tag: 230, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 3113, GET) unregistering (last)
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 3114, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 3114, GET) -> 231
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 231, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 231, GET) reader: LR-Handler(tag: 231, GET)
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 231, GET) sending length: 5032, 1894667608
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 3114, GET) sending length: 5032, 790969940
+2013-08-27 01:14:03,102+0000 INFO ReadBuffer RB-LR-Handler(tag: 231, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,102+0000 INFO ReadBuffer RB-LR-Handler(tag: 231, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,102+0000 INFO LocalIOProvider LR-Handler(tag: 231, GET) rbuf: RB-LR-Handler(tag: 231, GET)
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 3115, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 231, GET) unregistering (last)
+2013-08-27 01:14:03,102+0000 INFO ReadBuffer RB-LR-Handler(tag: 231, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 3114, GET) unregistering (last)
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 3115, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 3115, GET) -> 232
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 232, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 232, GET) reader: LR-Handler(tag: 232, GET)
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 232, GET) sending length: 5032, 1739180957
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 3115, GET) sending length: 5032, 1014424982
+2013-08-27 01:14:03,102+0000 INFO ReadBuffer RB-LR-Handler(tag: 232, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,102+0000 INFO ReadBuffer RB-LR-Handler(tag: 232, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,102+0000 INFO LocalIOProvider LR-Handler(tag: 232, GET) rbuf: RB-LR-Handler(tag: 232, GET)
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 3116, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 232, GET) unregistering (last)
+2013-08-27 01:14:03,102+0000 INFO ReadBuffer RB-LR-Handler(tag: 232, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 3115, GET) unregistering (last)
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 3116, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 3116, GET) -> 233
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 233, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 233, GET) reader: LR-Handler(tag: 233, GET)
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 233, GET) sending length: 5032, 476804695
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 3116, GET) sending length: 5032, 1395021908
+2013-08-27 01:14:03,102+0000 INFO ReadBuffer RB-LR-Handler(tag: 233, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,102+0000 INFO ReadBuffer RB-LR-Handler(tag: 233, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,102+0000 INFO LocalIOProvider LR-Handler(tag: 233, GET) rbuf: RB-LR-Handler(tag: 233, GET)
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 3117, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 233, GET) unregistering (last)
+2013-08-27 01:14:03,102+0000 INFO ReadBuffer RB-LR-Handler(tag: 233, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 3116, GET) unregistering (last)
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 3117, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,102+0000 INFO GetFileHandler Handler(tag: 3117, GET) -> 234
+2013-08-27 01:14:03,103+0000 INFO GetFileHandler Handler(tag: 234, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,103+0000 INFO GetFileHandler Handler(tag: 234, GET) reader: LR-Handler(tag: 234, GET)
+2013-08-27 01:14:03,103+0000 INFO GetFileHandler Handler(tag: 234, GET) sending length: 5032, 117281144
+2013-08-27 01:14:03,103+0000 INFO GetFileHandler Handler(tag: 3117, GET) sending length: 5032, 1901682909
+2013-08-27 01:14:03,103+0000 INFO ReadBuffer RB-LR-Handler(tag: 234, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,103+0000 INFO ReadBuffer RB-LR-Handler(tag: 234, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,103+0000 INFO LocalIOProvider LR-Handler(tag: 234, GET) rbuf: RB-LR-Handler(tag: 234, GET)
+2013-08-27 01:14:03,103+0000 INFO GetFileHandler Handler(tag: 234, GET) unregistering (last)
+2013-08-27 01:14:03,103+0000 INFO GetFileHandler Handler(tag: 3118, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,103+0000 INFO GetFileHandler Handler(tag: 3117, GET) unregistering (last)
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+2013-08-27 01:14:03,103+0000 INFO GetFileHandler Handler(tag: 3118, GET) -> 235
+2013-08-27 01:14:03,103+0000 INFO GetFileHandler Handler(tag: 235, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,103+0000 INFO GetFileHandler Handler(tag: 235, GET) reader: LR-Handler(tag: 235, GET)
+2013-08-27 01:14:03,103+0000 INFO GetFileHandler Handler(tag: 235, GET) sending length: 6078, 1850846567
+2013-08-27 01:14:03,103+0000 INFO GetFileHandler Handler(tag: 3118, GET) sending length: 6078, 877624774
+2013-08-27 01:14:03,103+0000 INFO ReadBuffer RB-LR-Handler(tag: 235, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:03,103+0000 INFO ReadBuffer RB-LR-Handler(tag: 235, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,103+0000 INFO LocalIOProvider LR-Handler(tag: 235, GET) rbuf: RB-LR-Handler(tag: 235, GET)
+2013-08-27 01:14:03,103+0000 INFO GetFileHandler Handler(tag: 235, GET) unregistering (last)
+2013-08-27 01:14:03,103+0000 INFO GetFileHandler Handler(tag: 3118, GET) unregistering (last)
+2013-08-27 01:14:03,103+0000 INFO ReadBuffer RB-LR-Handler(tag: 235, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,104+0000 DEBUG Cpu Active workerid=0827-1301520-000000:000000
+2013-08-27 01:14:03,104+0000 INFO RequestHandler Handler(tag: 3119, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,104+0000 INFO RequestHandler Handler(tag: 236, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,104+0000 INFO GetFileHandler Handler(tag: 3120, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,104+0000 INFO GetFileHandler Handler(tag: 3120, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,104+0000 INFO GetFileHandler Handler(tag: 3120, GET) -> 237
+2013-08-27 01:14:03,104+0000 INFO GetFileHandler Handler(tag: 237, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,104+0000 INFO GetFileHandler Handler(tag: 237, GET) reader: LR-Handler(tag: 237, GET)
+2013-08-27 01:14:03,104+0000 INFO GetFileHandler Handler(tag: 237, GET) sending length: 6078, 705361098
+2013-08-27 01:14:03,104+0000 INFO GetFileHandler Handler(tag: 3120, GET) sending length: 6078, 894242646
+2013-08-27 01:14:03,104+0000 INFO ReadBuffer RB-LR-Handler(tag: 237, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:03,104+0000 INFO ReadBuffer RB-LR-Handler(tag: 237, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,104+0000 INFO LocalIOProvider LR-Handler(tag: 237, GET) rbuf: RB-LR-Handler(tag: 237, GET)
+2013-08-27 01:14:03,104+0000 INFO GetFileHandler Handler(tag: 3121, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,104+0000 INFO GetFileHandler Handler(tag: 237, GET) unregistering (last)
+2013-08-27 01:14:03,104+0000 INFO GetFileHandler Handler(tag: 3120, GET) unregistering (last)
+2013-08-27 01:14:03,104+0000 INFO ReadBuffer RB-LR-Handler(tag: 237, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,104+0000 INFO GetFileHandler Handler(tag: 3121, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,104+0000 INFO GetFileHandler Handler(tag: 3121, GET) -> 238
+2013-08-27 01:14:03,104+0000 INFO GetFileHandler Handler(tag: 238, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 238, GET) reader: LR-Handler(tag: 238, GET)
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 238, GET) sending length: 6078, 183756732
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 3122, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,105+0000 INFO ReadBuffer RB-LR-Handler(tag: 238, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 3121, GET) sending length: 6078, 317910338
+2013-08-27 01:14:03,105+0000 INFO ReadBuffer RB-LR-Handler(tag: 238, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,105+0000 INFO LocalIOProvider LR-Handler(tag: 238, GET) rbuf: RB-LR-Handler(tag: 238, GET)
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 3122, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 238, GET) unregistering (last)
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 3122, GET) -> 239
+2013-08-27 01:14:03,105+0000 INFO ReadBuffer RB-LR-Handler(tag: 238, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 3121, GET) unregistering (last)
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 239, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 239, GET) reader: LR-Handler(tag: 239, GET)
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 239, GET) sending length: 6078, 1118901176
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 3122, GET) sending length: 6078, 2005251900
+2013-08-27 01:14:03,105+0000 INFO ReadBuffer RB-LR-Handler(tag: 239, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:03,105+0000 INFO ReadBuffer RB-LR-Handler(tag: 239, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,105+0000 INFO LocalIOProvider LR-Handler(tag: 239, GET) rbuf: RB-LR-Handler(tag: 239, GET)
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 239, GET) unregistering (last)
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 3123, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,105+0000 INFO ReadBuffer RB-LR-Handler(tag: 239, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 3122, GET) unregistering (last)
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 3123, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 3123, GET) -> 240
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 240, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 240, GET) reader: LR-Handler(tag: 240, GET)
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 240, GET) sending length: 6078, 168584795
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 3124, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 3123, GET) sending length: 6078, 873719172
+2013-08-27 01:14:03,105+0000 INFO ReadBuffer RB-LR-Handler(tag: 240, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:03,105+0000 INFO ReadBuffer RB-LR-Handler(tag: 240, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 3124, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,105+0000 INFO LocalIOProvider LR-Handler(tag: 240, GET) rbuf: RB-LR-Handler(tag: 240, GET)
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 240, GET) unregistering (last)
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 3124, GET) -> 241
+2013-08-27 01:14:03,105+0000 INFO ReadBuffer RB-LR-Handler(tag: 240, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 3123, GET) unregistering (last)
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 241, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 241, GET) reader: LR-Handler(tag: 241, GET)
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 241, GET) sending length: 6078, 1160688957
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 3124, GET) sending length: 6078, 2105334598
+2013-08-27 01:14:03,105+0000 INFO ReadBuffer RB-LR-Handler(tag: 241, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:03,105+0000 INFO ReadBuffer RB-LR-Handler(tag: 241, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 3125, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,105+0000 INFO LocalIOProvider LR-Handler(tag: 241, GET) rbuf: RB-LR-Handler(tag: 241, GET)
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 241, GET) unregistering (last)
+2013-08-27 01:14:03,105+0000 INFO ReadBuffer RB-LR-Handler(tag: 241, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 3124, GET) unregistering (last)
+2013-08-27 01:14:03,105+0000 INFO GetFileHandler Handler(tag: 3125, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,106+0000 INFO GetFileHandler Handler(tag: 3125, GET) -> 242
+2013-08-27 01:14:03,106+0000 INFO GetFileHandler Handler(tag: 242, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,106+0000 INFO GetFileHandler Handler(tag: 242, GET) reader: LR-Handler(tag: 242, GET)
+2013-08-27 01:14:03,106+0000 INFO GetFileHandler Handler(tag: 242, GET) sending length: 6078, 1298625981
+2013-08-27 01:14:03,106+0000 INFO GetFileHandler Handler(tag: 3125, GET) sending length: 6078, 1130558206
+2013-08-27 01:14:03,106+0000 INFO ReadBuffer RB-LR-Handler(tag: 242, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:03,106+0000 INFO ReadBuffer RB-LR-Handler(tag: 242, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,106+0000 INFO LocalIOProvider LR-Handler(tag: 242, GET) rbuf: RB-LR-Handler(tag: 242, GET)
+2013-08-27 01:14:03,106+0000 INFO GetFileHandler Handler(tag: 242, GET) unregistering (last)
+2013-08-27 01:14:03,106+0000 INFO ReadBuffer RB-LR-Handler(tag: 242, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,106+0000 INFO GetFileHandler Handler(tag: 3125, GET) unregistering (last)
+2013-08-27 01:14:03,106+0000 DEBUG Cpu Active workerid=0827-1301520-000000:000000
+2013-08-27 01:14:03,106+0000 INFO RequestHandler Handler(tag: 3126, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,106+0000 INFO RequestHandler Handler(tag: 243, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,107+0000 INFO GetFileHandler Handler(tag: 3127, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,107+0000 INFO GetFileHandler Handler(tag: 3127, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,107+0000 INFO GetFileHandler Handler(tag: 3127, GET) -> 244
+2013-08-27 01:14:03,107+0000 INFO GetFileHandler Handler(tag: 244, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,107+0000 INFO GetFileHandler Handler(tag: 244, GET) reader: LR-Handler(tag: 244, GET)
+2013-08-27 01:14:03,107+0000 INFO GetFileHandler Handler(tag: 244, GET) sending length: 6078, 1894736744
+2013-08-27 01:14:03,107+0000 INFO GetFileHandler Handler(tag: 3127, GET) sending length: 6078, 1952938692
+2013-08-27 01:14:03,107+0000 INFO ReadBuffer RB-LR-Handler(tag: 244, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:03,107+0000 INFO ReadBuffer RB-LR-Handler(tag: 244, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,107+0000 INFO LocalIOProvider LR-Handler(tag: 244, GET) rbuf: RB-LR-Handler(tag: 244, GET)
+2013-08-27 01:14:03,107+0000 INFO GetFileHandler Handler(tag: 244, GET) unregistering (last)
+2013-08-27 01:14:03,107+0000 INFO ReadBuffer RB-LR-Handler(tag: 244, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,107+0000 INFO GetFileHandler Handler(tag: 3127, GET) unregistering (last)
+2013-08-27 01:14:03,107+0000 DEBUG Cpu Active workerid=0827-1301520-000000:000000
+2013-08-27 01:14:03,107+0000 INFO RequestHandler Handler(tag: 3128, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,108+0000 INFO RequestHandler Handler(tag: 245, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 3129, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 3129, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 3129, GET) -> 246
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 246, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 246, GET) reader: LR-Handler(tag: 246, GET)
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 246, GET) sending length: 6078, 2037886922
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 3130, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 3129, GET) sending length: 6078, 548812051
+2013-08-27 01:14:03,108+0000 INFO ReadBuffer RB-LR-Handler(tag: 246, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:03,108+0000 INFO ReadBuffer RB-LR-Handler(tag: 246, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 3130, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,108+0000 INFO LocalIOProvider LR-Handler(tag: 246, GET) rbuf: RB-LR-Handler(tag: 246, GET)
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 246, GET) unregistering (last)
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 3130, GET) -> 247
+2013-08-27 01:14:03,108+0000 INFO ReadBuffer RB-LR-Handler(tag: 246, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 3129, GET) unregistering (last)
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 247, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 247, GET) reader: LR-Handler(tag: 247, GET)
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 247, GET) sending length: 6078, 579340670
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 3130, GET) sending length: 6078, 287785192
+2013-08-27 01:14:03,108+0000 INFO ReadBuffer RB-LR-Handler(tag: 247, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:03,108+0000 INFO ReadBuffer RB-LR-Handler(tag: 247, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,108+0000 INFO LocalIOProvider LR-Handler(tag: 247, GET) rbuf: RB-LR-Handler(tag: 247, GET)
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 3131, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 247, GET) unregistering (last)
+2013-08-27 01:14:03,108+0000 INFO ReadBuffer RB-LR-Handler(tag: 247, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 3130, GET) unregistering (last)
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 3131, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 3131, GET) -> 248
+2013-08-27 01:14:03,108+0000 INFO GetFileHandler Handler(tag: 248, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 248, GET) reader: LR-Handler(tag: 248, GET)
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 248, GET) sending length: 6078, 1524650473
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 3132, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 3131, GET) sending length: 6078, 1025623707
+2013-08-27 01:14:03,109+0000 INFO ReadBuffer RB-LR-Handler(tag: 248, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:03,109+0000 INFO ReadBuffer RB-LR-Handler(tag: 248, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 3132, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,109+0000 INFO LocalIOProvider LR-Handler(tag: 248, GET) rbuf: RB-LR-Handler(tag: 248, GET)
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 248, GET) unregistering (last)
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 3132, GET) -> 249
+2013-08-27 01:14:03,109+0000 INFO ReadBuffer RB-LR-Handler(tag: 248, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 3131, GET) unregistering (last)
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 249, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 249, GET) reader: LR-Handler(tag: 249, GET)
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 249, GET) sending length: 6078, 6051787
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 3132, GET) sending length: 6078, 780652700
+2013-08-27 01:14:03,109+0000 INFO ReadBuffer RB-LR-Handler(tag: 249, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:03,109+0000 INFO ReadBuffer RB-LR-Handler(tag: 249, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,109+0000 INFO LocalIOProvider LR-Handler(tag: 249, GET) rbuf: RB-LR-Handler(tag: 249, GET)
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 249, GET) unregistering (last)
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 3133, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,109+0000 INFO ReadBuffer RB-LR-Handler(tag: 249, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 3132, GET) unregistering (last)
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 3133, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 3133, GET) -> 250
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 250, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 250, GET) reader: LR-Handler(tag: 250, GET)
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 250, GET) sending length: 6078, 767405246
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 3133, GET) sending length: 6078, 2140669287
+2013-08-27 01:14:03,109+0000 INFO ReadBuffer RB-LR-Handler(tag: 250, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:03,109+0000 INFO ReadBuffer RB-LR-Handler(tag: 250, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,109+0000 INFO LocalIOProvider LR-Handler(tag: 250, GET) rbuf: RB-LR-Handler(tag: 250, GET)
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 250, GET) unregistering (last)
+2013-08-27 01:14:03,109+0000 INFO ReadBuffer RB-LR-Handler(tag: 250, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,109+0000 INFO GetFileHandler Handler(tag: 3133, GET) unregistering (last)
+2013-08-27 01:14:03,110+0000 DEBUG Cpu Active workerid=0827-1301520-000000:000000
+2013-08-27 01:14:03,110+0000 INFO RequestHandler Handler(tag: 3134, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,110+0000 INFO RequestHandler Handler(tag: 251, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,111+0000 DEBUG Cpu Active workerid=0827-1301520-000000:000000
+2013-08-27 01:14:03,111+0000 INFO RequestHandler Handler(tag: 3135, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,111+0000 INFO RequestHandler Handler(tag: 252, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,111+0000 DEBUG Cpu Active workerid=0827-1301520-000000:000000
+2013-08-27 01:14:03,111+0000 INFO RequestHandler Handler(tag: 3136, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,111+0000 INFO RequestHandler Handler(tag: 253, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,112+0000 DEBUG Cpu Active workerid=0827-1301520-000000:000000
+2013-08-27 01:14:03,112+0000 INFO RequestHandler Handler(tag: 3137, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,112+0000 INFO RequestHandler Handler(tag: 254, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,113+0000 DEBUG Cpu Active workerid=0827-1301520-000000:000000
+2013-08-27 01:14:03,113+0000 INFO RequestHandler Handler(tag: 3138, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,113+0000 INFO RequestHandler Handler(tag: 255, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,114+0000 DEBUG Cpu Active workerid=0827-1301520-000000:000000
+2013-08-27 01:14:03,114+0000 INFO RequestHandler Handler(tag: 3139, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,114+0000 INFO RequestHandler Handler(tag: 256, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,115+0000 DEBUG Cpu Active workerid=0827-1301520-000000:000000
+2013-08-27 01:14:03,115+0000 INFO RequestHandler Handler(tag: 3140, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,115+0000 INFO RequestHandler Handler(tag: 257, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,116+0000 DEBUG Cpu Active workerid=0827-1301520-000000:000000
+2013-08-27 01:14:03,116+0000 INFO RequestHandler Handler(tag: 3141, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,116+0000 INFO RequestHandler Handler(tag: 258, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,116+0000 DEBUG Cpu Active workerid=0827-1301520-000000:000000
+2013-08-27 01:14:03,116+0000 INFO RequestHandler Handler(tag: 3142, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,116+0000 INFO RequestHandler Handler(tag: 259, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,117+0000 DEBUG Cpu Active workerid=0827-1301520-000000:000000
+2013-08-27 01:14:03,117+0000 INFO RequestHandler Handler(tag: 3143, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,117+0000 INFO RequestHandler Handler(tag: 260, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,118+0000 DEBUG Cpu Active workerid=0827-1301520-000000:000000
+2013-08-27 01:14:03,118+0000 INFO RequestHandler Handler(tag: 3144, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,118+0000 INFO RequestHandler Handler(tag: 261, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,119+0000 DEBUG Cpu Active workerid=0827-1301520-000000:000000
+2013-08-27 01:14:03,119+0000 INFO RequestHandler Handler(tag: 3145, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,119+0000 INFO RequestHandler Handler(tag: 262, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,120+0000 DEBUG Cpu Active workerid=0827-1301520-000000:000000
+2013-08-27 01:14:03,120+0000 INFO RequestHandler Handler(tag: 3146, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,120+0000 INFO RequestHandler Handler(tag: 263, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,294+0000 INFO GetFileHandler Handler(tag: 2586, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,295+0000 INFO GetFileHandler Handler(tag: 2586, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,295+0000 INFO GetFileHandler Handler(tag: 2586, GET) -> 264
+2013-08-27 01:14:03,295+0000 INFO GetFileHandler Handler(tag: 264, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,295+0000 INFO GetFileHandler Handler(tag: 264, GET) reader: LR-Handler(tag: 264, GET)
+2013-08-27 01:14:03,295+0000 INFO GetFileHandler Handler(tag: 264, GET) sending length: 148937, 1691809533
+2013-08-27 01:14:03,295+0000 INFO ReadBuffer RB-LR-Handler(tag: 264, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,295+0000 INFO GetFileHandler Handler(tag: 2586, GET) sending length: 148937, 1997896416
+2013-08-27 01:14:03,295+0000 INFO ReadBuffer RB-LR-Handler(tag: 264, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,295+0000 INFO LocalIOProvider LR-Handler(tag: 264, GET) rbuf: RB-LR-Handler(tag: 264, GET)
+2013-08-27 01:14:03,295+0000 INFO GetFileHandler Handler(tag: 264, GET) unregistering (last)
+2013-08-27 01:14:03,295+0000 INFO GetFileHandler Handler(tag: 2586, GET) unregistering (last)
+2013-08-27 01:14:03,295+0000 INFO ReadBuffer RB-LR-Handler(tag: 264, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,295+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,295+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,295+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,295+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,341+0000 INFO GetFileHandler Handler(tag: 2587, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,341+0000 INFO GetFileHandler Handler(tag: 2587, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,341+0000 INFO GetFileHandler Handler(tag: 2587, GET) -> 265
+2013-08-27 01:14:03,341+0000 INFO GetFileHandler Handler(tag: 265, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,341+0000 INFO GetFileHandler Handler(tag: 265, GET) reader: LR-Handler(tag: 265, GET)
+2013-08-27 01:14:03,341+0000 INFO GetFileHandler Handler(tag: 265, GET) sending length: 148937, 1073310459
+2013-08-27 01:14:03,341+0000 INFO GetFileHandler Handler(tag: 2587, GET) sending length: 148937, 266249613
+2013-08-27 01:14:03,341+0000 INFO ReadBuffer RB-LR-Handler(tag: 265, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,341+0000 INFO ReadBuffer RB-LR-Handler(tag: 265, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,341+0000 INFO LocalIOProvider LR-Handler(tag: 265, GET) rbuf: RB-LR-Handler(tag: 265, GET)
+2013-08-27 01:14:03,341+0000 INFO GetFileHandler Handler(tag: 265, GET) unregistering (last)
+2013-08-27 01:14:03,341+0000 INFO ReadBuffer RB-LR-Handler(tag: 265, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,341+0000 INFO GetFileHandler Handler(tag: 2587, GET) unregistering (last)
+2013-08-27 01:14:03,341+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,341+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,341+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,380+0000 INFO GetFileHandler Handler(tag: 2588, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,380+0000 INFO GetFileHandler Handler(tag: 2588, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,380+0000 INFO GetFileHandler Handler(tag: 2588, GET) -> 266
+2013-08-27 01:14:03,381+0000 INFO GetFileHandler Handler(tag: 266, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,381+0000 INFO GetFileHandler Handler(tag: 266, GET) reader: LR-Handler(tag: 266, GET)
+2013-08-27 01:14:03,381+0000 INFO GetFileHandler Handler(tag: 266, GET) sending length: 148937, 1321063021
+2013-08-27 01:14:03,381+0000 INFO GetFileHandler Handler(tag: 2588, GET) sending length: 148937, 272767614
+2013-08-27 01:14:03,381+0000 INFO ReadBuffer RB-LR-Handler(tag: 266, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,381+0000 INFO ReadBuffer RB-LR-Handler(tag: 266, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,381+0000 INFO LocalIOProvider LR-Handler(tag: 266, GET) rbuf: RB-LR-Handler(tag: 266, GET)
+2013-08-27 01:14:03,381+0000 INFO ThrottleManager I maxBuffers=1024, crtBuffers=5, allowedTransfers=252, active=0, suspended=0
+2013-08-27 01:14:03,381+0000 INFO ThrottleManager O maxBuffers=1024, crtBuffers=1, allowedTransfers=255, active=0, suspended=0
+2013-08-27 01:14:03,381+0000 INFO GetFileHandler Handler(tag: 266, GET) unregistering (last)
+2013-08-27 01:14:03,381+0000 INFO ReadBuffer RB-LR-Handler(tag: 266, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,381+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,381+0000 INFO ThrottleManager mem=223.81 MB, heap=399.94 MB, maxHeap=910.25 MB
+2013-08-27 01:14:03,381+0000 INFO GetFileHandler Handler(tag: 2588, GET) unregistering (last)
+2013-08-27 01:14:03,399+0000 INFO GetFileHandler Handler(tag: 2589, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,399+0000 INFO GetFileHandler Handler(tag: 2589, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,399+0000 INFO GetFileHandler Handler(tag: 2589, GET) -> 267
+2013-08-27 01:14:03,400+0000 INFO GetFileHandler Handler(tag: 267, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,400+0000 INFO GetFileHandler Handler(tag: 267, GET) reader: LR-Handler(tag: 267, GET)
+2013-08-27 01:14:03,400+0000 INFO GetFileHandler Handler(tag: 267, GET) sending length: 148937, 357102764
+2013-08-27 01:14:03,400+0000 INFO GetFileHandler Handler(tag: 2589, GET) sending length: 148937, 1756844830
+2013-08-27 01:14:03,400+0000 INFO ReadBuffer RB-LR-Handler(tag: 267, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,400+0000 INFO ReadBuffer RB-LR-Handler(tag: 267, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,400+0000 INFO LocalIOProvider LR-Handler(tag: 267, GET) rbuf: RB-LR-Handler(tag: 267, GET)
+2013-08-27 01:14:03,400+0000 INFO GetFileHandler Handler(tag: 267, GET) unregistering (last)
+2013-08-27 01:14:03,400+0000 INFO GetFileHandler Handler(tag: 2589, GET) unregistering (last)
+2013-08-27 01:14:03,400+0000 INFO ReadBuffer RB-LR-Handler(tag: 267, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,400+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,400+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,400+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,414+0000 INFO GetFileHandler Handler(tag: 2590, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,414+0000 INFO GetFileHandler Handler(tag: 2590, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,414+0000 INFO GetFileHandler Handler(tag: 2590, GET) -> 268
+2013-08-27 01:14:03,414+0000 INFO GetFileHandler Handler(tag: 268, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,414+0000 INFO GetFileHandler Handler(tag: 268, GET) reader: LR-Handler(tag: 268, GET)
+2013-08-27 01:14:03,414+0000 INFO GetFileHandler Handler(tag: 268, GET) sending length: 148937, 1376434098
+2013-08-27 01:14:03,414+0000 INFO GetFileHandler Handler(tag: 2590, GET) sending length: 148937, 1034039602
+2013-08-27 01:14:03,414+0000 INFO ReadBuffer RB-LR-Handler(tag: 268, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,414+0000 INFO ReadBuffer RB-LR-Handler(tag: 268, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,414+0000 INFO LocalIOProvider LR-Handler(tag: 268, GET) rbuf: RB-LR-Handler(tag: 268, GET)
+2013-08-27 01:14:03,415+0000 INFO GetFileHandler Handler(tag: 268, GET) unregistering (last)
+2013-08-27 01:14:03,415+0000 INFO GetFileHandler Handler(tag: 2590, GET) unregistering (last)
+2013-08-27 01:14:03,415+0000 INFO ReadBuffer RB-LR-Handler(tag: 268, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,415+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,415+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,415+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,422+0000 INFO GetFileHandler Handler(tag: 2591, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,422+0000 INFO GetFileHandler Handler(tag: 2591, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,422+0000 INFO GetFileHandler Handler(tag: 2591, GET) -> 269
+2013-08-27 01:14:03,422+0000 INFO GetFileHandler Handler(tag: 269, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,422+0000 INFO GetFileHandler Handler(tag: 269, GET) reader: LR-Handler(tag: 269, GET)
+2013-08-27 01:14:03,422+0000 INFO GetFileHandler Handler(tag: 269, GET) sending length: 148937, 284152826
+2013-08-27 01:14:03,422+0000 INFO GetFileHandler Handler(tag: 2591, GET) sending length: 148937, 1900399301
+2013-08-27 01:14:03,422+0000 INFO ReadBuffer RB-LR-Handler(tag: 269, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,422+0000 INFO ReadBuffer RB-LR-Handler(tag: 269, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,422+0000 INFO LocalIOProvider LR-Handler(tag: 269, GET) rbuf: RB-LR-Handler(tag: 269, GET)
+2013-08-27 01:14:03,422+0000 INFO GetFileHandler Handler(tag: 269, GET) unregistering (last)
+2013-08-27 01:14:03,422+0000 INFO GetFileHandler Handler(tag: 2591, GET) unregistering (last)
+2013-08-27 01:14:03,422+0000 INFO ReadBuffer RB-LR-Handler(tag: 269, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,422+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,422+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,422+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,428+0000 INFO GetFileHandler Handler(tag: 2592, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,428+0000 INFO GetFileHandler Handler(tag: 2592, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,428+0000 INFO GetFileHandler Handler(tag: 2592, GET) -> 270
+2013-08-27 01:14:03,428+0000 INFO GetFileHandler Handler(tag: 270, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,428+0000 INFO GetFileHandler Handler(tag: 270, GET) reader: LR-Handler(tag: 270, GET)
+2013-08-27 01:14:03,428+0000 INFO GetFileHandler Handler(tag: 270, GET) sending length: 148937, 1232199135
+2013-08-27 01:14:03,428+0000 INFO GetFileHandler Handler(tag: 2592, GET) sending length: 148937, 1386053924
+2013-08-27 01:14:03,428+0000 INFO ReadBuffer RB-LR-Handler(tag: 270, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,428+0000 INFO ReadBuffer RB-LR-Handler(tag: 270, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,428+0000 INFO LocalIOProvider LR-Handler(tag: 270, GET) rbuf: RB-LR-Handler(tag: 270, GET)
+2013-08-27 01:14:03,428+0000 INFO GetFileHandler Handler(tag: 270, GET) unregistering (last)
+2013-08-27 01:14:03,428+0000 INFO ReadBuffer RB-LR-Handler(tag: 270, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,428+0000 INFO GetFileHandler Handler(tag: 2592, GET) unregistering (last)
+2013-08-27 01:14:03,428+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,428+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,428+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,428+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,435+0000 INFO GetFileHandler Handler(tag: 2593, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,435+0000 INFO GetFileHandler Handler(tag: 2593, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,436+0000 INFO GetFileHandler Handler(tag: 2593, GET) -> 271
+2013-08-27 01:14:03,436+0000 INFO GetFileHandler Handler(tag: 271, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,436+0000 INFO GetFileHandler Handler(tag: 271, GET) reader: LR-Handler(tag: 271, GET)
+2013-08-27 01:14:03,436+0000 INFO GetFileHandler Handler(tag: 271, GET) sending length: 148937, 2134119327
+2013-08-27 01:14:03,436+0000 INFO GetFileHandler Handler(tag: 2593, GET) sending length: 148937, 871656695
+2013-08-27 01:14:03,436+0000 INFO ReadBuffer RB-LR-Handler(tag: 271, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,436+0000 INFO ReadBuffer RB-LR-Handler(tag: 271, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,436+0000 INFO LocalIOProvider LR-Handler(tag: 271, GET) rbuf: RB-LR-Handler(tag: 271, GET)
+2013-08-27 01:14:03,436+0000 INFO GetFileHandler Handler(tag: 271, GET) unregistering (last)
+2013-08-27 01:14:03,436+0000 INFO GetFileHandler Handler(tag: 2593, GET) unregistering (last)
+2013-08-27 01:14:03,436+0000 INFO ReadBuffer RB-LR-Handler(tag: 271, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,436+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,436+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,436+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,436+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,439+0000 INFO GetFileHandler Handler(tag: 2594, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,439+0000 INFO GetFileHandler Handler(tag: 2594, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,439+0000 INFO GetFileHandler Handler(tag: 2594, GET) -> 272
+2013-08-27 01:14:03,439+0000 INFO GetFileHandler Handler(tag: 272, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,439+0000 INFO GetFileHandler Handler(tag: 272, GET) reader: LR-Handler(tag: 272, GET)
+2013-08-27 01:14:03,439+0000 INFO GetFileHandler Handler(tag: 272, GET) sending length: 148937, 788065887
+2013-08-27 01:14:03,439+0000 INFO GetFileHandler Handler(tag: 2594, GET) sending length: 148937, 1491711760
+2013-08-27 01:14:03,439+0000 INFO ReadBuffer RB-LR-Handler(tag: 272, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,439+0000 INFO ReadBuffer RB-LR-Handler(tag: 272, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,439+0000 INFO LocalIOProvider LR-Handler(tag: 272, GET) rbuf: RB-LR-Handler(tag: 272, GET)
+2013-08-27 01:14:03,439+0000 INFO GetFileHandler Handler(tag: 272, GET) unregistering (last)
+2013-08-27 01:14:03,439+0000 INFO GetFileHandler Handler(tag: 2594, GET) unregistering (last)
+2013-08-27 01:14:03,439+0000 INFO ReadBuffer RB-LR-Handler(tag: 272, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,439+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,439+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,439+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,439+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,440+0000 INFO GetFileHandler Handler(tag: 2595, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,440+0000 INFO GetFileHandler Handler(tag: 2595, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,440+0000 INFO GetFileHandler Handler(tag: 2595, GET) -> 273
+2013-08-27 01:14:03,440+0000 INFO GetFileHandler Handler(tag: 273, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,440+0000 INFO GetFileHandler Handler(tag: 273, GET) reader: LR-Handler(tag: 273, GET)
+2013-08-27 01:14:03,440+0000 INFO GetFileHandler Handler(tag: 273, GET) sending length: 148937, 838473809
+2013-08-27 01:14:03,440+0000 INFO GetFileHandler Handler(tag: 2595, GET) sending length: 148937, 441616249
+2013-08-27 01:14:03,440+0000 INFO ReadBuffer RB-LR-Handler(tag: 273, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,440+0000 INFO ReadBuffer RB-LR-Handler(tag: 273, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,440+0000 INFO LocalIOProvider LR-Handler(tag: 273, GET) rbuf: RB-LR-Handler(tag: 273, GET)
+2013-08-27 01:14:03,440+0000 INFO GetFileHandler Handler(tag: 273, GET) unregistering (last)
+2013-08-27 01:14:03,440+0000 INFO GetFileHandler Handler(tag: 2595, GET) unregistering (last)
+2013-08-27 01:14:03,440+0000 INFO ReadBuffer RB-LR-Handler(tag: 273, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,440+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,440+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,440+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,440+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,441+0000 INFO GetFileHandler Handler(tag: 2596, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,441+0000 INFO GetFileHandler Handler(tag: 2596, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,441+0000 INFO GetFileHandler Handler(tag: 2596, GET) -> 274
+2013-08-27 01:14:03,441+0000 INFO GetFileHandler Handler(tag: 274, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,441+0000 INFO GetFileHandler Handler(tag: 274, GET) reader: LR-Handler(tag: 274, GET)
+2013-08-27 01:14:03,441+0000 INFO GetFileHandler Handler(tag: 274, GET) sending length: 148937, 2096061374
+2013-08-27 01:14:03,441+0000 INFO GetFileHandler Handler(tag: 2596, GET) sending length: 148937, 1181767430
+2013-08-27 01:14:03,441+0000 INFO ReadBuffer RB-LR-Handler(tag: 274, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,441+0000 INFO ReadBuffer RB-LR-Handler(tag: 274, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,441+0000 INFO LocalIOProvider LR-Handler(tag: 274, GET) rbuf: RB-LR-Handler(tag: 274, GET)
+2013-08-27 01:14:03,441+0000 INFO GetFileHandler Handler(tag: 274, GET) unregistering (last)
+2013-08-27 01:14:03,441+0000 INFO GetFileHandler Handler(tag: 2596, GET) unregistering (last)
+2013-08-27 01:14:03,441+0000 INFO ReadBuffer RB-LR-Handler(tag: 274, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,441+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,441+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,441+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,442+0000 INFO GetFileHandler Handler(tag: 2597, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,442+0000 INFO GetFileHandler Handler(tag: 2597, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,442+0000 INFO GetFileHandler Handler(tag: 2597, GET) -> 275
+2013-08-27 01:14:03,442+0000 INFO GetFileHandler Handler(tag: 275, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,442+0000 INFO GetFileHandler Handler(tag: 275, GET) reader: LR-Handler(tag: 275, GET)
+2013-08-27 01:14:03,442+0000 INFO GetFileHandler Handler(tag: 275, GET) sending length: 148937, 2028897604
+2013-08-27 01:14:03,442+0000 INFO GetFileHandler Handler(tag: 2597, GET) sending length: 148937, 1936683362
+2013-08-27 01:14:03,442+0000 INFO ReadBuffer RB-LR-Handler(tag: 275, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,442+0000 INFO ReadBuffer RB-LR-Handler(tag: 275, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,442+0000 INFO LocalIOProvider LR-Handler(tag: 275, GET) rbuf: RB-LR-Handler(tag: 275, GET)
+2013-08-27 01:14:03,442+0000 INFO GetFileHandler Handler(tag: 275, GET) unregistering (last)
+2013-08-27 01:14:03,442+0000 INFO GetFileHandler Handler(tag: 2597, GET) unregistering (last)
+2013-08-27 01:14:03,442+0000 INFO ReadBuffer RB-LR-Handler(tag: 275, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,443+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,443+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,443+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,443+0000 INFO GetFileHandler Handler(tag: 2598, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,443+0000 INFO GetFileHandler Handler(tag: 2598, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,443+0000 INFO GetFileHandler Handler(tag: 2598, GET) -> 276
+2013-08-27 01:14:03,443+0000 INFO GetFileHandler Handler(tag: 276, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,443+0000 INFO GetFileHandler Handler(tag: 276, GET) reader: LR-Handler(tag: 276, GET)
+2013-08-27 01:14:03,443+0000 INFO GetFileHandler Handler(tag: 276, GET) sending length: 148937, 1105636392
+2013-08-27 01:14:03,443+0000 INFO GetFileHandler Handler(tag: 2598, GET) sending length: 148937, 254842853
+2013-08-27 01:14:03,443+0000 INFO ReadBuffer RB-LR-Handler(tag: 276, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,443+0000 INFO ReadBuffer RB-LR-Handler(tag: 276, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,443+0000 INFO LocalIOProvider LR-Handler(tag: 276, GET) rbuf: RB-LR-Handler(tag: 276, GET)
+2013-08-27 01:14:03,443+0000 INFO GetFileHandler Handler(tag: 276, GET) unregistering (last)
+2013-08-27 01:14:03,443+0000 INFO GetFileHandler Handler(tag: 2598, GET) unregistering (last)
+2013-08-27 01:14:03,443+0000 INFO ReadBuffer RB-LR-Handler(tag: 276, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,443+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,443+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,443+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,444+0000 INFO GetFileHandler Handler(tag: 2599, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,444+0000 INFO GetFileHandler Handler(tag: 2599, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,444+0000 INFO GetFileHandler Handler(tag: 2599, GET) -> 277
+2013-08-27 01:14:03,444+0000 INFO GetFileHandler Handler(tag: 277, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,444+0000 INFO GetFileHandler Handler(tag: 277, GET) reader: LR-Handler(tag: 277, GET)
+2013-08-27 01:14:03,444+0000 INFO GetFileHandler Handler(tag: 277, GET) sending length: 148937, 1647217756
+2013-08-27 01:14:03,444+0000 INFO GetFileHandler Handler(tag: 2599, GET) sending length: 148937, 1577131615
+2013-08-27 01:14:03,444+0000 INFO ReadBuffer RB-LR-Handler(tag: 277, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,444+0000 INFO ReadBuffer RB-LR-Handler(tag: 277, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,444+0000 INFO LocalIOProvider LR-Handler(tag: 277, GET) rbuf: RB-LR-Handler(tag: 277, GET)
+2013-08-27 01:14:03,445+0000 INFO GetFileHandler Handler(tag: 277, GET) unregistering (last)
+2013-08-27 01:14:03,445+0000 INFO GetFileHandler Handler(tag: 2599, GET) unregistering (last)
+2013-08-27 01:14:03,445+0000 INFO ReadBuffer RB-LR-Handler(tag: 277, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,445+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,445+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,445+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,445+0000 INFO GetFileHandler Handler(tag: 2600, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,445+0000 INFO GetFileHandler Handler(tag: 2600, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,445+0000 INFO GetFileHandler Handler(tag: 2600, GET) -> 278
+2013-08-27 01:14:03,445+0000 INFO GetFileHandler Handler(tag: 278, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,445+0000 INFO GetFileHandler Handler(tag: 278, GET) reader: LR-Handler(tag: 278, GET)
+2013-08-27 01:14:03,445+0000 INFO GetFileHandler Handler(tag: 278, GET) sending length: 148937, 1200320659
+2013-08-27 01:14:03,445+0000 INFO GetFileHandler Handler(tag: 2600, GET) sending length: 148937, 327935895
+2013-08-27 01:14:03,445+0000 INFO ReadBuffer RB-LR-Handler(tag: 278, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,445+0000 INFO ReadBuffer RB-LR-Handler(tag: 278, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,445+0000 INFO LocalIOProvider LR-Handler(tag: 278, GET) rbuf: RB-LR-Handler(tag: 278, GET)
+2013-08-27 01:14:03,446+0000 INFO GetFileHandler Handler(tag: 278, GET) unregistering (last)
+2013-08-27 01:14:03,446+0000 INFO GetFileHandler Handler(tag: 2600, GET) unregistering (last)
+2013-08-27 01:14:03,446+0000 INFO ReadBuffer RB-LR-Handler(tag: 278, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,446+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,446+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,446+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,446+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,446+0000 INFO GetFileHandler Handler(tag: 2601, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,446+0000 INFO GetFileHandler Handler(tag: 2601, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,446+0000 INFO GetFileHandler Handler(tag: 2601, GET) -> 279
+2013-08-27 01:14:03,446+0000 INFO GetFileHandler Handler(tag: 279, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,446+0000 INFO GetFileHandler Handler(tag: 279, GET) reader: LR-Handler(tag: 279, GET)
+2013-08-27 01:14:03,446+0000 INFO GetFileHandler Handler(tag: 279, GET) sending length: 148937, 1776907850
+2013-08-27 01:14:03,446+0000 INFO GetFileHandler Handler(tag: 2601, GET) sending length: 148937, 1582639768
+2013-08-27 01:14:03,446+0000 INFO ReadBuffer RB-LR-Handler(tag: 279, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:03,446+0000 INFO ReadBuffer RB-LR-Handler(tag: 279, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:03,446+0000 INFO LocalIOProvider LR-Handler(tag: 279, GET) rbuf: RB-LR-Handler(tag: 279, GET)
+2013-08-27 01:14:03,447+0000 INFO GetFileHandler Handler(tag: 279, GET) unregistering (last)
+2013-08-27 01:14:03,447+0000 INFO GetFileHandler Handler(tag: 2601, GET) unregistering (last)
+2013-08-27 01:14:03,447+0000 INFO ReadBuffer RB-LR-Handler(tag: 279, GET) de-allocating 5 buffers
+2013-08-27 01:14:03,447+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,447+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,447+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:03,448+0000 INFO GetFileHandler Handler(tag: 2602, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,448+0000 INFO GetFileHandler Handler(tag: 2602, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,448+0000 INFO GetFileHandler Handler(tag: 2602, GET) -> 280
+2013-08-27 01:14:03,448+0000 INFO GetFileHandler Handler(tag: 280, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,448+0000 INFO GetFileHandler Handler(tag: 280, GET) reader: LR-Handler(tag: 280, GET)
+2013-08-27 01:14:03,448+0000 INFO GetFileHandler Handler(tag: 280, GET) sending length: 543, 34352041
+2013-08-27 01:14:03,448+0000 INFO GetFileHandler Handler(tag: 2602, GET) sending length: 543, 1829135691
+2013-08-27 01:14:03,448+0000 INFO ReadBuffer RB-LR-Handler(tag: 280, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,448+0000 INFO ReadBuffer RB-LR-Handler(tag: 280, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,448+0000 INFO LocalIOProvider LR-Handler(tag: 280, GET) rbuf: RB-LR-Handler(tag: 280, GET)
+2013-08-27 01:14:03,448+0000 INFO GetFileHandler Handler(tag: 280, GET) unregistering (last)
+2013-08-27 01:14:03,448+0000 INFO ReadBuffer RB-LR-Handler(tag: 280, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,448+0000 INFO GetFileHandler Handler(tag: 2602, GET) unregistering (last)
+2013-08-27 01:14:03,449+0000 INFO GetFileHandler Handler(tag: 2603, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,449+0000 INFO GetFileHandler Handler(tag: 2603, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,449+0000 INFO GetFileHandler Handler(tag: 2603, GET) -> 281
+2013-08-27 01:14:03,449+0000 INFO GetFileHandler Handler(tag: 281, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,449+0000 INFO GetFileHandler Handler(tag: 281, GET) reader: LR-Handler(tag: 281, GET)
+2013-08-27 01:14:03,449+0000 INFO GetFileHandler Handler(tag: 281, GET) sending length: 543, 2031668134
+2013-08-27 01:14:03,449+0000 INFO GetFileHandler Handler(tag: 2603, GET) sending length: 543, 1256340838
+2013-08-27 01:14:03,449+0000 INFO ReadBuffer RB-LR-Handler(tag: 281, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,449+0000 INFO ReadBuffer RB-LR-Handler(tag: 281, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,449+0000 INFO LocalIOProvider LR-Handler(tag: 281, GET) rbuf: RB-LR-Handler(tag: 281, GET)
+2013-08-27 01:14:03,449+0000 INFO GetFileHandler Handler(tag: 281, GET) unregistering (last)
+2013-08-27 01:14:03,449+0000 INFO ReadBuffer RB-LR-Handler(tag: 281, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,449+0000 INFO GetFileHandler Handler(tag: 2603, GET) unregistering (last)
+2013-08-27 01:14:03,450+0000 INFO GetFileHandler Handler(tag: 2604, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,450+0000 INFO GetFileHandler Handler(tag: 2604, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,450+0000 INFO GetFileHandler Handler(tag: 2604, GET) -> 282
+2013-08-27 01:14:03,450+0000 INFO GetFileHandler Handler(tag: 282, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,451+0000 INFO GetFileHandler Handler(tag: 282, GET) reader: LR-Handler(tag: 282, GET)
+2013-08-27 01:14:03,451+0000 INFO GetFileHandler Handler(tag: 282, GET) sending length: 543, 1093820001
+2013-08-27 01:14:03,451+0000 INFO GetFileHandler Handler(tag: 2604, GET) sending length: 543, 1372738487
+2013-08-27 01:14:03,451+0000 INFO ReadBuffer RB-LR-Handler(tag: 282, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,451+0000 INFO ReadBuffer RB-LR-Handler(tag: 282, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,451+0000 INFO LocalIOProvider LR-Handler(tag: 282, GET) rbuf: RB-LR-Handler(tag: 282, GET)
+2013-08-27 01:14:03,451+0000 INFO GetFileHandler Handler(tag: 282, GET) unregistering (last)
+2013-08-27 01:14:03,451+0000 INFO ReadBuffer RB-LR-Handler(tag: 282, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,451+0000 INFO GetFileHandler Handler(tag: 2604, GET) unregistering (last)
+2013-08-27 01:14:03,452+0000 INFO GetFileHandler Handler(tag: 2605, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,452+0000 INFO GetFileHandler Handler(tag: 2605, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,452+0000 INFO GetFileHandler Handler(tag: 2605, GET) -> 283
+2013-08-27 01:14:03,452+0000 INFO GetFileHandler Handler(tag: 283, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,452+0000 INFO GetFileHandler Handler(tag: 283, GET) reader: LR-Handler(tag: 283, GET)
+2013-08-27 01:14:03,452+0000 INFO GetFileHandler Handler(tag: 283, GET) sending length: 543, 876927033
+2013-08-27 01:14:03,452+0000 INFO GetFileHandler Handler(tag: 2605, GET) sending length: 543, 332374270
+2013-08-27 01:14:03,452+0000 INFO ReadBuffer RB-LR-Handler(tag: 283, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,452+0000 INFO ReadBuffer RB-LR-Handler(tag: 283, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,452+0000 INFO LocalIOProvider LR-Handler(tag: 283, GET) rbuf: RB-LR-Handler(tag: 283, GET)
+2013-08-27 01:14:03,452+0000 INFO GetFileHandler Handler(tag: 283, GET) unregistering (last)
+2013-08-27 01:14:03,452+0000 INFO ReadBuffer RB-LR-Handler(tag: 283, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,452+0000 INFO GetFileHandler Handler(tag: 2605, GET) unregistering (last)
+2013-08-27 01:14:03,453+0000 INFO GetFileHandler Handler(tag: 2606, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,453+0000 INFO GetFileHandler Handler(tag: 2606, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,453+0000 INFO GetFileHandler Handler(tag: 2606, GET) -> 284
+2013-08-27 01:14:03,453+0000 INFO GetFileHandler Handler(tag: 284, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,453+0000 INFO GetFileHandler Handler(tag: 284, GET) reader: LR-Handler(tag: 284, GET)
+2013-08-27 01:14:03,453+0000 INFO GetFileHandler Handler(tag: 284, GET) sending length: 543, 1320243813
+2013-08-27 01:14:03,453+0000 INFO GetFileHandler Handler(tag: 2606, GET) sending length: 543, 1536724287
+2013-08-27 01:14:03,453+0000 INFO ReadBuffer RB-LR-Handler(tag: 284, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,453+0000 INFO ReadBuffer RB-LR-Handler(tag: 284, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,453+0000 INFO LocalIOProvider LR-Handler(tag: 284, GET) rbuf: RB-LR-Handler(tag: 284, GET)
+2013-08-27 01:14:03,453+0000 INFO GetFileHandler Handler(tag: 284, GET) unregistering (last)
+2013-08-27 01:14:03,453+0000 INFO ReadBuffer RB-LR-Handler(tag: 284, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,453+0000 INFO GetFileHandler Handler(tag: 2606, GET) unregistering (last)
+2013-08-27 01:14:03,455+0000 INFO GetFileHandler Handler(tag: 2607, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,455+0000 INFO GetFileHandler Handler(tag: 2607, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,455+0000 INFO GetFileHandler Handler(tag: 2607, GET) -> 285
+2013-08-27 01:14:03,455+0000 INFO GetFileHandler Handler(tag: 285, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,455+0000 INFO GetFileHandler Handler(tag: 285, GET) reader: LR-Handler(tag: 285, GET)
+2013-08-27 01:14:03,455+0000 INFO GetFileHandler Handler(tag: 285, GET) sending length: 543, 105603519
+2013-08-27 01:14:03,455+0000 INFO ReadBuffer RB-LR-Handler(tag: 285, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,455+0000 INFO ReadBuffer RB-LR-Handler(tag: 285, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,455+0000 INFO GetFileHandler Handler(tag: 2607, GET) sending length: 543, 664420340
+2013-08-27 01:14:03,455+0000 INFO LocalIOProvider LR-Handler(tag: 285, GET) rbuf: RB-LR-Handler(tag: 285, GET)
+2013-08-27 01:14:03,461+0000 INFO GetFileHandler Handler(tag: 285, GET) unregistering (last)
+2013-08-27 01:14:03,461+0000 INFO GetFileHandler Handler(tag: 2608, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,461+0000 INFO ReadBuffer RB-LR-Handler(tag: 285, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,461+0000 INFO GetFileHandler Handler(tag: 2607, GET) unregistering (last)
+2013-08-27 01:14:03,462+0000 INFO GetFileHandler Handler(tag: 2608, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,462+0000 INFO GetFileHandler Handler(tag: 2608, GET) -> 286
+2013-08-27 01:14:03,462+0000 INFO GetFileHandler Handler(tag: 286, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,463+0000 INFO GetFileHandler Handler(tag: 2609, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,463+0000 INFO GetFileHandler Handler(tag: 2609, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,463+0000 INFO GetFileHandler Handler(tag: 286, GET) reader: LR-Handler(tag: 286, GET)
+2013-08-27 01:14:03,463+0000 INFO GetFileHandler Handler(tag: 2609, GET) -> 287
+2013-08-27 01:14:03,463+0000 INFO GetFileHandler Handler(tag: 286, GET) sending length: 543, 1665051819
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 2608, GET) sending length: 543, 1722468755
+2013-08-27 01:14:03,464+0000 INFO ReadBuffer RB-LR-Handler(tag: 286, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,464+0000 INFO ReadBuffer RB-LR-Handler(tag: 286, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,464+0000 INFO LocalIOProvider LR-Handler(tag: 286, GET) rbuf: RB-LR-Handler(tag: 286, GET)
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 2610, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 286, GET) unregistering (last)
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 287, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,464+0000 INFO ReadBuffer RB-LR-Handler(tag: 286, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 2608, GET) unregistering (last)
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 2610, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 2610, GET) -> 288
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 287, GET) reader: LR-Handler(tag: 287, GET)
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 287, GET) sending length: 543, 1671906019
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 2611, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 2609, GET) sending length: 543, 2048423985
+2013-08-27 01:14:03,464+0000 INFO ReadBuffer RB-LR-Handler(tag: 287, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,464+0000 INFO ReadBuffer RB-LR-Handler(tag: 287, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 2611, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,464+0000 INFO LocalIOProvider LR-Handler(tag: 287, GET) rbuf: RB-LR-Handler(tag: 287, GET)
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 287, GET) unregistering (last)
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 2611, GET) -> 289
+2013-08-27 01:14:03,464+0000 INFO ReadBuffer RB-LR-Handler(tag: 287, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 2609, GET) unregistering (last)
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 288, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 2612, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 288, GET) reader: LR-Handler(tag: 288, GET)
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 2612, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 288, GET) sending length: 543, 1153793061
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 2612, GET) -> 290
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 2610, GET) sending length: 543, 22643817
+2013-08-27 01:14:03,464+0000 INFO ReadBuffer RB-LR-Handler(tag: 288, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,464+0000 INFO ReadBuffer RB-LR-Handler(tag: 288, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,464+0000 INFO GetFileHandler Handler(tag: 2613, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,464+0000 INFO LocalIOProvider LR-Handler(tag: 288, GET) rbuf: RB-LR-Handler(tag: 288, GET)
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 288, GET) unregistering (last)
+2013-08-27 01:14:03,465+0000 INFO ReadBuffer RB-LR-Handler(tag: 288, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 2610, GET) unregistering (last)
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 2613, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 289, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 2613, GET) -> 291
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 289, GET) reader: LR-Handler(tag: 289, GET)
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 289, GET) sending length: 543, 1777164509
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 2614, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 2611, GET) sending length: 543, 1601340287
+2013-08-27 01:14:03,465+0000 INFO ReadBuffer RB-LR-Handler(tag: 289, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 2614, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,465+0000 INFO ReadBuffer RB-LR-Handler(tag: 289, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,465+0000 INFO LocalIOProvider LR-Handler(tag: 289, GET) rbuf: RB-LR-Handler(tag: 289, GET)
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 2614, GET) -> 292
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 289, GET) unregistering (last)
+2013-08-27 01:14:03,465+0000 INFO ReadBuffer RB-LR-Handler(tag: 289, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 2611, GET) unregistering (last)
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 290, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 290, GET) reader: LR-Handler(tag: 290, GET)
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 290, GET) sending length: 543, 1850701830
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 2612, GET) sending length: 543, 592513662
+2013-08-27 01:14:03,465+0000 INFO ReadBuffer RB-LR-Handler(tag: 290, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,465+0000 INFO ReadBuffer RB-LR-Handler(tag: 290, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,465+0000 INFO LocalIOProvider LR-Handler(tag: 290, GET) rbuf: RB-LR-Handler(tag: 290, GET)
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 290, GET) unregistering (last)
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 291, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,465+0000 INFO ReadBuffer RB-LR-Handler(tag: 290, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 2612, GET) unregistering (last)
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 291, GET) reader: LR-Handler(tag: 291, GET)
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 291, GET) sending length: 543, 1788226358
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 2613, GET) sending length: 543, 686759141
+2013-08-27 01:14:03,465+0000 INFO ReadBuffer RB-LR-Handler(tag: 291, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,465+0000 INFO ReadBuffer RB-LR-Handler(tag: 291, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,465+0000 INFO LocalIOProvider LR-Handler(tag: 291, GET) rbuf: RB-LR-Handler(tag: 291, GET)
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 291, GET) unregistering (last)
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 292, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,465+0000 INFO ReadBuffer RB-LR-Handler(tag: 291, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 2613, GET) unregistering (last)
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 292, GET) reader: LR-Handler(tag: 292, GET)
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 292, GET) sending length: 543, 683166940
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 2614, GET) sending length: 543, 1539183718
+2013-08-27 01:14:03,465+0000 INFO ReadBuffer RB-LR-Handler(tag: 292, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,465+0000 INFO ReadBuffer RB-LR-Handler(tag: 292, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,465+0000 INFO LocalIOProvider LR-Handler(tag: 292, GET) rbuf: RB-LR-Handler(tag: 292, GET)
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 292, GET) unregistering (last)
+2013-08-27 01:14:03,465+0000 INFO ReadBuffer RB-LR-Handler(tag: 292, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,465+0000 INFO GetFileHandler Handler(tag: 2614, GET) unregistering (last)
+2013-08-27 01:14:03,466+0000 INFO GetFileHandler Handler(tag: 2615, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,466+0000 INFO GetFileHandler Handler(tag: 2615, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,466+0000 INFO GetFileHandler Handler(tag: 2615, GET) -> 293
+2013-08-27 01:14:03,466+0000 INFO GetFileHandler Handler(tag: 293, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,466+0000 INFO GetFileHandler Handler(tag: 293, GET) reader: LR-Handler(tag: 293, GET)
+2013-08-27 01:14:03,466+0000 INFO GetFileHandler Handler(tag: 293, GET) sending length: 543, 662823661
+2013-08-27 01:14:03,466+0000 INFO GetFileHandler Handler(tag: 2615, GET) sending length: 543, 1079593438
+2013-08-27 01:14:03,466+0000 INFO ReadBuffer RB-LR-Handler(tag: 293, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,466+0000 INFO ReadBuffer RB-LR-Handler(tag: 293, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,466+0000 INFO LocalIOProvider LR-Handler(tag: 293, GET) rbuf: RB-LR-Handler(tag: 293, GET)
+2013-08-27 01:14:03,466+0000 INFO GetFileHandler Handler(tag: 293, GET) unregistering (last)
+2013-08-27 01:14:03,466+0000 INFO ReadBuffer RB-LR-Handler(tag: 293, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,466+0000 INFO GetFileHandler Handler(tag: 2615, GET) unregistering (last)
+2013-08-27 01:14:03,467+0000 INFO GetFileHandler Handler(tag: 2616, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,467+0000 INFO GetFileHandler Handler(tag: 2616, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,468+0000 INFO GetFileHandler Handler(tag: 2616, GET) -> 294
+2013-08-27 01:14:03,468+0000 INFO GetFileHandler Handler(tag: 294, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,468+0000 INFO GetFileHandler Handler(tag: 294, GET) reader: LR-Handler(tag: 294, GET)
+2013-08-27 01:14:03,468+0000 INFO GetFileHandler Handler(tag: 294, GET) sending length: 543, 1055629929
+2013-08-27 01:14:03,468+0000 INFO GetFileHandler Handler(tag: 2616, GET) sending length: 543, 1609808836
+2013-08-27 01:14:03,468+0000 INFO ReadBuffer RB-LR-Handler(tag: 294, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,468+0000 INFO ReadBuffer RB-LR-Handler(tag: 294, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,468+0000 INFO LocalIOProvider LR-Handler(tag: 294, GET) rbuf: RB-LR-Handler(tag: 294, GET)
+2013-08-27 01:14:03,468+0000 INFO GetFileHandler Handler(tag: 294, GET) unregistering (last)
+2013-08-27 01:14:03,468+0000 INFO ReadBuffer RB-LR-Handler(tag: 294, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,468+0000 INFO GetFileHandler Handler(tag: 2616, GET) unregistering (last)
+2013-08-27 01:14:03,469+0000 INFO GetFileHandler Handler(tag: 2617, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,469+0000 INFO GetFileHandler Handler(tag: 2617, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,469+0000 INFO GetFileHandler Handler(tag: 2617, GET) -> 295
+2013-08-27 01:14:03,469+0000 INFO GetFileHandler Handler(tag: 295, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:03,469+0000 INFO GetFileHandler Handler(tag: 295, GET) reader: LR-Handler(tag: 295, GET)
+2013-08-27 01:14:03,469+0000 INFO GetFileHandler Handler(tag: 295, GET) sending length: 543, 681653798
+2013-08-27 01:14:03,469+0000 INFO GetFileHandler Handler(tag: 2617, GET) sending length: 543, 1877609888
+2013-08-27 01:14:03,469+0000 INFO ReadBuffer RB-LR-Handler(tag: 295, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:03,469+0000 INFO ReadBuffer RB-LR-Handler(tag: 295, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,469+0000 INFO LocalIOProvider LR-Handler(tag: 295, GET) rbuf: RB-LR-Handler(tag: 295, GET)
+2013-08-27 01:14:03,469+0000 INFO GetFileHandler Handler(tag: 2618, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,469+0000 INFO GetFileHandler Handler(tag: 295, GET) unregistering (last)
+2013-08-27 01:14:03,469+0000 INFO GetFileHandler Handler(tag: 2617, GET) unregistering (last)
+2013-08-27 01:14:03,469+0000 INFO ReadBuffer RB-LR-Handler(tag: 295, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,469+0000 INFO GetFileHandler Handler(tag: 2618, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,469+0000 INFO GetFileHandler Handler(tag: 2618, GET) -> 296
+2013-08-27 01:14:03,469+0000 INFO GetFileHandler Handler(tag: 296, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,469+0000 INFO GetFileHandler Handler(tag: 296, GET) reader: LR-Handler(tag: 296, GET)
+2013-08-27 01:14:03,469+0000 INFO GetFileHandler Handler(tag: 296, GET) sending length: 2093, 2077760136
+2013-08-27 01:14:03,469+0000 INFO GetFileHandler Handler(tag: 2618, GET) sending length: 2093, 683021885
+2013-08-27 01:14:03,469+0000 INFO ReadBuffer RB-LR-Handler(tag: 296, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,469+0000 INFO ReadBuffer RB-LR-Handler(tag: 296, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,469+0000 INFO LocalIOProvider LR-Handler(tag: 296, GET) rbuf: RB-LR-Handler(tag: 296, GET)
+2013-08-27 01:14:03,469+0000 INFO GetFileHandler Handler(tag: 296, GET) unregistering (last)
+2013-08-27 01:14:03,469+0000 INFO ReadBuffer RB-LR-Handler(tag: 296, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,469+0000 INFO GetFileHandler Handler(tag: 2618, GET) unregistering (last)
+2013-08-27 01:14:03,469+0000 INFO GetFileHandler Handler(tag: 2619, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,469+0000 INFO GetFileHandler Handler(tag: 2619, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 2619, GET) -> 297
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 297, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 297, GET) reader: LR-Handler(tag: 297, GET)
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 297, GET) sending length: 2093, 1639608796
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 2619, GET) sending length: 2093, 394876068
+2013-08-27 01:14:03,470+0000 INFO ReadBuffer RB-LR-Handler(tag: 297, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,470+0000 INFO ReadBuffer RB-LR-Handler(tag: 297, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,470+0000 INFO LocalIOProvider LR-Handler(tag: 297, GET) rbuf: RB-LR-Handler(tag: 297, GET)
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 297, GET) unregistering (last)
+2013-08-27 01:14:03,470+0000 INFO ReadBuffer RB-LR-Handler(tag: 297, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 2619, GET) unregistering (last)
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 2620, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 2620, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 2620, GET) -> 298
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 298, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 298, GET) reader: LR-Handler(tag: 298, GET)
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 298, GET) sending length: 2093, 1865175183
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 2620, GET) sending length: 2093, 1180505422
+2013-08-27 01:14:03,470+0000 INFO ReadBuffer RB-LR-Handler(tag: 298, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,470+0000 INFO ReadBuffer RB-LR-Handler(tag: 298, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 2621, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,470+0000 INFO LocalIOProvider LR-Handler(tag: 298, GET) rbuf: RB-LR-Handler(tag: 298, GET)
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 298, GET) unregistering (last)
+2013-08-27 01:14:03,470+0000 INFO ReadBuffer RB-LR-Handler(tag: 298, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 2620, GET) unregistering (last)
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 2621, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 2621, GET) -> 299
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 299, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 299, GET) reader: LR-Handler(tag: 299, GET)
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 299, GET) sending length: 2093, 921328496
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 2621, GET) sending length: 2093, 1410937402
+2013-08-27 01:14:03,470+0000 INFO ReadBuffer RB-LR-Handler(tag: 299, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,470+0000 INFO ReadBuffer RB-LR-Handler(tag: 299, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,470+0000 INFO LocalIOProvider LR-Handler(tag: 299, GET) rbuf: RB-LR-Handler(tag: 299, GET)
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 299, GET) unregistering (last)
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 2622, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,470+0000 INFO ReadBuffer RB-LR-Handler(tag: 299, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 2621, GET) unregistering (last)
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 2622, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 2622, GET) -> 300
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 300, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 300, GET) reader: LR-Handler(tag: 300, GET)
+2013-08-27 01:14:03,470+0000 INFO GetFileHandler Handler(tag: 300, GET) sending length: 2093, 1771766873
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 2622, GET) sending length: 2093, 1077585209
+2013-08-27 01:14:03,471+0000 INFO ReadBuffer RB-LR-Handler(tag: 300, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,471+0000 INFO ReadBuffer RB-LR-Handler(tag: 300, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,471+0000 INFO LocalIOProvider LR-Handler(tag: 300, GET) rbuf: RB-LR-Handler(tag: 300, GET)
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 300, GET) unregistering (last)
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 2623, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,471+0000 INFO ReadBuffer RB-LR-Handler(tag: 300, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 2622, GET) unregistering (last)
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 2623, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 2623, GET) -> 301
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 301, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 301, GET) reader: LR-Handler(tag: 301, GET)
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 301, GET) sending length: 2093, 1879359552
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 2623, GET) sending length: 2093, 1206510388
+2013-08-27 01:14:03,471+0000 INFO ReadBuffer RB-LR-Handler(tag: 301, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,471+0000 INFO ReadBuffer RB-LR-Handler(tag: 301, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,471+0000 INFO LocalIOProvider LR-Handler(tag: 301, GET) rbuf: RB-LR-Handler(tag: 301, GET)
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 301, GET) unregistering (last)
+2013-08-27 01:14:03,471+0000 INFO ReadBuffer RB-LR-Handler(tag: 301, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 2623, GET) unregistering (last)
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 2624, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 2624, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 2624, GET) -> 302
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 302, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 302, GET) reader: LR-Handler(tag: 302, GET)
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 302, GET) sending length: 2093, 695450558
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 2624, GET) sending length: 2093, 1831521332
+2013-08-27 01:14:03,471+0000 INFO ReadBuffer RB-LR-Handler(tag: 302, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,471+0000 INFO ReadBuffer RB-LR-Handler(tag: 302, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,471+0000 INFO LocalIOProvider LR-Handler(tag: 302, GET) rbuf: RB-LR-Handler(tag: 302, GET)
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 302, GET) unregistering (last)
+2013-08-27 01:14:03,471+0000 INFO ReadBuffer RB-LR-Handler(tag: 302, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 2624, GET) unregistering (last)
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 2625, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 2625, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 2625, GET) -> 303
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 303, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 303, GET) reader: LR-Handler(tag: 303, GET)
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 303, GET) sending length: 2093, 668074440
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 2625, GET) sending length: 2093, 1282606564
+2013-08-27 01:14:03,471+0000 INFO ReadBuffer RB-LR-Handler(tag: 303, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,471+0000 INFO ReadBuffer RB-LR-Handler(tag: 303, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,471+0000 INFO LocalIOProvider LR-Handler(tag: 303, GET) rbuf: RB-LR-Handler(tag: 303, GET)
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 303, GET) unregistering (last)
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 2626, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,471+0000 INFO ReadBuffer RB-LR-Handler(tag: 303, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,471+0000 INFO GetFileHandler Handler(tag: 2625, GET) unregistering (last)
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 2626, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 2626, GET) -> 304
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 304, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 304, GET) reader: LR-Handler(tag: 304, GET)
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 304, GET) sending length: 2093, 1694353035
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 2626, GET) sending length: 2093, 1358300025
+2013-08-27 01:14:03,472+0000 INFO ReadBuffer RB-LR-Handler(tag: 304, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,472+0000 INFO ReadBuffer RB-LR-Handler(tag: 304, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,472+0000 INFO LocalIOProvider LR-Handler(tag: 304, GET) rbuf: RB-LR-Handler(tag: 304, GET)
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 304, GET) unregistering (last)
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 2627, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,472+0000 INFO ReadBuffer RB-LR-Handler(tag: 304, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 2626, GET) unregistering (last)
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 2627, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 2627, GET) -> 305
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 305, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 305, GET) reader: LR-Handler(tag: 305, GET)
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 305, GET) sending length: 2093, 1924425353
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 2627, GET) sending length: 2093, 565700404
+2013-08-27 01:14:03,472+0000 INFO ReadBuffer RB-LR-Handler(tag: 305, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,472+0000 INFO ReadBuffer RB-LR-Handler(tag: 305, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 2628, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,472+0000 INFO LocalIOProvider LR-Handler(tag: 305, GET) rbuf: RB-LR-Handler(tag: 305, GET)
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 305, GET) unregistering (last)
+2013-08-27 01:14:03,472+0000 INFO ReadBuffer RB-LR-Handler(tag: 305, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 2628, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 2627, GET) unregistering (last)
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 2628, GET) -> 306
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 306, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 306, GET) reader: LR-Handler(tag: 306, GET)
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 306, GET) sending length: 2093, 355004788
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 2628, GET) sending length: 2093, 855900550
+2013-08-27 01:14:03,472+0000 INFO ReadBuffer RB-LR-Handler(tag: 306, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,472+0000 INFO ReadBuffer RB-LR-Handler(tag: 306, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,472+0000 INFO LocalIOProvider LR-Handler(tag: 306, GET) rbuf: RB-LR-Handler(tag: 306, GET)
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 2629, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 306, GET) unregistering (last)
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 2628, GET) unregistering (last)
+2013-08-27 01:14:03,472+0000 INFO ReadBuffer RB-LR-Handler(tag: 306, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 2629, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 2629, GET) -> 307
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 307, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,472+0000 INFO GetFileHandler Handler(tag: 307, GET) reader: LR-Handler(tag: 307, GET)
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 307, GET) sending length: 2093, 1123254663
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 2629, GET) sending length: 2093, 12380264
+2013-08-27 01:14:03,473+0000 INFO ReadBuffer RB-LR-Handler(tag: 307, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,473+0000 INFO ReadBuffer RB-LR-Handler(tag: 307, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,473+0000 INFO LocalIOProvider LR-Handler(tag: 307, GET) rbuf: RB-LR-Handler(tag: 307, GET)
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 307, GET) unregistering (last)
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 2630, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,473+0000 INFO ReadBuffer RB-LR-Handler(tag: 307, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 2629, GET) unregistering (last)
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 2630, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 2630, GET) -> 308
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 308, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 308, GET) reader: LR-Handler(tag: 308, GET)
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 308, GET) sending length: 2093, 106758567
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 2630, GET) sending length: 2093, 1142390324
+2013-08-27 01:14:03,473+0000 INFO ReadBuffer RB-LR-Handler(tag: 308, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,473+0000 INFO ReadBuffer RB-LR-Handler(tag: 308, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,473+0000 INFO LocalIOProvider LR-Handler(tag: 308, GET) rbuf: RB-LR-Handler(tag: 308, GET)
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 2631, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 308, GET) unregistering (last)
+2013-08-27 01:14:03,473+0000 INFO ReadBuffer RB-LR-Handler(tag: 308, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 2630, GET) unregistering (last)
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 2631, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 2631, GET) -> 309
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 309, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 309, GET) reader: LR-Handler(tag: 309, GET)
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 309, GET) sending length: 2093, 2069901328
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 2631, GET) sending length: 2093, 1744021943
+2013-08-27 01:14:03,473+0000 INFO ReadBuffer RB-LR-Handler(tag: 309, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,473+0000 INFO ReadBuffer RB-LR-Handler(tag: 309, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,473+0000 INFO LocalIOProvider LR-Handler(tag: 309, GET) rbuf: RB-LR-Handler(tag: 309, GET)
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 309, GET) unregistering (last)
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 2632, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 2631, GET) unregistering (last)
+2013-08-27 01:14:03,473+0000 INFO ReadBuffer RB-LR-Handler(tag: 309, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 2632, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 2632, GET) -> 310
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 310, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 310, GET) reader: LR-Handler(tag: 310, GET)
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 310, GET) sending length: 2093, 1198969446
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 2632, GET) sending length: 2093, 1240419121
+2013-08-27 01:14:03,473+0000 INFO ReadBuffer RB-LR-Handler(tag: 310, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,473+0000 INFO ReadBuffer RB-LR-Handler(tag: 310, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,473+0000 INFO LocalIOProvider LR-Handler(tag: 310, GET) rbuf: RB-LR-Handler(tag: 310, GET)
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 310, GET) unregistering (last)
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 2633, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,473+0000 INFO ReadBuffer RB-LR-Handler(tag: 310, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,473+0000 INFO GetFileHandler Handler(tag: 2632, GET) unregistering (last)
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 2633, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 2633, GET) -> 311
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 311, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 311, GET) reader: LR-Handler(tag: 311, GET)
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 311, GET) sending length: 2093, 705236334
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 2633, GET) sending length: 2093, 944817745
+2013-08-27 01:14:03,474+0000 INFO ReadBuffer RB-LR-Handler(tag: 311, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:03,474+0000 INFO ReadBuffer RB-LR-Handler(tag: 311, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,474+0000 INFO LocalIOProvider LR-Handler(tag: 311, GET) rbuf: RB-LR-Handler(tag: 311, GET)
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 311, GET) unregistering (last)
+2013-08-27 01:14:03,474+0000 INFO ReadBuffer RB-LR-Handler(tag: 311, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 2633, GET) unregistering (last)
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 2634, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 2634, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 2634, GET) -> 312
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 312, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 312, GET) reader: LR-Handler(tag: 312, GET)
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 312, GET) sending length: 5032, 1850369317
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 2634, GET) sending length: 5032, 1446418612
+2013-08-27 01:14:03,474+0000 INFO ReadBuffer RB-LR-Handler(tag: 312, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,474+0000 INFO ReadBuffer RB-LR-Handler(tag: 312, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,474+0000 INFO LocalIOProvider LR-Handler(tag: 312, GET) rbuf: RB-LR-Handler(tag: 312, GET)
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 2635, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 312, GET) unregistering (last)
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 2634, GET) unregistering (last)
+2013-08-27 01:14:03,474+0000 INFO ReadBuffer RB-LR-Handler(tag: 312, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 2635, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 2635, GET) -> 313
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 313, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 313, GET) reader: LR-Handler(tag: 313, GET)
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 313, GET) sending length: 5032, 121943304
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 2635, GET) sending length: 5032, 801711090
+2013-08-27 01:14:03,474+0000 INFO ReadBuffer RB-LR-Handler(tag: 313, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,474+0000 INFO ReadBuffer RB-LR-Handler(tag: 313, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,474+0000 INFO LocalIOProvider LR-Handler(tag: 313, GET) rbuf: RB-LR-Handler(tag: 313, GET)
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 313, GET) unregistering (last)
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 2636, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,474+0000 INFO ReadBuffer RB-LR-Handler(tag: 313, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 2635, GET) unregistering (last)
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 2636, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 2636, GET) -> 314
+2013-08-27 01:14:03,474+0000 INFO GetFileHandler Handler(tag: 314, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 314, GET) reader: LR-Handler(tag: 314, GET)
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 314, GET) sending length: 5032, 1335732606
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 2636, GET) sending length: 5032, 2011346951
+2013-08-27 01:14:03,475+0000 INFO ReadBuffer RB-LR-Handler(tag: 314, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,475+0000 INFO ReadBuffer RB-LR-Handler(tag: 314, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,475+0000 INFO LocalIOProvider LR-Handler(tag: 314, GET) rbuf: RB-LR-Handler(tag: 314, GET)
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 314, GET) unregistering (last)
+2013-08-27 01:14:03,475+0000 INFO ReadBuffer RB-LR-Handler(tag: 314, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 2636, GET) unregistering (last)
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 2637, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 2637, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 2637, GET) -> 315
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 315, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 315, GET) reader: LR-Handler(tag: 315, GET)
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 315, GET) sending length: 5032, 1206155004
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 2637, GET) sending length: 5032, 1749008195
+2013-08-27 01:14:03,475+0000 INFO ReadBuffer RB-LR-Handler(tag: 315, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,475+0000 INFO ReadBuffer RB-LR-Handler(tag: 315, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,475+0000 INFO LocalIOProvider LR-Handler(tag: 315, GET) rbuf: RB-LR-Handler(tag: 315, GET)
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 2638, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 315, GET) unregistering (last)
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 2637, GET) unregistering (last)
+2013-08-27 01:14:03,475+0000 INFO ReadBuffer RB-LR-Handler(tag: 315, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 2638, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 2638, GET) -> 316
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 316, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 316, GET) reader: LR-Handler(tag: 316, GET)
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 316, GET) sending length: 5032, 561340542
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 2638, GET) sending length: 5032, 554828123
+2013-08-27 01:14:03,475+0000 INFO ReadBuffer RB-LR-Handler(tag: 316, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,475+0000 INFO ReadBuffer RB-LR-Handler(tag: 316, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,475+0000 INFO LocalIOProvider LR-Handler(tag: 316, GET) rbuf: RB-LR-Handler(tag: 316, GET)
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 316, GET) unregistering (last)
+2013-08-27 01:14:03,475+0000 INFO ReadBuffer RB-LR-Handler(tag: 316, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 2639, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 2638, GET) unregistering (last)
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 2639, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 2639, GET) -> 317
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 317, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 317, GET) reader: LR-Handler(tag: 317, GET)
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 317, GET) sending length: 5032, 707143228
+2013-08-27 01:14:03,475+0000 INFO GetFileHandler Handler(tag: 2639, GET) sending length: 5032, 781730498
+2013-08-27 01:14:03,475+0000 INFO ReadBuffer RB-LR-Handler(tag: 317, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,475+0000 INFO ReadBuffer RB-LR-Handler(tag: 317, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,475+0000 INFO LocalIOProvider LR-Handler(tag: 317, GET) rbuf: RB-LR-Handler(tag: 317, GET)
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 317, GET) unregistering (last)
+2013-08-27 01:14:03,476+0000 INFO ReadBuffer RB-LR-Handler(tag: 317, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 2639, GET) unregistering (last)
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 2640, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 2640, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 2640, GET) -> 318
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 318, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 318, GET) reader: LR-Handler(tag: 318, GET)
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 318, GET) sending length: 5032, 1761579281
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 2640, GET) sending length: 5032, 1653418225
+2013-08-27 01:14:03,476+0000 INFO ReadBuffer RB-LR-Handler(tag: 318, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,476+0000 INFO ReadBuffer RB-LR-Handler(tag: 318, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,476+0000 INFO LocalIOProvider LR-Handler(tag: 318, GET) rbuf: RB-LR-Handler(tag: 318, GET)
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 318, GET) unregistering (last)
+2013-08-27 01:14:03,476+0000 INFO ReadBuffer RB-LR-Handler(tag: 318, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 2640, GET) unregistering (last)
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 2641, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 2641, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 2641, GET) -> 319
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 319, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 319, GET) reader: LR-Handler(tag: 319, GET)
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 319, GET) sending length: 5032, 43341430
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 2641, GET) sending length: 5032, 442457677
+2013-08-27 01:14:03,476+0000 INFO ReadBuffer RB-LR-Handler(tag: 319, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,476+0000 INFO ReadBuffer RB-LR-Handler(tag: 319, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,476+0000 INFO LocalIOProvider LR-Handler(tag: 319, GET) rbuf: RB-LR-Handler(tag: 319, GET)
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 319, GET) unregistering (last)
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 2642, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,476+0000 INFO ReadBuffer RB-LR-Handler(tag: 319, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 2641, GET) unregistering (last)
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 2642, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 2642, GET) -> 320
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 320, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 320, GET) reader: LR-Handler(tag: 320, GET)
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 320, GET) sending length: 5032, 530634372
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 2642, GET) sending length: 5032, 2019787860
+2013-08-27 01:14:03,476+0000 INFO ReadBuffer RB-LR-Handler(tag: 320, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,476+0000 INFO ReadBuffer RB-LR-Handler(tag: 320, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,476+0000 INFO LocalIOProvider LR-Handler(tag: 320, GET) rbuf: RB-LR-Handler(tag: 320, GET)
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 320, GET) unregistering (last)
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 2643, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,476+0000 INFO ReadBuffer RB-LR-Handler(tag: 320, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 2642, GET) unregistering (last)
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 2643, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,476+0000 INFO GetFileHandler Handler(tag: 2643, GET) -> 321
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 321, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 321, GET) reader: LR-Handler(tag: 321, GET)
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 321, GET) sending length: 5032, 710467494
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 2643, GET) sending length: 5032, 818094338
+2013-08-27 01:14:03,477+0000 INFO ReadBuffer RB-LR-Handler(tag: 321, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,477+0000 INFO ReadBuffer RB-LR-Handler(tag: 321, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,477+0000 INFO LocalIOProvider LR-Handler(tag: 321, GET) rbuf: RB-LR-Handler(tag: 321, GET)
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 321, GET) unregistering (last)
+2013-08-27 01:14:03,477+0000 INFO ReadBuffer RB-LR-Handler(tag: 321, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 2643, GET) unregistering (last)
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 2644, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 2644, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 2644, GET) -> 322
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 322, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 322, GET) reader: LR-Handler(tag: 322, GET)
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 322, GET) sending length: 5032, 856410920
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 2644, GET) sending length: 5032, 1262930246
+2013-08-27 01:14:03,477+0000 INFO ReadBuffer RB-LR-Handler(tag: 322, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,477+0000 INFO ReadBuffer RB-LR-Handler(tag: 322, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,477+0000 INFO LocalIOProvider LR-Handler(tag: 322, GET) rbuf: RB-LR-Handler(tag: 322, GET)
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 2645, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 322, GET) unregistering (last)
+2013-08-27 01:14:03,477+0000 INFO ReadBuffer RB-LR-Handler(tag: 322, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 2644, GET) unregistering (last)
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 2645, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 2645, GET) -> 323
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 323, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 323, GET) reader: LR-Handler(tag: 323, GET)
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 323, GET) sending length: 5032, 441718654
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 2645, GET) sending length: 5032, 114450099
+2013-08-27 01:14:03,477+0000 INFO ReadBuffer RB-LR-Handler(tag: 323, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,477+0000 INFO ReadBuffer RB-LR-Handler(tag: 323, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,477+0000 INFO LocalIOProvider LR-Handler(tag: 323, GET) rbuf: RB-LR-Handler(tag: 323, GET)
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 323, GET) unregistering (last)
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 2646, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,477+0000 INFO ReadBuffer RB-LR-Handler(tag: 323, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 2645, GET) unregistering (last)
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 2646, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 2646, GET) -> 324
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 324, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 324, GET) reader: LR-Handler(tag: 324, GET)
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 324, GET) sending length: 5032, 141259909
+2013-08-27 01:14:03,477+0000 INFO GetFileHandler Handler(tag: 2646, GET) sending length: 5032, 1185860628
+2013-08-27 01:14:03,477+0000 INFO ReadBuffer RB-LR-Handler(tag: 324, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,477+0000 INFO ReadBuffer RB-LR-Handler(tag: 324, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,477+0000 INFO LocalIOProvider LR-Handler(tag: 324, GET) rbuf: RB-LR-Handler(tag: 324, GET)
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 324, GET) unregistering (last)
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 2647, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,478+0000 INFO ReadBuffer RB-LR-Handler(tag: 324, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 2646, GET) unregistering (last)
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 2647, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 2647, GET) -> 325
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 325, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 325, GET) reader: LR-Handler(tag: 325, GET)
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 325, GET) sending length: 5032, 1579302610
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 2647, GET) sending length: 5032, 441089350
+2013-08-27 01:14:03,478+0000 INFO ReadBuffer RB-LR-Handler(tag: 325, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,478+0000 INFO ReadBuffer RB-LR-Handler(tag: 325, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,478+0000 INFO LocalIOProvider LR-Handler(tag: 325, GET) rbuf: RB-LR-Handler(tag: 325, GET)
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 325, GET) unregistering (last)
+2013-08-27 01:14:03,478+0000 INFO ReadBuffer RB-LR-Handler(tag: 325, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 2647, GET) unregistering (last)
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 2648, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 2648, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 2648, GET) -> 326
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 326, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 326, GET) reader: LR-Handler(tag: 326, GET)
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 326, GET) sending length: 5032, 969437262
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 2648, GET) sending length: 5032, 373632645
+2013-08-27 01:14:03,478+0000 INFO ReadBuffer RB-LR-Handler(tag: 326, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,478+0000 INFO ReadBuffer RB-LR-Handler(tag: 326, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,478+0000 INFO LocalIOProvider LR-Handler(tag: 326, GET) rbuf: RB-LR-Handler(tag: 326, GET)
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 326, GET) unregistering (last)
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 2649, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 2648, GET) unregistering (last)
+2013-08-27 01:14:03,478+0000 INFO ReadBuffer RB-LR-Handler(tag: 326, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 2649, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 2649, GET) -> 327
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 327, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 327, GET) reader: LR-Handler(tag: 327, GET)
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 327, GET) sending length: 5032, 179640746
+2013-08-27 01:14:03,478+0000 INFO ReadBuffer RB-LR-Handler(tag: 327, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:03,478+0000 INFO ReadBuffer RB-LR-Handler(tag: 327, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 2649, GET) sending length: 5032, 835861492
+2013-08-27 01:14:03,478+0000 INFO LocalIOProvider LR-Handler(tag: 327, GET) rbuf: RB-LR-Handler(tag: 327, GET)
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 327, GET) unregistering (last)
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 2650, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,478+0000 INFO ReadBuffer RB-LR-Handler(tag: 327, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 2649, GET) unregistering (last)
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 2650, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 2650, GET) -> 328
+2013-08-27 01:14:03,478+0000 INFO GetFileHandler Handler(tag: 328, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,479+0000 INFO GetFileHandler Handler(tag: 328, GET) reader: LR-Handler(tag: 328, GET)
+2013-08-27 01:14:03,479+0000 INFO GetFileHandler Handler(tag: 328, GET) sending length: 6078, 1235943735
+2013-08-27 01:14:03,479+0000 INFO GetFileHandler Handler(tag: 2650, GET) sending length: 6078, 2044520361
+2013-08-27 01:14:03,479+0000 INFO ReadBuffer RB-LR-Handler(tag: 328, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:03,479+0000 INFO GetFileHandler Handler(tag: 2651, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,479+0000 INFO ReadBuffer RB-LR-Handler(tag: 328, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,479+0000 INFO LocalIOProvider LR-Handler(tag: 328, GET) rbuf: RB-LR-Handler(tag: 328, GET)
+2013-08-27 01:14:03,479+0000 INFO GetFileHandler Handler(tag: 2651, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,479+0000 INFO GetFileHandler Handler(tag: 328, GET) unregistering (last)
+2013-08-27 01:14:03,479+0000 INFO GetFileHandler Handler(tag: 2650, GET) unregistering (last)
+2013-08-27 01:14:03,479+0000 INFO ReadBuffer RB-LR-Handler(tag: 328, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,479+0000 INFO GetFileHandler Handler(tag: 2651, GET) -> 329
+2013-08-27 01:14:03,479+0000 INFO GetFileHandler Handler(tag: 329, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,479+0000 INFO GetFileHandler Handler(tag: 329, GET) reader: LR-Handler(tag: 329, GET)
+2013-08-27 01:14:03,479+0000 INFO GetFileHandler Handler(tag: 329, GET) sending length: 6078, 1208820522
+2013-08-27 01:14:03,479+0000 INFO GetFileHandler Handler(tag: 2651, GET) sending length: 6078, 1451212634
+2013-08-27 01:14:03,479+0000 INFO ReadBuffer RB-LR-Handler(tag: 329, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:03,479+0000 INFO GetFileHandler Handler(tag: 2652, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,479+0000 INFO ReadBuffer RB-LR-Handler(tag: 329, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,479+0000 INFO LocalIOProvider LR-Handler(tag: 329, GET) rbuf: RB-LR-Handler(tag: 329, GET)
+2013-08-27 01:14:03,479+0000 INFO GetFileHandler Handler(tag: 329, GET) unregistering (last)
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+2013-08-27 01:14:03,482+0000 INFO GetFileHandler Handler(tag: 2664, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,482+0000 INFO GetFileHandler Handler(tag: 341, GET) unregistering (last)
+2013-08-27 01:14:03,482+0000 INFO ReadBuffer RB-LR-Handler(tag: 341, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,482+0000 INFO GetFileHandler Handler(tag: 2663, GET) unregistering (last)
+2013-08-27 01:14:03,482+0000 INFO GetFileHandler Handler(tag: 2664, GET) -> 342
+2013-08-27 01:14:03,482+0000 INFO GetFileHandler Handler(tag: 342, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,482+0000 INFO GetFileHandler Handler(tag: 342, GET) reader: LR-Handler(tag: 342, GET)
+2013-08-27 01:14:03,482+0000 INFO GetFileHandler Handler(tag: 342, GET) sending length: 6078, 720758883
+2013-08-27 01:14:03,483+0000 INFO GetFileHandler Handler(tag: 2664, GET) sending length: 6078, 1986777501
+2013-08-27 01:14:03,483+0000 INFO ReadBuffer RB-LR-Handler(tag: 342, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:03,483+0000 INFO ReadBuffer RB-LR-Handler(tag: 342, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,483+0000 INFO LocalIOProvider LR-Handler(tag: 342, GET) rbuf: RB-LR-Handler(tag: 342, GET)
+2013-08-27 01:14:03,483+0000 INFO GetFileHandler Handler(tag: 2665, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,483+0000 INFO GetFileHandler Handler(tag: 342, GET) unregistering (last)
+2013-08-27 01:14:03,483+0000 INFO ReadBuffer RB-LR-Handler(tag: 342, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,483+0000 INFO GetFileHandler Handler(tag: 2664, GET) unregistering (last)
+2013-08-27 01:14:03,483+0000 INFO GetFileHandler Handler(tag: 2665, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,483+0000 INFO GetFileHandler Handler(tag: 2665, GET) -> 343
+2013-08-27 01:14:03,483+0000 INFO GetFileHandler Handler(tag: 343, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:03,483+0000 INFO GetFileHandler Handler(tag: 343, GET) reader: LR-Handler(tag: 343, GET)
+2013-08-27 01:14:03,483+0000 INFO GetFileHandler Handler(tag: 343, GET) sending length: 6078, 1203499810
+2013-08-27 01:14:03,483+0000 INFO GetFileHandler Handler(tag: 2665, GET) sending length: 6078, 72835577
+2013-08-27 01:14:03,483+0000 INFO ReadBuffer RB-LR-Handler(tag: 343, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:03,483+0000 INFO ReadBuffer RB-LR-Handler(tag: 343, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,483+0000 INFO LocalIOProvider LR-Handler(tag: 343, GET) rbuf: RB-LR-Handler(tag: 343, GET)
+2013-08-27 01:14:03,483+0000 INFO GetFileHandler Handler(tag: 343, GET) unregistering (last)
+2013-08-27 01:14:03,483+0000 INFO GetFileHandler Handler(tag: 2665, GET) unregistering (last)
+2013-08-27 01:14:03,483+0000 INFO ReadBuffer RB-LR-Handler(tag: 343, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,484+0000 DEBUG Cpu Active workerid=0827-1301520-000001:000000
+2013-08-27 01:14:03,484+0000 INFO RequestHandler Handler(tag: 2666, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,484+0000 INFO RequestHandler Handler(tag: 344, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,485+0000 DEBUG Cpu Active workerid=0827-1301520-000001:000000
+2013-08-27 01:14:03,485+0000 INFO RequestHandler Handler(tag: 2667, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,485+0000 INFO RequestHandler Handler(tag: 345, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,486+0000 DEBUG Cpu Active workerid=0827-1301520-000001:000000
+2013-08-27 01:14:03,486+0000 INFO RequestHandler Handler(tag: 2668, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,486+0000 INFO RequestHandler Handler(tag: 346, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,486+0000 DEBUG Cpu Active workerid=0827-1301520-000001:000000
+2013-08-27 01:14:03,486+0000 INFO RequestHandler Handler(tag: 2669, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,486+0000 INFO RequestHandler Handler(tag: 347, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,487+0000 DEBUG Cpu Active workerid=0827-1301520-000001:000000
+2013-08-27 01:14:03,487+0000 INFO RequestHandler Handler(tag: 2670, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,487+0000 INFO RequestHandler Handler(tag: 348, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,488+0000 DEBUG Cpu Active workerid=0827-1301520-000001:000000
+2013-08-27 01:14:03,488+0000 INFO RequestHandler Handler(tag: 2671, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,488+0000 INFO RequestHandler Handler(tag: 349, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,489+0000 DEBUG Cpu Active workerid=0827-1301520-000001:000000
+2013-08-27 01:14:03,489+0000 INFO RequestHandler Handler(tag: 2672, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,489+0000 INFO RequestHandler Handler(tag: 350, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,490+0000 DEBUG Cpu Active workerid=0827-1301520-000001:000000
+2013-08-27 01:14:03,490+0000 INFO RequestHandler Handler(tag: 2673, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,490+0000 INFO RequestHandler Handler(tag: 351, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,491+0000 DEBUG Cpu Active workerid=0827-1301520-000001:000000
+2013-08-27 01:14:03,491+0000 INFO RequestHandler Handler(tag: 2674, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,491+0000 INFO RequestHandler Handler(tag: 352, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,492+0000 DEBUG Cpu Active workerid=0827-1301520-000001:000000
+2013-08-27 01:14:03,492+0000 INFO RequestHandler Handler(tag: 2675, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,492+0000 INFO RequestHandler Handler(tag: 353, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,493+0000 DEBUG Cpu Active workerid=0827-1301520-000001:000000
+2013-08-27 01:14:03,493+0000 INFO RequestHandler Handler(tag: 2676, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,493+0000 INFO RequestHandler Handler(tag: 354, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,493+0000 DEBUG Cpu Active workerid=0827-1301520-000001:000000
+2013-08-27 01:14:03,493+0000 INFO RequestHandler Handler(tag: 355, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,493+0000 INFO RequestHandler Handler(tag: 2677, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,494+0000 DEBUG Cpu Active workerid=0827-1301520-000001:000000
+2013-08-27 01:14:03,494+0000 INFO RequestHandler Handler(tag: 2678, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,494+0000 INFO RequestHandler Handler(tag: 356, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,495+0000 DEBUG Cpu Active workerid=0827-1301520-000001:000000
+2013-08-27 01:14:03,495+0000 INFO RequestHandler Handler(tag: 2679, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,495+0000 INFO RequestHandler Handler(tag: 357, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,496+0000 DEBUG Cpu Active workerid=0827-1301520-000001:000000
+2013-08-27 01:14:03,496+0000 INFO RequestHandler Handler(tag: 2680, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,496+0000 INFO RequestHandler Handler(tag: 358, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,497+0000 DEBUG Cpu Active workerid=0827-1301520-000001:000000
+2013-08-27 01:14:03,497+0000 INFO RequestHandler Handler(tag: 2681, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,497+0000 INFO RequestHandler Handler(tag: 359, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,767+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,767+0000 INFO RequestHandler Handler(tag: 3147, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,767+0000 INFO RequestHandler Handler(tag: 360, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,768+0000 INFO PutFileHandler Handler(tag: 3148, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/p/runampl-pcztedel/wrapper.error
+2013-08-27 01:14:03,768+0000 INFO PutFileHandler Handler(tag: 3148, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-pcztedel.error
+2013-08-27 01:14:03,770+0000 INFO PutFileCommand Sending Command(tag: 361, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,771+0000 INFO PutFileCommand Command(tag: 361, PUT) (t) sending data
+2013-08-27 01:14:03,771+0000 INFO PutFileHandler Handler(tag: 3148, PUT) -> 361
+2013-08-27 01:14:03,771+0000 INFO PutFileHandler Handler(tag: 361, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/p/runampl-pcztedel/wrapper.error
+2013-08-27 01:14:03,771+0000 INFO PutFileHandler Handler(tag: 361, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-pcztedel.error
+2013-08-27 01:14:03,771+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,771+0000 INFO RequestHandler Handler(tag: 3149, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,771+0000 INFO PutFileHandler Handler(tag: 3150, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/p/runampl-pcztedel/wrapper.log
+2013-08-27 01:14:03,771+0000 INFO PutFileHandler Handler(tag: 3150, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-pcztedel.info
+2013-08-27 01:14:03,771+0000 INFO PutFileCommand Sending Command(tag: 363, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,771+0000 INFO PutFileCommand Command(tag: 363, PUT) (t) sending data
+2013-08-27 01:14:03,771+0000 INFO PutFileHandler Handler(tag: 3150, PUT) -> 363
+2013-08-27 01:14:03,772+0000 INFO RequestHandler Handler(tag: 362, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,772+0000 INFO PutFileHandler Handler(tag: 363, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/p/runampl-pcztedel/wrapper.log
+2013-08-27 01:14:03,772+0000 INFO PutFileHandler Handler(tag: 363, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-pcztedel.info
+2013-08-27 01:14:03,779+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,779+0000 INFO RequestHandler Handler(tag: 3151, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,779+0000 INFO RequestHandler Handler(tag: 364, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,779+0000 INFO PutFileHandler Handler(tag: 3152, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/5/runampl-5cztedel/wrapper.error
+2013-08-27 01:14:03,779+0000 INFO PutFileHandler Handler(tag: 3152, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-5cztedel.error
+2013-08-27 01:14:03,779+0000 INFO PutFileCommand Sending Command(tag: 365, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,779+0000 INFO PutFileCommand Command(tag: 365, PUT) (t) sending data
+2013-08-27 01:14:03,779+0000 INFO PutFileHandler Handler(tag: 3152, PUT) -> 365
+2013-08-27 01:14:03,779+0000 INFO PutFileHandler Handler(tag: 365, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/5/runampl-5cztedel/wrapper.error
+2013-08-27 01:14:03,779+0000 INFO PutFileHandler Handler(tag: 365, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-5cztedel.error
+2013-08-27 01:14:03,779+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,779+0000 INFO RequestHandler Handler(tag: 3153, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,779+0000 INFO RequestHandler Handler(tag: 366, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,779+0000 INFO PutFileHandler Handler(tag: 3154, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/5/runampl-5cztedel/wrapper.log
+2013-08-27 01:14:03,779+0000 INFO PutFileHandler Handler(tag: 3154, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-5cztedel.info
+2013-08-27 01:14:03,779+0000 INFO PutFileCommand Sending Command(tag: 367, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,779+0000 INFO PutFileCommand Command(tag: 367, PUT) (t) sending data
+2013-08-27 01:14:03,779+0000 INFO PutFileHandler Handler(tag: 3154, PUT) -> 367
+2013-08-27 01:14:03,779+0000 INFO PutFileHandler Handler(tag: 367, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/5/runampl-5cztedel/wrapper.log
+2013-08-27 01:14:03,779+0000 INFO PutFileHandler Handler(tag: 367, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-5cztedel.info
+2013-08-27 01:14:03,780+0000 INFO PutFileHandler Handler(tag: 361, PUT) Transfer done
+2013-08-27 01:14:03,780+0000 INFO RequestHandler Handler(tag: 361, PUT) unregistering (send)
+2013-08-27 01:14:03,780+0000 INFO PutFileHandler Handler(tag: 3148, PUT) Transfer done
+2013-08-27 01:14:03,780+0000 INFO RequestHandler Handler(tag: 3148, PUT) unregistering (send)
+2013-08-27 01:14:03,783+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,783+0000 INFO RequestHandler Handler(tag: 3155, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,783+0000 INFO RequestHandler Handler(tag: 368, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,783+0000 INFO PutFileHandler Handler(tag: 3156, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/s/runampl-scztedel/wrapper.log
+2013-08-27 01:14:03,783+0000 INFO PutFileHandler Handler(tag: 3156, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-scztedel.info
+2013-08-27 01:14:03,783+0000 INFO PutFileCommand Sending Command(tag: 369, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,783+0000 INFO PutFileCommand Command(tag: 369, PUT) (t) sending data
+2013-08-27 01:14:03,783+0000 INFO PutFileHandler Handler(tag: 3156, PUT) -> 369
+2013-08-27 01:14:03,783+0000 INFO PutFileHandler Handler(tag: 369, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/s/runampl-scztedel/wrapper.log
+2013-08-27 01:14:03,783+0000 INFO PutFileHandler Handler(tag: 369, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-scztedel.info
+2013-08-27 01:14:03,784+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,784+0000 INFO PutFileHandler Handler(tag: 363, PUT) Transfer done
+2013-08-27 01:14:03,784+0000 INFO RequestHandler Handler(tag: 3157, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,784+0000 INFO RequestHandler Handler(tag: 363, PUT) unregistering (send)
+2013-08-27 01:14:03,784+0000 INFO RequestHandler Handler(tag: 370, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,784+0000 INFO PutFileHandler Handler(tag: 3150, PUT) Transfer done
+2013-08-27 01:14:03,784+0000 INFO RequestHandler Handler(tag: 3150, PUT) unregistering (send)
+2013-08-27 01:14:03,784+0000 INFO PutFileHandler Handler(tag: 3158, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/s/runampl-scztedel/wrapper.error
+2013-08-27 01:14:03,784+0000 INFO PutFileHandler Handler(tag: 3158, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-scztedel.error
+2013-08-27 01:14:03,784+0000 INFO PutFileCommand Sending Command(tag: 371, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,784+0000 INFO PutFileCommand Command(tag: 371, PUT) (t) sending data
+2013-08-27 01:14:03,784+0000 INFO PutFileHandler Handler(tag: 3158, PUT) -> 371
+2013-08-27 01:14:03,784+0000 INFO PutFileHandler Handler(tag: 371, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/s/runampl-scztedel/wrapper.error
+2013-08-27 01:14:03,784+0000 INFO PutFileHandler Handler(tag: 371, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-scztedel.error
+2013-08-27 01:14:03,785+0000 INFO PutFileHandler Handler(tag: 365, PUT) Transfer done
+2013-08-27 01:14:03,785+0000 INFO RequestHandler Handler(tag: 365, PUT) unregistering (send)
+2013-08-27 01:14:03,785+0000 INFO PutFileHandler Handler(tag: 3152, PUT) Transfer done
+2013-08-27 01:14:03,785+0000 INFO RequestHandler Handler(tag: 3152, PUT) unregistering (send)
+2013-08-27 01:14:03,786+0000 INFO PutFileHandler Handler(tag: 367, PUT) Transfer done
+2013-08-27 01:14:03,786+0000 INFO RequestHandler Handler(tag: 367, PUT) unregistering (send)
+2013-08-27 01:14:03,786+0000 INFO PutFileHandler Handler(tag: 3154, PUT) Transfer done
+2013-08-27 01:14:03,786+0000 INFO RequestHandler Handler(tag: 3154, PUT) unregistering (send)
+2013-08-27 01:14:03,787+0000 INFO PutFileHandler Handler(tag: 369, PUT) Transfer done
+2013-08-27 01:14:03,787+0000 INFO RequestHandler Handler(tag: 369, PUT) unregistering (send)
+2013-08-27 01:14:03,787+0000 INFO PutFileHandler Handler(tag: 3156, PUT) Transfer done
+2013-08-27 01:14:03,787+0000 INFO RequestHandler Handler(tag: 3156, PUT) unregistering (send)
+2013-08-27 01:14:03,788+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:03,788+0000 INFO Cpu 0827-1301520-000000:6 jobTerminated
+2013-08-27 01:14:03,788+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=6
+2013-08-27 01:14:03,788+0000 INFO RequestHandler Handler(tag: 3159, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,788+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=6 Cpus sleeping: 1
+2013-08-27 01:14:03,788+0000 DEBUG Cpu 0827-1301520-000000:6 sleeping
+2013-08-27 01:14:03,788+0000 INFO PutFileHandler Handler(tag: 371, PUT) Transfer done
+2013-08-27 01:14:03,788+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:03,788+0000 INFO RequestHandler Handler(tag: 371, PUT) unregistering (send)
+2013-08-27 01:14:03,788+0000 INFO Cpu 0827-1301520-000000:7 jobTerminated
+2013-08-27 01:14:03,788+0000 INFO PutFileHandler Handler(tag: 3158, PUT) Transfer done
+2013-08-27 01:14:03,788+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=7
+2013-08-27 01:14:03,788+0000 INFO RequestHandler Handler(tag: 3158, PUT) unregistering (send)
+2013-08-27 01:14:03,789+0000 INFO RequestHandler Handler(tag: 3160, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,789+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=7 Cpus sleeping: 2
+2013-08-27 01:14:03,789+0000 DEBUG Cpu 0827-1301520-000000:7 sleeping
+2013-08-27 01:14:03,789+0000 INFO RequestHandler Handler(tag: 372, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,789+0000 INFO RequestHandler Handler(tag: 373, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,789+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:03,789+0000 INFO Cpu 0827-1301520-000000:5 jobTerminated
+2013-08-27 01:14:03,789+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=5
+2013-08-27 01:14:03,789+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=5 Cpus sleeping: 3
+2013-08-27 01:14:03,789+0000 INFO RequestHandler Handler(tag: 3161, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,789+0000 DEBUG Cpu 0827-1301520-000000:5 sleeping
+2013-08-27 01:14:03,789+0000 INFO RequestHandler Handler(tag: 374, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,790+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:03,791+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:03,791+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:03,791+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-5cztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:03,791+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-pcztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:03,792+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-scztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:03,793+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-2dztedel thread=R-42-0-1x2-20-0 host=midway replicationGroup=null
+2013-08-27 01:14:03,793+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-3dztedel thread=R-42-0-1x2-18-0 host=midway replicationGroup=null
+2013-08-27 01:14:03,793+0000 DEBUG swift JOB_START jobid=runampl-2dztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0020.out, outdir/xhat_l20000_0001.0020.out, obj_outdir/obj_out_l0000_0001.0020.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0020.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/2/runampl-2dztedel host=midway
+2013-08-27 01:14:03,793+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-4dztedel thread=R-42-0-1x3-0 host=midway replicationGroup=null
+2013-08-27 01:14:03,793+0000 DEBUG swift JOB_START jobid=runampl-3dztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0018.out, outdir/xhat_l20000_0001.0018.out, obj_outdir/obj_out_l0000_0001.0018.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0018.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/3/runampl-3dztedel host=midway
+2013-08-27 01:14:03,793+0000 DEBUG swift JOB_START jobid=runampl-4dztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0001.out, outdir/xhat_l20000_0001.0001.out, obj_outdir/obj_out_l0000_0001.0001.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0001.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/4/runampl-4dztedel host=midway
+2013-08-27 01:14:03,795+0000 INFO RequestHandler Handler(tag: 34, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:03,795+0000 INFO RequestHandler Handler(tag: 35, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:03,796+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,796+0000 INFO RequestHandler Handler(tag: 3162, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,796+0000 INFO RequestHandler Handler(tag: 375, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,796+0000 INFO PutFileHandler Handler(tag: 3163, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/b/runampl-bcztedel/wrapper.error
+2013-08-27 01:14:03,796+0000 INFO PutFileHandler Handler(tag: 3163, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-bcztedel.error
+2013-08-27 01:14:03,796+0000 INFO PutFileCommand Sending Command(tag: 376, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,796+0000 INFO PutFileCommand Command(tag: 376, PUT) (t) sending data
+2013-08-27 01:14:03,796+0000 INFO PutFileHandler Handler(tag: 3163, PUT) -> 376
+2013-08-27 01:14:03,796+0000 INFO PutFileHandler Handler(tag: 376, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/b/runampl-bcztedel/wrapper.error
+2013-08-27 01:14:03,796+0000 INFO PutFileHandler Handler(tag: 376, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-bcztedel.error
+2013-08-27 01:14:03,796+0000 INFO RequestHandler Handler(tag: 36, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:03,796+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,796+0000 INFO RequestHandler Handler(tag: 377, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,796+0000 INFO RequestHandler Handler(tag: 3164, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,796+0000 INFO PutFileHandler Handler(tag: 3165, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/b/runampl-bcztedel/wrapper.log
+2013-08-27 01:14:03,796+0000 INFO PutFileHandler Handler(tag: 3165, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-bcztedel.info
+2013-08-27 01:14:03,796+0000 INFO PutFileCommand Sending Command(tag: 378, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,797+0000 INFO PutFileCommand Command(tag: 378, PUT) (t) sending data
+2013-08-27 01:14:03,797+0000 INFO PutFileHandler Handler(tag: 3165, PUT) -> 378
+2013-08-27 01:14:03,797+0000 INFO PutFileHandler Handler(tag: 378, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/b/runampl-bcztedel/wrapper.log
+2013-08-27 01:14:03,797+0000 INFO PutFileHandler Handler(tag: 378, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-bcztedel.info
+2013-08-27 01:14:03,797+0000 INFO PutFileHandler Handler(tag: 376, PUT) Transfer done
+2013-08-27 01:14:03,797+0000 INFO RequestHandler Handler(tag: 376, PUT) unregistering (send)
+2013-08-27 01:14:03,797+0000 INFO PutFileHandler Handler(tag: 3163, PUT) Transfer done
+2013-08-27 01:14:03,797+0000 INFO RequestHandler Handler(tag: 3163, PUT) unregistering (send)
+2013-08-27 01:14:03,798+0000 INFO PutFileHandler Handler(tag: 378, PUT) Transfer done
+2013-08-27 01:14:03,799+0000 INFO RequestHandler Handler(tag: 378, PUT) unregistering (send)
+2013-08-27 01:14:03,799+0000 INFO PutFileHandler Handler(tag: 3165, PUT) Transfer done
+2013-08-27 01:14:03,799+0000 INFO RequestHandler Handler(tag: 3165, PUT) unregistering (send)
+2013-08-27 01:14:03,801+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:03,801+0000 INFO Cpu 0827-1301520-000000:2 jobTerminated
+2013-08-27 01:14:03,801+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=2
+2013-08-27 01:14:03,801+0000 INFO RequestHandler Handler(tag: 3166, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,801+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=2 Cpus sleeping: 4
+2013-08-27 01:14:03,801+0000 INFO Cpu 0827-1301520-000000:2 (quality: 0.5) submitting urn:1377566032080-1377566032083-1377566032084: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0001.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0001.out|outdir/xhat_l10000_000
1.0001.out|outdir/xhat_l20000_0001.0001.out|Results/ampl_res_l0000_0001.0001.out|outdir/out_l0000_0001.0001.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0001.out outdir/xhat_l20000_0001.0001.out obj_outdir/obj_out_l0000_0001.0001.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0001.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,801+0000 INFO RequestHandler Handler(tag: 379, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,801+0000 INFO RequestHandler Handler(tag: 380, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,801+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=5 Cpus sleeping: 1
+2013-08-27 01:14:03,801+0000 INFO Cpu 0827-1301520-000000:5 (quality: 0.5) submitting urn:1377566032081-1377566032086-1377566032087: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0018.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0018.out|outdir/xhat_l10000_000
1.0018.out|outdir/xhat_l20000_0001.0018.out|Results/ampl_res_l0000_0001.0018.out|outdir/out_l0000_0001.0018.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0018.out outdir/xhat_l20000_0001.0018.out obj_outdir/obj_out_l0000_0001.0018.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0018.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,802+0000 INFO RequestHandler Handler(tag: 381, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,802+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=6 Cpus sleeping: 1
+2013-08-27 01:14:03,802+0000 INFO Cpu 0827-1301520-000000:6 (quality: 0.5) submitting urn:1377566032079-1377566032089-1377566032090: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0020.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0020.out|outdir/xhat_l10000_000
1.0020.out|outdir/xhat_l20000_0001.0020.out|Results/ampl_res_l0000_0001.0020.out|outdir/out_l0000_0001.0020.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0020.out outdir/xhat_l20000_0001.0020.out obj_outdir/obj_out_l0000_0001.0020.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0020.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,802+0000 INFO RequestHandler Handler(tag: 382, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,802+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=7 Cpus sleeping: 1
+2013-08-27 01:14:03,802+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:03,802+0000 DEBUG Cpu 0827-1301520-000000:7 sleeping
+2013-08-27 01:14:03,803+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-bcztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:03,803+0000 INFO RequestHandler Handler(tag: 383, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,803+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:03,803+0000 INFO RequestHandler Handler(tag: 3167, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,803+0000 INFO RequestHandler Handler(tag: 384, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,803+0000 INFO GetFileHandler Handler(tag: 3168, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:03,803+0000 INFO GetFileHandler Handler(tag: 3168, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:03,803+0000 INFO GetFileHandler Handler(tag: 3168, GET) -> 385
+2013-08-27 01:14:03,804+0000 INFO GetFileHandler Handler(tag: 385, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:03,804+0000 INFO GetFileHandler Handler(tag: 385, GET) reader: LR-Handler(tag: 385, GET)
+2013-08-27 01:14:03,804+0000 INFO GetFileHandler Handler(tag: 385, GET) sending length: 1925, 60241307
+2013-08-27 01:14:03,804+0000 INFO ReadBuffer RB-LR-Handler(tag: 385, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:03,804+0000 INFO GetFileHandler Handler(tag: 3168, GET) sending length: 1925, 1010849012
+2013-08-27 01:14:03,804+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-5dztedel thread=R-42-0-1-0-3-0 host=midway replicationGroup=null
+2013-08-27 01:14:03,804+0000 INFO ReadBuffer RB-LR-Handler(tag: 385, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,804+0000 INFO LocalIOProvider LR-Handler(tag: 385, GET) rbuf: RB-LR-Handler(tag: 385, GET)
+2013-08-27 01:14:03,804+0000 INFO GetFileHandler Handler(tag: 385, GET) unregistering (last)
+2013-08-27 01:14:03,804+0000 INFO ReadBuffer RB-LR-Handler(tag: 385, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,804+0000 INFO GetFileHandler Handler(tag: 3168, GET) unregistering (last)
+2013-08-27 01:14:03,804+0000 DEBUG swift JOB_START jobid=runampl-5dztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0003.out, outdir/xhat_l20000_0000.0003.out, obj_outdir/obj_out_l0000_0000.0003.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0003.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/5/runampl-5dztedel host=midway
+2013-08-27 01:14:03,804+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,804+0000 INFO RequestHandler Handler(tag: 3169, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,804+0000 INFO RequestHandler Handler(tag: 386, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,804+0000 INFO PutFileHandler Handler(tag: 3170, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/k/runampl-kcztedel/wrapper.error
+2013-08-27 01:14:03,804+0000 INFO PutFileHandler Handler(tag: 3170, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-kcztedel.error
+2013-08-27 01:14:03,804+0000 INFO PutFileCommand Sending Command(tag: 387, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,804+0000 INFO PutFileCommand Command(tag: 387, PUT) (t) sending data
+2013-08-27 01:14:03,804+0000 INFO PutFileHandler Handler(tag: 3170, PUT) -> 387
+2013-08-27 01:14:03,804+0000 INFO PutFileHandler Handler(tag: 387, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/k/runampl-kcztedel/wrapper.error
+2013-08-27 01:14:03,804+0000 INFO PutFileHandler Handler(tag: 387, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-kcztedel.error
+2013-08-27 01:14:03,805+0000 INFO RequestHandler Handler(tag: 388, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,805+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:03,805+0000 INFO RequestHandler Handler(tag: 3171, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,805+0000 INFO RequestHandler Handler(tag: 389, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,805+0000 INFO GetFileHandler Handler(tag: 3172, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:03,805+0000 INFO GetFileHandler Handler(tag: 3172, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:03,805+0000 INFO GetFileHandler Handler(tag: 3172, GET) -> 390
+2013-08-27 01:14:03,805+0000 INFO GetFileHandler Handler(tag: 390, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:03,805+0000 INFO GetFileHandler Handler(tag: 390, GET) reader: LR-Handler(tag: 390, GET)
+2013-08-27 01:14:03,805+0000 INFO GetFileHandler Handler(tag: 390, GET) sending length: 1925, 280400968
+2013-08-27 01:14:03,805+0000 INFO ReadBuffer RB-LR-Handler(tag: 390, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:03,805+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,805+0000 INFO ReadBuffer RB-LR-Handler(tag: 390, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,805+0000 INFO LocalIOProvider LR-Handler(tag: 390, GET) rbuf: RB-LR-Handler(tag: 390, GET)
+2013-08-27 01:14:03,805+0000 INFO RequestHandler Handler(tag: 3173, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,805+0000 INFO GetFileHandler Handler(tag: 390, GET) unregistering (last)
+2013-08-27 01:14:03,805+0000 INFO ReadBuffer RB-LR-Handler(tag: 390, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,805+0000 INFO RequestHandler Handler(tag: 391, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,805+0000 INFO PutFileHandler Handler(tag: 3174, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/k/runampl-kcztedel/wrapper.log
+2013-08-27 01:14:03,805+0000 INFO PutFileHandler Handler(tag: 3174, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-kcztedel.info
+2013-08-27 01:14:03,806+0000 INFO PutFileCommand Sending Command(tag: 392, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,806+0000 INFO PutFileCommand Command(tag: 392, PUT) (t) sending data
+2013-08-27 01:14:03,806+0000 INFO PutFileHandler Handler(tag: 3174, PUT) -> 392
+2013-08-27 01:14:03,806+0000 INFO PutFileHandler Handler(tag: 392, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/k/runampl-kcztedel/wrapper.log
+2013-08-27 01:14:03,806+0000 INFO PutFileHandler Handler(tag: 392, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-kcztedel.info
+2013-08-27 01:14:03,806+0000 INFO RequestHandler Handler(tag: 37, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:03,806+0000 INFO GetFileHandler Handler(tag: 3172, GET) sending length: 1925, 1715600847
+2013-08-27 01:14:03,806+0000 INFO PutFileHandler Handler(tag: 387, PUT) Transfer done
+2013-08-27 01:14:03,806+0000 INFO RequestHandler Handler(tag: 387, PUT) unregistering (send)
+2013-08-27 01:14:03,806+0000 INFO PutFileHandler Handler(tag: 3170, PUT) Transfer done
+2013-08-27 01:14:03,806+0000 INFO RequestHandler Handler(tag: 3170, PUT) unregistering (send)
+2013-08-27 01:14:03,807+0000 INFO GetFileHandler Handler(tag: 3172, GET) unregistering (last)
+2013-08-27 01:14:03,807+0000 INFO PutFileHandler Handler(tag: 392, PUT) Transfer done
+2013-08-27 01:14:03,807+0000 INFO RequestHandler Handler(tag: 392, PUT) unregistering (send)
+2013-08-27 01:14:03,807+0000 INFO PutFileHandler Handler(tag: 3174, PUT) Transfer done
+2013-08-27 01:14:03,807+0000 INFO RequestHandler Handler(tag: 3174, PUT) unregistering (send)
+2013-08-27 01:14:03,811+0000 INFO RequestHandler Handler(tag: 393, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,811+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:03,811+0000 INFO RequestHandler Handler(tag: 3175, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,811+0000 INFO RequestHandler Handler(tag: 394, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,811+0000 INFO GetFileHandler Handler(tag: 3176, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:03,811+0000 INFO GetFileHandler Handler(tag: 3176, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:03,811+0000 INFO GetFileHandler Handler(tag: 3176, GET) -> 395
+2013-08-27 01:14:03,811+0000 INFO GetFileHandler Handler(tag: 395, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:03,811+0000 INFO GetFileHandler Handler(tag: 395, GET) reader: LR-Handler(tag: 395, GET)
+2013-08-27 01:14:03,811+0000 INFO GetFileHandler Handler(tag: 395, GET) sending length: 1925, 2078468944
+2013-08-27 01:14:03,811+0000 INFO GetFileHandler Handler(tag: 3176, GET) sending length: 1925, 1858539706
+2013-08-27 01:14:03,811+0000 INFO ReadBuffer RB-LR-Handler(tag: 395, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:03,811+0000 INFO ReadBuffer RB-LR-Handler(tag: 395, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,811+0000 INFO LocalIOProvider LR-Handler(tag: 395, GET) rbuf: RB-LR-Handler(tag: 395, GET)
+2013-08-27 01:14:03,811+0000 INFO GetFileHandler Handler(tag: 395, GET) unregistering (last)
+2013-08-27 01:14:03,812+0000 INFO ReadBuffer RB-LR-Handler(tag: 395, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,812+0000 INFO GetFileHandler Handler(tag: 3176, GET) unregistering (last)
+2013-08-27 01:14:03,812+0000 INFO GetFileHandler Handler(tag: 3177, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:03,812+0000 INFO GetFileHandler Handler(tag: 3177, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:03,812+0000 INFO GetFileHandler Handler(tag: 3177, GET) -> 396
+2013-08-27 01:14:03,812+0000 INFO GetFileHandler Handler(tag: 396, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:03,812+0000 INFO GetFileHandler Handler(tag: 396, GET) reader: LR-Handler(tag: 396, GET)
+2013-08-27 01:14:03,812+0000 INFO GetFileHandler Handler(tag: 396, GET) sending length: 14799449, 1688878172
+2013-08-27 01:14:03,812+0000 INFO GetFileHandler Handler(tag: 3177, GET) sending length: 14799449, 1684074405
+2013-08-27 01:14:03,812+0000 INFO ReadBuffer RB-LR-Handler(tag: 396, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:03,812+0000 INFO ReadBuffer RB-LR-Handler(tag: 396, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:03,812+0000 INFO LocalIOProvider LR-Handler(tag: 396, GET) rbuf: RB-LR-Handler(tag: 396, GET)
+2013-08-27 01:14:03,812+0000 INFO GetFileHandler Handler(tag: 3178, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:03,812+0000 INFO GetFileHandler Handler(tag: 3178, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:03,812+0000 INFO GetFileHandler Handler(tag: 3178, GET) -> 397
+2013-08-27 01:14:03,812+0000 INFO GetFileHandler Handler(tag: 397, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:03,812+0000 INFO GetFileHandler Handler(tag: 397, GET) reader: LR-Handler(tag: 397, GET)
+2013-08-27 01:14:03,812+0000 INFO GetFileHandler Handler(tag: 397, GET) sending length: 14799449, 128557122
+2013-08-27 01:14:03,812+0000 INFO ReadBuffer RB-LR-Handler(tag: 397, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:03,812+0000 INFO GetFileHandler Handler(tag: 3178, GET) sending length: 14799449, 291000572
+2013-08-27 01:14:03,812+0000 INFO ReadBuffer RB-LR-Handler(tag: 397, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:03,812+0000 INFO LocalIOProvider LR-Handler(tag: 397, GET) rbuf: RB-LR-Handler(tag: 397, GET)
+2013-08-27 01:14:03,813+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:03,813+0000 INFO Cpu 0827-1301520-000000:4 jobTerminated
+2013-08-27 01:14:03,813+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=4
+2013-08-27 01:14:03,813+0000 INFO RequestHandler Handler(tag: 3179, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,813+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=4 Cpus sleeping: 2
+2013-08-27 01:14:03,813+0000 INFO Cpu 0827-1301520-000000:4 (quality: 0.5) submitting urn:1377566032095-1377566032097-1377566032098: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0000.0003.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0000.0003.out|outdir/xhat_l10000_000
0.0003.out|outdir/xhat_l20000_0000.0003.out|Results/ampl_res_l0000_0000.0003.out|outdir/out_l0000_0000.0003.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0003.out outdir/xhat_l20000_0000.0003.out obj_outdir/obj_out_l0000_0000.0003.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0003.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,813+0000 INFO GetFileHandler Handler(tag: 3180, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:03,813+0000 INFO RequestHandler Handler(tag: 398, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,813+0000 INFO GetFileHandler Handler(tag: 3180, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:03,813+0000 INFO GetFileHandler Handler(tag: 3180, GET) -> 400
+2013-08-27 01:14:03,813+0000 INFO RequestHandler Handler(tag: 399, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,813+0000 INFO GetFileHandler Handler(tag: 400, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:03,813+0000 INFO GetFileHandler Handler(tag: 400, GET) reader: LR-Handler(tag: 400, GET)
+2013-08-27 01:14:03,813+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=7 Cpus sleeping: 1
+2013-08-27 01:14:03,813+0000 INFO GetFileHandler Handler(tag: 400, GET) sending length: 14799449, 1001004128
+2013-08-27 01:14:03,813+0000 DEBUG Cpu 0827-1301520-000000:7 sleeping
+2013-08-27 01:14:03,813+0000 INFO GetFileHandler Handler(tag: 3180, GET) sending length: 14799449, 489488698
+2013-08-27 01:14:03,813+0000 INFO ReadBuffer RB-LR-Handler(tag: 400, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:03,813+0000 INFO ReadBuffer RB-LR-Handler(tag: 400, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:03,813+0000 INFO LocalIOProvider LR-Handler(tag: 400, GET) rbuf: RB-LR-Handler(tag: 400, GET)
+2013-08-27 01:14:03,814+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:03,815+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-kcztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:03,816+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-6dztedel thread=R-42-0-1x2-8-0 host=midway replicationGroup=null
+2013-08-27 01:14:03,816+0000 DEBUG swift JOB_START jobid=runampl-6dztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0008.out, outdir/xhat_l20000_0001.0008.out, obj_outdir/obj_out_l0000_0001.0008.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0008.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/6/runampl-6dztedel host=midway
+2013-08-27 01:14:03,818+0000 INFO RequestHandler Handler(tag: 38, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:03,824+0000 INFO RequestHandler Handler(tag: 401, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,824+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:03,824+0000 INFO RequestHandler Handler(tag: 3181, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,824+0000 INFO RequestHandler Handler(tag: 402, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,824+0000 INFO GetFileHandler Handler(tag: 3182, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:03,824+0000 INFO GetFileHandler Handler(tag: 3182, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:03,825+0000 INFO GetFileHandler Handler(tag: 3182, GET) -> 403
+2013-08-27 01:14:03,825+0000 INFO GetFileHandler Handler(tag: 403, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:03,825+0000 INFO GetFileHandler Handler(tag: 403, GET) reader: LR-Handler(tag: 403, GET)
+2013-08-27 01:14:03,825+0000 INFO GetFileHandler Handler(tag: 403, GET) sending length: 1925, 376821660
+2013-08-27 01:14:03,825+0000 INFO ReadBuffer RB-LR-Handler(tag: 403, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:03,825+0000 INFO ReadBuffer RB-LR-Handler(tag: 403, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:03,825+0000 INFO LocalIOProvider LR-Handler(tag: 403, GET) rbuf: RB-LR-Handler(tag: 403, GET)
+2013-08-27 01:14:03,825+0000 INFO GetFileHandler Handler(tag: 403, GET) unregistering (last)
+2013-08-27 01:14:03,825+0000 INFO ReadBuffer RB-LR-Handler(tag: 403, GET) de-allocating 1 buffers
+2013-08-27 01:14:03,825+0000 INFO GetFileHandler Handler(tag: 3182, GET) sending length: 1925, 1462084651
+2013-08-27 01:14:03,825+0000 INFO GetFileHandler Handler(tag: 3182, GET) unregistering (last)
+2013-08-27 01:14:03,834+0000 INFO ProxyIOProvider Command(tag: 396, GET) suspending
+2013-08-27 01:14:03,834+0000 INFO GetFileHandler Handler(tag: 396, GET) suspending
+2013-08-27 01:14:03,834+0000 INFO ProxyIOProvider Command(tag: 397, GET) suspending
+2013-08-27 01:14:03,834+0000 INFO GetFileHandler Handler(tag: 397, GET) suspending
+2013-08-27 01:14:03,834+0000 INFO ProxyIOProvider Command(tag: 400, GET) suspending
+2013-08-27 01:14:03,834+0000 INFO GetFileHandler Handler(tag: 400, GET) suspending
+2013-08-27 01:14:03,834+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,834+0000 INFO RequestHandler Handler(tag: 3183, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,834+0000 INFO RequestHandler Handler(tag: 404, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,834+0000 INFO PutFileHandler Handler(tag: 3184, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/m/runampl-mcztedel/wrapper.error
+2013-08-27 01:14:03,834+0000 INFO PutFileHandler Handler(tag: 3184, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-mcztedel.error
+2013-08-27 01:14:03,835+0000 INFO PutFileCommand Sending Command(tag: 405, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,835+0000 INFO PutFileCommand Command(tag: 405, PUT) (t) sending data
+2013-08-27 01:14:03,835+0000 INFO PutFileHandler Handler(tag: 3184, PUT) -> 405
+2013-08-27 01:14:03,835+0000 INFO PutFileHandler Handler(tag: 405, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/m/runampl-mcztedel/wrapper.error
+2013-08-27 01:14:03,835+0000 INFO PutFileHandler Handler(tag: 405, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-mcztedel.error
+2013-08-27 01:14:03,835+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,835+0000 INFO RequestHandler Handler(tag: 3185, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,835+0000 INFO RequestHandler Handler(tag: 406, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,835+0000 INFO PutFileHandler Handler(tag: 3186, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/m/runampl-mcztedel/wrapper.log
+2013-08-27 01:14:03,835+0000 INFO PutFileHandler Handler(tag: 3186, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-mcztedel.info
+2013-08-27 01:14:03,835+0000 INFO PutFileCommand Sending Command(tag: 407, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,835+0000 INFO PutFileCommand Command(tag: 407, PUT) (t) sending data
+2013-08-27 01:14:03,835+0000 INFO PutFileHandler Handler(tag: 3186, PUT) -> 407
+2013-08-27 01:14:03,835+0000 INFO PutFileHandler Handler(tag: 407, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/m/runampl-mcztedel/wrapper.log
+2013-08-27 01:14:03,835+0000 INFO PutFileHandler Handler(tag: 407, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-mcztedel.info
+2013-08-27 01:14:03,836+0000 INFO PutFileHandler Handler(tag: 405, PUT) Transfer done
+2013-08-27 01:14:03,836+0000 INFO RequestHandler Handler(tag: 405, PUT) unregistering (send)
+2013-08-27 01:14:03,836+0000 INFO PutFileHandler Handler(tag: 3184, PUT) Transfer done
+2013-08-27 01:14:03,836+0000 INFO RequestHandler Handler(tag: 3184, PUT) unregistering (send)
+2013-08-27 01:14:03,837+0000 INFO PutFileHandler Handler(tag: 407, PUT) Transfer done
+2013-08-27 01:14:03,837+0000 INFO RequestHandler Handler(tag: 407, PUT) unregistering (send)
+2013-08-27 01:14:03,837+0000 INFO PutFileHandler Handler(tag: 3186, PUT) Transfer done
+2013-08-27 01:14:03,837+0000 INFO RequestHandler Handler(tag: 3186, PUT) unregistering (send)
+2013-08-27 01:14:03,863+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=7 Cpus sleeping: 1
+2013-08-27 01:14:03,863+0000 INFO Cpu 0827-1301520-000000:7 (quality: 0.5) submitting urn:1377566032103-1377566032105-1377566032106: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0008.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0008.out|outdir/xhat_l10000_000
1.0008.out|outdir/xhat_l20000_0001.0008.out|Results/ampl_res_l0000_0001.0008.out|outdir/out_l0000_0001.0008.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0008.out outdir/xhat_l20000_0001.0008.out obj_outdir/obj_out_l0000_0001.0008.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0008.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:03,864+0000 INFO RequestHandler Handler(tag: 408, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,864+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,864+0000 INFO RequestHandler Handler(tag: 3187, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,864+0000 INFO RequestHandler Handler(tag: 409, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,864+0000 INFO PutFileHandler Handler(tag: 3188, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/x/runampl-xcztedel/wrapper.log
+2013-08-27 01:14:03,864+0000 INFO PutFileHandler Handler(tag: 3188, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-xcztedel.info
+2013-08-27 01:14:03,864+0000 INFO PutFileCommand Sending Command(tag: 410, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,864+0000 INFO PutFileCommand Command(tag: 410, PUT) (t) sending data
+2013-08-27 01:14:03,864+0000 INFO PutFileHandler Handler(tag: 3188, PUT) -> 410
+2013-08-27 01:14:03,864+0000 INFO PutFileHandler Handler(tag: 410, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/x/runampl-xcztedel/wrapper.log
+2013-08-27 01:14:03,864+0000 INFO PutFileHandler Handler(tag: 410, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-xcztedel.info
+2013-08-27 01:14:03,865+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,865+0000 INFO RequestHandler Handler(tag: 3189, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,865+0000 INFO RequestHandler Handler(tag: 411, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,865+0000 INFO PutFileHandler Handler(tag: 3190, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/x/runampl-xcztedel/wrapper.error
+2013-08-27 01:14:03,865+0000 INFO PutFileHandler Handler(tag: 3190, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-xcztedel.error
+2013-08-27 01:14:03,865+0000 INFO PutFileCommand Sending Command(tag: 412, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,865+0000 INFO PutFileCommand Command(tag: 412, PUT) (t) sending data
+2013-08-27 01:14:03,865+0000 INFO PutFileHandler Handler(tag: 3190, PUT) -> 412
+2013-08-27 01:14:03,865+0000 INFO PutFileHandler Handler(tag: 412, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/x/runampl-xcztedel/wrapper.error
+2013-08-27 01:14:03,865+0000 INFO PutFileHandler Handler(tag: 412, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-xcztedel.error
+2013-08-27 01:14:03,866+0000 INFO PutFileHandler Handler(tag: 410, PUT) Transfer done
+2013-08-27 01:14:03,866+0000 INFO RequestHandler Handler(tag: 410, PUT) unregistering (send)
+2013-08-27 01:14:03,866+0000 INFO PutFileHandler Handler(tag: 3188, PUT) Transfer done
+2013-08-27 01:14:03,866+0000 INFO RequestHandler Handler(tag: 3188, PUT) unregistering (send)
+2013-08-27 01:14:03,866+0000 INFO PutFileHandler Handler(tag: 412, PUT) Transfer done
+2013-08-27 01:14:03,866+0000 INFO RequestHandler Handler(tag: 412, PUT) unregistering (send)
+2013-08-27 01:14:03,866+0000 INFO PutFileHandler Handler(tag: 3190, PUT) Transfer done
+2013-08-27 01:14:03,866+0000 INFO RequestHandler Handler(tag: 3190, PUT) unregistering (send)
+2013-08-27 01:14:03,886+0000 INFO ThrottleManager O maxBuffers=1024, crtBuffers=786, allowedTransfers=0, active=0, suspended=0
+2013-08-27 01:14:03,886+0000 INFO ThrottleManager mem=164.43 MB, heap=399.81 MB, maxHeap=910.25 MB
+2013-08-27 01:14:03,892+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,892+0000 INFO RequestHandler Handler(tag: 3191, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,892+0000 INFO RequestHandler Handler(tag: 413, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,892+0000 INFO PutFileHandler Handler(tag: 3192, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/1/runampl-1dztedel/wrapper.log
+2013-08-27 01:14:03,892+0000 INFO PutFileHandler Handler(tag: 3192, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-1dztedel.info
+2013-08-27 01:14:03,892+0000 INFO PutFileCommand Sending Command(tag: 414, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,892+0000 INFO PutFileCommand Command(tag: 414, PUT) (t) sending data
+2013-08-27 01:14:03,892+0000 INFO PutFileHandler Handler(tag: 3192, PUT) -> 414
+2013-08-27 01:14:03,892+0000 INFO PutFileHandler Handler(tag: 414, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/1/runampl-1dztedel/wrapper.log
+2013-08-27 01:14:03,892+0000 INFO PutFileHandler Handler(tag: 414, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-1dztedel.info
+2013-08-27 01:14:03,893+0000 INFO ThrottleManager I maxBuffers=1024, crtBuffers=25, allowedTransfers=237, active=0, suspended=0
+2013-08-27 01:14:03,893+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,893+0000 INFO RequestHandler Handler(tag: 3193, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,893+0000 INFO RequestHandler Handler(tag: 415, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,893+0000 INFO PutFileHandler Handler(tag: 3194, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/1/runampl-1dztedel/wrapper.error
+2013-08-27 01:14:03,893+0000 INFO PutFileHandler Handler(tag: 3194, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-1dztedel.error
+2013-08-27 01:14:03,893+0000 INFO PutFileCommand Sending Command(tag: 416, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,893+0000 INFO PutFileCommand Command(tag: 416, PUT) (t) sending data
+2013-08-27 01:14:03,893+0000 INFO PutFileHandler Handler(tag: 3194, PUT) -> 416
+2013-08-27 01:14:03,893+0000 INFO PutFileHandler Handler(tag: 416, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/1/runampl-1dztedel/wrapper.error
+2013-08-27 01:14:03,893+0000 INFO PutFileHandler Handler(tag: 416, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-1dztedel.error
+2013-08-27 01:14:03,893+0000 INFO PutFileHandler Handler(tag: 414, PUT) Transfer done
+2013-08-27 01:14:03,893+0000 INFO RequestHandler Handler(tag: 414, PUT) unregistering (send)
+2013-08-27 01:14:03,893+0000 INFO PutFileHandler Handler(tag: 3192, PUT) Transfer done
+2013-08-27 01:14:03,893+0000 INFO RequestHandler Handler(tag: 3192, PUT) unregistering (send)
+2013-08-27 01:14:03,894+0000 INFO PutFileHandler Handler(tag: 416, PUT) Transfer done
+2013-08-27 01:14:03,894+0000 INFO RequestHandler Handler(tag: 416, PUT) unregistering (send)
+2013-08-27 01:14:03,894+0000 INFO PutFileHandler Handler(tag: 3194, PUT) Transfer done
+2013-08-27 01:14:03,894+0000 INFO RequestHandler Handler(tag: 3194, PUT) unregistering (send)
+2013-08-27 01:14:03,922+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,922+0000 INFO RequestHandler Handler(tag: 3195, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,922+0000 INFO RequestHandler Handler(tag: 417, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,922+0000 INFO PutFileHandler Handler(tag: 3196, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/u/runampl-ucztedel/wrapper.error
+2013-08-27 01:14:03,922+0000 INFO PutFileHandler Handler(tag: 3196, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ucztedel.error
+2013-08-27 01:14:03,922+0000 INFO PutFileCommand Sending Command(tag: 418, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,922+0000 INFO PutFileCommand Command(tag: 418, PUT) (t) sending data
+2013-08-27 01:14:03,922+0000 INFO PutFileHandler Handler(tag: 3196, PUT) -> 418
+2013-08-27 01:14:03,922+0000 INFO PutFileHandler Handler(tag: 418, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/u/runampl-ucztedel/wrapper.error
+2013-08-27 01:14:03,922+0000 INFO PutFileHandler Handler(tag: 418, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ucztedel.error
+2013-08-27 01:14:03,922+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,922+0000 INFO RequestHandler Handler(tag: 3197, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,922+0000 INFO RequestHandler Handler(tag: 419, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,922+0000 INFO PutFileHandler Handler(tag: 418, PUT) Transfer done
+2013-08-27 01:14:03,922+0000 INFO RequestHandler Handler(tag: 418, PUT) unregistering (send)
+2013-08-27 01:14:03,922+0000 INFO PutFileHandler Handler(tag: 3198, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/u/runampl-ucztedel/wrapper.log
+2013-08-27 01:14:03,922+0000 INFO PutFileHandler Handler(tag: 3196, PUT) Transfer done
+2013-08-27 01:14:03,922+0000 INFO PutFileHandler Handler(tag: 3198, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ucztedel.info
+2013-08-27 01:14:03,922+0000 INFO RequestHandler Handler(tag: 3196, PUT) unregistering (send)
+2013-08-27 01:14:03,922+0000 INFO PutFileCommand Sending Command(tag: 420, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,922+0000 INFO PutFileCommand Command(tag: 420, PUT) (t) sending data
+2013-08-27 01:14:03,922+0000 INFO PutFileHandler Handler(tag: 3198, PUT) -> 420
+2013-08-27 01:14:03,922+0000 INFO PutFileHandler Handler(tag: 420, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/u/runampl-ucztedel/wrapper.log
+2013-08-27 01:14:03,922+0000 INFO PutFileHandler Handler(tag: 420, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ucztedel.info
+2013-08-27 01:14:03,923+0000 INFO PutFileHandler Handler(tag: 420, PUT) Transfer done
+2013-08-27 01:14:03,923+0000 INFO RequestHandler Handler(tag: 420, PUT) unregistering (send)
+2013-08-27 01:14:03,923+0000 INFO PutFileHandler Handler(tag: 3198, PUT) Transfer done
+2013-08-27 01:14:03,923+0000 INFO RequestHandler Handler(tag: 3198, PUT) unregistering (send)
+2013-08-27 01:14:03,936+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,936+0000 INFO RequestHandler Handler(tag: 3199, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,936+0000 INFO RequestHandler Handler(tag: 421, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,936+0000 INFO PutFileHandler Handler(tag: 3200, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/0/runampl-0dztedel/wrapper.log
+2013-08-27 01:14:03,936+0000 INFO PutFileHandler Handler(tag: 3200, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-0dztedel.info
+2013-08-27 01:14:03,936+0000 INFO PutFileCommand Sending Command(tag: 422, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,936+0000 INFO PutFileCommand Command(tag: 422, PUT) (t) sending data
+2013-08-27 01:14:03,936+0000 INFO PutFileHandler Handler(tag: 422, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/0/runampl-0dztedel/wrapper.log
+2013-08-27 01:14:03,936+0000 INFO PutFileHandler Handler(tag: 3200, PUT) -> 422
+2013-08-27 01:14:03,936+0000 INFO PutFileHandler Handler(tag: 422, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-0dztedel.info
+2013-08-27 01:14:03,936+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,936+0000 INFO RequestHandler Handler(tag: 3201, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,936+0000 INFO RequestHandler Handler(tag: 423, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,936+0000 INFO PutFileHandler Handler(tag: 3202, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/y/runampl-ycztedel/wrapper.error
+2013-08-27 01:14:03,936+0000 INFO PutFileHandler Handler(tag: 3202, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ycztedel.error
+2013-08-27 01:14:03,936+0000 INFO PutFileCommand Sending Command(tag: 424, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,937+0000 INFO PutFileCommand Command(tag: 424, PUT) (t) sending data
+2013-08-27 01:14:03,937+0000 INFO PutFileHandler Handler(tag: 3202, PUT) -> 424
+2013-08-27 01:14:03,937+0000 INFO PutFileHandler Handler(tag: 424, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/y/runampl-ycztedel/wrapper.error
+2013-08-27 01:14:03,937+0000 INFO PutFileHandler Handler(tag: 424, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ycztedel.error
+2013-08-27 01:14:03,937+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,937+0000 INFO RequestHandler Handler(tag: 3203, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,937+0000 INFO PutFileHandler Handler(tag: 424, PUT) Transfer done
+2013-08-27 01:14:03,937+0000 INFO RequestHandler Handler(tag: 425, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,937+0000 INFO RequestHandler Handler(tag: 424, PUT) unregistering (send)
+2013-08-27 01:14:03,937+0000 INFO PutFileHandler Handler(tag: 3202, PUT) Transfer done
+2013-08-27 01:14:03,937+0000 INFO PutFileHandler Handler(tag: 3204, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/c/runampl-ccztedel/wrapper.log
+2013-08-27 01:14:03,937+0000 INFO RequestHandler Handler(tag: 3202, PUT) unregistering (send)
+2013-08-27 01:14:03,937+0000 INFO PutFileHandler Handler(tag: 3204, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ccztedel.info
+2013-08-27 01:14:03,937+0000 INFO PutFileCommand Sending Command(tag: 426, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,937+0000 INFO PutFileCommand Command(tag: 426, PUT) (t) sending data
+2013-08-27 01:14:03,937+0000 INFO PutFileHandler Handler(tag: 3204, PUT) -> 426
+2013-08-27 01:14:03,937+0000 INFO PutFileHandler Handler(tag: 426, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/c/runampl-ccztedel/wrapper.log
+2013-08-27 01:14:03,937+0000 INFO PutFileHandler Handler(tag: 426, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ccztedel.info
+2013-08-27 01:14:03,937+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,937+0000 INFO RequestHandler Handler(tag: 3205, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,937+0000 INFO RequestHandler Handler(tag: 427, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,937+0000 INFO PutFileHandler Handler(tag: 3206, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/i/runampl-icztedel/wrapper.error
+2013-08-27 01:14:03,937+0000 INFO PutFileHandler Handler(tag: 3206, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-icztedel.error
+2013-08-27 01:14:03,937+0000 INFO PutFileCommand Sending Command(tag: 428, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,937+0000 INFO PutFileCommand Command(tag: 428, PUT) (t) sending data
+2013-08-27 01:14:03,937+0000 INFO PutFileHandler Handler(tag: 3206, PUT) -> 428
+2013-08-27 01:14:03,937+0000 INFO PutFileHandler Handler(tag: 428, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/i/runampl-icztedel/wrapper.error
+2013-08-27 01:14:03,937+0000 INFO PutFileHandler Handler(tag: 428, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-icztedel.error
+2013-08-27 01:14:03,938+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,938+0000 INFO RequestHandler Handler(tag: 3207, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,938+0000 INFO PutFileHandler Handler(tag: 428, PUT) Transfer done
+2013-08-27 01:14:03,938+0000 INFO RequestHandler Handler(tag: 429, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,938+0000 INFO RequestHandler Handler(tag: 428, PUT) unregistering (send)
+2013-08-27 01:14:03,938+0000 INFO PutFileHandler Handler(tag: 3206, PUT) Transfer done
+2013-08-27 01:14:03,938+0000 INFO RequestHandler Handler(tag: 3206, PUT) unregistering (send)
+2013-08-27 01:14:03,938+0000 INFO PutFileHandler Handler(tag: 3208, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/z/runampl-zcztedel/wrapper.error
+2013-08-27 01:14:03,938+0000 INFO PutFileHandler Handler(tag: 3208, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-zcztedel.error
+2013-08-27 01:14:03,938+0000 INFO PutFileCommand Sending Command(tag: 430, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,938+0000 INFO PutFileCommand Command(tag: 430, PUT) (t) sending data
+2013-08-27 01:14:03,938+0000 INFO PutFileHandler Handler(tag: 3208, PUT) -> 430
+2013-08-27 01:14:03,938+0000 INFO PutFileHandler Handler(tag: 430, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/z/runampl-zcztedel/wrapper.error
+2013-08-27 01:14:03,938+0000 INFO PutFileHandler Handler(tag: 430, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-zcztedel.error
+2013-08-27 01:14:03,939+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,939+0000 INFO RequestHandler Handler(tag: 3209, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,939+0000 INFO RequestHandler Handler(tag: 431, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,939+0000 INFO PutFileHandler Handler(tag: 3210, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/v/runampl-vcztedel/wrapper.error
+2013-08-27 01:14:03,939+0000 INFO PutFileHandler Handler(tag: 430, PUT) Transfer done
+2013-08-27 01:14:03,939+0000 INFO PutFileHandler Handler(tag: 3210, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-vcztedel.error
+2013-08-27 01:14:03,939+0000 INFO RequestHandler Handler(tag: 430, PUT) unregistering (send)
+2013-08-27 01:14:03,939+0000 INFO PutFileHandler Handler(tag: 3208, PUT) Transfer done
+2013-08-27 01:14:03,939+0000 INFO PutFileCommand Sending Command(tag: 432, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,939+0000 INFO RequestHandler Handler(tag: 3208, PUT) unregistering (send)
+2013-08-27 01:14:03,939+0000 INFO PutFileHandler Handler(tag: 432, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/v/runampl-vcztedel/wrapper.error
+2013-08-27 01:14:03,939+0000 INFO PutFileCommand Command(tag: 432, PUT) (t) sending data
+2013-08-27 01:14:03,939+0000 INFO PutFileHandler Handler(tag: 432, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-vcztedel.error
+2013-08-27 01:14:03,939+0000 INFO PutFileHandler Handler(tag: 3210, PUT) -> 432
+2013-08-27 01:14:03,939+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,939+0000 INFO PutFileHandler Handler(tag: 432, PUT) Transfer done
+2013-08-27 01:14:03,939+0000 INFO RequestHandler Handler(tag: 3211, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,939+0000 INFO RequestHandler Handler(tag: 432, PUT) unregistering (send)
+2013-08-27 01:14:03,939+0000 INFO RequestHandler Handler(tag: 433, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,939+0000 INFO PutFileHandler Handler(tag: 3210, PUT) Transfer done
+2013-08-27 01:14:03,939+0000 INFO RequestHandler Handler(tag: 3210, PUT) unregistering (send)
+2013-08-27 01:14:03,939+0000 INFO PutFileHandler Handler(tag: 3212, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/y/runampl-ycztedel/wrapper.log
+2013-08-27 01:14:03,939+0000 INFO PutFileHandler Handler(tag: 3212, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ycztedel.info
+2013-08-27 01:14:03,939+0000 INFO PutFileCommand Sending Command(tag: 434, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,939+0000 INFO PutFileCommand Command(tag: 434, PUT) (t) sending data
+2013-08-27 01:14:03,939+0000 INFO PutFileHandler Handler(tag: 422, PUT) Transfer done
+2013-08-27 01:14:03,939+0000 INFO PutFileHandler Handler(tag: 3212, PUT) -> 434
+2013-08-27 01:14:03,939+0000 INFO PutFileHandler Handler(tag: 434, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/y/runampl-ycztedel/wrapper.log
+2013-08-27 01:14:03,939+0000 INFO RequestHandler Handler(tag: 422, PUT) unregistering (send)
+2013-08-27 01:14:03,939+0000 INFO PutFileHandler Handler(tag: 434, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ycztedel.info
+2013-08-27 01:14:03,939+0000 INFO PutFileHandler Handler(tag: 3200, PUT) Transfer done
+2013-08-27 01:14:03,939+0000 INFO RequestHandler Handler(tag: 3200, PUT) unregistering (send)
+2013-08-27 01:14:03,940+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,940+0000 INFO RequestHandler Handler(tag: 435, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,940+0000 INFO RequestHandler Handler(tag: 3213, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,940+0000 INFO PutFileHandler Handler(tag: 3214, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/i/runampl-icztedel/wrapper.log
+2013-08-27 01:14:03,940+0000 INFO PutFileHandler Handler(tag: 3214, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-icztedel.info
+2013-08-27 01:14:03,940+0000 INFO PutFileCommand Sending Command(tag: 436, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,940+0000 INFO PutFileCommand Command(tag: 436, PUT) (t) sending data
+2013-08-27 01:14:03,940+0000 INFO PutFileHandler Handler(tag: 3214, PUT) -> 436
+2013-08-27 01:14:03,940+0000 INFO PutFileHandler Handler(tag: 436, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/i/runampl-icztedel/wrapper.log
+2013-08-27 01:14:03,940+0000 INFO PutFileHandler Handler(tag: 436, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-icztedel.info
+2013-08-27 01:14:03,940+0000 INFO PutFileHandler Handler(tag: 426, PUT) Transfer done
+2013-08-27 01:14:03,940+0000 INFO RequestHandler Handler(tag: 426, PUT) unregistering (send)
+2013-08-27 01:14:03,940+0000 INFO PutFileHandler Handler(tag: 3204, PUT) Transfer done
+2013-08-27 01:14:03,940+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,940+0000 INFO RequestHandler Handler(tag: 3204, PUT) unregistering (send)
+2013-08-27 01:14:03,940+0000 INFO RequestHandler Handler(tag: 3215, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,940+0000 INFO RequestHandler Handler(tag: 437, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,940+0000 INFO PutFileHandler Handler(tag: 3216, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/z/runampl-zcztedel/wrapper.log
+2013-08-27 01:14:03,940+0000 INFO PutFileHandler Handler(tag: 3216, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-zcztedel.info
+2013-08-27 01:14:03,940+0000 INFO PutFileCommand Sending Command(tag: 438, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,940+0000 INFO PutFileCommand Command(tag: 438, PUT) (t) sending data
+2013-08-27 01:14:03,940+0000 INFO PutFileHandler Handler(tag: 3216, PUT) -> 438
+2013-08-27 01:14:03,940+0000 INFO PutFileHandler Handler(tag: 438, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/z/runampl-zcztedel/wrapper.log
+2013-08-27 01:14:03,940+0000 INFO PutFileHandler Handler(tag: 438, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-zcztedel.info
+2013-08-27 01:14:03,940+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,940+0000 INFO RequestHandler Handler(tag: 3217, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,940+0000 INFO RequestHandler Handler(tag: 439, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,940+0000 INFO PutFileHandler Handler(tag: 3218, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/v/runampl-vcztedel/wrapper.log
+2013-08-27 01:14:03,940+0000 INFO PutFileHandler Handler(tag: 3218, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-vcztedel.info
+2013-08-27 01:14:03,941+0000 INFO PutFileCommand Sending Command(tag: 440, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,941+0000 INFO PutFileCommand Command(tag: 440, PUT) (t) sending data
+2013-08-27 01:14:03,941+0000 INFO PutFileHandler Handler(tag: 3218, PUT) -> 440
+2013-08-27 01:14:03,941+0000 INFO PutFileHandler Handler(tag: 440, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/v/runampl-vcztedel/wrapper.log
+2013-08-27 01:14:03,941+0000 INFO PutFileHandler Handler(tag: 440, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-vcztedel.info
+2013-08-27 01:14:03,941+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,941+0000 INFO RequestHandler Handler(tag: 3219, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,941+0000 INFO RequestHandler Handler(tag: 441, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,941+0000 INFO PutFileHandler Handler(tag: 3220, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/0/runampl-0dztedel/wrapper.error
+2013-08-27 01:14:03,941+0000 INFO PutFileHandler Handler(tag: 3220, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-0dztedel.error
+2013-08-27 01:14:03,941+0000 INFO PutFileCommand Sending Command(tag: 442, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,941+0000 INFO PutFileCommand Command(tag: 442, PUT) (t) sending data
+2013-08-27 01:14:03,941+0000 INFO PutFileHandler Handler(tag: 3220, PUT) -> 442
+2013-08-27 01:14:03,941+0000 INFO PutFileHandler Handler(tag: 442, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/0/runampl-0dztedel/wrapper.error
+2013-08-27 01:14:03,941+0000 INFO PutFileHandler Handler(tag: 442, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-0dztedel.error
+2013-08-27 01:14:03,941+0000 INFO PutFileHandler Handler(tag: 442, PUT) Transfer done
+2013-08-27 01:14:03,941+0000 INFO RequestHandler Handler(tag: 442, PUT) unregistering (send)
+2013-08-27 01:14:03,941+0000 INFO PutFileHandler Handler(tag: 3220, PUT) Transfer done
+2013-08-27 01:14:03,941+0000 INFO RequestHandler Handler(tag: 3220, PUT) unregistering (send)
+2013-08-27 01:14:03,943+0000 INFO PutFileHandler Handler(tag: 434, PUT) Transfer done
+2013-08-27 01:14:03,943+0000 INFO RequestHandler Handler(tag: 434, PUT) unregistering (send)
+2013-08-27 01:14:03,943+0000 INFO PutFileHandler Handler(tag: 3212, PUT) Transfer done
+2013-08-27 01:14:03,943+0000 INFO RequestHandler Handler(tag: 3212, PUT) unregistering (send)
+2013-08-27 01:14:03,946+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,946+0000 INFO RequestHandler Handler(tag: 3221, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,946+0000 INFO RequestHandler Handler(tag: 443, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,946+0000 INFO PutFileHandler Handler(tag: 3222, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/c/runampl-ccztedel/wrapper.error
+2013-08-27 01:14:03,946+0000 INFO PutFileHandler Handler(tag: 3222, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ccztedel.error
+2013-08-27 01:14:03,946+0000 INFO PutFileCommand Sending Command(tag: 444, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,946+0000 INFO PutFileCommand Command(tag: 444, PUT) (t) sending data
+2013-08-27 01:14:03,946+0000 INFO PutFileHandler Handler(tag: 3222, PUT) -> 444
+2013-08-27 01:14:03,946+0000 INFO PutFileHandler Handler(tag: 444, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/c/runampl-ccztedel/wrapper.error
+2013-08-27 01:14:03,946+0000 INFO PutFileHandler Handler(tag: 444, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ccztedel.error
+2013-08-27 01:14:03,946+0000 INFO PutFileHandler Handler(tag: 444, PUT) Transfer done
+2013-08-27 01:14:03,946+0000 INFO RequestHandler Handler(tag: 444, PUT) unregistering (send)
+2013-08-27 01:14:03,946+0000 INFO PutFileHandler Handler(tag: 3222, PUT) Transfer done
+2013-08-27 01:14:03,946+0000 INFO RequestHandler Handler(tag: 3222, PUT) unregistering (send)
+2013-08-27 01:14:03,949+0000 INFO PutFileHandler Handler(tag: 436, PUT) Transfer done
+2013-08-27 01:14:03,949+0000 INFO RequestHandler Handler(tag: 436, PUT) unregistering (send)
+2013-08-27 01:14:03,949+0000 INFO PutFileHandler Handler(tag: 3214, PUT) Transfer done
+2013-08-27 01:14:03,949+0000 INFO RequestHandler Handler(tag: 3214, PUT) unregistering (send)
+2013-08-27 01:14:03,952+0000 INFO PutFileHandler Handler(tag: 438, PUT) Transfer done
+2013-08-27 01:14:03,952+0000 INFO RequestHandler Handler(tag: 438, PUT) unregistering (send)
+2013-08-27 01:14:03,952+0000 INFO PutFileHandler Handler(tag: 3216, PUT) Transfer done
+2013-08-27 01:14:03,952+0000 INFO RequestHandler Handler(tag: 3216, PUT) unregistering (send)
+2013-08-27 01:14:03,955+0000 INFO PutFileHandler Handler(tag: 440, PUT) Transfer done
+2013-08-27 01:14:03,955+0000 INFO RequestHandler Handler(tag: 440, PUT) unregistering (send)
+2013-08-27 01:14:03,955+0000 INFO PutFileHandler Handler(tag: 3218, PUT) Transfer done
+2013-08-27 01:14:03,955+0000 INFO RequestHandler Handler(tag: 3218, PUT) unregistering (send)
+2013-08-27 01:14:03,958+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,958+0000 INFO RequestHandler Handler(tag: 3223, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,958+0000 INFO RequestHandler Handler(tag: 445, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,958+0000 INFO PutFileHandler Handler(tag: 3224, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/t/runampl-tcztedel/wrapper.log
+2013-08-27 01:14:03,958+0000 INFO PutFileHandler Handler(tag: 3224, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-tcztedel.info
+2013-08-27 01:14:03,958+0000 INFO PutFileCommand Sending Command(tag: 446, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,958+0000 INFO PutFileCommand Command(tag: 446, PUT) (t) sending data
+2013-08-27 01:14:03,958+0000 INFO PutFileHandler Handler(tag: 3224, PUT) -> 446
+2013-08-27 01:14:03,958+0000 INFO PutFileHandler Handler(tag: 446, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/t/runampl-tcztedel/wrapper.log
+2013-08-27 01:14:03,958+0000 INFO PutFileHandler Handler(tag: 446, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-tcztedel.info
+2013-08-27 01:14:03,959+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:03,959+0000 INFO RequestHandler Handler(tag: 3225, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,959+0000 INFO RequestHandler Handler(tag: 447, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:03,959+0000 INFO PutFileHandler Handler(tag: 446, PUT) Transfer done
+2013-08-27 01:14:03,959+0000 INFO RequestHandler Handler(tag: 446, PUT) unregistering (send)
+2013-08-27 01:14:03,959+0000 INFO PutFileHandler Handler(tag: 3224, PUT) Transfer done
+2013-08-27 01:14:03,959+0000 INFO PutFileHandler Handler(tag: 3226, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/t/runampl-tcztedel/wrapper.error
+2013-08-27 01:14:03,959+0000 INFO RequestHandler Handler(tag: 3224, PUT) unregistering (send)
+2013-08-27 01:14:03,959+0000 INFO PutFileHandler Handler(tag: 3226, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-tcztedel.error
+2013-08-27 01:14:03,959+0000 INFO PutFileCommand Sending Command(tag: 448, PUT) (t) on cpipe://1
+2013-08-27 01:14:03,959+0000 INFO PutFileCommand Command(tag: 448, PUT) (t) sending data
+2013-08-27 01:14:03,959+0000 INFO PutFileHandler Handler(tag: 3226, PUT) -> 448
+2013-08-27 01:14:03,959+0000 INFO PutFileHandler Handler(tag: 448, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/t/runampl-tcztedel/wrapper.error
+2013-08-27 01:14:03,959+0000 INFO PutFileHandler Handler(tag: 448, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-tcztedel.error
+2013-08-27 01:14:03,959+0000 INFO PutFileHandler Handler(tag: 448, PUT) Transfer done
+2013-08-27 01:14:03,959+0000 INFO RequestHandler Handler(tag: 448, PUT) unregistering (send)
+2013-08-27 01:14:03,959+0000 INFO PutFileHandler Handler(tag: 3226, PUT) Transfer done
+2013-08-27 01:14:03,959+0000 INFO RequestHandler Handler(tag: 3226, PUT) unregistering (send)
+2013-08-27 01:14:04,010+0000 INFO RuntimeStats$ProgressTicker Stage in:4 Submitted:1 Active:16 Stage out:11 Failed but can retry:1
+2013-08-27 01:14:04,115+0000 INFO GetFileHandler Handler(tag: 3227, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,115+0000 INFO GetFileHandler Handler(tag: 3227, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,115+0000 INFO GetFileHandler Handler(tag: 3227, GET) -> 449
+2013-08-27 01:14:04,115+0000 INFO GetFileHandler Handler(tag: 449, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,115+0000 INFO GetFileHandler Handler(tag: 449, GET) reader: LR-Handler(tag: 449, GET)
+2013-08-27 01:14:04,115+0000 INFO GetFileHandler Handler(tag: 449, GET) sending length: 14799449, 1664306559
+2013-08-27 01:14:04,115+0000 INFO ReadBuffer RB-LR-Handler(tag: 449, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,115+0000 INFO GetFileHandler Handler(tag: 3227, GET) sending length: 14799449, 1025834938
+2013-08-27 01:14:04,115+0000 INFO ReadBuffer RB-LR-Handler(tag: 449, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,115+0000 INFO LocalIOProvider LR-Handler(tag: 449, GET) rbuf: RB-LR-Handler(tag: 449, GET)
+2013-08-27 01:14:04,120+0000 INFO ProxyIOProvider Command(tag: 449, GET) suspending
+2013-08-27 01:14:04,120+0000 INFO GetFileHandler Handler(tag: 449, GET) suspending
+2013-08-27 01:14:04,167+0000 INFO ProxyIOProvider Command(tag: 397, GET) resuming
+2013-08-27 01:14:04,167+0000 INFO GetFileHandler Handler(tag: 397, GET) resuming
+2013-08-27 01:14:04,168+0000 INFO ProxyIOProvider Command(tag: 396, GET) resuming
+2013-08-27 01:14:04,168+0000 INFO GetFileHandler Handler(tag: 396, GET) resuming
+2013-08-27 01:14:04,168+0000 INFO GetFileHandler Handler(tag: 397, GET) unregistering (last)
+2013-08-27 01:14:04,169+0000 INFO GetFileHandler Handler(tag: 3178, GET) unregistering (last)
+2013-08-27 01:14:04,169+0000 INFO ReadBuffer RB-LR-Handler(tag: 397, GET) de-allocating 8 buffers
+2013-08-27 01:14:04,169+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:04,169+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:04,169+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:04,169+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:04,169+0000 INFO GetFileHandler Handler(tag: 396, GET) unregistering (last)
+2013-08-27 01:14:04,169+0000 INFO ReadBuffer RB-LR-Handler(tag: 396, GET) de-allocating 8 buffers
+2013-08-27 01:14:04,169+0000 INFO GetFileHandler Handler(tag: 3177, GET) unregistering (last)
+2013-08-27 01:14:04,171+0000 INFO ProxyIOProvider Command(tag: 400, GET) resuming
+2013-08-27 01:14:04,171+0000 INFO GetFileHandler Handler(tag: 400, GET) resuming
+2013-08-27 01:14:04,172+0000 INFO GetFileHandler Handler(tag: 400, GET) unregistering (last)
+2013-08-27 01:14:04,172+0000 INFO ReadBuffer RB-LR-Handler(tag: 400, GET) de-allocating 8 buffers
+2013-08-27 01:14:04,173+0000 INFO GetFileHandler Handler(tag: 3180, GET) unregistering (last)
+2013-08-27 01:14:04,246+0000 INFO ProxyIOProvider Command(tag: 449, GET) resuming
+2013-08-27 01:14:04,246+0000 INFO GetFileHandler Handler(tag: 449, GET) resuming
+2013-08-27 01:14:04,249+0000 INFO GetFileHandler Handler(tag: 449, GET) unregistering (last)
+2013-08-27 01:14:04,249+0000 INFO ReadBuffer RB-LR-Handler(tag: 449, GET) de-allocating 8 buffers
+2013-08-27 01:14:04,249+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:04,249+0000 INFO GetFileHandler Handler(tag: 3227, GET) unregistering (last)
+2013-08-27 01:14:04,267+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,267+0000 INFO Cpu 0827-1301520-000000:1 jobTerminated
+2013-08-27 01:14:04,267+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=1
+2013-08-27 01:14:04,267+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=1 Cpus sleeping: 1
+2013-08-27 01:14:04,267+0000 INFO RequestHandler Handler(tag: 3228, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,267+0000 DEBUG Cpu 0827-1301520-000000:1 sleeping
+2013-08-27 01:14:04,267+0000 INFO RequestHandler Handler(tag: 450, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,268+0000 INFO RequestHandler Handler(tag: 451, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,268+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,269+0000 INFO RequestHandler Handler(tag: 3229, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,269+0000 INFO RequestHandler Handler(tag: 452, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,269+0000 INFO GetFileHandler Handler(tag: 3230, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,269+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:04,269+0000 INFO GetFileHandler Handler(tag: 3230, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,269+0000 INFO GetFileHandler Handler(tag: 3230, GET) -> 453
+2013-08-27 01:14:04,269+0000 INFO GetFileHandler Handler(tag: 453, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,269+0000 INFO GetFileHandler Handler(tag: 453, GET) reader: LR-Handler(tag: 453, GET)
+2013-08-27 01:14:04,269+0000 INFO GetFileHandler Handler(tag: 453, GET) sending length: 1925, 1845692530
+2013-08-27 01:14:04,269+0000 INFO GetFileHandler Handler(tag: 3230, GET) sending length: 1925, 153070795
+2013-08-27 01:14:04,269+0000 INFO ReadBuffer RB-LR-Handler(tag: 453, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,269+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,269+0000 INFO ReadBuffer RB-LR-Handler(tag: 453, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,269+0000 INFO Cpu 0827-1301520-000000:11 jobTerminated
+2013-08-27 01:14:04,269+0000 INFO LocalIOProvider LR-Handler(tag: 453, GET) rbuf: RB-LR-Handler(tag: 453, GET)
+2013-08-27 01:14:04,269+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=11
+2013-08-27 01:14:04,269+0000 INFO GetFileHandler Handler(tag: 453, GET) unregistering (last)
+2013-08-27 01:14:04,269+0000 INFO ReadBuffer RB-LR-Handler(tag: 453, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,269+0000 INFO RequestHandler Handler(tag: 3231, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,269+0000 INFO GetFileHandler Handler(tag: 3230, GET) unregistering (last)
+2013-08-27 01:14:04,269+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=11 Cpus sleeping: 2
+2013-08-27 01:14:04,269+0000 DEBUG Cpu 0827-1301520-000000:11 sleeping
+2013-08-27 01:14:04,270+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-mcztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,270+0000 INFO RequestHandler Handler(tag: 454, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,270+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,270+0000 INFO Cpu 0827-1301520-000000:12 jobTerminated
+2013-08-27 01:14:04,270+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=12
+2013-08-27 01:14:04,270+0000 INFO RequestHandler Handler(tag: 3232, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,270+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=12 Cpus sleeping: 3
+2013-08-27 01:14:04,270+0000 DEBUG Cpu 0827-1301520-000000:12 sleeping
+2013-08-27 01:14:04,270+0000 INFO RequestHandler Handler(tag: 455, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,270+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,270+0000 INFO Cpu 0827-1301520-000000:15 jobTerminated
+2013-08-27 01:14:04,270+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=15
+2013-08-27 01:14:04,270+0000 INFO RequestHandler Handler(tag: 3233, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,270+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=15 Cpus sleeping: 4
+2013-08-27 01:14:04,271+0000 DEBUG Cpu 0827-1301520-000000:15 sleeping
+2013-08-27 01:14:04,271+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-7dztedel thread=R-42-0-1-0-2-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,271+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,271+0000 INFO RequestHandler Handler(tag: 456, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,271+0000 INFO Cpu 0827-1301520-000000:14 jobTerminated
+2013-08-27 01:14:04,271+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:04,271+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=14
+2013-08-27 01:14:04,271+0000 DEBUG swift JOB_START jobid=runampl-7dztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0002.out, outdir/xhat_l20000_0000.0002.out, obj_outdir/obj_out_l0000_0000.0002.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0002.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/7/runampl-7dztedel host=midway
+2013-08-27 01:14:04,271+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=14 Cpus sleeping: 5
+2013-08-27 01:14:04,271+0000 DEBUG Cpu 0827-1301520-000000:14 sleeping
+2013-08-27 01:14:04,271+0000 INFO RequestHandler Handler(tag: 3234, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,271+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:04,272+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-1dztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,272+0000 INFO RequestHandler Handler(tag: 457, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,272+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,272+0000 INFO Cpu 0827-1301520-000000:13 jobTerminated
+2013-08-27 01:14:04,272+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=13
+2013-08-27 01:14:04,272+0000 INFO RequestHandler Handler(tag: 3235, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,272+0000 INFO LateBindingScheduler jobs queued: 2
+2013-08-27 01:14:04,273+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=13 Cpus sleeping: 6
+2013-08-27 01:14:04,273+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-xcztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,273+0000 DEBUG Cpu 0827-1301520-000000:13 sleeping
+2013-08-27 01:14:04,274+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,274+0000 INFO Cpu 0827-1301520-000000:0 jobTerminated
+2013-08-27 01:14:04,274+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=0
+2013-08-27 01:14:04,274+0000 INFO RequestHandler Handler(tag: 458, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,274+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-ucztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,274+0000 INFO LateBindingScheduler jobs queued: 2
+2013-08-27 01:14:04,274+0000 INFO RequestHandler Handler(tag: 3236, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,274+0000 INFO RequestHandler Handler(tag: 459, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,274+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-8dztedel thread=R-42-0-1x2-15-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,274+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=0 Cpus sleeping: 7
+2013-08-27 01:14:04,274+0000 DEBUG Cpu 0827-1301520-000000:0 sleeping
+2013-08-27 01:14:04,275+0000 DEBUG swift JOB_START jobid=runampl-8dztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0015.out, outdir/xhat_l20000_0001.0015.out, obj_outdir/obj_out_l0000_0001.0015.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0015.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/8/runampl-8dztedel host=midway
+2013-08-27 01:14:04,275+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,275+0000 INFO Cpu 0827-1301520-000000:3 jobTerminated
+2013-08-27 01:14:04,275+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=3
+2013-08-27 01:14:04,275+0000 INFO RequestHandler Handler(tag: 3237, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,275+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-9dztedel thread=R-42-0-1x2-19-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,275+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=3 Cpus sleeping: 8
+2013-08-27 01:14:04,275+0000 DEBUG Cpu 0827-1301520-000000:3 sleeping
+2013-08-27 01:14:04,275+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-adztedel thread=R-42-0-1x2-6-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,275+0000 INFO RequestHandler Handler(tag: 460, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,275+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,275+0000 DEBUG swift JOB_START jobid=runampl-9dztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0019.out, outdir/xhat_l20000_0001.0019.out, obj_outdir/obj_out_l0000_0001.0019.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0019.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/9/runampl-9dztedel host=midway
+2013-08-27 01:14:04,275+0000 INFO Cpu 0827-1301520-000000:9 jobTerminated
+2013-08-27 01:14:04,275+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=9
+2013-08-27 01:14:04,275+0000 DEBUG swift JOB_START jobid=runampl-adztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0006.out, outdir/xhat_l20000_0001.0006.out, obj_outdir/obj_out_l0000_0001.0006.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0006.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/a/runampl-adztedel host=midway
+2013-08-27 01:14:04,275+0000 INFO RequestHandler Handler(tag: 3238, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,275+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:04,275+0000 INFO RequestHandler Handler(tag: 461, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,276+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,276+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-0dztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,276+0000 INFO Cpu 0827-1301520-000000:8 jobTerminated
+2013-08-27 01:14:04,276+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=8
+2013-08-27 01:14:04,276+0000 INFO RequestHandler Handler(tag: 3239, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,276+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=9 Cpus sleeping: 9
+2013-08-27 01:14:04,276+0000 DEBUG Cpu 0827-1301520-000000:9 sleeping
+2013-08-27 01:14:04,276+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=8 Cpus sleeping: 10
+2013-08-27 01:14:04,276+0000 DEBUG Cpu 0827-1301520-000000:8 sleeping
+2013-08-27 01:14:04,276+0000 INFO RequestHandler Handler(tag: 39, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,276+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-ycztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,276+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,276+0000 INFO LateBindingScheduler jobs queued: 2
+2013-08-27 01:14:04,277+0000 INFO Cpu 0827-1301520-000000:10 jobTerminated
+2013-08-27 01:14:04,277+0000 INFO LateBindingScheduler jobs queued: 3
+2013-08-27 01:14:04,277+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=10
+2013-08-27 01:14:04,277+0000 INFO RequestHandler Handler(tag: 3240, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,277+0000 INFO RequestHandler Handler(tag: 462, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,278+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=10 Cpus sleeping: 11
+2013-08-27 01:14:04,278+0000 INFO Cpu 0827-1301520-000000:10 (quality: 0.5) submitting urn:1377566032121-1377566032128-1377566032129: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0000.0002.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0000.0002.out|outdir/xhat_l10000_00
00.0002.out|outdir/xhat_l20000_0000.0002.out|Results/ampl_res_l0000_0000.0002.out|outdir/out_l0000_0000.0002.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0002.out outdir/xhat_l20000_0000.0002.out obj_outdir/obj_out_l0000_0000.0002.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0002.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,278+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-bdztedel thread=R-42-0-1-0-7-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,278+0000 INFO RequestHandler Handler(tag: 463, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,278+0000 DEBUG swift JOB_START jobid=runampl-bdztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0007.out, outdir/xhat_l20000_0000.0007.out, obj_outdir/obj_out_l0000_0000.0007.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0007.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/b/runampl-bdztedel host=midway
+2013-08-27 01:14:04,278+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-cdztedel thread=R-42-0-1-0-6-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,278+0000 INFO RequestHandler Handler(tag: 464, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,278+0000 INFO LateBindingScheduler jobs queued: 4
+2013-08-27 01:14:04,279+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-icztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,279+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-ccztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,279+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=14 Cpus sleeping: 1
+2013-08-27 01:14:04,279+0000 DEBUG Cpu 0827-1301520-000000:14 sleeping
+2013-08-27 01:14:04,279+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=8 Cpus sleeping: 2
+2013-08-27 01:14:04,279+0000 DEBUG swift JOB_START jobid=runampl-cdztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0006.out, outdir/xhat_l20000_0000.0006.out, obj_outdir/obj_out_l0000_0000.0006.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0006.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/c/runampl-cdztedel host=midway
+2013-08-27 01:14:04,279+0000 DEBUG Cpu 0827-1301520-000000:8 sleeping
+2013-08-27 01:14:04,279+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=3 Cpus sleeping: 3
+2013-08-27 01:14:04,279+0000 DEBUG Cpu 0827-1301520-000000:3 sleeping
+2013-08-27 01:14:04,279+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=11 Cpus sleeping: 4
+2013-08-27 01:14:04,279+0000 DEBUG Cpu 0827-1301520-000000:11 sleeping
+2013-08-27 01:14:04,279+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=13 Cpus sleeping: 5
+2013-08-27 01:14:04,279+0000 DEBUG Cpu 0827-1301520-000000:13 sleeping
+2013-08-27 01:14:04,279+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=0 Cpus sleeping: 6
+2013-08-27 01:14:04,279+0000 DEBUG Cpu 0827-1301520-000000:0 sleeping
+2013-08-27 01:14:04,279+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=12 Cpus sleeping: 7
+2013-08-27 01:14:04,279+0000 DEBUG Cpu 0827-1301520-000000:12 sleeping
+2013-08-27 01:14:04,279+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=9 Cpus sleeping: 8
+2013-08-27 01:14:04,279+0000 DEBUG Cpu 0827-1301520-000000:9 sleeping
+2013-08-27 01:14:04,279+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=1 Cpus sleeping: 9
+2013-08-27 01:14:04,279+0000 DEBUG Cpu 0827-1301520-000000:1 sleeping
+2013-08-27 01:14:04,279+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=15 Cpus sleeping: 10
+2013-08-27 01:14:04,279+0000 DEBUG Cpu 0827-1301520-000000:15 sleeping
+2013-08-27 01:14:04,280+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-zcztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,280+0000 INFO LateBindingScheduler jobs queued: 3
+2013-08-27 01:14:04,280+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:04,280+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-ddztedel thread=R-42-0-1x2-4-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,280+0000 INFO RequestHandler Handler(tag: 40, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,280+0000 DEBUG swift JOB_START jobid=runampl-ddztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0004.out, outdir/xhat_l20000_0001.0004.out, obj_outdir/obj_out_l0000_0001.0004.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0004.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/d/runampl-ddztedel host=midway
+2013-08-27 01:14:04,281+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-vcztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,281+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-edztedel thread=R-42-0-1x2-10-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,281+0000 DEBUG swift JOB_START jobid=runampl-edztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0010.out, outdir/xhat_l20000_0001.0010.out, obj_outdir/obj_out_l0000_0001.0010.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0010.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/e/runampl-edztedel host=midway
+2013-08-27 01:14:04,281+0000 INFO RequestHandler Handler(tag: 41, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,282+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-fdztedel thread=R-42-0-1x2-14-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,282+0000 DEBUG swift JOB_START jobid=runampl-fdztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0014.out, outdir/xhat_l20000_0001.0014.out, obj_outdir/obj_out_l0000_0001.0014.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0014.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/f/runampl-fdztedel host=midway
+2013-08-27 01:14:04,283+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-tcztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,283+0000 INFO RequestHandler Handler(tag: 42, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,283+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-gdztedel thread=R-42-0-1x2-5-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,283+0000 DEBUG swift JOB_START jobid=runampl-gdztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0005.out, outdir/xhat_l20000_0001.0005.out, obj_outdir/obj_out_l0000_0001.0005.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0005.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/g/runampl-gdztedel host=midway
+2013-08-27 01:14:04,283+0000 INFO RequestHandler Handler(tag: 43, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,284+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-hdztedel thread=R-42-0-1-0-5-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,284+0000 DEBUG swift JOB_START jobid=runampl-hdztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0005.out, outdir/xhat_l20000_0000.0005.out, obj_outdir/obj_out_l0000_0000.0005.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0005.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/h/runampl-hdztedel host=midway
+2013-08-27 01:14:04,284+0000 INFO RequestHandler Handler(tag: 44, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,284+0000 INFO RequestHandler Handler(tag: 46, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,285+0000 INFO RequestHandler Handler(tag: 45, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,285+0000 INFO RequestHandler Handler(tag: 47, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,286+0000 INFO RequestHandler Handler(tag: 48, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,286+0000 INFO RequestHandler Handler(tag: 49, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,329+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=14 Cpus sleeping: 1
+2013-08-27 01:14:04,330+0000 INFO Cpu 0827-1301520-000000:14 (quality: 0.5) submitting urn:1377566032136-1377566032146-1377566032147: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0015.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0015.out|outdir/xhat_l10000_00
01.0015.out|outdir/xhat_l20000_0001.0015.out|Results/ampl_res_l0000_0001.0015.out|outdir/out_l0000_0001.0015.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0015.out outdir/xhat_l20000_0001.0015.out obj_outdir/obj_out_l0000_0001.0015.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0015.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,330+0000 INFO RequestHandler Handler(tag: 465, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,330+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=8 Cpus sleeping: 1
+2013-08-27 01:14:04,330+0000 INFO Cpu 0827-1301520-000000:8 (quality: 0.5) submitting urn:1377566032140-1377566032153-1377566032154: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0006.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0006.out|outdir/xhat_l10000_000
1.0006.out|outdir/xhat_l20000_0001.0006.out|Results/ampl_res_l0000_0001.0006.out|outdir/out_l0000_0001.0006.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0006.out outdir/xhat_l20000_0001.0006.out obj_outdir/obj_out_l0000_0001.0006.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0006.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,330+0000 INFO RequestHandler Handler(tag: 466, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,330+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=3 Cpus sleeping: 1
+2013-08-27 01:14:04,330+0000 INFO Cpu 0827-1301520-000000:3 (quality: 0.5) submitting urn:1377566032141-1377566032159-1377566032160: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0019.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0019.out|outdir/xhat_l10000_000
1.0019.out|outdir/xhat_l20000_0001.0019.out|Results/ampl_res_l0000_0001.0019.out|outdir/out_l0000_0001.0019.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0019.out outdir/xhat_l20000_0001.0019.out obj_outdir/obj_out_l0000_0001.0019.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0019.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,331+0000 INFO RequestHandler Handler(tag: 467, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,331+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=11 Cpus sleeping: 1
+2013-08-27 01:14:04,331+0000 INFO Cpu 0827-1301520-000000:11 (quality: 0.5) submitting urn:1377566032157-1377566032168-1377566032169: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0000.0006.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0000.0006.out|outdir/xhat_l10000_00
00.0006.out|outdir/xhat_l20000_0000.0006.out|Results/ampl_res_l0000_0000.0006.out|outdir/out_l0000_0000.0006.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0006.out outdir/xhat_l20000_0000.0006.out obj_outdir/obj_out_l0000_0000.0006.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0006.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,331+0000 INFO RequestHandler Handler(tag: 468, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,331+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=13 Cpus sleeping: 1
+2013-08-27 01:14:04,331+0000 INFO Cpu 0827-1301520-000000:13 (quality: 0.5) submitting urn:1377566032162-1377566032172-1377566032173: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0004.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0004.out|outdir/xhat_l10000_00
01.0004.out|outdir/xhat_l20000_0001.0004.out|Results/ampl_res_l0000_0001.0004.out|outdir/out_l0000_0001.0004.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0004.out outdir/xhat_l20000_0001.0004.out obj_outdir/obj_out_l0000_0001.0004.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0004.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,331+0000 INFO RequestHandler Handler(tag: 469, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,331+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=0 Cpus sleeping: 1
+2013-08-27 01:14:04,331+0000 INFO Cpu 0827-1301520-000000:0 (quality: 0.5) submitting urn:1377566032165-1377566032177-1377566032178: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0010.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0010.out|outdir/xhat_l10000_000
1.0010.out|outdir/xhat_l20000_0001.0010.out|Results/ampl_res_l0000_0001.0010.out|outdir/out_l0000_0001.0010.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0010.out outdir/xhat_l20000_0001.0010.out obj_outdir/obj_out_l0000_0001.0010.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0010.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,331+0000 INFO RequestHandler Handler(tag: 470, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,332+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=12 Cpus sleeping: 1
+2013-08-27 01:14:04,332+0000 INFO Cpu 0827-1301520-000000:12 (quality: 0.5) submitting urn:1377566032164-1377566032182-1377566032183: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0000.0007.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0000.0007.out|outdir/xhat_l10000_00
00.0007.out|outdir/xhat_l20000_0000.0007.out|Results/ampl_res_l0000_0000.0007.out|outdir/out_l0000_0000.0007.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0007.out outdir/xhat_l20000_0000.0007.out obj_outdir/obj_out_l0000_0000.0007.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0007.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,332+0000 INFO RequestHandler Handler(tag: 471, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,332+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=9 Cpus sleeping: 1
+2013-08-27 01:14:04,332+0000 INFO Cpu 0827-1301520-000000:9 (quality: 0.5) submitting urn:1377566032175-1377566032187-1377566032188: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0014.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0014.out|outdir/xhat_l10000_000
1.0014.out|outdir/xhat_l20000_0001.0014.out|Results/ampl_res_l0000_0001.0014.out|outdir/out_l0000_0001.0014.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0014.out outdir/xhat_l20000_0001.0014.out obj_outdir/obj_out_l0000_0001.0014.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0014.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,332+0000 INFO RequestHandler Handler(tag: 472, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,332+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=1 Cpus sleeping: 1
+2013-08-27 01:14:04,332+0000 INFO Cpu 0827-1301520-000000:1 (quality: 0.5) submitting urn:1377566032180-1377566032190-1377566032191: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0005.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0005.out|outdir/xhat_l10000_000
1.0005.out|outdir/xhat_l20000_0001.0005.out|Results/ampl_res_l0000_0001.0005.out|outdir/out_l0000_0001.0005.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0005.out outdir/xhat_l20000_0001.0005.out obj_outdir/obj_out_l0000_0001.0005.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0005.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,332+0000 INFO RequestHandler Handler(tag: 473, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,332+0000 DEBUG Cpu requesting work: block=0827-1301520-000000 id=15 Cpus sleeping: 1
+2013-08-27 01:14:04,332+0000 INFO Cpu 0827-1301520-000000:15 (quality: 0.5) submitting urn:1377566032185-1377566032193-1377566032194: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0000.0005.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0000.0005.out|outdir/xhat_l10000_00
00.0005.out|outdir/xhat_l20000_0000.0005.out|Results/ampl_res_l0000_0000.0005.out|outdir/out_l0000_0000.0005.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0005.out outdir/xhat_l20000_0000.0005.out obj_outdir/obj_out_l0000_0000.0005.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0005.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,333+0000 INFO RequestHandler Handler(tag: 474, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,365+0000 INFO GetFileHandler Handler(tag: 3241, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,365+0000 INFO GetFileHandler Handler(tag: 3241, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,365+0000 INFO GetFileHandler Handler(tag: 3241, GET) -> 475
+2013-08-27 01:14:04,365+0000 INFO GetFileHandler Handler(tag: 475, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,365+0000 INFO GetFileHandler Handler(tag: 475, GET) reader: LR-Handler(tag: 475, GET)
+2013-08-27 01:14:04,365+0000 INFO GetFileHandler Handler(tag: 475, GET) sending length: 148937, 672775134
+2013-08-27 01:14:04,365+0000 INFO GetFileHandler Handler(tag: 3241, GET) sending length: 148937, 830275683
+2013-08-27 01:14:04,365+0000 INFO ReadBuffer RB-LR-Handler(tag: 475, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:04,365+0000 INFO ReadBuffer RB-LR-Handler(tag: 475, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:04,365+0000 INFO LocalIOProvider LR-Handler(tag: 475, GET) rbuf: RB-LR-Handler(tag: 475, GET)
+2013-08-27 01:14:04,365+0000 INFO GetFileHandler Handler(tag: 475, GET) unregistering (last)
+2013-08-27 01:14:04,365+0000 INFO GetFileHandler Handler(tag: 3241, GET) unregistering (last)
+2013-08-27 01:14:04,365+0000 INFO ReadBuffer RB-LR-Handler(tag: 475, GET) de-allocating 5 buffers
+2013-08-27 01:14:04,365+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:04,365+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:04,365+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:04,371+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,371+0000 INFO RequestHandler Handler(tag: 2682, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,371+0000 INFO RequestHandler Handler(tag: 476, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,371+0000 INFO PutFileHandler Handler(tag: 2683, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/f/runampl-fcztedel/wrapper.log
+2013-08-27 01:14:04,371+0000 INFO PutFileHandler Handler(tag: 2683, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-fcztedel.info
+2013-08-27 01:14:04,371+0000 INFO PutFileCommand Sending Command(tag: 477, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,371+0000 INFO PutFileCommand Command(tag: 477, PUT) (t) sending data
+2013-08-27 01:14:04,371+0000 INFO PutFileHandler Handler(tag: 2683, PUT) -> 477
+2013-08-27 01:14:04,371+0000 INFO PutFileHandler Handler(tag: 477, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/f/runampl-fcztedel/wrapper.log
+2013-08-27 01:14:04,372+0000 INFO PutFileHandler Handler(tag: 477, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-fcztedel.info
+2013-08-27 01:14:04,372+0000 INFO GetFileHandler Handler(tag: 3242, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,372+0000 INFO GetFileHandler Handler(tag: 3242, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,372+0000 INFO GetFileHandler Handler(tag: 3242, GET) -> 478
+2013-08-27 01:14:04,372+0000 INFO GetFileHandler Handler(tag: 478, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,372+0000 INFO GetFileHandler Handler(tag: 478, GET) reader: LR-Handler(tag: 478, GET)
+2013-08-27 01:14:04,372+0000 INFO GetFileHandler Handler(tag: 478, GET) sending length: 148937, 2099550687
+2013-08-27 01:14:04,372+0000 INFO ReadBuffer RB-LR-Handler(tag: 478, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:04,372+0000 INFO GetFileHandler Handler(tag: 3242, GET) sending length: 148937, 1844592552
+2013-08-27 01:14:04,372+0000 INFO ReadBuffer RB-LR-Handler(tag: 478, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:04,372+0000 INFO LocalIOProvider LR-Handler(tag: 478, GET) rbuf: RB-LR-Handler(tag: 478, GET)
+2013-08-27 01:14:04,374+0000 INFO GetFileHandler Handler(tag: 478, GET) unregistering (last)
+2013-08-27 01:14:04,374+0000 INFO ReadBuffer RB-LR-Handler(tag: 478, GET) de-allocating 5 buffers
+2013-08-27 01:14:04,374+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:04,374+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:04,374+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:04,374+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,374+0000 INFO RequestHandler Handler(tag: 2684, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,374+0000 INFO RequestHandler Handler(tag: 479, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,374+0000 INFO PutFileHandler Handler(tag: 2685, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/f/runampl-fcztedel/wrapper.error
+2013-08-27 01:14:04,374+0000 INFO PutFileHandler Handler(tag: 2685, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-fcztedel.error
+2013-08-27 01:14:04,374+0000 INFO PutFileCommand Sending Command(tag: 480, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,374+0000 INFO PutFileCommand Command(tag: 480, PUT) (t) sending data
+2013-08-27 01:14:04,374+0000 INFO PutFileHandler Handler(tag: 2685, PUT) -> 480
+2013-08-27 01:14:04,374+0000 INFO PutFileHandler Handler(tag: 480, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/f/runampl-fcztedel/wrapper.error
+2013-08-27 01:14:04,374+0000 INFO PutFileHandler Handler(tag: 480, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-fcztedel.error
+2013-08-27 01:14:04,374+0000 INFO PutFileHandler Handler(tag: 477, PUT) Transfer done
+2013-08-27 01:14:04,374+0000 INFO RequestHandler Handler(tag: 477, PUT) unregistering (send)
+2013-08-27 01:14:04,374+0000 INFO GetFileHandler Handler(tag: 3242, GET) unregistering (last)
+2013-08-27 01:14:04,374+0000 INFO PutFileHandler Handler(tag: 2683, PUT) Transfer done
+2013-08-27 01:14:04,374+0000 INFO RequestHandler Handler(tag: 2683, PUT) unregistering (send)
+2013-08-27 01:14:04,375+0000 INFO PutFileHandler Handler(tag: 480, PUT) Transfer done
+2013-08-27 01:14:04,375+0000 INFO RequestHandler Handler(tag: 480, PUT) unregistering (send)
+2013-08-27 01:14:04,375+0000 INFO PutFileHandler Handler(tag: 2685, PUT) Transfer done
+2013-08-27 01:14:04,375+0000 INFO RequestHandler Handler(tag: 2685, PUT) unregistering (send)
+2013-08-27 01:14:04,376+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,376+0000 INFO Cpu 0827-1301520-000001:0 jobTerminated
+2013-08-27 01:14:04,376+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=0
+2013-08-27 01:14:04,376+0000 INFO RequestHandler Handler(tag: 2686, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,376+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=0 Cpus sleeping: 1
+2013-08-27 01:14:04,376+0000 DEBUG Cpu 0827-1301520-000001:0 sleeping
+2013-08-27 01:14:04,376+0000 INFO RequestHandler Handler(tag: 481, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,377+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:04,378+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-fcztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,379+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-idztedel thread=R-42-0-1x2-17-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,379+0000 DEBUG swift JOB_START jobid=runampl-idztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0017.out, outdir/xhat_l20000_0001.0017.out, obj_outdir/obj_out_l0000_0001.0017.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0017.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/i/runampl-idztedel host=midway
+2013-08-27 01:14:04,380+0000 INFO RequestHandler Handler(tag: 50, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,391+0000 INFO GetFileHandler Handler(tag: 3243, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,391+0000 INFO GetFileHandler Handler(tag: 3243, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,391+0000 INFO GetFileHandler Handler(tag: 3243, GET) -> 482
+2013-08-27 01:14:04,391+0000 INFO GetFileHandler Handler(tag: 482, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,391+0000 INFO GetFileHandler Handler(tag: 482, GET) reader: LR-Handler(tag: 482, GET)
+2013-08-27 01:14:04,391+0000 INFO GetFileHandler Handler(tag: 482, GET) sending length: 148937, 1590791653
+2013-08-27 01:14:04,391+0000 INFO ReadBuffer RB-LR-Handler(tag: 482, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:04,391+0000 INFO GetFileHandler Handler(tag: 3243, GET) sending length: 148937, 263906821
+2013-08-27 01:14:04,391+0000 INFO ReadBuffer RB-LR-Handler(tag: 482, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:04,391+0000 INFO LocalIOProvider LR-Handler(tag: 482, GET) rbuf: RB-LR-Handler(tag: 482, GET)
+2013-08-27 01:14:04,391+0000 INFO ThrottleManager O maxBuffers=1024, crtBuffers=1, allowedTransfers=255, active=0, suspended=0
+2013-08-27 01:14:04,391+0000 INFO GetFileHandler Handler(tag: 482, GET) unregistering (last)
+2013-08-27 01:14:04,391+0000 INFO ThrottleManager mem=110.8 MB, heap=401.94 MB, maxHeap=910.25 MB
+2013-08-27 01:14:04,391+0000 INFO ReadBuffer RB-LR-Handler(tag: 482, GET) de-allocating 5 buffers
+2013-08-27 01:14:04,391+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:04,391+0000 INFO GetFileHandler Handler(tag: 3243, GET) unregistering (last)
+2013-08-27 01:14:04,400+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,400+0000 INFO RequestHandler Handler(tag: 2687, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,400+0000 INFO RequestHandler Handler(tag: 483, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,400+0000 INFO PutFileHandler Handler(tag: 2688, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/6/runampl-6cztedel/wrapper.error
+2013-08-27 01:14:04,400+0000 INFO PutFileHandler Handler(tag: 2688, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-6cztedel.error
+2013-08-27 01:14:04,400+0000 INFO PutFileCommand Sending Command(tag: 484, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,400+0000 INFO PutFileCommand Command(tag: 484, PUT) (t) sending data
+2013-08-27 01:14:04,400+0000 INFO PutFileHandler Handler(tag: 484, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/6/runampl-6cztedel/wrapper.error
+2013-08-27 01:14:04,400+0000 INFO PutFileHandler Handler(tag: 2688, PUT) -> 484
+2013-08-27 01:14:04,400+0000 INFO PutFileHandler Handler(tag: 484, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-6cztedel.error
+2013-08-27 01:14:04,400+0000 INFO ThrottleManager I maxBuffers=1024, crtBuffers=0, allowedTransfers=256, active=0, suspended=0
+2013-08-27 01:14:04,400+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,400+0000 INFO RequestHandler Handler(tag: 2689, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,400+0000 INFO PutFileHandler Handler(tag: 484, PUT) Transfer done
+2013-08-27 01:14:04,400+0000 INFO RequestHandler Handler(tag: 485, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,400+0000 INFO RequestHandler Handler(tag: 484, PUT) unregistering (send)
+2013-08-27 01:14:04,400+0000 INFO PutFileHandler Handler(tag: 2688, PUT) Transfer done
+2013-08-27 01:14:04,400+0000 INFO PutFileHandler Handler(tag: 2690, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/6/runampl-6cztedel/wrapper.log
+2013-08-27 01:14:04,400+0000 INFO RequestHandler Handler(tag: 2688, PUT) unregistering (send)
+2013-08-27 01:14:04,401+0000 INFO PutFileHandler Handler(tag: 2690, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-6cztedel.info
+2013-08-27 01:14:04,401+0000 INFO PutFileCommand Sending Command(tag: 486, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,401+0000 INFO PutFileCommand Command(tag: 486, PUT) (t) sending data
+2013-08-27 01:14:04,401+0000 INFO PutFileHandler Handler(tag: 2690, PUT) -> 486
+2013-08-27 01:14:04,401+0000 INFO PutFileHandler Handler(tag: 486, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/6/runampl-6cztedel/wrapper.log
+2013-08-27 01:14:04,401+0000 INFO PutFileHandler Handler(tag: 486, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-6cztedel.info
+2013-08-27 01:14:04,402+0000 INFO PutFileHandler Handler(tag: 486, PUT) Transfer done
+2013-08-27 01:14:04,402+0000 INFO RequestHandler Handler(tag: 486, PUT) unregistering (send)
+2013-08-27 01:14:04,402+0000 INFO PutFileHandler Handler(tag: 2690, PUT) Transfer done
+2013-08-27 01:14:04,402+0000 INFO RequestHandler Handler(tag: 2690, PUT) unregistering (send)
+2013-08-27 01:14:04,405+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,405+0000 INFO RequestHandler Handler(tag: 2691, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,405+0000 INFO RequestHandler Handler(tag: 487, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,405+0000 INFO PutFileHandler Handler(tag: 2692, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/h/runampl-hcztedel/wrapper.log
+2013-08-27 01:14:04,405+0000 INFO PutFileHandler Handler(tag: 2692, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-hcztedel.info
+2013-08-27 01:14:04,405+0000 INFO PutFileCommand Sending Command(tag: 488, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,405+0000 INFO PutFileCommand Command(tag: 488, PUT) (t) sending data
+2013-08-27 01:14:04,405+0000 INFO PutFileHandler Handler(tag: 2692, PUT) -> 488
+2013-08-27 01:14:04,405+0000 INFO PutFileHandler Handler(tag: 488, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/h/runampl-hcztedel/wrapper.log
+2013-08-27 01:14:04,405+0000 INFO PutFileHandler Handler(tag: 488, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-hcztedel.info
+2013-08-27 01:14:04,406+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,406+0000 INFO RequestHandler Handler(tag: 2693, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,406+0000 INFO RequestHandler Handler(tag: 489, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,406+0000 INFO PutFileHandler Handler(tag: 2694, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/h/runampl-hcztedel/wrapper.error
+2013-08-27 01:14:04,406+0000 INFO PutFileHandler Handler(tag: 2694, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-hcztedel.error
+2013-08-27 01:14:04,406+0000 INFO PutFileCommand Sending Command(tag: 490, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,406+0000 INFO PutFileCommand Command(tag: 490, PUT) (t) sending data
+2013-08-27 01:14:04,406+0000 INFO PutFileHandler Handler(tag: 2694, PUT) -> 490
+2013-08-27 01:14:04,406+0000 INFO PutFileHandler Handler(tag: 490, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/h/runampl-hcztedel/wrapper.error
+2013-08-27 01:14:04,406+0000 INFO PutFileHandler Handler(tag: 490, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-hcztedel.error
+2013-08-27 01:14:04,406+0000 INFO PutFileHandler Handler(tag: 488, PUT) Transfer done
+2013-08-27 01:14:04,406+0000 INFO RequestHandler Handler(tag: 488, PUT) unregistering (send)
+2013-08-27 01:14:04,406+0000 INFO PutFileHandler Handler(tag: 2692, PUT) Transfer done
+2013-08-27 01:14:04,406+0000 INFO RequestHandler Handler(tag: 2692, PUT) unregistering (send)
+2013-08-27 01:14:04,407+0000 INFO PutFileHandler Handler(tag: 490, PUT) Transfer done
+2013-08-27 01:14:04,407+0000 INFO RequestHandler Handler(tag: 490, PUT) unregistering (send)
+2013-08-27 01:14:04,407+0000 INFO PutFileHandler Handler(tag: 2694, PUT) Transfer done
+2013-08-27 01:14:04,407+0000 INFO RequestHandler Handler(tag: 2694, PUT) unregistering (send)
+2013-08-27 01:14:04,410+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,410+0000 INFO Cpu 0827-1301520-000001:5 jobTerminated
+2013-08-27 01:14:04,410+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=5
+2013-08-27 01:14:04,410+0000 INFO RequestHandler Handler(tag: 2695, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,410+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=5 Cpus sleeping: 2
+2013-08-27 01:14:04,410+0000 INFO Cpu 0827-1301520-000001:5 (quality: 0.5) submitting urn:1377566032199-1377566032201-1377566032202: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0017.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0017.out|outdir/xhat_l10000_000
1.0017.out|outdir/xhat_l20000_0001.0017.out|Results/ampl_res_l0000_0001.0017.out|outdir/out_l0000_0001.0017.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0017.out outdir/xhat_l20000_0001.0017.out obj_outdir/obj_out_l0000_0001.0017.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0017.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,410+0000 INFO RequestHandler Handler(tag: 491, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,410+0000 INFO RequestHandler Handler(tag: 492, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,410+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=0 Cpus sleeping: 1
+2013-08-27 01:14:04,410+0000 DEBUG Cpu 0827-1301520-000001:0 sleeping
+2013-08-27 01:14:04,410+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,410+0000 INFO Cpu 0827-1301520-000001:1 jobTerminated
+2013-08-27 01:14:04,410+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=1
+2013-08-27 01:14:04,410+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=1 Cpus sleeping: 2
+2013-08-27 01:14:04,410+0000 INFO RequestHandler Handler(tag: 2696, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,410+0000 DEBUG Cpu 0827-1301520-000001:1 sleeping
+2013-08-27 01:14:04,411+0000 INFO RequestHandler Handler(tag: 493, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,411+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:04,411+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-6cztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,411+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:04,412+0000 INFO RequestHandler Handler(tag: 494, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,412+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-hcztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,412+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,412+0000 INFO RequestHandler Handler(tag: 2697, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,412+0000 INFO RequestHandler Handler(tag: 495, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,412+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-jdztedel thread=R-42-0-1-0-9-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,412+0000 INFO GetFileHandler Handler(tag: 2698, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,412+0000 INFO GetFileHandler Handler(tag: 2698, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,412+0000 INFO GetFileHandler Handler(tag: 2698, GET) -> 496
+2013-08-27 01:14:04,412+0000 INFO GetFileHandler Handler(tag: 496, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,412+0000 DEBUG swift JOB_START jobid=runampl-jdztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0009.out, outdir/xhat_l20000_0000.0009.out, obj_outdir/obj_out_l0000_0000.0009.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0009.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/j/runampl-jdztedel host=midway
+2013-08-27 01:14:04,413+0000 INFO GetFileHandler Handler(tag: 496, GET) reader: LR-Handler(tag: 496, GET)
+2013-08-27 01:14:04,413+0000 INFO GetFileHandler Handler(tag: 496, GET) sending length: 1925, 629630208
+2013-08-27 01:14:04,413+0000 INFO ReadBuffer RB-LR-Handler(tag: 496, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,413+0000 INFO GetFileHandler Handler(tag: 2698, GET) sending length: 1925, 1542977087
+2013-08-27 01:14:04,413+0000 INFO ReadBuffer RB-LR-Handler(tag: 496, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,413+0000 INFO LocalIOProvider LR-Handler(tag: 496, GET) rbuf: RB-LR-Handler(tag: 496, GET)
+2013-08-27 01:14:04,413+0000 INFO GetFileHandler Handler(tag: 496, GET) unregistering (last)
+2013-08-27 01:14:04,413+0000 INFO ReadBuffer RB-LR-Handler(tag: 496, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,413+0000 INFO GetFileHandler Handler(tag: 2698, GET) unregistering (last)
+2013-08-27 01:14:04,413+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-kdztedel thread=R-42-0-1x2-3-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,413+0000 DEBUG swift JOB_START jobid=runampl-kdztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0003.out, outdir/xhat_l20000_0001.0003.out, obj_outdir/obj_out_l0000_0001.0003.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0003.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/k/runampl-kdztedel host=midway
+2013-08-27 01:14:04,414+0000 INFO GetFileHandler Handler(tag: 2699, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,414+0000 INFO GetFileHandler Handler(tag: 2699, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,414+0000 INFO GetFileHandler Handler(tag: 2699, GET) -> 497
+2013-08-27 01:14:04,414+0000 INFO GetFileHandler Handler(tag: 497, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,414+0000 INFO GetFileHandler Handler(tag: 497, GET) reader: LR-Handler(tag: 497, GET)
+2013-08-27 01:14:04,414+0000 INFO GetFileHandler Handler(tag: 497, GET) sending length: 14799449, 645444545
+2013-08-27 01:14:04,414+0000 INFO ReadBuffer RB-LR-Handler(tag: 497, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,414+0000 INFO GetFileHandler Handler(tag: 2699, GET) sending length: 14799449, 1046566818
+2013-08-27 01:14:04,414+0000 INFO ReadBuffer RB-LR-Handler(tag: 497, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,414+0000 INFO LocalIOProvider LR-Handler(tag: 497, GET) rbuf: RB-LR-Handler(tag: 497, GET)
+2013-08-27 01:14:04,414+0000 INFO RequestHandler Handler(tag: 51, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,415+0000 INFO RequestHandler Handler(tag: 52, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,422+0000 INFO GetFileHandler Handler(tag: 497, GET) unregistering (last)
+2013-08-27 01:14:04,422+0000 INFO ReadBuffer RB-LR-Handler(tag: 497, GET) de-allocating 8 buffers
+2013-08-27 01:14:04,422+0000 INFO GetFileHandler Handler(tag: 2699, GET) unregistering (last)
+2013-08-27 01:14:04,453+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,453+0000 INFO RequestHandler Handler(tag: 2700, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,454+0000 INFO RequestHandler Handler(tag: 498, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,454+0000 INFO PutFileHandler Handler(tag: 2701, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/j/runampl-jcztedel/wrapper.error
+2013-08-27 01:14:04,454+0000 INFO PutFileHandler Handler(tag: 2701, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-jcztedel.error
+2013-08-27 01:14:04,454+0000 INFO PutFileCommand Sending Command(tag: 499, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,454+0000 INFO PutFileCommand Command(tag: 499, PUT) (t) sending data
+2013-08-27 01:14:04,454+0000 INFO PutFileHandler Handler(tag: 499, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/j/runampl-jcztedel/wrapper.error
+2013-08-27 01:14:04,454+0000 INFO PutFileHandler Handler(tag: 2701, PUT) -> 499
+2013-08-27 01:14:04,454+0000 INFO PutFileHandler Handler(tag: 499, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-jcztedel.error
+2013-08-27 01:14:04,454+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,454+0000 INFO RequestHandler Handler(tag: 2702, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,454+0000 INFO RequestHandler Handler(tag: 500, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,454+0000 INFO PutFileHandler Handler(tag: 2703, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/j/runampl-jcztedel/wrapper.log
+2013-08-27 01:14:04,454+0000 INFO PutFileHandler Handler(tag: 2703, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-jcztedel.info
+2013-08-27 01:14:04,454+0000 INFO PutFileCommand Sending Command(tag: 501, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,454+0000 INFO PutFileCommand Command(tag: 501, PUT) (t) sending data
+2013-08-27 01:14:04,454+0000 INFO PutFileHandler Handler(tag: 501, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/j/runampl-jcztedel/wrapper.log
+2013-08-27 01:14:04,454+0000 INFO PutFileHandler Handler(tag: 2703, PUT) -> 501
+2013-08-27 01:14:04,454+0000 INFO PutFileHandler Handler(tag: 501, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-jcztedel.info
+2013-08-27 01:14:04,454+0000 INFO PutFileHandler Handler(tag: 499, PUT) Transfer done
+2013-08-27 01:14:04,454+0000 INFO RequestHandler Handler(tag: 499, PUT) unregistering (send)
+2013-08-27 01:14:04,454+0000 INFO PutFileHandler Handler(tag: 2701, PUT) Transfer done
+2013-08-27 01:14:04,454+0000 INFO RequestHandler Handler(tag: 2701, PUT) unregistering (send)
+2013-08-27 01:14:04,455+0000 INFO PutFileHandler Handler(tag: 501, PUT) Transfer done
+2013-08-27 01:14:04,455+0000 INFO RequestHandler Handler(tag: 501, PUT) unregistering (send)
+2013-08-27 01:14:04,456+0000 INFO PutFileHandler Handler(tag: 2703, PUT) Transfer done
+2013-08-27 01:14:04,456+0000 INFO RequestHandler Handler(tag: 2703, PUT) unregistering (send)
+2013-08-27 01:14:04,460+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,460+0000 INFO RequestHandler Handler(tag: 2704, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,461+0000 INFO RequestHandler Handler(tag: 502, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,461+0000 INFO PutFileHandler Handler(tag: 2705, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/8/runampl-8cztedel/wrapper.log
+2013-08-27 01:14:04,461+0000 INFO PutFileHandler Handler(tag: 2705, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-8cztedel.info
+2013-08-27 01:14:04,461+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=0 Cpus sleeping: 1
+2013-08-27 01:14:04,461+0000 INFO PutFileCommand Sending Command(tag: 503, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,461+0000 INFO PutFileCommand Command(tag: 503, PUT) (t) sending data
+2013-08-27 01:14:04,461+0000 INFO PutFileHandler Handler(tag: 2705, PUT) -> 503
+2013-08-27 01:14:04,461+0000 INFO PutFileHandler Handler(tag: 503, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/8/runampl-8cztedel/wrapper.log
+2013-08-27 01:14:04,461+0000 INFO PutFileHandler Handler(tag: 503, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-8cztedel.info
+2013-08-27 01:14:04,461+0000 INFO Cpu 0827-1301520-000001:0 (quality: 0.5) submitting urn:1377566032210-1377566032213-1377566032214: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0000.0009.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0000.0009.out|outdir/xhat_l10000_000
0.0009.out|outdir/xhat_l20000_0000.0009.out|Results/ampl_res_l0000_0000.0009.out|outdir/out_l0000_0000.0009.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0009.out outdir/xhat_l20000_0000.0009.out obj_outdir/obj_out_l0000_0000.0009.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0009.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,461+0000 INFO RequestHandler Handler(tag: 504, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,461+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=1 Cpus sleeping: 1
+2013-08-27 01:14:04,461+0000 INFO Cpu 0827-1301520-000001:1 (quality: 0.5) submitting urn:1377566032215-1377566032217-1377566032218: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0003.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0003.out|outdir/xhat_l10000_000
1.0003.out|outdir/xhat_l20000_0001.0003.out|Results/ampl_res_l0000_0001.0003.out|outdir/out_l0000_0001.0003.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0003.out outdir/xhat_l20000_0001.0003.out obj_outdir/obj_out_l0000_0001.0003.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0003.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,461+0000 INFO GetFileHandler Handler(tag: 3244, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,461+0000 INFO RequestHandler Handler(tag: 505, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,461+0000 INFO GetFileHandler Handler(tag: 3244, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,461+0000 INFO GetFileHandler Handler(tag: 3244, GET) -> 506
+2013-08-27 01:14:04,461+0000 INFO GetFileHandler Handler(tag: 506, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,461+0000 INFO GetFileHandler Handler(tag: 506, GET) reader: LR-Handler(tag: 506, GET)
+2013-08-27 01:14:04,461+0000 INFO GetFileHandler Handler(tag: 506, GET) sending length: 148937, 636469761
+2013-08-27 01:14:04,461+0000 INFO ReadBuffer RB-LR-Handler(tag: 506, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:04,461+0000 INFO GetFileHandler Handler(tag: 3244, GET) sending length: 148937, 531227420
+2013-08-27 01:14:04,461+0000 INFO ReadBuffer RB-LR-Handler(tag: 506, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:04,461+0000 INFO LocalIOProvider LR-Handler(tag: 506, GET) rbuf: RB-LR-Handler(tag: 506, GET)
+2013-08-27 01:14:04,461+0000 INFO GetFileHandler Handler(tag: 3245, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,462+0000 INFO GetFileHandler Handler(tag: 3245, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,462+0000 INFO GetFileHandler Handler(tag: 3245, GET) -> 507
+2013-08-27 01:14:04,462+0000 INFO GetFileHandler Handler(tag: 507, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,462+0000 INFO GetFileHandler Handler(tag: 507, GET) reader: LR-Handler(tag: 507, GET)
+2013-08-27 01:14:04,462+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,462+0000 INFO GetFileHandler Handler(tag: 506, GET) unregistering (last)
+2013-08-27 01:14:04,462+0000 INFO RequestHandler Handler(tag: 2706, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,462+0000 INFO GetFileHandler Handler(tag: 507, GET) sending length: 14799449, 567695038
+2013-08-27 01:14:04,462+0000 INFO PutFileHandler Handler(tag: 503, PUT) Transfer done
+2013-08-27 01:14:04,462+0000 INFO ReadBuffer RB-LR-Handler(tag: 506, GET) de-allocating 5 buffers
+2013-08-27 01:14:04,462+0000 INFO RequestHandler Handler(tag: 503, PUT) unregistering (send)
+2013-08-27 01:14:04,462+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:04,462+0000 INFO ReadBuffer RB-LR-Handler(tag: 507, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,462+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:04,462+0000 INFO GetFileHandler Handler(tag: 3244, GET) unregistering (last)
+2013-08-27 01:14:04,462+0000 INFO NIOChannelReadBuffer Transfer done. De-allocating one unused buffer
+2013-08-27 01:14:04,462+0000 INFO GetFileHandler Handler(tag: 3245, GET) sending length: 14799449, 2128143692
+2013-08-27 01:14:04,462+0000 INFO ReadBuffer RB-LR-Handler(tag: 507, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,462+0000 INFO PutFileHandler Handler(tag: 2705, PUT) Transfer done
+2013-08-27 01:14:04,462+0000 INFO PutFileHandler Handler(tag: 2707, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/o/runampl-ocztedel/wrapper.log
+2013-08-27 01:14:04,462+0000 INFO RequestHandler Handler(tag: 2705, PUT) unregistering (send)
+2013-08-27 01:14:04,462+0000 INFO LocalIOProvider LR-Handler(tag: 507, GET) rbuf: RB-LR-Handler(tag: 507, GET)
+2013-08-27 01:14:04,462+0000 INFO PutFileHandler Handler(tag: 2707, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ocztedel.info
+2013-08-27 01:14:04,462+0000 INFO PutFileCommand Sending Command(tag: 509, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,462+0000 INFO PutFileCommand Command(tag: 509, PUT) (t) sending data
+2013-08-27 01:14:04,462+0000 INFO RequestHandler Handler(tag: 508, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,462+0000 INFO PutFileHandler Handler(tag: 2707, PUT) -> 509
+2013-08-27 01:14:04,462+0000 INFO PutFileHandler Handler(tag: 509, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/o/runampl-ocztedel/wrapper.log
+2013-08-27 01:14:04,462+0000 INFO PutFileHandler Handler(tag: 509, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ocztedel.info
+2013-08-27 01:14:04,462+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,462+0000 INFO RequestHandler Handler(tag: 2708, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,462+0000 INFO RequestHandler Handler(tag: 510, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,462+0000 INFO PutFileHandler Handler(tag: 2709, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/8/runampl-8cztedel/wrapper.error
+2013-08-27 01:14:04,462+0000 INFO PutFileHandler Handler(tag: 2709, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-8cztedel.error
+2013-08-27 01:14:04,462+0000 INFO PutFileCommand Sending Command(tag: 511, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,462+0000 INFO PutFileCommand Command(tag: 511, PUT) (t) sending data
+2013-08-27 01:14:04,462+0000 INFO PutFileHandler Handler(tag: 2709, PUT) -> 511
+2013-08-27 01:14:04,462+0000 INFO PutFileHandler Handler(tag: 511, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/8/runampl-8cztedel/wrapper.error
+2013-08-27 01:14:04,462+0000 INFO PutFileHandler Handler(tag: 511, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-8cztedel.error
+2013-08-27 01:14:04,463+0000 INFO RequestHandler Handler(tag: 512, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,463+0000 INFO PutFileHandler Handler(tag: 511, PUT) Transfer done
+2013-08-27 01:14:04,463+0000 INFO RequestHandler Handler(tag: 511, PUT) unregistering (send)
+2013-08-27 01:14:04,463+0000 INFO PutFileHandler Handler(tag: 2709, PUT) Transfer done
+2013-08-27 01:14:04,463+0000 INFO RequestHandler Handler(tag: 2709, PUT) unregistering (send)
+2013-08-27 01:14:04,463+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,463+0000 INFO RequestHandler Handler(tag: 3246, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,463+0000 INFO RequestHandler Handler(tag: 513, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,463+0000 INFO GetFileHandler Handler(tag: 3247, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,463+0000 INFO GetFileHandler Handler(tag: 3247, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,463+0000 INFO GetFileHandler Handler(tag: 3247, GET) -> 514
+2013-08-27 01:14:04,463+0000 INFO GetFileHandler Handler(tag: 514, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,463+0000 INFO GetFileHandler Handler(tag: 514, GET) reader: LR-Handler(tag: 514, GET)
+2013-08-27 01:14:04,463+0000 INFO GetFileHandler Handler(tag: 514, GET) sending length: 1925, 514149607
+2013-08-27 01:14:04,463+0000 INFO ReadBuffer RB-LR-Handler(tag: 514, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,463+0000 INFO ReadBuffer RB-LR-Handler(tag: 514, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,463+0000 INFO LocalIOProvider LR-Handler(tag: 514, GET) rbuf: RB-LR-Handler(tag: 514, GET)
+2013-08-27 01:14:04,463+0000 INFO GetFileHandler Handler(tag: 514, GET) unregistering (last)
+2013-08-27 01:14:04,463+0000 INFO ReadBuffer RB-LR-Handler(tag: 514, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,463+0000 INFO GetFileHandler Handler(tag: 3247, GET) sending length: 1925, 170635149
+2013-08-27 01:14:04,463+0000 INFO GetFileHandler Handler(tag: 3247, GET) unregistering (last)
+2013-08-27 01:14:04,464+0000 INFO RequestHandler Handler(tag: 515, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,464+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,464+0000 INFO RequestHandler Handler(tag: 3248, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,464+0000 INFO RequestHandler Handler(tag: 516, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,464+0000 INFO GetFileHandler Handler(tag: 3249, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,464+0000 INFO GetFileHandler Handler(tag: 3249, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,464+0000 INFO GetFileHandler Handler(tag: 3249, GET) -> 517
+2013-08-27 01:14:04,464+0000 INFO GetFileHandler Handler(tag: 517, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,464+0000 INFO GetFileHandler Handler(tag: 517, GET) reader: LR-Handler(tag: 517, GET)
+2013-08-27 01:14:04,464+0000 INFO GetFileHandler Handler(tag: 517, GET) sending length: 1925, 1584719455
+2013-08-27 01:14:04,464+0000 INFO ReadBuffer RB-LR-Handler(tag: 517, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,464+0000 INFO ReadBuffer RB-LR-Handler(tag: 517, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,464+0000 INFO LocalIOProvider LR-Handler(tag: 517, GET) rbuf: RB-LR-Handler(tag: 517, GET)
+2013-08-27 01:14:04,464+0000 INFO GetFileHandler Handler(tag: 517, GET) unregistering (last)
+2013-08-27 01:14:04,464+0000 INFO ReadBuffer RB-LR-Handler(tag: 517, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,464+0000 INFO GetFileHandler Handler(tag: 3249, GET) sending length: 1925, 2014648618
+2013-08-27 01:14:04,464+0000 INFO GetFileHandler Handler(tag: 3249, GET) unregistering (last)
+2013-08-27 01:14:04,465+0000 INFO RequestHandler Handler(tag: 518, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,465+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,465+0000 INFO RequestHandler Handler(tag: 3250, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,465+0000 INFO RequestHandler Handler(tag: 519, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,465+0000 INFO GetFileHandler Handler(tag: 3251, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,465+0000 INFO GetFileHandler Handler(tag: 3251, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,465+0000 INFO GetFileHandler Handler(tag: 3251, GET) -> 520
+2013-08-27 01:14:04,465+0000 INFO GetFileHandler Handler(tag: 520, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,465+0000 INFO GetFileHandler Handler(tag: 520, GET) reader: LR-Handler(tag: 520, GET)
+2013-08-27 01:14:04,465+0000 INFO GetFileHandler Handler(tag: 520, GET) sending length: 1925, 244101068
+2013-08-27 01:14:04,465+0000 INFO ReadBuffer RB-LR-Handler(tag: 520, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,465+0000 INFO ReadBuffer RB-LR-Handler(tag: 520, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,465+0000 INFO LocalIOProvider LR-Handler(tag: 520, GET) rbuf: RB-LR-Handler(tag: 520, GET)
+2013-08-27 01:14:04,465+0000 INFO GetFileHandler Handler(tag: 520, GET) unregistering (last)
+2013-08-27 01:14:04,465+0000 INFO ReadBuffer RB-LR-Handler(tag: 520, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,465+0000 INFO GetFileHandler Handler(tag: 3251, GET) sending length: 1925, 1219995374
+2013-08-27 01:14:04,465+0000 INFO GetFileHandler Handler(tag: 3251, GET) unregistering (last)
+2013-08-27 01:14:04,466+0000 INFO RequestHandler Handler(tag: 521, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,466+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,466+0000 INFO RequestHandler Handler(tag: 3252, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,466+0000 INFO RequestHandler Handler(tag: 522, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,466+0000 INFO GetFileHandler Handler(tag: 3253, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,466+0000 INFO GetFileHandler Handler(tag: 3253, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,466+0000 INFO GetFileHandler Handler(tag: 3253, GET) -> 523
+2013-08-27 01:14:04,466+0000 INFO GetFileHandler Handler(tag: 523, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,466+0000 INFO GetFileHandler Handler(tag: 523, GET) reader: LR-Handler(tag: 523, GET)
+2013-08-27 01:14:04,466+0000 INFO GetFileHandler Handler(tag: 523, GET) sending length: 1925, 1390968243
+2013-08-27 01:14:04,466+0000 INFO ReadBuffer RB-LR-Handler(tag: 523, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,466+0000 INFO ReadBuffer RB-LR-Handler(tag: 523, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,466+0000 INFO LocalIOProvider LR-Handler(tag: 523, GET) rbuf: RB-LR-Handler(tag: 523, GET)
+2013-08-27 01:14:04,466+0000 INFO GetFileHandler Handler(tag: 523, GET) unregistering (last)
+2013-08-27 01:14:04,466+0000 INFO ReadBuffer RB-LR-Handler(tag: 523, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,466+0000 INFO GetFileHandler Handler(tag: 3253, GET) sending length: 1925, 132298265
+2013-08-27 01:14:04,466+0000 INFO GetFileHandler Handler(tag: 3253, GET) unregistering (last)
+2013-08-27 01:14:04,467+0000 INFO RequestHandler Handler(tag: 524, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,467+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,467+0000 INFO RequestHandler Handler(tag: 3254, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,467+0000 INFO RequestHandler Handler(tag: 525, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,467+0000 INFO GetFileHandler Handler(tag: 3255, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,467+0000 INFO GetFileHandler Handler(tag: 3255, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,467+0000 INFO GetFileHandler Handler(tag: 3255, GET) -> 526
+2013-08-27 01:14:04,467+0000 INFO GetFileHandler Handler(tag: 526, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,467+0000 INFO PutFileHandler Handler(tag: 509, PUT) Transfer done
+2013-08-27 01:14:04,467+0000 INFO RequestHandler Handler(tag: 509, PUT) unregistering (send)
+2013-08-27 01:14:04,467+0000 INFO GetFileHandler Handler(tag: 526, GET) reader: LR-Handler(tag: 526, GET)
+2013-08-27 01:14:04,467+0000 INFO GetFileHandler Handler(tag: 526, GET) sending length: 1925, 324632714
+2013-08-27 01:14:04,467+0000 INFO ReadBuffer RB-LR-Handler(tag: 526, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,467+0000 INFO PutFileHandler Handler(tag: 2707, PUT) Transfer done
+2013-08-27 01:14:04,467+0000 INFO ReadBuffer RB-LR-Handler(tag: 526, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,467+0000 INFO LocalIOProvider LR-Handler(tag: 526, GET) rbuf: RB-LR-Handler(tag: 526, GET)
+2013-08-27 01:14:04,467+0000 INFO RequestHandler Handler(tag: 2707, PUT) unregistering (send)
+2013-08-27 01:14:04,467+0000 INFO GetFileHandler Handler(tag: 526, GET) unregistering (last)
+2013-08-27 01:14:04,467+0000 INFO ReadBuffer RB-LR-Handler(tag: 526, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,467+0000 INFO GetFileHandler Handler(tag: 3255, GET) sending length: 1925, 340318343
+2013-08-27 01:14:04,467+0000 INFO GetFileHandler Handler(tag: 3255, GET) unregistering (last)
+2013-08-27 01:14:04,468+0000 INFO RequestHandler Handler(tag: 527, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,468+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,468+0000 INFO RequestHandler Handler(tag: 2710, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,468+0000 INFO RequestHandler Handler(tag: 528, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,468+0000 INFO PutFileHandler Handler(tag: 2711, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/o/runampl-ocztedel/wrapper.error
+2013-08-27 01:14:04,468+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,468+0000 INFO RequestHandler Handler(tag: 3256, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,468+0000 INFO PutFileHandler Handler(tag: 2711, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ocztedel.error
+2013-08-27 01:14:04,468+0000 INFO RequestHandler Handler(tag: 529, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,468+0000 INFO PutFileCommand Sending Command(tag: 530, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,468+0000 INFO PutFileCommand Command(tag: 530, PUT) (t) sending data
+2013-08-27 01:14:04,468+0000 INFO PutFileHandler Handler(tag: 2711, PUT) -> 530
+2013-08-27 01:14:04,468+0000 INFO PutFileHandler Handler(tag: 530, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/o/runampl-ocztedel/wrapper.error
+2013-08-27 01:14:04,468+0000 INFO PutFileHandler Handler(tag: 530, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ocztedel.error
+2013-08-27 01:14:04,468+0000 INFO GetFileHandler Handler(tag: 3257, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,468+0000 INFO GetFileHandler Handler(tag: 3257, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,468+0000 INFO GetFileHandler Handler(tag: 3257, GET) -> 531
+2013-08-27 01:14:04,468+0000 INFO GetFileHandler Handler(tag: 531, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,468+0000 INFO GetFileHandler Handler(tag: 531, GET) reader: LR-Handler(tag: 531, GET)
+2013-08-27 01:14:04,468+0000 INFO GetFileHandler Handler(tag: 531, GET) sending length: 1925, 1960480050
+2013-08-27 01:14:04,468+0000 INFO ReadBuffer RB-LR-Handler(tag: 531, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,468+0000 INFO ReadBuffer RB-LR-Handler(tag: 531, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,468+0000 INFO LocalIOProvider LR-Handler(tag: 531, GET) rbuf: RB-LR-Handler(tag: 531, GET)
+2013-08-27 01:14:04,468+0000 INFO GetFileHandler Handler(tag: 531, GET) unregistering (last)
+2013-08-27 01:14:04,468+0000 INFO ReadBuffer RB-LR-Handler(tag: 531, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,468+0000 INFO GetFileHandler Handler(tag: 3257, GET) sending length: 1925, 1797840777
+2013-08-27 01:14:04,468+0000 INFO PutFileHandler Handler(tag: 530, PUT) Transfer done
+2013-08-27 01:14:04,468+0000 INFO RequestHandler Handler(tag: 532, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,468+0000 INFO RequestHandler Handler(tag: 530, PUT) unregistering (send)
+2013-08-27 01:14:04,469+0000 INFO GetFileHandler Handler(tag: 3257, GET) unregistering (last)
+2013-08-27 01:14:04,469+0000 INFO PutFileHandler Handler(tag: 2711, PUT) Transfer done
+2013-08-27 01:14:04,469+0000 INFO RequestHandler Handler(tag: 2711, PUT) unregistering (send)
+2013-08-27 01:14:04,469+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,469+0000 INFO RequestHandler Handler(tag: 3258, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,469+0000 INFO RequestHandler Handler(tag: 533, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,469+0000 INFO GetFileHandler Handler(tag: 3259, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,469+0000 INFO GetFileHandler Handler(tag: 3259, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,469+0000 INFO GetFileHandler Handler(tag: 3259, GET) -> 534
+2013-08-27 01:14:04,469+0000 INFO GetFileHandler Handler(tag: 534, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,469+0000 INFO GetFileHandler Handler(tag: 534, GET) reader: LR-Handler(tag: 534, GET)
+2013-08-27 01:14:04,469+0000 INFO GetFileHandler Handler(tag: 534, GET) sending length: 1925, 515764120
+2013-08-27 01:14:04,469+0000 INFO ReadBuffer RB-LR-Handler(tag: 534, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,469+0000 INFO ReadBuffer RB-LR-Handler(tag: 534, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,469+0000 INFO LocalIOProvider LR-Handler(tag: 534, GET) rbuf: RB-LR-Handler(tag: 534, GET)
+2013-08-27 01:14:04,469+0000 INFO GetFileHandler Handler(tag: 534, GET) unregistering (last)
+2013-08-27 01:14:04,469+0000 INFO ReadBuffer RB-LR-Handler(tag: 534, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,469+0000 INFO GetFileHandler Handler(tag: 3259, GET) sending length: 1925, 1177694143
+2013-08-27 01:14:04,469+0000 INFO GetFileHandler Handler(tag: 3259, GET) unregistering (last)
+2013-08-27 01:14:04,469+0000 INFO RequestHandler Handler(tag: 535, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,470+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,470+0000 INFO RequestHandler Handler(tag: 3260, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,470+0000 INFO RequestHandler Handler(tag: 536, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,470+0000 INFO GetFileHandler Handler(tag: 3261, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,470+0000 INFO GetFileHandler Handler(tag: 3261, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,470+0000 INFO GetFileHandler Handler(tag: 3261, GET) -> 537
+2013-08-27 01:14:04,470+0000 INFO GetFileHandler Handler(tag: 537, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,470+0000 INFO GetFileHandler Handler(tag: 537, GET) reader: LR-Handler(tag: 537, GET)
+2013-08-27 01:14:04,470+0000 INFO GetFileHandler Handler(tag: 537, GET) sending length: 1925, 791817025
+2013-08-27 01:14:04,470+0000 INFO ReadBuffer RB-LR-Handler(tag: 537, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,470+0000 INFO ReadBuffer RB-LR-Handler(tag: 537, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,470+0000 INFO LocalIOProvider LR-Handler(tag: 537, GET) rbuf: RB-LR-Handler(tag: 537, GET)
+2013-08-27 01:14:04,470+0000 INFO GetFileHandler Handler(tag: 537, GET) unregistering (last)
+2013-08-27 01:14:04,470+0000 INFO ReadBuffer RB-LR-Handler(tag: 537, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,470+0000 INFO GetFileHandler Handler(tag: 3261, GET) sending length: 1925, 177386805
+2013-08-27 01:14:04,470+0000 INFO GetFileHandler Handler(tag: 3261, GET) unregistering (last)
+2013-08-27 01:14:04,470+0000 INFO RequestHandler Handler(tag: 538, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,470+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,471+0000 INFO RequestHandler Handler(tag: 3262, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,471+0000 INFO RequestHandler Handler(tag: 539, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,471+0000 INFO GetFileHandler Handler(tag: 3263, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,471+0000 INFO GetFileHandler Handler(tag: 3263, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,471+0000 INFO GetFileHandler Handler(tag: 3263, GET) -> 540
+2013-08-27 01:14:04,471+0000 INFO GetFileHandler Handler(tag: 540, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,471+0000 INFO GetFileHandler Handler(tag: 540, GET) reader: LR-Handler(tag: 540, GET)
+2013-08-27 01:14:04,471+0000 INFO GetFileHandler Handler(tag: 540, GET) sending length: 1925, 2029742554
+2013-08-27 01:14:04,471+0000 INFO ReadBuffer RB-LR-Handler(tag: 540, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,471+0000 INFO ReadBuffer RB-LR-Handler(tag: 540, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,471+0000 INFO LocalIOProvider LR-Handler(tag: 540, GET) rbuf: RB-LR-Handler(tag: 540, GET)
+2013-08-27 01:14:04,471+0000 INFO GetFileHandler Handler(tag: 540, GET) unregistering (last)
+2013-08-27 01:14:04,471+0000 INFO ReadBuffer RB-LR-Handler(tag: 540, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,471+0000 INFO GetFileHandler Handler(tag: 3263, GET) sending length: 1925, 114291584
+2013-08-27 01:14:04,471+0000 INFO GetFileHandler Handler(tag: 3263, GET) unregistering (last)
+2013-08-27 01:14:04,471+0000 INFO GetFileHandler Handler(tag: 507, GET) unregistering (last)
+2013-08-27 01:14:04,471+0000 INFO ReadBuffer RB-LR-Handler(tag: 507, GET) de-allocating 8 buffers
+2013-08-27 01:14:04,471+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,471+0000 INFO RequestHandler Handler(tag: 2712, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,471+0000 INFO RequestHandler Handler(tag: 541, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,471+0000 INFO GetFileHandler Handler(tag: 3245, GET) unregistering (last)
+2013-08-27 01:14:04,471+0000 INFO RequestHandler Handler(tag: 542, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,471+0000 INFO PutFileHandler Handler(tag: 2713, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/a/runampl-acztedel/wrapper.error
+2013-08-27 01:14:04,471+0000 INFO PutFileHandler Handler(tag: 2713, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-acztedel.error
+2013-08-27 01:14:04,471+0000 INFO PutFileCommand Sending Command(tag: 543, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,471+0000 INFO PutFileCommand Command(tag: 543, PUT) (t) sending data
+2013-08-27 01:14:04,472+0000 INFO PutFileHandler Handler(tag: 2713, PUT) -> 543
+2013-08-27 01:14:04,472+0000 INFO PutFileHandler Handler(tag: 543, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/a/runampl-acztedel/wrapper.error
+2013-08-27 01:14:04,472+0000 INFO PutFileHandler Handler(tag: 543, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-acztedel.error
+2013-08-27 01:14:04,472+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,472+0000 INFO RequestHandler Handler(tag: 3264, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,472+0000 INFO RequestHandler Handler(tag: 544, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,472+0000 INFO GetFileHandler Handler(tag: 3265, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,472+0000 INFO PutFileHandler Handler(tag: 543, PUT) Transfer done
+2013-08-27 01:14:04,472+0000 INFO RequestHandler Handler(tag: 543, PUT) unregistering (send)
+2013-08-27 01:14:04,472+0000 INFO GetFileHandler Handler(tag: 3265, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,472+0000 INFO PutFileHandler Handler(tag: 2713, PUT) Transfer done
+2013-08-27 01:14:04,472+0000 INFO GetFileHandler Handler(tag: 3265, GET) -> 545
+2013-08-27 01:14:04,472+0000 INFO RequestHandler Handler(tag: 2713, PUT) unregistering (send)
+2013-08-27 01:14:04,472+0000 INFO GetFileHandler Handler(tag: 545, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,472+0000 INFO GetFileHandler Handler(tag: 545, GET) reader: LR-Handler(tag: 545, GET)
+2013-08-27 01:14:04,472+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,472+0000 INFO GetFileHandler Handler(tag: 545, GET) sending length: 1925, 170381322
+2013-08-27 01:14:04,472+0000 INFO RequestHandler Handler(tag: 2714, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,472+0000 INFO ReadBuffer RB-LR-Handler(tag: 545, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,472+0000 INFO GetFileHandler Handler(tag: 3265, GET) sending length: 1925, 1003177403
+2013-08-27 01:14:04,472+0000 INFO ReadBuffer RB-LR-Handler(tag: 545, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,472+0000 INFO LocalIOProvider LR-Handler(tag: 545, GET) rbuf: RB-LR-Handler(tag: 545, GET)
+2013-08-27 01:14:04,472+0000 INFO PutFileHandler Handler(tag: 2715, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/g/runampl-gcztedel/wrapper.error
+2013-08-27 01:14:04,472+0000 INFO GetFileHandler Handler(tag: 545, GET) unregistering (last)
+2013-08-27 01:14:04,472+0000 INFO PutFileHandler Handler(tag: 2715, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-gcztedel.error
+2013-08-27 01:14:04,472+0000 INFO ReadBuffer RB-LR-Handler(tag: 545, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,472+0000 INFO GetFileHandler Handler(tag: 3265, GET) unregistering (last)
+2013-08-27 01:14:04,472+0000 INFO RequestHandler Handler(tag: 546, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,472+0000 INFO PutFileCommand Sending Command(tag: 547, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,472+0000 INFO PutFileCommand Command(tag: 547, PUT) (t) sending data
+2013-08-27 01:14:04,472+0000 INFO PutFileHandler Handler(tag: 547, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/g/runampl-gcztedel/wrapper.error
+2013-08-27 01:14:04,472+0000 INFO PutFileHandler Handler(tag: 2715, PUT) -> 547
+2013-08-27 01:14:04,472+0000 INFO PutFileHandler Handler(tag: 547, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-gcztedel.error
+2013-08-27 01:14:04,472+0000 INFO RequestHandler Handler(tag: 548, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,473+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,473+0000 INFO RequestHandler Handler(tag: 3266, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,473+0000 INFO RequestHandler Handler(tag: 549, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,473+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,473+0000 INFO PutFileHandler Handler(tag: 547, PUT) Transfer done
+2013-08-27 01:14:04,473+0000 INFO RequestHandler Handler(tag: 2716, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,473+0000 INFO RequestHandler Handler(tag: 550, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,473+0000 INFO RequestHandler Handler(tag: 547, PUT) unregistering (send)
+2013-08-27 01:14:04,473+0000 INFO PutFileHandler Handler(tag: 2715, PUT) Transfer done
+2013-08-27 01:14:04,473+0000 INFO RequestHandler Handler(tag: 2715, PUT) unregistering (send)
+2013-08-27 01:14:04,473+0000 INFO GetFileHandler Handler(tag: 3267, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,473+0000 INFO GetFileHandler Handler(tag: 3267, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,473+0000 INFO GetFileHandler Handler(tag: 3267, GET) -> 551
+2013-08-27 01:14:04,473+0000 INFO GetFileHandler Handler(tag: 551, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,473+0000 INFO PutFileHandler Handler(tag: 2717, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/a/runampl-acztedel/wrapper.log
+2013-08-27 01:14:04,473+0000 INFO GetFileHandler Handler(tag: 551, GET) reader: LR-Handler(tag: 551, GET)
+2013-08-27 01:14:04,473+0000 INFO PutFileHandler Handler(tag: 2717, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-acztedel.info
+2013-08-27 01:14:04,473+0000 INFO GetFileHandler Handler(tag: 551, GET) sending length: 1925, 1354255499
+2013-08-27 01:14:04,473+0000 INFO PutFileCommand Sending Command(tag: 552, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,473+0000 INFO ReadBuffer RB-LR-Handler(tag: 551, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,473+0000 INFO GetFileHandler Handler(tag: 3267, GET) sending length: 1925, 1940480787
+2013-08-27 01:14:04,473+0000 INFO PutFileCommand Command(tag: 552, PUT) (t) sending data
+2013-08-27 01:14:04,473+0000 INFO GetFileHandler Handler(tag: 551, GET) unregistering (last)
+2013-08-27 01:14:04,473+0000 INFO PutFileHandler Handler(tag: 2717, PUT) -> 552
+2013-08-27 01:14:04,473+0000 INFO GetFileHandler Handler(tag: 3267, GET) unregistering (last)
+2013-08-27 01:14:04,473+0000 INFO ReadBuffer RB-LR-Handler(tag: 551, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,473+0000 INFO LocalIOProvider LR-Handler(tag: 551, GET) rbuf: RB-LR-Handler(tag: 551, GET)
+2013-08-27 01:14:04,473+0000 INFO ReadBuffer RB-LR-Handler(tag: 551, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,473+0000 INFO PutFileHandler Handler(tag: 552, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/a/runampl-acztedel/wrapper.log
+2013-08-27 01:14:04,473+0000 INFO PutFileHandler Handler(tag: 552, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-acztedel.info
+2013-08-27 01:14:04,473+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,473+0000 INFO RequestHandler Handler(tag: 2718, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,473+0000 INFO RequestHandler Handler(tag: 553, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,473+0000 INFO PutFileHandler Handler(tag: 2719, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/g/runampl-gcztedel/wrapper.log
+2013-08-27 01:14:04,473+0000 INFO PutFileHandler Handler(tag: 2719, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-gcztedel.info
+2013-08-27 01:14:04,473+0000 INFO PutFileCommand Sending Command(tag: 554, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,473+0000 INFO PutFileCommand Command(tag: 554, PUT) (t) sending data
+2013-08-27 01:14:04,473+0000 INFO PutFileHandler Handler(tag: 2719, PUT) -> 554
+2013-08-27 01:14:04,473+0000 INFO PutFileHandler Handler(tag: 554, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/g/runampl-gcztedel/wrapper.log
+2013-08-27 01:14:04,473+0000 INFO PutFileHandler Handler(tag: 554, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-gcztedel.info
+2013-08-27 01:14:04,474+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,474+0000 INFO RequestHandler Handler(tag: 2720, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,474+0000 INFO RequestHandler Handler(tag: 555, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,474+0000 INFO PutFileHandler Handler(tag: 2721, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/l/runampl-lcztedel/wrapper.log
+2013-08-27 01:14:04,474+0000 INFO PutFileHandler Handler(tag: 2721, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-lcztedel.info
+2013-08-27 01:14:04,474+0000 INFO PutFileCommand Sending Command(tag: 556, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,474+0000 INFO PutFileCommand Command(tag: 556, PUT) (t) sending data
+2013-08-27 01:14:04,474+0000 INFO PutFileHandler Handler(tag: 2721, PUT) -> 556
+2013-08-27 01:14:04,474+0000 INFO PutFileHandler Handler(tag: 556, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/l/runampl-lcztedel/wrapper.log
+2013-08-27 01:14:04,474+0000 INFO PutFileHandler Handler(tag: 556, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-lcztedel.info
+2013-08-27 01:14:04,474+0000 INFO GetFileHandler Handler(tag: 3268, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:04,474+0000 INFO GetFileHandler Handler(tag: 3268, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:04,474+0000 INFO GetFileHandler Handler(tag: 3268, GET) -> 557
+2013-08-27 01:14:04,474+0000 INFO GetFileHandler Handler(tag: 557, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:04,474+0000 INFO GetFileHandler Handler(tag: 557, GET) reader: LR-Handler(tag: 557, GET)
+2013-08-27 01:14:04,474+0000 INFO GetFileHandler Handler(tag: 557, GET) sending length: 543, 444126246
+2013-08-27 01:14:04,474+0000 INFO ReadBuffer RB-LR-Handler(tag: 557, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:04,474+0000 INFO GetFileHandler Handler(tag: 3268, GET) sending length: 543, 1924143197
+2013-08-27 01:14:04,474+0000 INFO ReadBuffer RB-LR-Handler(tag: 557, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,474+0000 INFO LocalIOProvider LR-Handler(tag: 557, GET) rbuf: RB-LR-Handler(tag: 557, GET)
+2013-08-27 01:14:04,474+0000 INFO GetFileHandler Handler(tag: 557, GET) unregistering (last)
+2013-08-27 01:14:04,474+0000 INFO ReadBuffer RB-LR-Handler(tag: 557, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,475+0000 INFO PutFileHandler Handler(tag: 552, PUT) Transfer done
+2013-08-27 01:14:04,475+0000 INFO RequestHandler Handler(tag: 552, PUT) unregistering (send)
+2013-08-27 01:14:04,475+0000 INFO PutFileHandler Handler(tag: 2717, PUT) Transfer done
+2013-08-27 01:14:04,475+0000 INFO GetFileHandler Handler(tag: 3268, GET) unregistering (last)
+2013-08-27 01:14:04,475+0000 INFO RequestHandler Handler(tag: 2717, PUT) unregistering (send)
+2013-08-27 01:14:04,476+0000 INFO GetFileHandler Handler(tag: 3269, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:04,476+0000 INFO GetFileHandler Handler(tag: 3269, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:04,476+0000 INFO GetFileHandler Handler(tag: 3269, GET) -> 558
+2013-08-27 01:14:04,476+0000 INFO GetFileHandler Handler(tag: 558, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:04,476+0000 INFO GetFileHandler Handler(tag: 558, GET) reader: LR-Handler(tag: 558, GET)
+2013-08-27 01:14:04,476+0000 INFO GetFileHandler Handler(tag: 558, GET) sending length: 543, 684115901
+2013-08-27 01:14:04,476+0000 INFO GetFileHandler Handler(tag: 3269, GET) sending length: 543, 308502069
+2013-08-27 01:14:04,476+0000 INFO ReadBuffer RB-LR-Handler(tag: 558, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:04,476+0000 INFO ReadBuffer RB-LR-Handler(tag: 558, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,476+0000 INFO LocalIOProvider LR-Handler(tag: 558, GET) rbuf: RB-LR-Handler(tag: 558, GET)
+2013-08-27 01:14:04,476+0000 INFO GetFileHandler Handler(tag: 558, GET) unregistering (last)
+2013-08-27 01:14:04,476+0000 INFO ReadBuffer RB-LR-Handler(tag: 558, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,476+0000 INFO GetFileHandler Handler(tag: 3269, GET) unregistering (last)
+2013-08-27 01:14:04,477+0000 INFO PutFileHandler Handler(tag: 554, PUT) Transfer done
+2013-08-27 01:14:04,477+0000 INFO RequestHandler Handler(tag: 554, PUT) unregistering (send)
+2013-08-27 01:14:04,477+0000 INFO PutFileHandler Handler(tag: 2719, PUT) Transfer done
+2013-08-27 01:14:04,477+0000 INFO RequestHandler Handler(tag: 2719, PUT) unregistering (send)
+2013-08-27 01:14:04,477+0000 INFO GetFileHandler Handler(tag: 3270, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:04,477+0000 INFO GetFileHandler Handler(tag: 3270, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:04,477+0000 INFO GetFileHandler Handler(tag: 3270, GET) -> 559
+2013-08-27 01:14:04,477+0000 INFO GetFileHandler Handler(tag: 559, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:04,477+0000 INFO GetFileHandler Handler(tag: 559, GET) reader: LR-Handler(tag: 559, GET)
+2013-08-27 01:14:04,477+0000 INFO GetFileHandler Handler(tag: 559, GET) sending length: 543, 525230202
+2013-08-27 01:14:04,477+0000 INFO ReadBuffer RB-LR-Handler(tag: 559, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:04,477+0000 INFO GetFileHandler Handler(tag: 3270, GET) sending length: 543, 1386215844
+2013-08-27 01:14:04,477+0000 INFO ReadBuffer RB-LR-Handler(tag: 559, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,477+0000 INFO LocalIOProvider LR-Handler(tag: 559, GET) rbuf: RB-LR-Handler(tag: 559, GET)
+2013-08-27 01:14:04,477+0000 INFO GetFileHandler Handler(tag: 559, GET) unregistering (last)
+2013-08-27 01:14:04,477+0000 INFO GetFileHandler Handler(tag: 3270, GET) unregistering (last)
+2013-08-27 01:14:04,477+0000 INFO ReadBuffer RB-LR-Handler(tag: 559, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,478+0000 INFO GetFileHandler Handler(tag: 3271, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:04,478+0000 INFO GetFileHandler Handler(tag: 3271, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:04,479+0000 INFO GetFileHandler Handler(tag: 3271, GET) -> 560
+2013-08-27 01:14:04,479+0000 INFO GetFileHandler Handler(tag: 560, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:04,479+0000 INFO GetFileHandler Handler(tag: 560, GET) reader: LR-Handler(tag: 560, GET)
+2013-08-27 01:14:04,479+0000 INFO GetFileHandler Handler(tag: 560, GET) sending length: 543, 939480969
+2013-08-27 01:14:04,479+0000 INFO ReadBuffer RB-LR-Handler(tag: 560, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:04,479+0000 INFO GetFileHandler Handler(tag: 3271, GET) sending length: 543, 1556873239
+2013-08-27 01:14:04,479+0000 INFO ReadBuffer RB-LR-Handler(tag: 560, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,479+0000 INFO LocalIOProvider LR-Handler(tag: 560, GET) rbuf: RB-LR-Handler(tag: 560, GET)
+2013-08-27 01:14:04,479+0000 INFO GetFileHandler Handler(tag: 560, GET) unregistering (last)
+2013-08-27 01:14:04,479+0000 INFO GetFileHandler Handler(tag: 3271, GET) unregistering (last)
+2013-08-27 01:14:04,479+0000 INFO ReadBuffer RB-LR-Handler(tag: 560, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,484+0000 INFO PutFileHandler Handler(tag: 556, PUT) Transfer done
+2013-08-27 01:14:04,484+0000 INFO RequestHandler Handler(tag: 556, PUT) unregistering (send)
+2013-08-27 01:14:04,484+0000 INFO PutFileHandler Handler(tag: 2721, PUT) Transfer done
+2013-08-27 01:14:04,484+0000 INFO RequestHandler Handler(tag: 2721, PUT) unregistering (send)
+2013-08-27 01:14:04,484+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,484+0000 INFO RequestHandler Handler(tag: 561, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,484+0000 INFO RequestHandler Handler(tag: 2722, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,484+0000 INFO PutFileHandler Handler(tag: 2723, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/l/runampl-lcztedel/wrapper.error
+2013-08-27 01:14:04,484+0000 INFO PutFileHandler Handler(tag: 2723, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-lcztedel.error
+2013-08-27 01:14:04,484+0000 INFO PutFileCommand Sending Command(tag: 562, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,484+0000 INFO PutFileCommand Command(tag: 562, PUT) (t) sending data
+2013-08-27 01:14:04,484+0000 INFO PutFileHandler Handler(tag: 2723, PUT) -> 562
+2013-08-27 01:14:04,484+0000 INFO PutFileHandler Handler(tag: 562, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/l/runampl-lcztedel/wrapper.error
+2013-08-27 01:14:04,484+0000 INFO PutFileHandler Handler(tag: 562, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-lcztedel.error
+2013-08-27 01:14:04,486+0000 INFO PutFileHandler Handler(tag: 562, PUT) Transfer done
+2013-08-27 01:14:04,486+0000 INFO RequestHandler Handler(tag: 562, PUT) unregistering (send)
+2013-08-27 01:14:04,486+0000 INFO PutFileHandler Handler(tag: 2723, PUT) Transfer done
+2013-08-27 01:14:04,486+0000 INFO RequestHandler Handler(tag: 2723, PUT) unregistering (send)
+2013-08-27 01:14:04,504+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,504+0000 INFO RequestHandler Handler(tag: 563, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,504+0000 INFO RequestHandler Handler(tag: 2724, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,505+0000 INFO PutFileHandler Handler(tag: 2725, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/7/runampl-7cztedel/wrapper.error
+2013-08-27 01:14:04,505+0000 INFO PutFileHandler Handler(tag: 2725, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-7cztedel.error
+2013-08-27 01:14:04,505+0000 INFO PutFileCommand Sending Command(tag: 564, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,505+0000 INFO PutFileCommand Command(tag: 564, PUT) (t) sending data
+2013-08-27 01:14:04,505+0000 INFO PutFileHandler Handler(tag: 2725, PUT) -> 564
+2013-08-27 01:14:04,505+0000 INFO PutFileHandler Handler(tag: 564, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/7/runampl-7cztedel/wrapper.error
+2013-08-27 01:14:04,505+0000 INFO PutFileHandler Handler(tag: 564, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-7cztedel.error
+2013-08-27 01:14:04,505+0000 INFO PutFileHandler Handler(tag: 564, PUT) Transfer done
+2013-08-27 01:14:04,505+0000 INFO RequestHandler Handler(tag: 564, PUT) unregistering (send)
+2013-08-27 01:14:04,505+0000 INFO PutFileHandler Handler(tag: 2725, PUT) Transfer done
+2013-08-27 01:14:04,505+0000 INFO RequestHandler Handler(tag: 2725, PUT) unregistering (send)
+2013-08-27 01:14:04,505+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,505+0000 INFO RequestHandler Handler(tag: 2726, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,505+0000 INFO RequestHandler Handler(tag: 565, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,505+0000 INFO PutFileHandler Handler(tag: 2727, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/7/runampl-7cztedel/wrapper.log
+2013-08-27 01:14:04,506+0000 INFO PutFileHandler Handler(tag: 2727, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-7cztedel.info
+2013-08-27 01:14:04,506+0000 INFO PutFileCommand Sending Command(tag: 566, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,506+0000 INFO PutFileCommand Command(tag: 566, PUT) (t) sending data
+2013-08-27 01:14:04,506+0000 INFO PutFileHandler Handler(tag: 2727, PUT) -> 566
+2013-08-27 01:14:04,506+0000 INFO PutFileHandler Handler(tag: 566, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/7/runampl-7cztedel/wrapper.log
+2013-08-27 01:14:04,506+0000 INFO PutFileHandler Handler(tag: 566, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-7cztedel.info
+2013-08-27 01:14:04,507+0000 INFO PutFileHandler Handler(tag: 566, PUT) Transfer done
+2013-08-27 01:14:04,507+0000 INFO RequestHandler Handler(tag: 566, PUT) unregistering (send)
+2013-08-27 01:14:04,507+0000 INFO PutFileHandler Handler(tag: 2727, PUT) Transfer done
+2013-08-27 01:14:04,507+0000 INFO RequestHandler Handler(tag: 2727, PUT) unregistering (send)
+2013-08-27 01:14:04,509+0000 INFO GetFileHandler Handler(tag: 3272, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,509+0000 INFO GetFileHandler Handler(tag: 3272, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,509+0000 INFO GetFileHandler Handler(tag: 3272, GET) -> 567
+2013-08-27 01:14:04,509+0000 INFO GetFileHandler Handler(tag: 567, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,509+0000 INFO GetFileHandler Handler(tag: 567, GET) reader: LR-Handler(tag: 567, GET)
+2013-08-27 01:14:04,509+0000 INFO GetFileHandler Handler(tag: 567, GET) sending length: 14799449, 1347371049
+2013-08-27 01:14:04,509+0000 INFO ReadBuffer RB-LR-Handler(tag: 567, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,509+0000 INFO GetFileHandler Handler(tag: 3272, GET) sending length: 14799449, 50162928
+2013-08-27 01:14:04,509+0000 INFO ReadBuffer RB-LR-Handler(tag: 567, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,509+0000 INFO LocalIOProvider LR-Handler(tag: 567, GET) rbuf: RB-LR-Handler(tag: 567, GET)
+2013-08-27 01:14:04,514+0000 INFO ProxyIOProvider Command(tag: 567, GET) suspending
+2013-08-27 01:14:04,514+0000 INFO GetFileHandler Handler(tag: 567, GET) suspending
+2013-08-27 01:14:04,531+0000 INFO GetFileHandler Handler(tag: 3273, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,532+0000 INFO GetFileHandler Handler(tag: 3273, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,532+0000 INFO GetFileHandler Handler(tag: 3273, GET) -> 568
+2013-08-27 01:14:04,532+0000 INFO GetFileHandler Handler(tag: 568, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,532+0000 INFO GetFileHandler Handler(tag: 568, GET) reader: LR-Handler(tag: 568, GET)
+2013-08-27 01:14:04,532+0000 INFO GetFileHandler Handler(tag: 568, GET) sending length: 14799449, 802485119
+2013-08-27 01:14:04,532+0000 INFO ReadBuffer RB-LR-Handler(tag: 568, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,532+0000 INFO ReadBuffer RB-LR-Handler(tag: 568, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,532+0000 INFO GetFileHandler Handler(tag: 3273, GET) sending length: 14799449, 1226353932
+2013-08-27 01:14:04,532+0000 INFO LocalIOProvider LR-Handler(tag: 568, GET) rbuf: RB-LR-Handler(tag: 568, GET)
+2013-08-27 01:14:04,536+0000 INFO ProxyIOProvider Command(tag: 568, GET) suspending
+2013-08-27 01:14:04,536+0000 INFO GetFileHandler Handler(tag: 568, GET) suspending
+2013-08-27 01:14:04,537+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,537+0000 INFO RequestHandler Handler(tag: 2728, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,537+0000 INFO RequestHandler Handler(tag: 569, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,537+0000 INFO PutFileHandler Handler(tag: 2729, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/r/runampl-rcztedel/wrapper.log
+2013-08-27 01:14:04,537+0000 INFO PutFileHandler Handler(tag: 2729, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-rcztedel.info
+2013-08-27 01:14:04,537+0000 INFO PutFileCommand Sending Command(tag: 570, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,538+0000 INFO PutFileCommand Command(tag: 570, PUT) (t) sending data
+2013-08-27 01:14:04,538+0000 INFO PutFileHandler Handler(tag: 2729, PUT) -> 570
+2013-08-27 01:14:04,538+0000 INFO PutFileHandler Handler(tag: 570, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/r/runampl-rcztedel/wrapper.log
+2013-08-27 01:14:04,538+0000 INFO PutFileHandler Handler(tag: 570, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-rcztedel.info
+2013-08-27 01:14:04,538+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,538+0000 INFO RequestHandler Handler(tag: 2730, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,538+0000 INFO RequestHandler Handler(tag: 571, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,538+0000 INFO PutFileHandler Handler(tag: 2731, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/n/runampl-ncztedel/wrapper.error
+2013-08-27 01:14:04,538+0000 INFO PutFileHandler Handler(tag: 2731, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ncztedel.error
+2013-08-27 01:14:04,538+0000 INFO PutFileCommand Sending Command(tag: 572, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,538+0000 INFO PutFileCommand Command(tag: 572, PUT) (t) sending data
+2013-08-27 01:14:04,538+0000 INFO PutFileHandler Handler(tag: 2731, PUT) -> 572
+2013-08-27 01:14:04,539+0000 INFO PutFileHandler Handler(tag: 572, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/n/runampl-ncztedel/wrapper.error
+2013-08-27 01:14:04,539+0000 INFO PutFileHandler Handler(tag: 572, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ncztedel.error
+2013-08-27 01:14:04,539+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,539+0000 INFO RequestHandler Handler(tag: 2732, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,539+0000 INFO RequestHandler Handler(tag: 573, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,539+0000 INFO PutFileHandler Handler(tag: 2733, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/n/runampl-ncztedel/wrapper.log
+2013-08-27 01:14:04,539+0000 INFO PutFileHandler Handler(tag: 2733, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ncztedel.info
+2013-08-27 01:14:04,539+0000 INFO PutFileCommand Sending Command(tag: 574, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,539+0000 INFO PutFileCommand Command(tag: 574, PUT) (t) sending data
+2013-08-27 01:14:04,539+0000 INFO PutFileHandler Handler(tag: 2733, PUT) -> 574
+2013-08-27 01:14:04,539+0000 INFO PutFileHandler Handler(tag: 574, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/n/runampl-ncztedel/wrapper.log
+2013-08-27 01:14:04,539+0000 INFO PutFileHandler Handler(tag: 574, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ncztedel.info
+2013-08-27 01:14:04,539+0000 INFO PutFileHandler Handler(tag: 572, PUT) Transfer done
+2013-08-27 01:14:04,539+0000 INFO RequestHandler Handler(tag: 572, PUT) unregistering (send)
+2013-08-27 01:14:04,539+0000 INFO PutFileHandler Handler(tag: 2731, PUT) Transfer done
+2013-08-27 01:14:04,539+0000 INFO RequestHandler Handler(tag: 2731, PUT) unregistering (send)
+2013-08-27 01:14:04,539+0000 INFO PutFileHandler Handler(tag: 570, PUT) Transfer done
+2013-08-27 01:14:04,539+0000 INFO RequestHandler Handler(tag: 570, PUT) unregistering (send)
+2013-08-27 01:14:04,539+0000 INFO PutFileHandler Handler(tag: 2729, PUT) Transfer done
+2013-08-27 01:14:04,539+0000 INFO RequestHandler Handler(tag: 2729, PUT) unregistering (send)
+2013-08-27 01:14:04,539+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,540+0000 INFO RequestHandler Handler(tag: 2734, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,540+0000 INFO RequestHandler Handler(tag: 575, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,540+0000 INFO PutFileHandler Handler(tag: 2735, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/d/runampl-dcztedel/wrapper.log
+2013-08-27 01:14:04,540+0000 INFO PutFileHandler Handler(tag: 2735, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-dcztedel.info
+2013-08-27 01:14:04,540+0000 INFO PutFileCommand Sending Command(tag: 576, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,540+0000 INFO PutFileCommand Command(tag: 576, PUT) (t) sending data
+2013-08-27 01:14:04,540+0000 INFO PutFileHandler Handler(tag: 2735, PUT) -> 576
+2013-08-27 01:14:04,540+0000 INFO PutFileHandler Handler(tag: 576, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/d/runampl-dcztedel/wrapper.log
+2013-08-27 01:14:04,540+0000 INFO PutFileHandler Handler(tag: 576, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-dcztedel.info
+2013-08-27 01:14:04,540+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,540+0000 INFO RequestHandler Handler(tag: 2736, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,540+0000 INFO RequestHandler Handler(tag: 577, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,540+0000 INFO PutFileHandler Handler(tag: 2737, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/q/runampl-qcztedel/wrapper.error
+2013-08-27 01:14:04,540+0000 INFO PutFileHandler Handler(tag: 2737, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-qcztedel.error
+2013-08-27 01:14:04,540+0000 INFO PutFileCommand Sending Command(tag: 578, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,540+0000 INFO PutFileCommand Command(tag: 578, PUT) (t) sending data
+2013-08-27 01:14:04,540+0000 INFO PutFileHandler Handler(tag: 2737, PUT) -> 578
+2013-08-27 01:14:04,540+0000 INFO PutFileHandler Handler(tag: 578, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/q/runampl-qcztedel/wrapper.error
+2013-08-27 01:14:04,540+0000 INFO PutFileHandler Handler(tag: 578, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-qcztedel.error
+2013-08-27 01:14:04,540+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,540+0000 INFO RequestHandler Handler(tag: 2738, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,540+0000 INFO RequestHandler Handler(tag: 579, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,540+0000 INFO PutFileHandler Handler(tag: 2739, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/9/runampl-9cztedel/wrapper.log
+2013-08-27 01:14:04,540+0000 INFO PutFileHandler Handler(tag: 2739, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-9cztedel.info
+2013-08-27 01:14:04,540+0000 INFO PutFileCommand Sending Command(tag: 580, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,540+0000 INFO PutFileCommand Command(tag: 580, PUT) (t) sending data
+2013-08-27 01:14:04,540+0000 INFO PutFileHandler Handler(tag: 2739, PUT) -> 580
+2013-08-27 01:14:04,540+0000 INFO PutFileHandler Handler(tag: 578, PUT) Transfer done
+2013-08-27 01:14:04,540+0000 INFO PutFileHandler Handler(tag: 580, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/9/runampl-9cztedel/wrapper.log
+2013-08-27 01:14:04,540+0000 INFO PutFileHandler Handler(tag: 580, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-9cztedel.info
+2013-08-27 01:14:04,540+0000 INFO RequestHandler Handler(tag: 578, PUT) unregistering (send)
+2013-08-27 01:14:04,541+0000 INFO PutFileHandler Handler(tag: 2737, PUT) Transfer done
+2013-08-27 01:14:04,541+0000 INFO RequestHandler Handler(tag: 2737, PUT) unregistering (send)
+2013-08-27 01:14:04,541+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,541+0000 INFO RequestHandler Handler(tag: 2740, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,541+0000 INFO RequestHandler Handler(tag: 581, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,541+0000 INFO PutFileHandler Handler(tag: 2741, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/r/runampl-rcztedel/wrapper.error
+2013-08-27 01:14:04,541+0000 INFO PutFileHandler Handler(tag: 2741, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-rcztedel.error
+2013-08-27 01:14:04,541+0000 INFO PutFileCommand Sending Command(tag: 582, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,541+0000 INFO PutFileCommand Command(tag: 582, PUT) (t) sending data
+2013-08-27 01:14:04,541+0000 INFO PutFileHandler Handler(tag: 2741, PUT) -> 582
+2013-08-27 01:14:04,541+0000 INFO PutFileHandler Handler(tag: 582, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/r/runampl-rcztedel/wrapper.error
+2013-08-27 01:14:04,541+0000 INFO PutFileHandler Handler(tag: 582, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-rcztedel.error
+2013-08-27 01:14:04,541+0000 INFO PutFileHandler Handler(tag: 582, PUT) Transfer done
+2013-08-27 01:14:04,541+0000 INFO RequestHandler Handler(tag: 582, PUT) unregistering (send)
+2013-08-27 01:14:04,541+0000 INFO PutFileHandler Handler(tag: 2741, PUT) Transfer done
+2013-08-27 01:14:04,541+0000 INFO RequestHandler Handler(tag: 2741, PUT) unregistering (send)
+2013-08-27 01:14:04,547+0000 INFO PutFileHandler Handler(tag: 574, PUT) Transfer done
+2013-08-27 01:14:04,547+0000 INFO RequestHandler Handler(tag: 574, PUT) unregistering (send)
+2013-08-27 01:14:04,547+0000 INFO PutFileHandler Handler(tag: 2733, PUT) Transfer done
+2013-08-27 01:14:04,547+0000 INFO GetFileHandler Handler(tag: 3274, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,547+0000 INFO RequestHandler Handler(tag: 2733, PUT) unregistering (send)
+2013-08-27 01:14:04,547+0000 INFO GetFileHandler Handler(tag: 3274, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,547+0000 INFO GetFileHandler Handler(tag: 3274, GET) -> 583
+2013-08-27 01:14:04,548+0000 INFO GetFileHandler Handler(tag: 583, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,548+0000 INFO GetFileHandler Handler(tag: 583, GET) reader: LR-Handler(tag: 583, GET)
+2013-08-27 01:14:04,548+0000 INFO GetFileHandler Handler(tag: 583, GET) sending length: 14799449, 711210194
+2013-08-27 01:14:04,548+0000 INFO ReadBuffer RB-LR-Handler(tag: 583, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,548+0000 INFO GetFileHandler Handler(tag: 3274, GET) sending length: 14799449, 415751356
+2013-08-27 01:14:04,548+0000 INFO ReadBuffer RB-LR-Handler(tag: 583, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,548+0000 INFO LocalIOProvider LR-Handler(tag: 583, GET) rbuf: RB-LR-Handler(tag: 583, GET)
+2013-08-27 01:14:04,551+0000 INFO ProxyIOProvider Command(tag: 583, GET) suspending
+2013-08-27 01:14:04,551+0000 INFO GetFileHandler Handler(tag: 583, GET) suspending
+2013-08-27 01:14:04,555+0000 INFO PutFileHandler Handler(tag: 576, PUT) Transfer done
+2013-08-27 01:14:04,555+0000 INFO RequestHandler Handler(tag: 576, PUT) unregistering (send)
+2013-08-27 01:14:04,555+0000 INFO PutFileHandler Handler(tag: 2735, PUT) Transfer done
+2013-08-27 01:14:04,555+0000 INFO RequestHandler Handler(tag: 2735, PUT) unregistering (send)
+2013-08-27 01:14:04,556+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,556+0000 INFO RequestHandler Handler(tag: 2742, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,556+0000 INFO RequestHandler Handler(tag: 584, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,556+0000 INFO PutFileHandler Handler(tag: 2743, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/q/runampl-qcztedel/wrapper.log
+2013-08-27 01:14:04,556+0000 INFO PutFileHandler Handler(tag: 2743, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-qcztedel.info
+2013-08-27 01:14:04,556+0000 INFO PutFileCommand Sending Command(tag: 585, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,556+0000 INFO PutFileCommand Command(tag: 585, PUT) (t) sending data
+2013-08-27 01:14:04,556+0000 INFO PutFileHandler Handler(tag: 2743, PUT) -> 585
+2013-08-27 01:14:04,556+0000 INFO PutFileHandler Handler(tag: 585, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/q/runampl-qcztedel/wrapper.log
+2013-08-27 01:14:04,556+0000 INFO PutFileHandler Handler(tag: 585, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-qcztedel.info
+2013-08-27 01:14:04,557+0000 INFO PutFileHandler Handler(tag: 580, PUT) Transfer done
+2013-08-27 01:14:04,557+0000 INFO RequestHandler Handler(tag: 580, PUT) unregistering (send)
+2013-08-27 01:14:04,557+0000 INFO PutFileHandler Handler(tag: 2739, PUT) Transfer done
+2013-08-27 01:14:04,557+0000 INFO RequestHandler Handler(tag: 2739, PUT) unregistering (send)
+2013-08-27 01:14:04,558+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,558+0000 INFO RequestHandler Handler(tag: 2744, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,558+0000 INFO RequestHandler Handler(tag: 586, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,558+0000 INFO PutFileHandler Handler(tag: 2745, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/d/runampl-dcztedel/wrapper.error
+2013-08-27 01:14:04,558+0000 INFO PutFileHandler Handler(tag: 2745, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-dcztedel.error
+2013-08-27 01:14:04,558+0000 INFO PutFileCommand Sending Command(tag: 587, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,558+0000 INFO PutFileCommand Command(tag: 587, PUT) (t) sending data
+2013-08-27 01:14:04,558+0000 INFO PutFileHandler Handler(tag: 2745, PUT) -> 587
+2013-08-27 01:14:04,558+0000 INFO PutFileHandler Handler(tag: 587, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/d/runampl-dcztedel/wrapper.error
+2013-08-27 01:14:04,558+0000 INFO PutFileHandler Handler(tag: 587, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-dcztedel.error
+2013-08-27 01:14:04,558+0000 INFO PutFileHandler Handler(tag: 587, PUT) Transfer done
+2013-08-27 01:14:04,558+0000 INFO RequestHandler Handler(tag: 587, PUT) unregistering (send)
+2013-08-27 01:14:04,558+0000 INFO PutFileHandler Handler(tag: 2745, PUT) Transfer done
+2013-08-27 01:14:04,558+0000 INFO RequestHandler Handler(tag: 2745, PUT) unregistering (send)
+2013-08-27 01:14:04,561+0000 INFO GetFileHandler Handler(tag: 3275, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,561+0000 INFO GetFileHandler Handler(tag: 3275, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,561+0000 INFO GetFileHandler Handler(tag: 3275, GET) -> 588
+2013-08-27 01:14:04,561+0000 INFO GetFileHandler Handler(tag: 588, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,561+0000 INFO GetFileHandler Handler(tag: 588, GET) reader: LR-Handler(tag: 588, GET)
+2013-08-27 01:14:04,561+0000 INFO GetFileHandler Handler(tag: 588, GET) sending length: 14799449, 1999234218
+2013-08-27 01:14:04,561+0000 INFO ReadBuffer RB-LR-Handler(tag: 588, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,561+0000 INFO GetFileHandler Handler(tag: 3275, GET) sending length: 14799449, 1600360964
+2013-08-27 01:14:04,561+0000 INFO ReadBuffer RB-LR-Handler(tag: 588, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,561+0000 INFO LocalIOProvider LR-Handler(tag: 588, GET) rbuf: RB-LR-Handler(tag: 588, GET)
+2013-08-27 01:14:04,565+0000 INFO ProxyIOProvider Command(tag: 588, GET) suspending
+2013-08-27 01:14:04,565+0000 INFO GetFileHandler Handler(tag: 588, GET) suspending
+2013-08-27 01:14:04,566+0000 INFO PutFileHandler Handler(tag: 585, PUT) Transfer done
+2013-08-27 01:14:04,566+0000 INFO RequestHandler Handler(tag: 585, PUT) unregistering (send)
+2013-08-27 01:14:04,566+0000 INFO PutFileHandler Handler(tag: 2743, PUT) Transfer done
+2013-08-27 01:14:04,566+0000 INFO RequestHandler Handler(tag: 2743, PUT) unregistering (send)
+2013-08-27 01:14:04,573+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,573+0000 INFO RequestHandler Handler(tag: 2746, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,573+0000 INFO RequestHandler Handler(tag: 589, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,574+0000 INFO PutFileHandler Handler(tag: 2747, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/9/runampl-9cztedel/wrapper.error
+2013-08-27 01:14:04,574+0000 INFO PutFileHandler Handler(tag: 2747, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-9cztedel.error
+2013-08-27 01:14:04,574+0000 INFO PutFileCommand Sending Command(tag: 590, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,574+0000 INFO PutFileCommand Command(tag: 590, PUT) (t) sending data
+2013-08-27 01:14:04,574+0000 INFO PutFileHandler Handler(tag: 2747, PUT) -> 590
+2013-08-27 01:14:04,574+0000 INFO PutFileHandler Handler(tag: 590, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/9/runampl-9cztedel/wrapper.error
+2013-08-27 01:14:04,574+0000 INFO PutFileHandler Handler(tag: 590, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-9cztedel.error
+2013-08-27 01:14:04,574+0000 INFO PutFileHandler Handler(tag: 590, PUT) Transfer done
+2013-08-27 01:14:04,574+0000 INFO RequestHandler Handler(tag: 590, PUT) unregistering (send)
+2013-08-27 01:14:04,574+0000 INFO PutFileHandler Handler(tag: 2747, PUT) Transfer done
+2013-08-27 01:14:04,574+0000 INFO RequestHandler Handler(tag: 2747, PUT) unregistering (send)
+2013-08-27 01:14:04,574+0000 INFO GetFileHandler Handler(tag: 3276, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,575+0000 INFO GetFileHandler Handler(tag: 3276, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,575+0000 INFO GetFileHandler Handler(tag: 3276, GET) -> 591
+2013-08-27 01:14:04,575+0000 INFO GetFileHandler Handler(tag: 591, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,575+0000 INFO GetFileHandler Handler(tag: 591, GET) reader: LR-Handler(tag: 591, GET)
+2013-08-27 01:14:04,575+0000 INFO GetFileHandler Handler(tag: 591, GET) sending length: 14799449, 764557967
+2013-08-27 01:14:04,575+0000 INFO ReadBuffer RB-LR-Handler(tag: 591, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,575+0000 INFO GetFileHandler Handler(tag: 3276, GET) sending length: 14799449, 1903563622
+2013-08-27 01:14:04,575+0000 INFO ReadBuffer RB-LR-Handler(tag: 591, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,575+0000 INFO LocalIOProvider LR-Handler(tag: 591, GET) rbuf: RB-LR-Handler(tag: 591, GET)
+2013-08-27 01:14:04,581+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,582+0000 INFO RequestHandler Handler(tag: 2748, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,582+0000 INFO RequestHandler Handler(tag: 592, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,582+0000 INFO PutFileHandler Handler(tag: 2749, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/e/runampl-ecztedel/wrapper.error
+2013-08-27 01:14:04,582+0000 INFO PutFileHandler Handler(tag: 2749, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ecztedel.error
+2013-08-27 01:14:04,582+0000 INFO PutFileCommand Sending Command(tag: 593, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,582+0000 INFO PutFileCommand Command(tag: 593, PUT) (t) sending data
+2013-08-27 01:14:04,582+0000 INFO PutFileHandler Handler(tag: 2749, PUT) -> 593
+2013-08-27 01:14:04,582+0000 INFO PutFileHandler Handler(tag: 593, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/e/runampl-ecztedel/wrapper.error
+2013-08-27 01:14:04,582+0000 INFO PutFileHandler Handler(tag: 593, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ecztedel.error
+2013-08-27 01:14:04,582+0000 INFO PutFileHandler Handler(tag: 593, PUT) Transfer done
+2013-08-27 01:14:04,582+0000 INFO RequestHandler Handler(tag: 593, PUT) unregistering (send)
+2013-08-27 01:14:04,583+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:04,583+0000 INFO RequestHandler Handler(tag: 2750, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,583+0000 INFO RequestHandler Handler(tag: 594, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,583+0000 INFO PutFileHandler Handler(tag: 2751, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/e/runampl-ecztedel/wrapper.log
+2013-08-27 01:14:04,583+0000 INFO PutFileHandler Handler(tag: 2751, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ecztedel.info
+2013-08-27 01:14:04,583+0000 INFO PutFileCommand Sending Command(tag: 595, PUT) (t) on cpipe://1
+2013-08-27 01:14:04,583+0000 INFO PutFileCommand Command(tag: 595, PUT) (t) sending data
+2013-08-27 01:14:04,583+0000 INFO PutFileHandler Handler(tag: 2751, PUT) -> 595
+2013-08-27 01:14:04,583+0000 INFO PutFileHandler Handler(tag: 595, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/e/runampl-ecztedel/wrapper.log
+2013-08-27 01:14:04,583+0000 INFO PutFileHandler Handler(tag: 595, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-ecztedel.info
+2013-08-27 01:14:04,585+0000 INFO PutFileHandler Handler(tag: 595, PUT) Transfer done
+2013-08-27 01:14:04,585+0000 INFO RequestHandler Handler(tag: 595, PUT) unregistering (send)
+2013-08-27 01:14:04,585+0000 INFO PutFileHandler Handler(tag: 2749, PUT) Transfer done
+2013-08-27 01:14:04,585+0000 INFO RequestHandler Handler(tag: 2749, PUT) unregistering (send)
+2013-08-27 01:14:04,587+0000 INFO PutFileHandler Handler(tag: 2751, PUT) Transfer done
+2013-08-27 01:14:04,587+0000 INFO RequestHandler Handler(tag: 2751, PUT) unregistering (send)
+2013-08-27 01:14:04,591+0000 INFO GetFileHandler Handler(tag: 3277, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,591+0000 INFO GetFileHandler Handler(tag: 3277, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,591+0000 INFO GetFileHandler Handler(tag: 3277, GET) -> 596
+2013-08-27 01:14:04,591+0000 INFO GetFileHandler Handler(tag: 596, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,591+0000 INFO GetFileHandler Handler(tag: 596, GET) reader: LR-Handler(tag: 596, GET)
+2013-08-27 01:14:04,591+0000 INFO GetFileHandler Handler(tag: 596, GET) sending length: 14799449, 622473303
+2013-08-27 01:14:04,591+0000 INFO ReadBuffer RB-LR-Handler(tag: 596, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,591+0000 INFO ReadBuffer RB-LR-Handler(tag: 596, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,591+0000 INFO LocalIOProvider LR-Handler(tag: 596, GET) rbuf: RB-LR-Handler(tag: 596, GET)
+2013-08-27 01:14:04,595+0000 INFO GetFileHandler Handler(tag: 3277, GET) sending length: 14799449, 976656080
+2013-08-27 01:14:04,604+0000 INFO GetFileHandler Handler(tag: 3278, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,605+0000 INFO GetFileHandler Handler(tag: 3278, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,605+0000 INFO GetFileHandler Handler(tag: 3278, GET) -> 597
+2013-08-27 01:14:04,605+0000 INFO GetFileHandler Handler(tag: 597, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,605+0000 INFO GetFileHandler Handler(tag: 597, GET) reader: LR-Handler(tag: 597, GET)
+2013-08-27 01:14:04,605+0000 INFO GetFileHandler Handler(tag: 597, GET) sending length: 14799449, 1159158460
+2013-08-27 01:14:04,605+0000 INFO ReadBuffer RB-LR-Handler(tag: 597, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,605+0000 INFO ReadBuffer RB-LR-Handler(tag: 597, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,605+0000 INFO LocalIOProvider LR-Handler(tag: 597, GET) rbuf: RB-LR-Handler(tag: 597, GET)
+2013-08-27 01:14:04,612+0000 INFO GetFileHandler Handler(tag: 3278, GET) sending length: 14799449, 2009698607
+2013-08-27 01:14:04,618+0000 INFO ProxyIOProvider Command(tag: 567, GET) resuming
+2013-08-27 01:14:04,618+0000 INFO GetFileHandler Handler(tag: 567, GET) resuming
+2013-08-27 01:14:04,625+0000 INFO GetFileHandler Handler(tag: 3279, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,625+0000 INFO GetFileHandler Handler(tag: 3279, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,625+0000 INFO GetFileHandler Handler(tag: 3279, GET) -> 598
+2013-08-27 01:14:04,625+0000 INFO GetFileHandler Handler(tag: 598, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,625+0000 INFO GetFileHandler Handler(tag: 598, GET) reader: LR-Handler(tag: 598, GET)
+2013-08-27 01:14:04,625+0000 INFO GetFileHandler Handler(tag: 598, GET) sending length: 14799449, 1286734220
+2013-08-27 01:14:04,625+0000 INFO ReadBuffer RB-LR-Handler(tag: 598, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,625+0000 INFO ReadBuffer RB-LR-Handler(tag: 598, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,625+0000 INFO LocalIOProvider LR-Handler(tag: 598, GET) rbuf: RB-LR-Handler(tag: 598, GET)
+2013-08-27 01:14:04,639+0000 INFO GetFileHandler Handler(tag: 3279, GET) sending length: 14799449, 487311849
+2013-08-27 01:14:04,646+0000 INFO GetFileHandler Handler(tag: 3280, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,646+0000 INFO GetFileHandler Handler(tag: 3280, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,646+0000 INFO GetFileHandler Handler(tag: 3280, GET) -> 599
+2013-08-27 01:14:04,646+0000 INFO GetFileHandler Handler(tag: 599, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,646+0000 INFO GetFileHandler Handler(tag: 599, GET) reader: LR-Handler(tag: 599, GET)
+2013-08-27 01:14:04,646+0000 INFO GetFileHandler Handler(tag: 599, GET) sending length: 14799449, 1617949867
+2013-08-27 01:14:04,647+0000 INFO ReadBuffer RB-LR-Handler(tag: 599, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,647+0000 INFO ReadBuffer RB-LR-Handler(tag: 599, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,647+0000 INFO LocalIOProvider LR-Handler(tag: 599, GET) rbuf: RB-LR-Handler(tag: 599, GET)
+2013-08-27 01:14:04,652+0000 INFO GetFileHandler Handler(tag: 3281, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,652+0000 INFO GetFileHandler Handler(tag: 3281, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,652+0000 INFO GetFileHandler Handler(tag: 3281, GET) -> 600
+2013-08-27 01:14:04,652+0000 INFO GetFileHandler Handler(tag: 600, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,652+0000 INFO GetFileHandler Handler(tag: 600, GET) reader: LR-Handler(tag: 600, GET)
+2013-08-27 01:14:04,652+0000 INFO GetFileHandler Handler(tag: 600, GET) sending length: 148937, 1786083621
+2013-08-27 01:14:04,652+0000 INFO ReadBuffer RB-LR-Handler(tag: 600, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:04,652+0000 INFO ReadBuffer RB-LR-Handler(tag: 600, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:04,652+0000 INFO LocalIOProvider LR-Handler(tag: 600, GET) rbuf: RB-LR-Handler(tag: 600, GET)
+2013-08-27 01:14:04,652+0000 INFO GetFileHandler Handler(tag: 600, GET) unregistering (last)
+2013-08-27 01:14:04,652+0000 INFO ReadBuffer RB-LR-Handler(tag: 600, GET) de-allocating 5 buffers
+2013-08-27 01:14:04,652+0000 INFO GetFileHandler Handler(tag: 3282, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,652+0000 INFO GetFileHandler Handler(tag: 3282, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,652+0000 INFO GetFileHandler Handler(tag: 3282, GET) -> 601
+2013-08-27 01:14:04,652+0000 INFO GetFileHandler Handler(tag: 601, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,652+0000 INFO GetFileHandler Handler(tag: 601, GET) reader: LR-Handler(tag: 601, GET)
+2013-08-27 01:14:04,652+0000 INFO GetFileHandler Handler(tag: 601, GET) sending length: 14799449, 2029537893
+2013-08-27 01:14:04,652+0000 INFO ReadBuffer RB-LR-Handler(tag: 601, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,652+0000 INFO ReadBuffer RB-LR-Handler(tag: 601, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,652+0000 INFO LocalIOProvider LR-Handler(tag: 601, GET) rbuf: RB-LR-Handler(tag: 601, GET)
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 3283, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 3283, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 3283, GET) -> 602
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 602, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 3284, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 3284, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 602, GET) reader: LR-Handler(tag: 602, GET)
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 3284, GET) -> 603
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 602, GET) sending length: 14799449, 172249620
+2013-08-27 01:14:04,658+0000 INFO ReadBuffer RB-LR-Handler(tag: 602, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,658+0000 INFO ReadBuffer RB-LR-Handler(tag: 602, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,658+0000 INFO LocalIOProvider LR-Handler(tag: 602, GET) rbuf: RB-LR-Handler(tag: 602, GET)
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 3285, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 603, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 3285, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 603, GET) reader: LR-Handler(tag: 603, GET)
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 3285, GET) -> 604
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 603, GET) sending length: 2093, 50038282
+2013-08-27 01:14:04,658+0000 INFO ReadBuffer RB-LR-Handler(tag: 603, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:04,658+0000 INFO ReadBuffer RB-LR-Handler(tag: 603, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,658+0000 INFO LocalIOProvider LR-Handler(tag: 603, GET) rbuf: RB-LR-Handler(tag: 603, GET)
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 3286, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 604, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 603, GET) unregistering (last)
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 3286, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 604, GET) reader: LR-Handler(tag: 604, GET)
+2013-08-27 01:14:04,658+0000 INFO ReadBuffer RB-LR-Handler(tag: 603, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 3286, GET) -> 605
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 604, GET) sending length: 2093, 2011685390
+2013-08-27 01:14:04,658+0000 INFO ReadBuffer RB-LR-Handler(tag: 604, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:04,658+0000 INFO ReadBuffer RB-LR-Handler(tag: 604, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,658+0000 INFO LocalIOProvider LR-Handler(tag: 604, GET) rbuf: RB-LR-Handler(tag: 604, GET)
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 604, GET) unregistering (last)
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 3287, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 605, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:04,658+0000 INFO ReadBuffer RB-LR-Handler(tag: 604, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 3287, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 605, GET) reader: LR-Handler(tag: 605, GET)
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 3287, GET) -> 606
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 605, GET) sending length: 2093, 1375512148
+2013-08-27 01:14:04,658+0000 INFO ReadBuffer RB-LR-Handler(tag: 605, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:04,658+0000 INFO ReadBuffer RB-LR-Handler(tag: 605, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,658+0000 INFO LocalIOProvider LR-Handler(tag: 605, GET) rbuf: RB-LR-Handler(tag: 605, GET)
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 605, GET) unregistering (last)
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 606, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:04,658+0000 INFO ReadBuffer RB-LR-Handler(tag: 605, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 606, GET) reader: LR-Handler(tag: 606, GET)
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 606, GET) sending length: 2093, 1099459077
+2013-08-27 01:14:04,658+0000 INFO ReadBuffer RB-LR-Handler(tag: 606, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:04,658+0000 INFO ReadBuffer RB-LR-Handler(tag: 606, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,658+0000 INFO LocalIOProvider LR-Handler(tag: 606, GET) rbuf: RB-LR-Handler(tag: 606, GET)
+2013-08-27 01:14:04,658+0000 INFO GetFileHandler Handler(tag: 606, GET) unregistering (last)
+2013-08-27 01:14:04,659+0000 INFO ReadBuffer RB-LR-Handler(tag: 606, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,667+0000 INFO GetFileHandler Handler(tag: 3280, GET) sending length: 14799449, 306031668
+2013-08-27 01:14:04,676+0000 INFO GetFileHandler Handler(tag: 3281, GET) sending length: 148937, 1525752316
+2013-08-27 01:14:04,678+0000 INFO GetFileHandler Handler(tag: 3281, GET) unregistering (last)
+2013-08-27 01:14:04,678+0000 INFO GetFileHandler Handler(tag: 3282, GET) sending length: 14799449, 1934782336
+2013-08-27 01:14:04,688+0000 INFO GetFileHandler Handler(tag: 3283, GET) sending length: 14799449, 34162781
+2013-08-27 01:14:04,691+0000 INFO GetFileHandler Handler(tag: 3284, GET) sending length: 2093, 1394918157
+2013-08-27 01:14:04,694+0000 INFO GetFileHandler Handler(tag: 3284, GET) unregistering (last)
+2013-08-27 01:14:04,694+0000 INFO GetFileHandler Handler(tag: 3285, GET) sending length: 2093, 26890590
+2013-08-27 01:14:04,695+0000 INFO GetFileHandler Handler(tag: 3285, GET) unregistering (last)
+2013-08-27 01:14:04,695+0000 INFO GetFileHandler Handler(tag: 3286, GET) sending length: 2093, 1568661094
+2013-08-27 01:14:04,695+0000 INFO GetFileHandler Handler(tag: 3286, GET) unregistering (last)
+2013-08-27 01:14:04,695+0000 INFO GetFileHandler Handler(tag: 3287, GET) sending length: 2093, 1398010536
+2013-08-27 01:14:04,696+0000 INFO GetFileHandler Handler(tag: 3287, GET) unregistering (last)
+2013-08-27 01:14:04,747+0000 INFO ProxyIOProvider Command(tag: 568, GET) resuming
+2013-08-27 01:14:04,748+0000 INFO GetFileHandler Handler(tag: 568, GET) resuming
+2013-08-27 01:14:04,790+0000 INFO GetFileHandler Handler(tag: 2752, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,790+0000 INFO GetFileHandler Handler(tag: 2752, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,790+0000 INFO GetFileHandler Handler(tag: 2752, GET) -> 607
+2013-08-27 01:14:04,790+0000 INFO GetFileHandler Handler(tag: 607, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,791+0000 INFO GetFileHandler Handler(tag: 607, GET) reader: LR-Handler(tag: 607, GET)
+2013-08-27 01:14:04,791+0000 INFO GetFileHandler Handler(tag: 607, GET) sending length: 148937, 1516729653
+2013-08-27 01:14:04,791+0000 INFO ReadBuffer RB-LR-Handler(tag: 607, GET) will ask for 5 buffers for a size of 148937
+2013-08-27 01:14:04,791+0000 INFO ReadBuffer RB-LR-Handler(tag: 607, GET) actual allocated buffers 5(0 queued)
+2013-08-27 01:14:04,791+0000 INFO LocalIOProvider LR-Handler(tag: 607, GET) rbuf: RB-LR-Handler(tag: 607, GET)
+2013-08-27 01:14:04,791+0000 INFO GetFileHandler Handler(tag: 607, GET) unregistering (last)
+2013-08-27 01:14:04,791+0000 INFO ReadBuffer RB-LR-Handler(tag: 607, GET) de-allocating 5 buffers
+2013-08-27 01:14:04,791+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,791+0000 INFO Cpu 0827-1301520-000001:2 jobTerminated
+2013-08-27 01:14:04,791+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=2
+2013-08-27 01:14:04,791+0000 INFO RequestHandler Handler(tag: 2753, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,791+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=2 Cpus sleeping: 1
+2013-08-27 01:14:04,791+0000 DEBUG Cpu 0827-1301520-000001:2 sleeping
+2013-08-27 01:14:04,791+0000 INFO RequestHandler Handler(tag: 608, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,792+0000 INFO RequestHandler Handler(tag: 609, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,792+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,792+0000 INFO RequestHandler Handler(tag: 2754, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,792+0000 INFO RequestHandler Handler(tag: 610, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,792+0000 INFO GetFileHandler Handler(tag: 2755, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,792+0000 INFO GetFileHandler Handler(tag: 2755, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,792+0000 INFO GetFileHandler Handler(tag: 2755, GET) -> 611
+2013-08-27 01:14:04,792+0000 INFO GetFileHandler Handler(tag: 611, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,792+0000 INFO GetFileHandler Handler(tag: 611, GET) reader: LR-Handler(tag: 611, GET)
+2013-08-27 01:14:04,792+0000 INFO GetFileHandler Handler(tag: 611, GET) sending length: 1925, 915935524
+2013-08-27 01:14:04,792+0000 INFO ReadBuffer RB-LR-Handler(tag: 611, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,792+0000 INFO ReadBuffer RB-LR-Handler(tag: 611, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,792+0000 INFO LocalIOProvider LR-Handler(tag: 611, GET) rbuf: RB-LR-Handler(tag: 611, GET)
+2013-08-27 01:14:04,792+0000 INFO GetFileHandler Handler(tag: 611, GET) unregistering (last)
+2013-08-27 01:14:04,792+0000 INFO ReadBuffer RB-LR-Handler(tag: 611, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,793+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:04,793+0000 INFO RequestHandler Handler(tag: 612, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,793+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,793+0000 INFO RequestHandler Handler(tag: 2756, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,793+0000 INFO RequestHandler Handler(tag: 613, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,793+0000 INFO GetFileHandler Handler(tag: 2757, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,793+0000 INFO GetFileHandler Handler(tag: 2757, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,794+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-jcztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,794+0000 INFO GetFileHandler Handler(tag: 2757, GET) -> 614
+2013-08-27 01:14:04,794+0000 INFO GetFileHandler Handler(tag: 614, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,794+0000 INFO GetFileHandler Handler(tag: 614, GET) reader: LR-Handler(tag: 614, GET)
+2013-08-27 01:14:04,794+0000 INFO GetFileHandler Handler(tag: 614, GET) sending length: 1925, 364847502
+2013-08-27 01:14:04,794+0000 INFO ReadBuffer RB-LR-Handler(tag: 614, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,794+0000 INFO ReadBuffer RB-LR-Handler(tag: 614, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,794+0000 INFO LocalIOProvider LR-Handler(tag: 614, GET) rbuf: RB-LR-Handler(tag: 614, GET)
+2013-08-27 01:14:04,794+0000 INFO GetFileHandler Handler(tag: 614, GET) unregistering (last)
+2013-08-27 01:14:04,794+0000 INFO ReadBuffer RB-LR-Handler(tag: 614, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,794+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,794+0000 INFO Cpu 0827-1301520-000001:4 jobTerminated
+2013-08-27 01:14:04,794+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=4
+2013-08-27 01:14:04,794+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=4 Cpus sleeping: 2
+2013-08-27 01:14:04,794+0000 INFO RequestHandler Handler(tag: 2758, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,794+0000 DEBUG Cpu 0827-1301520-000001:4 sleeping
+2013-08-27 01:14:04,794+0000 INFO RequestHandler Handler(tag: 615, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,794+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,794+0000 INFO Cpu 0827-1301520-000001:6 jobTerminated
+2013-08-27 01:14:04,794+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=6
+2013-08-27 01:14:04,794+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=6 Cpus sleeping: 3
+2013-08-27 01:14:04,794+0000 INFO RequestHandler Handler(tag: 2759, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,794+0000 DEBUG Cpu 0827-1301520-000001:6 sleeping
+2013-08-27 01:14:04,794+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-ldztedel thread=R-42-0-1x2-13-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,795+0000 INFO RequestHandler Handler(tag: 616, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,795+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,795+0000 INFO Cpu 0827-1301520-000001:3 jobTerminated
+2013-08-27 01:14:04,795+0000 DEBUG swift JOB_START jobid=runampl-ldztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0013.out, outdir/xhat_l20000_0001.0013.out, obj_outdir/obj_out_l0000_0001.0013.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0013.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/l/runampl-ldztedel host=midway
+2013-08-27 01:14:04,795+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=3
+2013-08-27 01:14:04,795+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=3 Cpus sleeping: 4
+2013-08-27 01:14:04,795+0000 INFO RequestHandler Handler(tag: 2760, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,795+0000 DEBUG Cpu 0827-1301520-000001:3 sleeping
+2013-08-27 01:14:04,795+0000 INFO RequestHandler Handler(tag: 617, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,795+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,795+0000 INFO Cpu 0827-1301520-000001:9 jobTerminated
+2013-08-27 01:14:04,795+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=9
+2013-08-27 01:14:04,795+0000 INFO RequestHandler Handler(tag: 2761, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,795+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=9 Cpus sleeping: 5
+2013-08-27 01:14:04,795+0000 DEBUG Cpu 0827-1301520-000001:9 sleeping
+2013-08-27 01:14:04,795+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:04,795+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:04,795+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,796+0000 INFO Cpu 0827-1301520-000001:12 jobTerminated
+2013-08-27 01:14:04,796+0000 INFO RequestHandler Handler(tag: 618, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,796+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=12
+2013-08-27 01:14:04,796+0000 INFO RequestHandler Handler(tag: 2762, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,796+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,796+0000 INFO RequestHandler Handler(tag: 619, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,796+0000 INFO Cpu 0827-1301520-000001:10 jobTerminated
+2013-08-27 01:14:04,796+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=10
+2013-08-27 01:14:04,796+0000 INFO RequestHandler Handler(tag: 2763, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,796+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=12 Cpus sleeping: 6
+2013-08-27 01:14:04,796+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-8cztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,796+0000 DEBUG Cpu 0827-1301520-000001:12 sleeping
+2013-08-27 01:14:04,796+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=10 Cpus sleeping: 7
+2013-08-27 01:14:04,796+0000 DEBUG Cpu 0827-1301520-000001:10 sleeping
+2013-08-27 01:14:04,796+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:04,796+0000 INFO RequestHandler Handler(tag: 620, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,797+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,797+0000 INFO LateBindingScheduler jobs queued: 3
+2013-08-27 01:14:04,797+0000 INFO Cpu 0827-1301520-000001:8 jobTerminated
+2013-08-27 01:14:04,797+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=8
+2013-08-27 01:14:04,797+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=8 Cpus sleeping: 8
+2013-08-27 01:14:04,797+0000 INFO RequestHandler Handler(tag: 2764, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,797+0000 DEBUG Cpu 0827-1301520-000001:8 sleeping
+2013-08-27 01:14:04,797+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-ocztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,797+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,797+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-acztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,797+0000 INFO Cpu 0827-1301520-000001:15 jobTerminated
+2013-08-27 01:14:04,797+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=15
+2013-08-27 01:14:04,797+0000 INFO RequestHandler Handler(tag: 621, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,798+0000 INFO RequestHandler Handler(tag: 2765, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,798+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-mdztedel thread=R-42-0-1x2-9-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,798+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=15 Cpus sleeping: 9
+2013-08-27 01:14:04,798+0000 DEBUG Cpu 0827-1301520-000001:15 sleeping
+2013-08-27 01:14:04,798+0000 INFO LateBindingScheduler jobs queued: 2
+2013-08-27 01:14:04,798+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,798+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-gcztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,798+0000 INFO RequestHandler Handler(tag: 622, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,798+0000 DEBUG swift JOB_START jobid=runampl-mdztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0009.out, outdir/xhat_l20000_0001.0009.out, obj_outdir/obj_out_l0000_0001.0009.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0009.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/m/runampl-mdztedel host=midway
+2013-08-27 01:14:04,798+0000 INFO Cpu 0827-1301520-000001:11 jobTerminated
+2013-08-27 01:14:04,799+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-ndztedel thread=R-42-0-1x2-2-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,799+0000 INFO RequestHandler Handler(tag: 623, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,799+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=11
+2013-08-27 01:14:04,799+0000 INFO RequestHandler Handler(tag: 2766, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,799+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=11 Cpus sleeping: 10
+2013-08-27 01:14:04,799+0000 DEBUG Cpu 0827-1301520-000001:11 sleeping
+2013-08-27 01:14:04,799+0000 DEBUG swift JOB_START jobid=runampl-ndztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0002.out, outdir/xhat_l20000_0001.0002.out, obj_outdir/obj_out_l0000_0001.0002.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0002.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/n/runampl-ndztedel host=midway
+2013-08-27 01:14:04,800+0000 INFO LateBindingScheduler jobs queued: 0
+2013-08-27 01:14:04,800+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-odztedel thread=R-42-0-1x2-11-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,800+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,800+0000 INFO Cpu 0827-1301520-000001:13 jobTerminated
+2013-08-27 01:14:04,800+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=13
+2013-08-27 01:14:04,800+0000 INFO RequestHandler Handler(tag: 2767, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,800+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-lcztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,800+0000 INFO LateBindingScheduler jobs queued: 2
+2013-08-27 01:14:04,800+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=13 Cpus sleeping: 11
+2013-08-27 01:14:04,801+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-rcztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,801+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-pdztedel thread=R-42-0-1-0x3 host=midway replicationGroup=null
+2013-08-27 01:14:04,801+0000 DEBUG Cpu 0827-1301520-000001:13 sleeping
+2013-08-27 01:14:04,800+0000 DEBUG swift JOB_START jobid=runampl-odztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0011.out, outdir/xhat_l20000_0001.0011.out, obj_outdir/obj_out_l0000_0001.0011.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0011.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/o/runampl-odztedel host=midway
+2013-08-27 01:14:04,801+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,801+0000 INFO Cpu 0827-1301520-000001:7 jobTerminated
+2013-08-27 01:14:04,801+0000 DEBUG swift JOB_START jobid=runampl-pdztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0000.out, outdir/xhat_l20000_0000.0000.out, obj_outdir/obj_out_l0000_0000.0000.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0000.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/p/runampl-pdztedel host=midway
+2013-08-27 01:14:04,801+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=7
+2013-08-27 01:14:04,801+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=7 Cpus sleeping: 12
+2013-08-27 01:14:04,801+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-7cztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,801+0000 DEBUG Cpu 0827-1301520-000001:7 sleeping
+2013-08-27 01:14:04,801+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:04,801+0000 INFO RequestHandler Handler(tag: 2768, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,801+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:04,801+0000 INFO RequestHandler Handler(tag: 624, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,802+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:04,802+0000 INFO Cpu 0827-1301520-000001:14 jobTerminated
+2013-08-27 01:14:04,802+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=14
+2013-08-27 01:14:04,803+0000 INFO RequestHandler Handler(tag: 2769, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,802+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-dcztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,803+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-qdztedel thread=R-42-0x2 host=midway replicationGroup=null
+2013-08-27 01:14:04,803+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-ncztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,803+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=14 Cpus sleeping: 13
+2013-08-27 01:14:04,803+0000 DEBUG Cpu 0827-1301520-000001:14 sleeping
+2013-08-27 01:14:04,803+0000 INFO RequestHandler Handler(tag: 625, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,803+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-rdztedel thread=R-42-0-1x2-16-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,803+0000 DEBUG swift JOB_START jobid=runampl-qdztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat10000.out, outdir/xhat20000.out, obj_outdir/obj_ampl0000.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res0000.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/q/runampl-qdztedel host=midway
+2013-08-27 01:14:04,803+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-sdztedel thread=R-42-0-1-0-8-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,804+0000 INFO LateBindingScheduler jobs queued: 0
+2013-08-27 01:14:04,804+0000 DEBUG swift JOB_START jobid=runampl-sdztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0008.out, outdir/xhat_l20000_0000.0008.out, obj_outdir/obj_out_l0000_0000.0008.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0008.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/s/runampl-sdztedel host=midway
+2013-08-27 01:14:04,804+0000 INFO RequestHandler Handler(tag: 626, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,804+0000 DEBUG swift JOB_START jobid=runampl-rdztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0016.out, outdir/xhat_l20000_0001.0016.out, obj_outdir/obj_out_l0000_0001.0016.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0016.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/r/runampl-rdztedel host=midway
+2013-08-27 01:14:04,804+0000 INFO LateBindingScheduler jobs queued: 4
+2013-08-27 01:14:04,804+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-qcztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,805+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-udztedel thread=R-42-0-1x2-0x2 host=midway replicationGroup=null
+2013-08-27 01:14:04,805+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-vdztedel thread=R-42-0-1-0-4-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,805+0000 DEBUG swift JOB_START jobid=runampl-udztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0000.out, outdir/xhat_l20000_0001.0000.out, obj_outdir/obj_out_l0000_0001.0000.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0000.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/u/runampl-udztedel host=midway
+2013-08-27 01:14:04,805+0000 DEBUG swift JOB_START jobid=runampl-vdztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0004.out, outdir/xhat_l20000_0000.0004.out, obj_outdir/obj_out_l0000_0000.0004.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0004.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/v/runampl-vdztedel host=midway
+2013-08-27 01:14:04,807+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-9cztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,807+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-tdztedel thread=R-42-0-1-0-10-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,807+0000 DEBUG swift JOB_START jobid=runampl-tdztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0010.out, outdir/xhat_l20000_0000.0010.out, obj_outdir/obj_out_l0000_0000.0010.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0010.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/t/runampl-tdztedel host=midway
+2013-08-27 01:14:04,807+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:04,809+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-xdztedel thread=R-42-0-1-0-1-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,809+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-ecztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:04,809+0000 DEBUG swift JOB_START jobid=runampl-xdztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0000.0001.out, outdir/xhat_l20000_0000.0001.out, obj_outdir/obj_out_l0000_0000.0001.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0000.0001.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/x/runampl-xdztedel host=midway
+2013-08-27 01:14:04,809+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-ydztedel thread=R-42-0-1x2-7-0 host=midway replicationGroup=null
+2013-08-27 01:14:04,810+0000 DEBUG swift JOB_START jobid=runampl-ydztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0007.out, outdir/xhat_l20000_0001.0007.out, obj_outdir/obj_out_l0000_0001.0007.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0007.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/y/runampl-ydztedel host=midway
+2013-08-27 01:14:04,811+0000 INFO GetFileHandler Handler(tag: 2752, GET) sending length: 148937, 1043552805
+2013-08-27 01:14:04,811+0000 INFO GetFileHandler Handler(tag: 2752, GET) unregistering (last)
+2013-08-27 01:14:04,812+0000 INFO GetFileHandler Handler(tag: 2755, GET) sending length: 1925, 29141635
+2013-08-27 01:14:04,813+0000 INFO GetFileHandler Handler(tag: 2755, GET) unregistering (last)
+2013-08-27 01:14:04,814+0000 INFO GetFileHandler Handler(tag: 2770, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:04,814+0000 INFO GetFileHandler Handler(tag: 2770, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:04,814+0000 INFO GetFileHandler Handler(tag: 2770, GET) -> 627
+2013-08-27 01:14:04,814+0000 INFO GetFileHandler Handler(tag: 627, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:04,814+0000 INFO GetFileHandler Handler(tag: 627, GET) reader: LR-Handler(tag: 627, GET)
+2013-08-27 01:14:04,814+0000 INFO GetFileHandler Handler(tag: 627, GET) sending length: 543, 1583157172
+2013-08-27 01:14:04,814+0000 INFO ReadBuffer RB-LR-Handler(tag: 627, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:04,814+0000 INFO ReadBuffer RB-LR-Handler(tag: 627, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,814+0000 INFO LocalIOProvider LR-Handler(tag: 627, GET) rbuf: RB-LR-Handler(tag: 627, GET)
+2013-08-27 01:14:04,814+0000 INFO GetFileHandler Handler(tag: 2771, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,814+0000 INFO GetFileHandler Handler(tag: 627, GET) unregistering (last)
+2013-08-27 01:14:04,814+0000 INFO ReadBuffer RB-LR-Handler(tag: 627, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,814+0000 INFO GetFileHandler Handler(tag: 2771, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,814+0000 INFO GetFileHandler Handler(tag: 2771, GET) -> 628
+2013-08-27 01:14:04,814+0000 INFO GetFileHandler Handler(tag: 628, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,814+0000 INFO GetFileHandler Handler(tag: 628, GET) reader: LR-Handler(tag: 628, GET)
+2013-08-27 01:14:04,814+0000 INFO GetFileHandler Handler(tag: 628, GET) sending length: 14799449, 1477190004
+2013-08-27 01:14:04,814+0000 INFO ReadBuffer RB-LR-Handler(tag: 628, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,814+0000 INFO ReadBuffer RB-LR-Handler(tag: 628, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,814+0000 INFO LocalIOProvider LR-Handler(tag: 628, GET) rbuf: RB-LR-Handler(tag: 628, GET)
+2013-08-27 01:14:04,815+0000 INFO GetFileHandler Handler(tag: 2757, GET) sending length: 1925, 1703716661
+2013-08-27 01:14:04,816+0000 INFO GetFileHandler Handler(tag: 2757, GET) unregistering (last)
+2013-08-27 01:14:04,816+0000 INFO GetFileHandler Handler(tag: 2772, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,816+0000 INFO GetFileHandler Handler(tag: 2772, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,816+0000 INFO GetFileHandler Handler(tag: 2772, GET) -> 629
+2013-08-27 01:14:04,816+0000 INFO GetFileHandler Handler(tag: 629, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,816+0000 INFO GetFileHandler Handler(tag: 629, GET) reader: LR-Handler(tag: 629, GET)
+2013-08-27 01:14:04,816+0000 INFO GetFileHandler Handler(tag: 629, GET) sending length: 14799449, 1211075981
+2013-08-27 01:14:04,816+0000 INFO ReadBuffer RB-LR-Handler(tag: 629, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,816+0000 INFO ReadBuffer RB-LR-Handler(tag: 629, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,816+0000 INFO LocalIOProvider LR-Handler(tag: 629, GET) rbuf: RB-LR-Handler(tag: 629, GET)
+2013-08-27 01:14:04,820+0000 INFO RequestHandler Handler(tag: 53, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,826+0000 INFO RequestHandler Handler(tag: 55, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,826+0000 INFO RequestHandler Handler(tag: 56, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,827+0000 INFO RequestHandler Handler(tag: 57, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,827+0000 INFO RequestHandler Handler(tag: 54, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,827+0000 INFO ProxyIOProvider Command(tag: 591, GET) suspending
+2013-08-27 01:14:04,827+0000 INFO GetFileHandler Handler(tag: 591, GET) suspending
+2013-08-27 01:14:04,828+0000 INFO RequestHandler Handler(tag: 58, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,830+0000 INFO RequestHandler Handler(tag: 59, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,830+0000 INFO RequestHandler Handler(tag: 60, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,831+0000 INFO RequestHandler Handler(tag: 61, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,831+0000 INFO RequestHandler Handler(tag: 62, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,832+0000 INFO RequestHandler Handler(tag: 63, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,832+0000 INFO RequestHandler Handler(tag: 64, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,833+0000 INFO RequestHandler Handler(tag: 65, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:04,834+0000 INFO GetFileHandler Handler(tag: 2770, GET) sending length: 543, 805363256
+2013-08-27 01:14:04,834+0000 INFO GetFileHandler Handler(tag: 2770, GET) unregistering (last)
+2013-08-27 01:14:04,835+0000 INFO GetFileHandler Handler(tag: 2771, GET) sending length: 14799449, 1146586674
+2013-08-27 01:14:04,835+0000 INFO GetFileHandler Handler(tag: 2773, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:04,835+0000 INFO GetFileHandler Handler(tag: 2773, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:04,835+0000 INFO GetFileHandler Handler(tag: 2773, GET) -> 630
+2013-08-27 01:14:04,835+0000 INFO GetFileHandler Handler(tag: 630, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run
+2013-08-27 01:14:04,835+0000 INFO GetFileHandler Handler(tag: 630, GET) reader: LR-Handler(tag: 630, GET)
+2013-08-27 01:14:04,835+0000 INFO GetFileHandler Handler(tag: 630, GET) sending length: 2093, 498863731
+2013-08-27 01:14:04,835+0000 INFO ReadBuffer RB-LR-Handler(tag: 630, GET) will ask for 1 buffers for a size of 2093
+2013-08-27 01:14:04,835+0000 INFO ReadBuffer RB-LR-Handler(tag: 630, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,835+0000 INFO LocalIOProvider LR-Handler(tag: 630, GET) rbuf: RB-LR-Handler(tag: 630, GET)
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+2013-08-27 01:14:04,853+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=8 Cpus sleeping: 1
+2013-08-27 01:14:04,853+0000 INFO Cpu 0827-1301520-000001:8 (quality: 0.5) submitting urn:1377566032233-1377566032285-1377566032286: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0013.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0013.out|outdir/xhat_l10000_000
1.0013.out|outdir/xhat_l20000_0001.0013.out|Results/ampl_res_l0000_0001.0013.out|outdir/out_l0000_0001.0013.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0013.out outdir/xhat_l20000_0001.0013.out obj_outdir/obj_out_l0000_0001.0013.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0013.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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+2013-08-27 01:14:04,853+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=13 Cpus sleeping: 1
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01.0011.out|outdir/xhat_l20000_0001.0011.out|Results/ampl_res_l0000_0001.0011.out|outdir/out_l0000_0001.0011.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0011.out outdir/xhat_l20000_0001.0011.out obj_outdir/obj_out_l0000_0001.0011.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0011.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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+2013-08-27 01:14:04,854+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=2 Cpus sleeping: 1
+2013-08-27 01:14:04,854+0000 INFO Cpu 0827-1301520-000001:2 (quality: 0.5) submitting urn:1377566032259-1377566032291-1377566032292: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0002.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0002.out|outdir/xhat_l10000_000
1.0002.out|outdir/xhat_l20000_0001.0002.out|Results/ampl_res_l0000_0001.0002.out|outdir/out_l0000_0001.0002.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0002.out outdir/xhat_l20000_0001.0002.out obj_outdir/obj_out_l0000_0001.0002.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0002.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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+2013-08-27 01:14:04,854+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=3 Cpus sleeping: 1
+2013-08-27 01:14:04,854+0000 INFO Cpu 0827-1301520-000001:3 (quality: 0.5) submitting urn:1377566032262-1377566032294-1377566032295: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0000.0000.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0000.0000.out|outdir/xhat_l10000_000
0.0000.out|outdir/xhat_l20000_0000.0000.out|Results/ampl_res_l0000_0000.0000.out|outdir/out_l0000_0000.0000.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0000.out outdir/xhat_l20000_0000.0000.out obj_outdir/obj_out_l0000_0000.0000.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0000.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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+2013-08-27 01:14:04,854+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=6 Cpus sleeping: 1
+2013-08-27 01:14:04,854+0000 INFO Cpu 0827-1301520-000001:6 (quality: 0.5) submitting urn:1377566032251-1377566032297-1377566032298: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0009.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0009.out|outdir/xhat_l10000_000
1.0009.out|outdir/xhat_l20000_0001.0009.out|Results/ampl_res_l0000_0001.0009.out|outdir/out_l0000_0001.0009.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0009.out outdir/xhat_l20000_0001.0009.out obj_outdir/obj_out_l0000_0001.0009.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0009.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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+2013-08-27 01:14:04,855+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=11 Cpus sleeping: 1
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esults/ampl_res0000.out|outdir/ampl0000.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat10000.out outdir/xhat20000.out obj_outdir/obj_ampl0000.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res0000.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,855+0000 INFO RequestHandler Handler(tag: 636, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,855+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=10 Cpus sleeping: 1
+2013-08-27 01:14:04,855+0000 INFO Cpu 0827-1301520-000001:10 (quality: 0.5) submitting urn:1377566032267-1377566032303-1377566032304: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0000.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0000.out|outdir/xhat_l10000_00
01.0000.out|outdir/xhat_l20000_0001.0000.out|Results/ampl_res_l0000_0001.0000.out|outdir/out_l0000_0001.0000.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0000.out outdir/xhat_l20000_0001.0000.out obj_outdir/obj_out_l0000_0001.0000.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0000.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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+2013-08-27 01:14:04,855+0000 INFO RequestHandler Handler(tag: 638, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,855+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,855+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=7 Cpus sleeping: 1
+2013-08-27 01:14:04,855+0000 INFO RequestHandler Handler(tag: 2774, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,855+0000 INFO RequestHandler Handler(tag: 639, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,855+0000 INFO Cpu 0827-1301520-000001:7 (quality: 0.5) submitting urn:1377566032268-1377566032306-1377566032307: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0000.0004.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0000.0004.out|outdir/xhat_l10000_000
0.0004.out|outdir/xhat_l20000_0000.0004.out|Results/ampl_res_l0000_0000.0004.out|outdir/out_l0000_0000.0004.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0004.out outdir/xhat_l20000_0000.0004.out obj_outdir/obj_out_l0000_0000.0004.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0004.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
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+2013-08-27 01:14:04,855+0000 INFO RequestHandler Handler(tag: 640, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,855+0000 INFO GetFileHandler Handler(tag: 2775, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,855+0000 INFO GetFileHandler Handler(tag: 2775, GET) -> 641
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+2013-08-27 01:14:04,855+0000 INFO GetFileHandler Handler(tag: 641, GET) sending length: 1925, 652953127
+2013-08-27 01:14:04,855+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=9 Cpus sleeping: 1
+2013-08-27 01:14:04,855+0000 INFO ReadBuffer RB-LR-Handler(tag: 641, GET) will ask for 1 buffers for a size of 1925
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+2013-08-27 01:14:04,855+0000 INFO LocalIOProvider LR-Handler(tag: 641, GET) rbuf: RB-LR-Handler(tag: 641, GET)
+2013-08-27 01:14:04,855+0000 INFO GetFileHandler Handler(tag: 641, GET) unregistering (last)
+2013-08-27 01:14:04,855+0000 INFO Cpu 0827-1301520-000001:9 (quality: 0.5) submitting urn:1377566032275-1377566032309-1377566032310: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0016.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0016.out|outdir/xhat_l10000_000
1.0016.out|outdir/xhat_l20000_0001.0016.out|Results/ampl_res_l0000_0001.0016.out|outdir/out_l0000_0001.0016.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0016.out outdir/xhat_l20000_0001.0016.out obj_outdir/obj_out_l0000_0001.0016.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0016.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,855+0000 INFO ReadBuffer RB-LR-Handler(tag: 641, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,856+0000 INFO RequestHandler Handler(tag: 642, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,856+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=14 Cpus sleeping: 1
+2013-08-27 01:14:04,856+0000 INFO Cpu 0827-1301520-000001:14 (quality: 0.5) submitting urn:1377566032276-1377566032312-1377566032313: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0000.0008.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0000.0008.out|outdir/xhat_l10000_00
00.0008.out|outdir/xhat_l20000_0000.0008.out|Results/ampl_res_l0000_0000.0008.out|outdir/out_l0000_0000.0008.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0008.out outdir/xhat_l20000_0000.0008.out obj_outdir/obj_out_l0000_0000.0008.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0008.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,856+0000 INFO RequestHandler Handler(tag: 643, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,856+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=12 Cpus sleeping: 1
+2013-08-27 01:14:04,856+0000 INFO Cpu 0827-1301520-000001:12 (quality: 0.5) submitting urn:1377566032279-1377566032315-1377566032316: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0000.0010.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0000.0010.out|outdir/xhat_l10000_00
00.0010.out|outdir/xhat_l20000_0000.0010.out|Results/ampl_res_l0000_0000.0010.out|outdir/out_l0000_0000.0010.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0010.out outdir/xhat_l20000_0000.0010.out obj_outdir/obj_out_l0000_0000.0010.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0010.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,856+0000 INFO RequestHandler Handler(tag: 644, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,856+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=4 Cpus sleeping: 1
+2013-08-27 01:14:04,856+0000 INFO Cpu 0827-1301520-000001:4 (quality: 0.5) submitting urn:1377566032281-1377566032318-1377566032319: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0000.0001.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0000.0001.out|outdir/xhat_l10000_000
0.0001.out|outdir/xhat_l20000_0000.0001.out|Results/ampl_res_l0000_0000.0001.out|outdir/out_l0000_0000.0001.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0000.0001.out outdir/xhat_l20000_0000.0001.out obj_outdir/obj_out_l0000_0000.0001.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0000.0001.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,856+0000 INFO RequestHandler Handler(tag: 645, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,856+0000 INFO RequestHandler Handler(tag: 646, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,856+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=15 Cpus sleeping: 1
+2013-08-27 01:14:04,857+0000 INFO Cpu 0827-1301520-000001:15 (quality: 0.5) submitting urn:1377566032283-1377566032321-1377566032322: /bin/bash _swiftwrap.staging -e /home/maheshwari/powergridapps/bin/run_ampl.py -out outdir/out_l0000_0001.0007.out -err stderr.txt -i -d obj_outdir|outdir|Results -if __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc|__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat -of obj_outdir/obj_out_l0000_0001.0007.out|outdir/xhat_l10000_00
01.0007.out|outdir/xhat_l20000_0001.0007.out|Results/ampl_res_l0000_0001.0007.out|outdir/out_l0000_0001.0007.out -k -cdmfile -status provider -a 10 0 __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run outdir/xhat_l10000_0001.0007.out outdir/xhat_l20000_0001.0007.out obj_outdir/obj_out_l0000_0001.0007.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc Results/ampl_res_l0000_0001.0007.out __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat
+2013-08-27 01:14:04,857+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,857+0000 INFO RequestHandler Handler(tag: 2776, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,857+0000 INFO RequestHandler Handler(tag: 647, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,857+0000 INFO RequestHandler Handler(tag: 648, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,857+0000 INFO GetFileHandler Handler(tag: 2777, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,857+0000 INFO GetFileHandler Handler(tag: 2777, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,857+0000 INFO GetFileHandler Handler(tag: 2777, GET) -> 649
+2013-08-27 01:14:04,857+0000 INFO GetFileHandler Handler(tag: 649, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,857+0000 INFO GetFileHandler Handler(tag: 649, GET) reader: LR-Handler(tag: 649, GET)
+2013-08-27 01:14:04,857+0000 INFO GetFileHandler Handler(tag: 649, GET) sending length: 1925, 1451474685
+2013-08-27 01:14:04,857+0000 INFO ReadBuffer RB-LR-Handler(tag: 649, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,857+0000 INFO ReadBuffer RB-LR-Handler(tag: 649, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,857+0000 INFO LocalIOProvider LR-Handler(tag: 649, GET) rbuf: RB-LR-Handler(tag: 649, GET)
+2013-08-27 01:14:04,857+0000 INFO GetFileHandler Handler(tag: 649, GET) unregistering (last)
+2013-08-27 01:14:04,857+0000 INFO ReadBuffer RB-LR-Handler(tag: 649, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,858+0000 INFO RequestHandler Handler(tag: 650, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,858+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,858+0000 INFO RequestHandler Handler(tag: 2778, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,858+0000 INFO RequestHandler Handler(tag: 651, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,858+0000 INFO GetFileHandler Handler(tag: 2779, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,858+0000 INFO GetFileHandler Handler(tag: 2779, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,858+0000 INFO GetFileHandler Handler(tag: 2779, GET) -> 652
+2013-08-27 01:14:04,858+0000 INFO GetFileHandler Handler(tag: 652, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,858+0000 INFO GetFileHandler Handler(tag: 652, GET) reader: LR-Handler(tag: 652, GET)
+2013-08-27 01:14:04,858+0000 INFO GetFileHandler Handler(tag: 652, GET) sending length: 1925, 37278946
+2013-08-27 01:14:04,858+0000 INFO ReadBuffer RB-LR-Handler(tag: 652, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,858+0000 INFO ReadBuffer RB-LR-Handler(tag: 652, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,858+0000 INFO LocalIOProvider LR-Handler(tag: 652, GET) rbuf: RB-LR-Handler(tag: 652, GET)
+2013-08-27 01:14:04,858+0000 INFO GetFileHandler Handler(tag: 652, GET) unregistering (last)
+2013-08-27 01:14:04,858+0000 INFO ReadBuffer RB-LR-Handler(tag: 652, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,858+0000 INFO GetFileHandler Handler(tag: 2773, GET) sending length: 2093, 217214824
+2013-08-27 01:14:04,858+0000 INFO GetFileHandler Handler(tag: 2773, GET) unregistering (last)
+2013-08-27 01:14:04,859+0000 INFO RequestHandler Handler(tag: 653, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,859+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,859+0000 INFO RequestHandler Handler(tag: 2780, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,859+0000 INFO RequestHandler Handler(tag: 654, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,859+0000 INFO GetFileHandler Handler(tag: 2781, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,859+0000 INFO GetFileHandler Handler(tag: 2781, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,860+0000 INFO GetFileHandler Handler(tag: 2781, GET) -> 655
+2013-08-27 01:14:04,860+0000 INFO GetFileHandler Handler(tag: 655, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,860+0000 INFO GetFileHandler Handler(tag: 655, GET) reader: LR-Handler(tag: 655, GET)
+2013-08-27 01:14:04,860+0000 INFO GetFileHandler Handler(tag: 655, GET) sending length: 1925, 1519238493
+2013-08-27 01:14:04,860+0000 INFO ReadBuffer RB-LR-Handler(tag: 655, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,860+0000 INFO ReadBuffer RB-LR-Handler(tag: 655, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,860+0000 INFO LocalIOProvider LR-Handler(tag: 655, GET) rbuf: RB-LR-Handler(tag: 655, GET)
+2013-08-27 01:14:04,860+0000 INFO GetFileHandler Handler(tag: 655, GET) unregistering (last)
+2013-08-27 01:14:04,860+0000 INFO ReadBuffer RB-LR-Handler(tag: 655, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,861+0000 INFO RequestHandler Handler(tag: 656, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,861+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,861+0000 INFO RequestHandler Handler(tag: 657, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,861+0000 INFO RequestHandler Handler(tag: 2782, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,861+0000 INFO GetFileHandler Handler(tag: 2783, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,861+0000 INFO GetFileHandler Handler(tag: 2783, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,861+0000 INFO GetFileHandler Handler(tag: 2783, GET) -> 658
+2013-08-27 01:14:04,861+0000 INFO GetFileHandler Handler(tag: 658, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,861+0000 INFO GetFileHandler Handler(tag: 658, GET) reader: LR-Handler(tag: 658, GET)
+2013-08-27 01:14:04,861+0000 INFO GetFileHandler Handler(tag: 658, GET) sending length: 1925, 1807020015
+2013-08-27 01:14:04,861+0000 INFO ReadBuffer RB-LR-Handler(tag: 658, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,861+0000 INFO ReadBuffer RB-LR-Handler(tag: 658, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,861+0000 INFO LocalIOProvider LR-Handler(tag: 658, GET) rbuf: RB-LR-Handler(tag: 658, GET)
+2013-08-27 01:14:04,861+0000 INFO GetFileHandler Handler(tag: 658, GET) unregistering (last)
+2013-08-27 01:14:04,861+0000 INFO ReadBuffer RB-LR-Handler(tag: 658, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,862+0000 INFO RequestHandler Handler(tag: 659, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,862+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,862+0000 INFO RequestHandler Handler(tag: 2784, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,862+0000 INFO RequestHandler Handler(tag: 660, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,862+0000 INFO GetFileHandler Handler(tag: 2785, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,862+0000 INFO GetFileHandler Handler(tag: 2785, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,862+0000 INFO GetFileHandler Handler(tag: 2785, GET) -> 661
+2013-08-27 01:14:04,862+0000 INFO GetFileHandler Handler(tag: 661, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,862+0000 INFO GetFileHandler Handler(tag: 661, GET) reader: LR-Handler(tag: 661, GET)
+2013-08-27 01:14:04,862+0000 INFO GetFileHandler Handler(tag: 661, GET) sending length: 1925, 1389311915
+2013-08-27 01:14:04,862+0000 INFO ReadBuffer RB-LR-Handler(tag: 661, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,862+0000 INFO ReadBuffer RB-LR-Handler(tag: 661, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,862+0000 INFO LocalIOProvider LR-Handler(tag: 661, GET) rbuf: RB-LR-Handler(tag: 661, GET)
+2013-08-27 01:14:04,862+0000 INFO GetFileHandler Handler(tag: 661, GET) unregistering (last)
+2013-08-27 01:14:04,862+0000 INFO ReadBuffer RB-LR-Handler(tag: 661, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,863+0000 INFO RequestHandler Handler(tag: 662, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,864+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,864+0000 INFO RequestHandler Handler(tag: 2786, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,864+0000 INFO RequestHandler Handler(tag: 663, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,864+0000 INFO GetFileHandler Handler(tag: 2787, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,864+0000 INFO GetFileHandler Handler(tag: 2787, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,864+0000 INFO GetFileHandler Handler(tag: 2787, GET) -> 664
+2013-08-27 01:14:04,864+0000 INFO GetFileHandler Handler(tag: 664, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,864+0000 INFO GetFileHandler Handler(tag: 664, GET) reader: LR-Handler(tag: 664, GET)
+2013-08-27 01:14:04,864+0000 INFO GetFileHandler Handler(tag: 664, GET) sending length: 1925, 349983176
+2013-08-27 01:14:04,864+0000 INFO ReadBuffer RB-LR-Handler(tag: 664, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,864+0000 INFO ReadBuffer RB-LR-Handler(tag: 664, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,864+0000 INFO LocalIOProvider LR-Handler(tag: 664, GET) rbuf: RB-LR-Handler(tag: 664, GET)
+2013-08-27 01:14:04,864+0000 INFO GetFileHandler Handler(tag: 664, GET) unregistering (last)
+2013-08-27 01:14:04,864+0000 INFO ReadBuffer RB-LR-Handler(tag: 664, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,865+0000 INFO RequestHandler Handler(tag: 665, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,865+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,865+0000 INFO RequestHandler Handler(tag: 2788, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,865+0000 INFO RequestHandler Handler(tag: 666, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,865+0000 INFO GetFileHandler Handler(tag: 2789, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,865+0000 INFO GetFileHandler Handler(tag: 2789, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,865+0000 INFO GetFileHandler Handler(tag: 2789, GET) -> 667
+2013-08-27 01:14:04,865+0000 INFO GetFileHandler Handler(tag: 667, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,865+0000 INFO GetFileHandler Handler(tag: 667, GET) reader: LR-Handler(tag: 667, GET)
+2013-08-27 01:14:04,865+0000 INFO GetFileHandler Handler(tag: 667, GET) sending length: 1925, 997121798
+2013-08-27 01:14:04,865+0000 INFO ReadBuffer RB-LR-Handler(tag: 667, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,865+0000 INFO ReadBuffer RB-LR-Handler(tag: 667, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,865+0000 INFO LocalIOProvider LR-Handler(tag: 667, GET) rbuf: RB-LR-Handler(tag: 667, GET)
+2013-08-27 01:14:04,865+0000 INFO GetFileHandler Handler(tag: 667, GET) unregistering (last)
+2013-08-27 01:14:04,865+0000 INFO ReadBuffer RB-LR-Handler(tag: 667, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,866+0000 INFO RequestHandler Handler(tag: 668, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,866+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,866+0000 INFO RequestHandler Handler(tag: 2790, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,866+0000 INFO RequestHandler Handler(tag: 669, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,866+0000 INFO GetFileHandler Handler(tag: 2791, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,866+0000 INFO GetFileHandler Handler(tag: 2791, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,866+0000 INFO GetFileHandler Handler(tag: 2791, GET) -> 670
+2013-08-27 01:14:04,866+0000 INFO GetFileHandler Handler(tag: 670, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,866+0000 INFO GetFileHandler Handler(tag: 670, GET) reader: LR-Handler(tag: 670, GET)
+2013-08-27 01:14:04,866+0000 INFO GetFileHandler Handler(tag: 670, GET) sending length: 1925, 956662815
+2013-08-27 01:14:04,866+0000 INFO ReadBuffer RB-LR-Handler(tag: 670, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,866+0000 INFO ReadBuffer RB-LR-Handler(tag: 670, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,866+0000 INFO LocalIOProvider LR-Handler(tag: 670, GET) rbuf: RB-LR-Handler(tag: 670, GET)
+2013-08-27 01:14:04,866+0000 INFO GetFileHandler Handler(tag: 670, GET) unregistering (last)
+2013-08-27 01:14:04,866+0000 INFO ReadBuffer RB-LR-Handler(tag: 670, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,867+0000 INFO RequestHandler Handler(tag: 671, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,867+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,867+0000 INFO RequestHandler Handler(tag: 672, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,867+0000 INFO RequestHandler Handler(tag: 2792, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,867+0000 INFO GetFileHandler Handler(tag: 2793, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,867+0000 INFO GetFileHandler Handler(tag: 2793, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,867+0000 INFO GetFileHandler Handler(tag: 2793, GET) -> 673
+2013-08-27 01:14:04,867+0000 INFO GetFileHandler Handler(tag: 673, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,867+0000 INFO GetFileHandler Handler(tag: 673, GET) reader: LR-Handler(tag: 673, GET)
+2013-08-27 01:14:04,867+0000 INFO GetFileHandler Handler(tag: 673, GET) sending length: 1925, 1202767937
+2013-08-27 01:14:04,867+0000 INFO ReadBuffer RB-LR-Handler(tag: 673, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,867+0000 INFO ReadBuffer RB-LR-Handler(tag: 673, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,867+0000 INFO LocalIOProvider LR-Handler(tag: 673, GET) rbuf: RB-LR-Handler(tag: 673, GET)
+2013-08-27 01:14:04,867+0000 INFO GetFileHandler Handler(tag: 673, GET) unregistering (last)
+2013-08-27 01:14:04,867+0000 INFO ReadBuffer RB-LR-Handler(tag: 673, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,868+0000 INFO RequestHandler Handler(tag: 674, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,868+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,868+0000 INFO RequestHandler Handler(tag: 2794, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,868+0000 INFO RequestHandler Handler(tag: 675, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,868+0000 INFO GetFileHandler Handler(tag: 2795, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,868+0000 INFO GetFileHandler Handler(tag: 2795, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,868+0000 INFO GetFileHandler Handler(tag: 2795, GET) -> 676
+2013-08-27 01:14:04,868+0000 INFO GetFileHandler Handler(tag: 676, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,868+0000 INFO GetFileHandler Handler(tag: 676, GET) reader: LR-Handler(tag: 676, GET)
+2013-08-27 01:14:04,868+0000 INFO GetFileHandler Handler(tag: 676, GET) sending length: 1925, 1208475863
+2013-08-27 01:14:04,868+0000 INFO ReadBuffer RB-LR-Handler(tag: 676, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,868+0000 INFO ReadBuffer RB-LR-Handler(tag: 676, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,868+0000 INFO LocalIOProvider LR-Handler(tag: 676, GET) rbuf: RB-LR-Handler(tag: 676, GET)
+2013-08-27 01:14:04,868+0000 INFO GetFileHandler Handler(tag: 676, GET) unregistering (last)
+2013-08-27 01:14:04,868+0000 INFO ReadBuffer RB-LR-Handler(tag: 676, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,869+0000 INFO RequestHandler Handler(tag: 677, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,869+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,869+0000 INFO RequestHandler Handler(tag: 2796, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,869+0000 INFO RequestHandler Handler(tag: 678, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,869+0000 INFO GetFileHandler Handler(tag: 2797, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,869+0000 INFO GetFileHandler Handler(tag: 2797, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,869+0000 INFO GetFileHandler Handler(tag: 2797, GET) -> 679
+2013-08-27 01:14:04,869+0000 INFO GetFileHandler Handler(tag: 679, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,869+0000 INFO GetFileHandler Handler(tag: 679, GET) reader: LR-Handler(tag: 679, GET)
+2013-08-27 01:14:04,869+0000 INFO GetFileHandler Handler(tag: 679, GET) sending length: 1925, 1776045928
+2013-08-27 01:14:04,869+0000 INFO ReadBuffer RB-LR-Handler(tag: 679, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,869+0000 INFO ReadBuffer RB-LR-Handler(tag: 679, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,869+0000 INFO LocalIOProvider LR-Handler(tag: 679, GET) rbuf: RB-LR-Handler(tag: 679, GET)
+2013-08-27 01:14:04,869+0000 INFO GetFileHandler Handler(tag: 679, GET) unregistering (last)
+2013-08-27 01:14:04,869+0000 INFO ReadBuffer RB-LR-Handler(tag: 679, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,870+0000 INFO RequestHandler Handler(tag: 680, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,870+0000 DEBUG Cpu Stagein workerid=000000
+2013-08-27 01:14:04,870+0000 INFO RequestHandler Handler(tag: 2798, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,870+0000 INFO RequestHandler Handler(tag: 681, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,870+0000 INFO GetFileHandler Handler(tag: 2799, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,870+0000 INFO GetFileHandler Handler(tag: 2799, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,870+0000 INFO GetFileHandler Handler(tag: 2799, GET) -> 682
+2013-08-27 01:14:04,870+0000 INFO GetFileHandler Handler(tag: 682, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc
+2013-08-27 01:14:04,870+0000 INFO GetFileHandler Handler(tag: 682, GET) reader: LR-Handler(tag: 682, GET)
+2013-08-27 01:14:04,870+0000 INFO GetFileHandler Handler(tag: 682, GET) sending length: 1925, 1416516259
+2013-08-27 01:14:04,870+0000 INFO ReadBuffer RB-LR-Handler(tag: 682, GET) will ask for 1 buffers for a size of 1925
+2013-08-27 01:14:04,870+0000 INFO ReadBuffer RB-LR-Handler(tag: 682, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,870+0000 INFO LocalIOProvider LR-Handler(tag: 682, GET) rbuf: RB-LR-Handler(tag: 682, GET)
+2013-08-27 01:14:04,870+0000 INFO GetFileHandler Handler(tag: 682, GET) unregistering (last)
+2013-08-27 01:14:04,870+0000 INFO ReadBuffer RB-LR-Handler(tag: 682, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,872+0000 INFO GetFileHandler Handler(tag: 2800, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:04,872+0000 INFO GetFileHandler Handler(tag: 2800, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:04,872+0000 INFO GetFileHandler Handler(tag: 2800, GET) -> 683
+2013-08-27 01:14:04,872+0000 INFO GetFileHandler Handler(tag: 683, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:04,872+0000 INFO GetFileHandler Handler(tag: 683, GET) reader: LR-Handler(tag: 683, GET)
+2013-08-27 01:14:04,872+0000 INFO GetFileHandler Handler(tag: 683, GET) sending length: 5032, 1240584986
+2013-08-27 01:14:04,872+0000 INFO ReadBuffer RB-LR-Handler(tag: 683, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:04,872+0000 INFO ReadBuffer RB-LR-Handler(tag: 683, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,872+0000 INFO LocalIOProvider LR-Handler(tag: 683, GET) rbuf: RB-LR-Handler(tag: 683, GET)
+2013-08-27 01:14:04,872+0000 INFO GetFileHandler Handler(tag: 683, GET) unregistering (last)
+2013-08-27 01:14:04,872+0000 INFO ReadBuffer RB-LR-Handler(tag: 683, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,880+0000 INFO GetFileHandler Handler(tag: 2775, GET) sending length: 1925, 133274679
+2013-08-27 01:14:04,881+0000 INFO GetFileHandler Handler(tag: 2775, GET) unregistering (last)
+2013-08-27 01:14:04,881+0000 INFO GetFileHandler Handler(tag: 2801, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,881+0000 INFO GetFileHandler Handler(tag: 2801, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,881+0000 INFO GetFileHandler Handler(tag: 2801, GET) -> 684
+2013-08-27 01:14:04,881+0000 INFO GetFileHandler Handler(tag: 684, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,881+0000 INFO GetFileHandler Handler(tag: 684, GET) reader: LR-Handler(tag: 684, GET)
+2013-08-27 01:14:04,881+0000 INFO GetFileHandler Handler(tag: 684, GET) sending length: 14799449, 226356279
+2013-08-27 01:14:04,881+0000 INFO ReadBuffer RB-LR-Handler(tag: 684, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,881+0000 INFO ReadBuffer RB-LR-Handler(tag: 684, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,881+0000 INFO LocalIOProvider LR-Handler(tag: 684, GET) rbuf: RB-LR-Handler(tag: 684, GET)
+2013-08-27 01:14:04,882+0000 INFO GetFileHandler Handler(tag: 2777, GET) sending length: 1925, 584067083
+2013-08-27 01:14:04,882+0000 INFO GetFileHandler Handler(tag: 2777, GET) unregistering (last)
+2013-08-27 01:14:04,882+0000 INFO GetFileHandler Handler(tag: 2802, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,882+0000 INFO GetFileHandler Handler(tag: 2802, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,882+0000 INFO GetFileHandler Handler(tag: 2802, GET) -> 685
+2013-08-27 01:14:04,882+0000 INFO GetFileHandler Handler(tag: 685, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,882+0000 INFO GetFileHandler Handler(tag: 2779, GET) sending length: 1925, 931424247
+2013-08-27 01:14:04,882+0000 INFO GetFileHandler Handler(tag: 685, GET) reader: LR-Handler(tag: 685, GET)
+2013-08-27 01:14:04,882+0000 INFO GetFileHandler Handler(tag: 685, GET) sending length: 14799449, 586894708
+2013-08-27 01:14:04,882+0000 INFO ReadBuffer RB-LR-Handler(tag: 685, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,883+0000 INFO ReadBuffer RB-LR-Handler(tag: 685, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,883+0000 INFO LocalIOProvider LR-Handler(tag: 685, GET) rbuf: RB-LR-Handler(tag: 685, GET)
+2013-08-27 01:14:04,883+0000 INFO GetFileHandler Handler(tag: 2779, GET) unregistering (last)
+2013-08-27 01:14:04,884+0000 INFO GetFileHandler Handler(tag: 2803, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,884+0000 INFO GetFileHandler Handler(tag: 2803, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,884+0000 INFO GetFileHandler Handler(tag: 2803, GET) -> 686
+2013-08-27 01:14:04,884+0000 INFO GetFileHandler Handler(tag: 686, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,884+0000 INFO GetFileHandler Handler(tag: 686, GET) reader: LR-Handler(tag: 686, GET)
+2013-08-27 01:14:04,884+0000 INFO GetFileHandler Handler(tag: 686, GET) sending length: 14799449, 1670602101
+2013-08-27 01:14:04,884+0000 INFO ReadBuffer RB-LR-Handler(tag: 686, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,884+0000 INFO ReadBuffer RB-LR-Handler(tag: 686, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,884+0000 INFO LocalIOProvider LR-Handler(tag: 686, GET) rbuf: RB-LR-Handler(tag: 686, GET)
+2013-08-27 01:14:04,885+0000 INFO GetFileHandler Handler(tag: 2781, GET) sending length: 1925, 500076814
+2013-08-27 01:14:04,886+0000 INFO GetFileHandler Handler(tag: 2781, GET) unregistering (last)
+2013-08-27 01:14:04,888+0000 INFO GetFileHandler Handler(tag: 2804, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,888+0000 INFO GetFileHandler Handler(tag: 2783, GET) sending length: 1925, 1607436604
+2013-08-27 01:14:04,888+0000 INFO GetFileHandler Handler(tag: 2783, GET) unregistering (last)
+2013-08-27 01:14:04,888+0000 INFO GetFileHandler Handler(tag: 2804, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,888+0000 INFO GetFileHandler Handler(tag: 2804, GET) -> 687
+2013-08-27 01:14:04,888+0000 INFO GetFileHandler Handler(tag: 687, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,889+0000 INFO GetFileHandler Handler(tag: 687, GET) reader: LR-Handler(tag: 687, GET)
+2013-08-27 01:14:04,889+0000 INFO GetFileHandler Handler(tag: 687, GET) sending length: 14799449, 157861601
+2013-08-27 01:14:04,889+0000 INFO ReadBuffer RB-LR-Handler(tag: 687, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,889+0000 INFO ReadBuffer RB-LR-Handler(tag: 687, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,889+0000 INFO LocalIOProvider LR-Handler(tag: 687, GET) rbuf: RB-LR-Handler(tag: 687, GET)
+2013-08-27 01:14:04,890+0000 INFO GetFileHandler Handler(tag: 2785, GET) sending length: 1925, 1778715694
+2013-08-27 01:14:04,891+0000 INFO ThrottleManager O maxBuffers=1024, crtBuffers=1023, allowedTransfers=0, active=0, suspended=0
+2013-08-27 01:14:04,891+0000 INFO ThrottleManager mem=180.27 MB, heap=371.44 MB, maxHeap=910.25 MB
+2013-08-27 01:14:04,891+0000 INFO GetFileHandler Handler(tag: 2785, GET) unregistering (last)
+2013-08-27 01:14:04,893+0000 INFO GetFileHandler Handler(tag: 2805, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,893+0000 INFO GetFileHandler Handler(tag: 2805, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,893+0000 INFO GetFileHandler Handler(tag: 2805, GET) -> 688
+2013-08-27 01:14:04,893+0000 INFO GetFileHandler Handler(tag: 688, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,893+0000 INFO GetFileHandler Handler(tag: 2787, GET) sending length: 1925, 1519150663
+2013-08-27 01:14:04,893+0000 INFO GetFileHandler Handler(tag: 688, GET) reader: LR-Handler(tag: 688, GET)
+2013-08-27 01:14:04,893+0000 INFO GetFileHandler Handler(tag: 688, GET) sending length: 14799449, 932113858
+2013-08-27 01:14:04,893+0000 INFO ReadBuffer RB-LR-Handler(tag: 688, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,893+0000 INFO ReadBuffer RB-LR-Handler(tag: 688, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,893+0000 INFO LocalIOProvider LR-Handler(tag: 688, GET) rbuf: RB-LR-Handler(tag: 688, GET)
+2013-08-27 01:14:04,893+0000 INFO GetFileHandler Handler(tag: 2806, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,893+0000 INFO GetFileHandler Handler(tag: 2806, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,893+0000 INFO GetFileHandler Handler(tag: 2806, GET) -> 689
+2013-08-27 01:14:04,893+0000 INFO GetFileHandler Handler(tag: 689, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,893+0000 INFO GetFileHandler Handler(tag: 689, GET) reader: LR-Handler(tag: 689, GET)
+2013-08-27 01:14:04,893+0000 INFO GetFileHandler Handler(tag: 689, GET) sending length: 14799449, 2140065057
+2013-08-27 01:14:04,893+0000 INFO ReadBuffer RB-LR-Handler(tag: 689, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,893+0000 INFO ReadBuffer RB-LR-Handler(tag: 689, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,893+0000 INFO LocalIOProvider LR-Handler(tag: 689, GET) rbuf: RB-LR-Handler(tag: 689, GET)
+2013-08-27 01:14:04,893+0000 INFO GetFileHandler Handler(tag: 2787, GET) unregistering (last)
+2013-08-27 01:14:04,894+0000 INFO GetFileHandler Handler(tag: 2789, GET) sending length: 1925, 1541493866
+2013-08-27 01:14:04,894+0000 INFO GetFileHandler Handler(tag: 2807, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,894+0000 INFO GetFileHandler Handler(tag: 2807, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,894+0000 INFO GetFileHandler Handler(tag: 2807, GET) -> 690
+2013-08-27 01:14:04,894+0000 INFO GetFileHandler Handler(tag: 690, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,894+0000 INFO GetFileHandler Handler(tag: 690, GET) reader: LR-Handler(tag: 690, GET)
+2013-08-27 01:14:04,894+0000 INFO GetFileHandler Handler(tag: 690, GET) sending length: 14799449, 1223847263
+2013-08-27 01:14:04,894+0000 INFO ReadBuffer RB-LR-Handler(tag: 690, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,894+0000 INFO ReadBuffer RB-LR-Handler(tag: 690, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,894+0000 INFO LocalIOProvider LR-Handler(tag: 690, GET) rbuf: RB-LR-Handler(tag: 690, GET)
+2013-08-27 01:14:04,894+0000 INFO GetFileHandler Handler(tag: 2789, GET) unregistering (last)
+2013-08-27 01:14:04,895+0000 INFO GetFileHandler Handler(tag: 2791, GET) sending length: 1925, 1350986978
+2013-08-27 01:14:04,895+0000 INFO GetFileHandler Handler(tag: 2808, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,895+0000 INFO GetFileHandler Handler(tag: 2808, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,895+0000 INFO GetFileHandler Handler(tag: 2808, GET) -> 691
+2013-08-27 01:14:04,895+0000 INFO GetFileHandler Handler(tag: 691, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,895+0000 INFO GetFileHandler Handler(tag: 691, GET) reader: LR-Handler(tag: 691, GET)
+2013-08-27 01:14:04,895+0000 INFO GetFileHandler Handler(tag: 691, GET) sending length: 14799449, 1924876336
+2013-08-27 01:14:04,895+0000 INFO ReadBuffer RB-LR-Handler(tag: 691, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,895+0000 INFO ReadBuffer RB-LR-Handler(tag: 691, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,895+0000 INFO LocalIOProvider LR-Handler(tag: 691, GET) rbuf: RB-LR-Handler(tag: 691, GET)
+2013-08-27 01:14:04,895+0000 INFO GetFileHandler Handler(tag: 2791, GET) unregistering (last)
+2013-08-27 01:14:04,896+0000 INFO GetFileHandler Handler(tag: 2809, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,896+0000 INFO GetFileHandler Handler(tag: 2809, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,896+0000 INFO GetFileHandler Handler(tag: 2809, GET) -> 692
+2013-08-27 01:14:04,896+0000 INFO GetFileHandler Handler(tag: 692, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,896+0000 INFO GetFileHandler Handler(tag: 692, GET) reader: LR-Handler(tag: 692, GET)
+2013-08-27 01:14:04,896+0000 INFO GetFileHandler Handler(tag: 692, GET) sending length: 14799449, 950746193
+2013-08-27 01:14:04,896+0000 INFO ReadBuffer RB-LR-Handler(tag: 692, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,896+0000 INFO ReadBuffer RB-LR-Handler(tag: 692, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,896+0000 INFO LocalIOProvider LR-Handler(tag: 692, GET) rbuf: RB-LR-Handler(tag: 692, GET)
+2013-08-27 01:14:04,896+0000 INFO GetFileHandler Handler(tag: 2793, GET) sending length: 1925, 671638060
+2013-08-27 01:14:04,897+0000 INFO GetFileHandler Handler(tag: 2793, GET) unregistering (last)
+2013-08-27 01:14:04,897+0000 INFO GetFileHandler Handler(tag: 2795, GET) sending length: 1925, 1769117532
+2013-08-27 01:14:04,897+0000 INFO GetFileHandler Handler(tag: 2795, GET) unregistering (last)
+2013-08-27 01:14:04,897+0000 INFO GetFileHandler Handler(tag: 2810, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,897+0000 INFO GetFileHandler Handler(tag: 2810, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,897+0000 INFO GetFileHandler Handler(tag: 2810, GET) -> 693
+2013-08-27 01:14:04,897+0000 INFO GetFileHandler Handler(tag: 693, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,897+0000 INFO GetFileHandler Handler(tag: 693, GET) reader: LR-Handler(tag: 693, GET)
+2013-08-27 01:14:04,897+0000 INFO GetFileHandler Handler(tag: 693, GET) sending length: 14799449, 1648713402
+2013-08-27 01:14:04,897+0000 INFO ReadBuffer RB-LR-Handler(tag: 693, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,897+0000 INFO ReadBuffer RB-LR-Handler(tag: 693, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,897+0000 INFO LocalIOProvider LR-Handler(tag: 693, GET) rbuf: RB-LR-Handler(tag: 693, GET)
+2013-08-27 01:14:04,897+0000 INFO GetFileHandler Handler(tag: 2811, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,898+0000 INFO GetFileHandler Handler(tag: 2811, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,898+0000 INFO GetFileHandler Handler(tag: 2811, GET) -> 694
+2013-08-27 01:14:04,898+0000 INFO GetFileHandler Handler(tag: 694, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,898+0000 INFO GetFileHandler Handler(tag: 694, GET) reader: LR-Handler(tag: 694, GET)
+2013-08-27 01:14:04,898+0000 INFO GetFileHandler Handler(tag: 694, GET) sending length: 14799449, 388855340
+2013-08-27 01:14:04,898+0000 INFO ReadBuffer RB-LR-Handler(tag: 694, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,898+0000 INFO ReadBuffer RB-LR-Handler(tag: 694, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,898+0000 INFO LocalIOProvider LR-Handler(tag: 694, GET) rbuf: RB-LR-Handler(tag: 694, GET)
+2013-08-27 01:14:04,898+0000 INFO GetFileHandler Handler(tag: 2797, GET) sending length: 1925, 711373023
+2013-08-27 01:14:04,898+0000 INFO GetFileHandler Handler(tag: 2797, GET) unregistering (last)
+2013-08-27 01:14:04,899+0000 INFO GetFileHandler Handler(tag: 2812, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,899+0000 INFO GetFileHandler Handler(tag: 2812, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,899+0000 INFO GetFileHandler Handler(tag: 2812, GET) -> 695
+2013-08-27 01:14:04,899+0000 INFO GetFileHandler Handler(tag: 695, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,899+0000 INFO GetFileHandler Handler(tag: 695, GET) reader: LR-Handler(tag: 695, GET)
+2013-08-27 01:14:04,899+0000 INFO GetFileHandler Handler(tag: 695, GET) sending length: 14799449, 1816197624
+2013-08-27 01:14:04,899+0000 INFO ReadBuffer RB-LR-Handler(tag: 695, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,899+0000 INFO ReadBuffer RB-LR-Handler(tag: 695, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,899+0000 INFO LocalIOProvider LR-Handler(tag: 695, GET) rbuf: RB-LR-Handler(tag: 695, GET)
+2013-08-27 01:14:04,899+0000 INFO GetFileHandler Handler(tag: 2799, GET) sending length: 1925, 626708530
+2013-08-27 01:14:04,899+0000 INFO GetFileHandler Handler(tag: 2799, GET) unregistering (last)
+2013-08-27 01:14:04,900+0000 INFO GetFileHandler Handler(tag: 2813, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,900+0000 INFO GetFileHandler Handler(tag: 2813, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,900+0000 INFO GetFileHandler Handler(tag: 2813, GET) -> 696
+2013-08-27 01:14:04,900+0000 INFO GetFileHandler Handler(tag: 696, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz
+2013-08-27 01:14:04,900+0000 INFO GetFileHandler Handler(tag: 696, GET) reader: LR-Handler(tag: 696, GET)
+2013-08-27 01:14:04,900+0000 INFO GetFileHandler Handler(tag: 696, GET) sending length: 14799449, 1574160590
+2013-08-27 01:14:04,900+0000 INFO ReadBuffer RB-LR-Handler(tag: 696, GET) will ask for 8 buffers for a size of 14799449
+2013-08-27 01:14:04,900+0000 INFO ReadBuffer RB-LR-Handler(tag: 696, GET) actual allocated buffers 8(0 queued)
+2013-08-27 01:14:04,900+0000 INFO LocalIOProvider LR-Handler(tag: 696, GET) rbuf: RB-LR-Handler(tag: 696, GET)
+2013-08-27 01:14:04,900+0000 INFO ThrottleManager I maxBuffers=1024, crtBuffers=208, allowedTransfers=119, active=0, suspended=0
+2013-08-27 01:14:04,900+0000 INFO GetFileHandler Handler(tag: 2800, GET) sending length: 5032, 409614416
+2013-08-27 01:14:04,901+0000 INFO GetFileHandler Handler(tag: 2800, GET) unregistering (last)
+2013-08-27 01:14:04,901+0000 INFO GetFileHandler Handler(tag: 2814, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:04,901+0000 INFO GetFileHandler Handler(tag: 2814, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:04,901+0000 INFO GetFileHandler Handler(tag: 2814, GET) -> 697
+2013-08-27 01:14:04,901+0000 INFO GetFileHandler Handler(tag: 697, GET) request complete; src=file://localhost//home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/../libexec/_swiftwrap.staging
+2013-08-27 01:14:04,901+0000 INFO GetFileHandler Handler(tag: 697, GET) reader: LR-Handler(tag: 697, GET)
+2013-08-27 01:14:04,901+0000 INFO GetFileHandler Handler(tag: 697, GET) sending length: 6078, 2010359593
+2013-08-27 01:14:04,901+0000 INFO ReadBuffer RB-LR-Handler(tag: 697, GET) will ask for 1 buffers for a size of 6078
+2013-08-27 01:14:04,902+0000 INFO ReadBuffer RB-LR-Handler(tag: 697, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:04,902+0000 INFO LocalIOProvider LR-Handler(tag: 697, GET) rbuf: RB-LR-Handler(tag: 697, GET)
+2013-08-27 01:14:04,902+0000 INFO GetFileHandler Handler(tag: 697, GET) unregistering (last)
+2013-08-27 01:14:04,902+0000 INFO ReadBuffer RB-LR-Handler(tag: 697, GET) de-allocating 1 buffers
+2013-08-27 01:14:04,906+0000 INFO GetFileHandler Handler(tag: 2801, GET) sending length: 14799449, 505981319
+2013-08-27 01:14:04,908+0000 INFO GetFileHandler Handler(tag: 2802, GET) sending length: 14799449, 1944447489
+2013-08-27 01:14:04,910+0000 INFO GetFileHandler Handler(tag: 2803, GET) sending length: 14799449, 1322260417
+2013-08-27 01:14:04,915+0000 INFO GetFileHandler Handler(tag: 2804, GET) sending length: 14799449, 1561651729
+2013-08-27 01:14:04,919+0000 INFO GetFileHandler Handler(tag: 2805, GET) sending length: 14799449, 540078594
+2013-08-27 01:14:04,921+0000 INFO GetFileHandler Handler(tag: 2806, GET) sending length: 14799449, 1063990225
+2013-08-27 01:14:04,922+0000 INFO GetFileHandler Handler(tag: 2807, GET) sending length: 14799449, 1723247785
+2013-08-27 01:14:04,923+0000 INFO GetFileHandler Handler(tag: 2808, GET) sending length: 14799449, 1477014130
+2013-08-27 01:14:04,925+0000 INFO GetFileHandler Handler(tag: 2809, GET) sending length: 14799449, 1909592106
+2013-08-27 01:14:04,928+0000 INFO GetFileHandler Handler(tag: 2810, GET) sending length: 14799449, 1617017195
+2013-08-27 01:14:04,929+0000 INFO GetFileHandler Handler(tag: 2811, GET) sending length: 14799449, 635077497
+2013-08-27 01:14:04,931+0000 INFO GetFileHandler Handler(tag: 2812, GET) sending length: 14799449, 547346970
+2013-08-27 01:14:04,933+0000 INFO GetFileHandler Handler(tag: 2813, GET) sending length: 14799449, 300243664
+2013-08-27 01:14:04,935+0000 INFO GetFileHandler Handler(tag: 2814, GET) sending length: 6078, 2026604207
+2013-08-27 01:14:04,936+0000 INFO GetFileHandler Handler(tag: 2814, GET) unregistering (last)
+2013-08-27 01:14:04,949+0000 INFO ProxyIOProvider Command(tag: 588, GET) resuming
+2013-08-27 01:14:04,949+0000 INFO GetFileHandler Handler(tag: 588, GET) resuming
+2013-08-27 01:14:04,983+0000 DEBUG Cpu Active workerid=0827-1301520-000001:000000
+2013-08-27 01:14:04,983+0000 INFO RequestHandler Handler(tag: 2815, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:04,983+0000 INFO RequestHandler Handler(tag: 698, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,010+0000 INFO RuntimeStats$ProgressTicker Stage in:31 Active:1 Failed but can retry:1
+2013-08-27 01:14:05,255+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:05,255+0000 INFO RequestHandler Handler(tag: 2816, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,255+0000 INFO RequestHandler Handler(tag: 699, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,255+0000 INFO PutFileHandler Handler(tag: 2817, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/i/runampl-idztedel/wrapper.log
+2013-08-27 01:14:05,255+0000 INFO PutFileHandler Handler(tag: 2817, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-idztedel.info
+2013-08-27 01:14:05,255+0000 INFO PutFileCommand Sending Command(tag: 700, PUT) (t) on cpipe://1
+2013-08-27 01:14:05,255+0000 INFO PutFileCommand Command(tag: 700, PUT) (t) sending data
+2013-08-27 01:14:05,255+0000 INFO PutFileHandler Handler(tag: 2817, PUT) -> 700
+2013-08-27 01:14:05,255+0000 INFO PutFileHandler Handler(tag: 700, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/i/runampl-idztedel/wrapper.log
+2013-08-27 01:14:05,255+0000 INFO PutFileHandler Handler(tag: 700, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-idztedel.info
+2013-08-27 01:14:05,256+0000 DEBUG Cpu Stageout workerid=000000
+2013-08-27 01:14:05,256+0000 INFO RequestHandler Handler(tag: 2818, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,256+0000 INFO RequestHandler Handler(tag: 701, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,256+0000 INFO PutFileHandler Handler(tag: 2819, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/i/runampl-idztedel/wrapper.error
+2013-08-27 01:14:05,256+0000 INFO PutFileHandler Handler(tag: 2819, PUT) destination: proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S/inference4galaxy-20130827-0113-r1k3cjmc/runampl-idztedel.error
+2013-08-27 01:14:05,256+0000 INFO PutFileCommand Sending Command(tag: 702, PUT) (t) on cpipe://1
+2013-08-27 01:14:05,256+0000 INFO PutFileHandler Handler(tag: 702, PUT) source: /tmp/swift.work/inference4galaxy-20130827-0113-r1k3cjmc/jobs/i/runampl-idztedel/wrapper.error
+2013-08-27 01:14:05,256+0000 INFO PutFileCommand Command(tag: 702, PUT) (t) sending data
+2013-08-27 01:14:05,256+0000 INFO PutFileHandler Handler(tag: 2819, PUT) -> 702
+2013-08-27 01:14:05,256+0000 INFO PutFileHandler Handler(tag: 702, PUT) destination: file://localhost/inference4galaxy-20130827-0113-r1k3cjmc/runampl-idztedel.error
+2013-08-27 01:14:05,257+0000 INFO PutFileHandler Handler(tag: 700, PUT) Transfer done
+2013-08-27 01:14:05,257+0000 INFO RequestHandler Handler(tag: 700, PUT) unregistering (send)
+2013-08-27 01:14:05,257+0000 INFO PutFileHandler Handler(tag: 702, PUT) Transfer done
+2013-08-27 01:14:05,257+0000 INFO RequestHandler Handler(tag: 702, PUT) unregistering (send)
+2013-08-27 01:14:05,267+0000 INFO GetFileHandler Handler(tag: 3288, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:05,267+0000 INFO GetFileHandler Handler(tag: 3288, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:05,267+0000 INFO GetFileHandler Handler(tag: 3288, GET) -> 703
+2013-08-27 01:14:05,267+0000 INFO GetFileHandler Handler(tag: 703, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc
+2013-08-27 01:14:05,267+0000 INFO GetFileHandler Handler(tag: 703, GET) reader: LR-Handler(tag: 703, GET)
+2013-08-27 01:14:05,267+0000 INFO GetFileHandler Handler(tag: 703, GET) sending length: 543, 119759377
+2013-08-27 01:14:05,267+0000 INFO ReadBuffer RB-LR-Handler(tag: 703, GET) will ask for 1 buffers for a size of 543
+2013-08-27 01:14:05,267+0000 INFO ReadBuffer RB-LR-Handler(tag: 703, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:05,267+0000 INFO LocalIOProvider LR-Handler(tag: 703, GET) rbuf: RB-LR-Handler(tag: 703, GET)
+2013-08-27 01:14:05,267+0000 INFO GetFileHandler Handler(tag: 703, GET) unregistering (last)
+2013-08-27 01:14:05,267+0000 INFO ReadBuffer RB-LR-Handler(tag: 703, GET) de-allocating 1 buffers
+2013-08-27 01:14:05,277+0000 INFO ProxyIOProvider Command(tag: 591, GET) resuming
+2013-08-27 01:14:05,277+0000 INFO GetFileHandler Handler(tag: 591, GET) resuming
+2013-08-27 01:14:05,279+0000 INFO GetFileHandler Handler(tag: 3289, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:05,279+0000 INFO GetFileHandler Handler(tag: 3289, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:05,279+0000 INFO GetFileHandler Handler(tag: 3289, GET) -> 704
+2013-08-27 01:14:05,279+0000 INFO GetFileHandler Handler(tag: 704, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:05,279+0000 INFO GetFileHandler Handler(tag: 704, GET) reader: LR-Handler(tag: 704, GET)
+2013-08-27 01:14:05,279+0000 INFO GetFileHandler Handler(tag: 704, GET) sending length: 5032, 1202555572
+2013-08-27 01:14:05,279+0000 INFO ReadBuffer RB-LR-Handler(tag: 704, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:05,279+0000 INFO ReadBuffer RB-LR-Handler(tag: 704, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:05,279+0000 INFO LocalIOProvider LR-Handler(tag: 704, GET) rbuf: RB-LR-Handler(tag: 704, GET)
+2013-08-27 01:14:05,279+0000 INFO GetFileHandler Handler(tag: 704, GET) unregistering (last)
+2013-08-27 01:14:05,279+0000 INFO ReadBuffer RB-LR-Handler(tag: 704, GET) de-allocating 1 buffers
+2013-08-27 01:14:05,279+0000 INFO GetFileHandler Handler(tag: 3290, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:05,279+0000 INFO GetFileHandler Handler(tag: 3290, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:05,279+0000 INFO GetFileHandler Handler(tag: 3290, GET) -> 705
+2013-08-27 01:14:05,279+0000 INFO GetFileHandler Handler(tag: 705, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:05,279+0000 INFO GetFileHandler Handler(tag: 705, GET) reader: LR-Handler(tag: 705, GET)
+2013-08-27 01:14:05,280+0000 INFO GetFileHandler Handler(tag: 705, GET) sending length: 5032, 129106928
+2013-08-27 01:14:05,280+0000 INFO ReadBuffer RB-LR-Handler(tag: 705, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:05,280+0000 INFO ReadBuffer RB-LR-Handler(tag: 705, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:05,280+0000 INFO LocalIOProvider LR-Handler(tag: 705, GET) rbuf: RB-LR-Handler(tag: 705, GET)
+2013-08-27 01:14:05,280+0000 INFO GetFileHandler Handler(tag: 705, GET) unregistering (last)
+2013-08-27 01:14:05,280+0000 INFO ReadBuffer RB-LR-Handler(tag: 705, GET) de-allocating 1 buffers
+2013-08-27 01:14:05,280+0000 INFO GetFileHandler Handler(tag: 3291, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:05,280+0000 INFO GetFileHandler Handler(tag: 3291, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:05,280+0000 INFO GetFileHandler Handler(tag: 3291, GET) -> 706
+2013-08-27 01:14:05,280+0000 INFO GetFileHandler Handler(tag: 706, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:05,280+0000 INFO GetFileHandler Handler(tag: 706, GET) reader: LR-Handler(tag: 706, GET)
+2013-08-27 01:14:05,280+0000 INFO GetFileHandler Handler(tag: 706, GET) sending length: 5032, 1595750039
+2013-08-27 01:14:05,280+0000 INFO ReadBuffer RB-LR-Handler(tag: 706, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:05,280+0000 INFO ReadBuffer RB-LR-Handler(tag: 706, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:05,280+0000 INFO LocalIOProvider LR-Handler(tag: 706, GET) rbuf: RB-LR-Handler(tag: 706, GET)
+2013-08-27 01:14:05,280+0000 INFO GetFileHandler Handler(tag: 706, GET) unregistering (last)
+2013-08-27 01:14:05,280+0000 INFO ReadBuffer RB-LR-Handler(tag: 706, GET) de-allocating 1 buffers
+2013-08-27 01:14:05,280+0000 INFO GetFileHandler Handler(tag: 3292, GET) request complete; src=proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:05,280+0000 INFO GetFileHandler Handler(tag: 3292, GET) reader: PR proxy://u45ce06b6-140bd55810a--7fff-u45ce06b6-140bd55810a--8000S//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:05,280+0000 INFO GetFileHandler Handler(tag: 3292, GET) -> 707
+2013-08-27 01:14:05,280+0000 INFO GetFileHandler Handler(tag: 707, GET) request complete; src=file://localhost//scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod
+2013-08-27 01:14:05,280+0000 INFO GetFileHandler Handler(tag: 707, GET) reader: LR-Handler(tag: 707, GET)
+2013-08-27 01:14:05,280+0000 INFO GetFileHandler Handler(tag: 707, GET) sending length: 5032, 1201369501
+2013-08-27 01:14:05,280+0000 INFO ReadBuffer RB-LR-Handler(tag: 707, GET) will ask for 1 buffers for a size of 5032
+2013-08-27 01:14:05,280+0000 INFO ReadBuffer RB-LR-Handler(tag: 707, GET) actual allocated buffers 1(0 queued)
+2013-08-27 01:14:05,280+0000 INFO LocalIOProvider LR-Handler(tag: 707, GET) rbuf: RB-LR-Handler(tag: 707, GET)
+2013-08-27 01:14:05,280+0000 INFO GetFileHandler Handler(tag: 707, GET) unregistering (last)
+2013-08-27 01:14:05,280+0000 INFO ReadBuffer RB-LR-Handler(tag: 707, GET) de-allocating 1 buffers
+2013-08-27 01:14:05,312+0000 INFO PutFileHandler Handler(tag: 2817, PUT) Transfer done
+2013-08-27 01:14:05,312+0000 INFO RequestHandler Handler(tag: 2817, PUT) unregistering (send)
+2013-08-27 01:14:05,312+0000 INFO PutFileHandler Handler(tag: 2819, PUT) Transfer done
+2013-08-27 01:14:05,312+0000 INFO RequestHandler Handler(tag: 2819, PUT) unregistering (send)
+2013-08-27 01:14:05,322+0000 INFO GetFileHandler Handler(tag: 3288, GET) sending length: 543, 1941753307
+2013-08-27 01:14:05,322+0000 INFO GetFileHandler Handler(tag: 3288, GET) unregistering (last)
+2013-08-27 01:14:05,336+0000 INFO GetFileHandler Handler(tag: 3289, GET) sending length: 5032, 262977498
+2013-08-27 01:14:05,337+0000 INFO GetFileHandler Handler(tag: 3289, GET) unregistering (last)
+2013-08-27 01:14:05,337+0000 INFO GetFileHandler Handler(tag: 3290, GET) sending length: 5032, 898386736
+2013-08-27 01:14:05,337+0000 INFO GetFileHandler Handler(tag: 3290, GET) unregistering (last)
+2013-08-27 01:14:05,337+0000 INFO GetFileHandler Handler(tag: 3291, GET) sending length: 5032, 323408076
+2013-08-27 01:14:05,338+0000 INFO GetFileHandler Handler(tag: 3291, GET) unregistering (last)
+2013-08-27 01:14:05,339+0000 INFO GetFileHandler Handler(tag: 3292, GET) sending length: 5032, 2114577770
+2013-08-27 01:14:05,339+0000 INFO GetFileHandler Handler(tag: 3292, GET) unregistering (last)
+2013-08-27 01:14:05,391+0000 INFO ThrottleManager O maxBuffers=1024, crtBuffers=1023, allowedTransfers=0, active=0, suspended=0
+2013-08-27 01:14:05,391+0000 INFO ThrottleManager mem=174.48 MB, heap=398.88 MB, maxHeap=910.25 MB
+2013-08-27 01:14:05,400+0000 INFO ThrottleManager I maxBuffers=1024, crtBuffers=208, allowedTransfers=119, active=0, suspended=0
+2013-08-27 01:14:05,444+0000 INFO GetFileHandler Handler(tag: 567, GET) unregistering (last)
+2013-08-27 01:14:05,444+0000 INFO ReadBuffer RB-LR-Handler(tag: 567, GET) de-allocating 8 buffers
+2013-08-27 01:14:05,501+0000 INFO GetFileHandler Handler(tag: 3272, GET) unregistering (last)
+2013-08-27 01:14:05,613+0000 DEBUG Cpu Failed Job failed with and exit code of 1
+2013-08-27 01:14:05,613+0000 INFO Cpu 0827-1301520-000001:5 jobTerminated
+2013-08-27 01:14:05,613+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=5
+2013-08-27 01:14:05,613+0000 INFO RequestHandler Handler(tag: 2820, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,613+0000 DEBUG Cpu requesting work: block=0827-1301520-000001 id=5 Cpus sleeping: 1
+2013-08-27 01:14:05,613+0000 DEBUG Cpu 0827-1301520-000001:5 sleeping
+2013-08-27 01:14:05,614+0000 INFO RequestHandler Handler(tag: 708, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,615+0000 INFO LateBindingScheduler jobs queued: 1
+2013-08-27 01:14:05,615+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-idztedel - Application exception: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+
+Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1
+org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with and exit code of 1 (exit code: 1)
+ at org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
+ at org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
+ at org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
+ at org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
+ at org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
+ (exit code: 1)
+2013-08-27 01:14:05,615+0000 INFO swift END_FAILURE thread=R-42-0-1x2-17-0 tr=runampl
+2013-08-27 01:14:05,617+0000 INFO Loader Swift finished with errors
+2013-08-27 01:14:05,618+0000 INFO ServiceManager Cleaning up...
+2013-08-27 01:14:05,618+0000 INFO ServiceManager Shutting down service at https://128.135.112.73:50002
+2013-08-27 01:14:05,674+0000 INFO RequestHandler Handler(tag: 66, SHUTDOWNSERVICE) unregistering (send)
+2013-08-27 01:14:05,715+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-zdztedel thread=R-42-0-1x2-12-0 host=midway replicationGroup=null
+2013-08-27 01:14:05,715+0000 DEBUG swift JOB_START jobid=runampl-zdztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0012.out, outdir/xhat_l20000_0001.0012.out, obj_outdir/obj_out_l0000_0001.0012.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0012.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/z/runampl-zdztedel host=midway
+2013-08-27 01:14:05,775+0000 INFO RequestHandler Handler(tag: 709, UNREGISTER) unregistering (send)
+2013-08-27 01:14:05,778+0000 INFO BlockQueueProcessor Shutting down blocks
+2013-08-27 01:14:05,778+0000 INFO Block Shutting down block Block 0827-1301520-000000 (16x7440.000s)
+2013-08-27 01:14:05,778+0000 INFO Cpu 0827-1301520-000000-0: Job still running while shutting down
+2013-08-27 01:14:05,778+0000 INFO RemoteLogHandler BLOCK_SHUTDOWN id=0827-1301520-000000
+2013-08-27 01:14:05,778+0000 INFO RequestHandler Handler(tag: 710, RLOG) unregistering (send)
+2013-08-27 01:14:05,778+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,778+0000 INFO Cpu 0827-1301520-000000:0 jobTerminated
+2013-08-27 01:14:05,778+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=0
+2013-08-27 01:14:05,779+0000 INFO RequestHandler Handler(tag: 711, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,779+0000 INFO Cpu 0827-1301520-000000-1: Job still running while shutting down
+2013-08-27 01:14:05,779+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,779+0000 INFO Cpu 0827-1301520-000000:1 jobTerminated
+2013-08-27 01:14:05,779+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=1
+2013-08-27 01:14:05,779+0000 INFO Cpu 0827-1301520-000000-2: Job still running while shutting down
+2013-08-27 01:14:05,779+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,779+0000 INFO Cpu 0827-1301520-000000:2 jobTerminated
+2013-08-27 01:14:05,779+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=2
+2013-08-27 01:14:05,779+0000 INFO Cpu 0827-1301520-000000-3: Job still running while shutting down
+2013-08-27 01:14:05,779+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,779+0000 INFO RequestHandler Handler(tag: 712, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,779+0000 INFO Cpu 0827-1301520-000000:3 jobTerminated
+2013-08-27 01:14:05,779+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=3
+2013-08-27 01:14:05,779+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-edztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,779+0000 INFO Cpu 0827-1301520-000000-4: Job still running while shutting down
+2013-08-27 01:14:05,779+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,779+0000 INFO Cpu 0827-1301520-000000:4 jobTerminated
+2013-08-27 01:14:05,779+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=4
+2013-08-27 01:14:05,779+0000 INFO Cpu 0827-1301520-000000-5: Job still running while shutting down
+2013-08-27 01:14:05,779+0000 INFO RequestHandler Handler(tag: 713, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,780+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,780+0000 INFO RequestHandler Handler(tag: 714, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,780+0000 INFO Cpu 0827-1301520-000000:5 jobTerminated
+2013-08-27 01:14:05,780+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=5
+2013-08-27 01:14:05,780+0000 INFO Cpu 0827-1301520-000000-6: Job still running while shutting down
+2013-08-27 01:14:05,780+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,780+0000 INFO Cpu 0827-1301520-000000:6 jobTerminated
+2013-08-27 01:14:05,780+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=6
+2013-08-27 01:14:05,780+0000 INFO Cpu 0827-1301520-000000-7: Job still running while shutting down
+2013-08-27 01:14:05,780+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,780+0000 INFO RequestHandler Handler(tag: 715, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,780+0000 INFO swift END_FAILURE thread=R-42-0-1x2-10-0 tr=runampl
+2013-08-27 01:14:05,780+0000 INFO Cpu 0827-1301520-000000:7 jobTerminated
+2013-08-27 01:14:05,780+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=7
+2013-08-27 01:14:05,780+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-gdztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,780+0000 INFO Cpu 0827-1301520-000000-8: Job still running while shutting down
+2013-08-27 01:14:05,780+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,780+0000 INFO Cpu 0827-1301520-000000:8 jobTerminated
+2013-08-27 01:14:05,780+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=8
+2013-08-27 01:14:05,780+0000 INFO Cpu 0827-1301520-000000-9: Job still running while shutting down
+2013-08-27 01:14:05,780+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,780+0000 INFO Cpu 0827-1301520-000000:9 jobTerminated
+2013-08-27 01:14:05,780+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=9
+2013-08-27 01:14:05,780+0000 INFO Cpu 0827-1301520-000000-10: Job still running while shutting down
+2013-08-27 01:14:05,780+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,780+0000 INFO swift END_FAILURE thread=R-42-0-1x2-5-0 tr=runampl
+2013-08-27 01:14:05,782+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-5dztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,782+0000 INFO Cpu 0827-1301520-000000:10 jobTerminated
+2013-08-27 01:14:05,782+0000 INFO RequestHandler Handler(tag: 716, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,782+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=10
+2013-08-27 01:14:05,782+0000 INFO Cpu 0827-1301520-000000-11: Job still running while shutting down
+2013-08-27 01:14:05,782+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,782+0000 INFO Cpu 0827-1301520-000000:11 jobTerminated
+2013-08-27 01:14:05,782+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=11
+2013-08-27 01:14:05,782+0000 INFO Cpu 0827-1301520-000000-12: Job still running while shutting down
+2013-08-27 01:14:05,782+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,782+0000 INFO Cpu 0827-1301520-000000:12 jobTerminated
+2013-08-27 01:14:05,782+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=12
+2013-08-27 01:14:05,782+0000 INFO swift END_FAILURE thread=R-42-0-1-0-3-0 tr=runampl
+2013-08-27 01:14:05,782+0000 INFO Cpu 0827-1301520-000000-13: Job still running while shutting down
+2013-08-27 01:14:05,782+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,782+0000 INFO Cpu 0827-1301520-000000:13 jobTerminated
+2013-08-27 01:14:05,782+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=13
+2013-08-27 01:14:05,782+0000 INFO Cpu 0827-1301520-000000-14: Job still running while shutting down
+2013-08-27 01:14:05,782+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,782+0000 INFO Cpu 0827-1301520-000000:14 jobTerminated
+2013-08-27 01:14:05,782+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=14
+2013-08-27 01:14:05,782+0000 INFO Cpu 0827-1301520-000000-15: Job still running while shutting down
+2013-08-27 01:14:05,782+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,782+0000 INFO Cpu 0827-1301520-000000:15 jobTerminated
+2013-08-27 01:14:05,782+0000 DEBUG Cpu ready for work: block=0827-1301520-000000 id=15
+2013-08-27 01:14:05,782+0000 INFO Block Adding short shutdown watchdog: count = 16, workers = 16, now = true
+2013-08-27 01:14:05,782+0000 INFO Block Average utilization: 98.53%
+2013-08-27 01:14:05,780+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-4dztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,781+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-9dztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,782+0000 INFO Block Shutting down block Block 0827-1301520-000001 (16x7440.000s)
+2013-08-27 01:14:05,782+0000 INFO Cpu 0827-1301520-000001-0: Job still running while shutting down
+2013-08-27 01:14:05,782+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,782+0000 INFO Cpu 0827-1301520-000001:0 jobTerminated
+2013-08-27 01:14:05,782+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=0
+2013-08-27 01:14:05,783+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-3dztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,783+0000 INFO RequestHandler Handler(tag: 717, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,783+0000 INFO Cpu 0827-1301520-000001-1: Job still running while shutting down
+2013-08-27 01:14:05,783+0000 INFO swift END_FAILURE thread=R-42-0-1x2-19-0 tr=runampl
+2013-08-27 01:14:05,783+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,783+0000 INFO Cpu 0827-1301520-000001:1 jobTerminated
+2013-08-27 01:14:05,783+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=1
+2013-08-27 01:14:05,783+0000 INFO Cpu 0827-1301520-000001-2: Job still running while shutting down
+2013-08-27 01:14:05,783+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,783+0000 INFO Cpu 0827-1301520-000001:2 jobTerminated
+2013-08-27 01:14:05,783+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=2
+2013-08-27 01:14:05,783+0000 INFO swift END_FAILURE thread=R-42-0-1x3-0 tr=runampl
+2013-08-27 01:14:05,783+0000 INFO swift END_FAILURE thread=R-42-0-1x2-18-0 tr=runampl
+2013-08-27 01:14:05,783+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-2dztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,783+0000 INFO Cpu 0827-1301520-000001-3: Job still running while shutting down
+2013-08-27 01:14:05,783+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,783+0000 INFO Cpu 0827-1301520-000001:3 jobTerminated
+2013-08-27 01:14:05,783+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=3
+2013-08-27 01:14:05,783+0000 INFO Cpu 0827-1301520-000001-4: Job still running while shutting down
+2013-08-27 01:14:05,783+0000 INFO RequestHandler Handler(tag: 718, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,783+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,783+0000 INFO Cpu 0827-1301520-000001:4 jobTerminated
+2013-08-27 01:14:05,783+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=4
+2013-08-27 01:14:05,784+0000 INFO RequestHandler Handler(tag: 719, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,784+0000 INFO Cpu 0827-1301520-000001-6: Job still running while shutting down
+2013-08-27 01:14:05,784+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,784+0000 INFO Cpu 0827-1301520-000001:6 jobTerminated
+2013-08-27 01:14:05,784+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=6
+2013-08-27 01:14:05,784+0000 INFO Cpu 0827-1301520-000001-7: Job still running while shutting down
+2013-08-27 01:14:05,784+0000 INFO RequestHandler Handler(tag: 720, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,784+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,784+0000 INFO RequestHandler Handler(tag: 721, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,784+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-6dztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,784+0000 INFO RequestHandler Handler(tag: 722, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,784+0000 DEBUG swift THREAD_ASSOCIATION jobid=runampl-0eztedel thread=R-42-0-1x2-20-0 host=midway replicationGroup=null
+2013-08-27 01:14:05,785+0000 INFO RequestHandler Handler(tag: 723, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,785+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-adztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,785+0000 INFO Cpu 0827-1301520-000001:7 jobTerminated
+2013-08-27 01:14:05,785+0000 INFO RequestHandler Handler(tag: 724, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,785+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=7
+2013-08-27 01:14:05,785+0000 INFO Cpu 0827-1301520-000001-8: Job still running while shutting down
+2013-08-27 01:14:05,785+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,785+0000 INFO Cpu 0827-1301520-000001:8 jobTerminated
+2013-08-27 01:14:05,785+0000 INFO swift END_FAILURE thread=R-42-0-1x2-6-0 tr=runampl
+2013-08-27 01:14:05,785+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=8
+2013-08-27 01:14:05,785+0000 DEBUG swift JOB_START jobid=runampl-0eztedel tr=runampl arguments=[10, 0, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run, outdir/xhat_l10000_0001.0020.out, outdir/xhat_l20000_0001.0020.out, obj_outdir/obj_out_l0000_0001.0020.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc, Results/ampl_res_l0000_0001.0020.out, __root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat] tmpdir=inference4galaxy-20130827-0113-r1k3cjmc/jobs/0/runampl-0eztedel host=midway
+2013-08-27 01:14:05,785+0000 INFO Cpu 0827-1301520-000001-9: Job still running while shutting down
+2013-08-27 01:14:05,785+0000 INFO swift END_FAILURE thread=R-42-0-1x2-8-0 tr=runampl
+2013-08-27 01:14:05,785+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-fdztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,785+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-ddztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,785+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,785+0000 INFO Cpu 0827-1301520-000001:9 jobTerminated
+2013-08-27 01:14:05,785+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-cdztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,785+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=9
+2013-08-27 01:14:05,785+0000 INFO swift END_FAILURE thread=R-42-0-1x2-14-0 tr=runampl
+2013-08-27 01:14:05,785+0000 INFO Cpu 0827-1301520-000001-10: Job still running while shutting down
+2013-08-27 01:14:05,785+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,785+0000 INFO Cpu 0827-1301520-000001:10 jobTerminated
+2013-08-27 01:14:05,785+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-7dztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,785+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=10
+2013-08-27 01:14:05,785+0000 INFO Cpu 0827-1301520-000001-11: Job still running while shutting down
+2013-08-27 01:14:05,785+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,785+0000 INFO Cpu 0827-1301520-000001:11 jobTerminated
+2013-08-27 01:14:05,785+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=11
+2013-08-27 01:14:05,785+0000 INFO Cpu 0827-1301520-000001-12: Job still running while shutting down
+2013-08-27 01:14:05,785+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,785+0000 INFO Cpu 0827-1301520-000001:12 jobTerminated
+2013-08-27 01:14:05,785+0000 INFO swift END_FAILURE thread=R-42-0-1-0-6-0 tr=runampl
+2013-08-27 01:14:05,785+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=12
+2013-08-27 01:14:05,785+0000 INFO Cpu 0827-1301520-000001-13: Job still running while shutting down
+2013-08-27 01:14:05,785+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,785+0000 INFO swift END_FAILURE thread=R-42-0-1-0-2-0 tr=runampl
+2013-08-27 01:14:05,785+0000 INFO Cpu 0827-1301520-000001:13 jobTerminated
+2013-08-27 01:14:05,785+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=13
+2013-08-27 01:14:05,786+0000 INFO Cpu 0827-1301520-000001-14: Job still running while shutting down
+2013-08-27 01:14:05,786+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,786+0000 INFO Cpu 0827-1301520-000001:14 jobTerminated
+2013-08-27 01:14:05,786+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=14
+2013-08-27 01:14:05,786+0000 INFO Cpu 0827-1301520-000001-15: Job still running while shutting down
+2013-08-27 01:14:05,786+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-bdztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,786+0000 DEBUG Cpu Failed Shutting down worker
+2013-08-27 01:14:05,786+0000 INFO swift END_FAILURE thread=R-42-0-1x2-4-0 tr=runampl
+2013-08-27 01:14:05,786+0000 INFO Cpu 0827-1301520-000001:15 jobTerminated
+2013-08-27 01:14:05,786+0000 DEBUG Cpu ready for work: block=0827-1301520-000001 id=15
+2013-08-27 01:14:05,786+0000 INFO Block Adding short shutdown watchdog: count = 16, workers = 16, now = true
+2013-08-27 01:14:05,786+0000 INFO Block Average utilization: 98.76%
+2013-08-27 01:14:05,786+0000 INFO CoasterService Shutdown sequence completed
+2013-08-27 01:14:05,786+0000 INFO swift END_FAILURE thread=R-42-0-1-0-7-0 tr=runampl
+2013-08-27 01:14:05,786+0000 INFO RequestHandler Handler(tag: 725, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,786+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-8dztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,786+0000 INFO swift END_FAILURE thread=R-42-0-1x2-15-0 tr=runampl
+2013-08-27 01:14:05,787+0000 INFO RequestHandler Handler(tag: 726, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,787+0000 INFO RemoteLogHandler BLOCK_UTILIZATION id=0827-1301520-000000, u=98.53
+2013-08-27 01:14:05,787+0000 INFO RequestHandler Handler(tag: 727, RLOG) unregistering (send)
+2013-08-27 01:14:05,787+0000 INFO RemoteLogHandler BLOCK_SHUTDOWN id=0827-1301520-000001
+2013-08-27 01:14:05,787+0000 INFO RequestHandler Handler(tag: 728, RLOG) unregistering (send)
+2013-08-27 01:14:05,787+0000 INFO RequestHandler Handler(tag: 729, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,788+0000 INFO RequestHandler Handler(tag: 730, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,788+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-hdztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,788+0000 INFO RequestHandler Handler(tag: 731, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,788+0000 INFO swift END_FAILURE thread=R-42-0-1-0-5-0 tr=runampl
+2013-08-27 01:14:05,788+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-jdztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,788+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-ndztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,788+0000 INFO swift END_FAILURE thread=R-42-0-1-0-9-0 tr=runampl
+2013-08-27 01:14:05,788+0000 INFO swift END_FAILURE thread=R-42-0-1x2-2-0 tr=runampl
+2013-08-27 01:14:05,789+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-kdztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,789+0000 INFO RequestHandler Handler(tag: 732, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,789+0000 INFO RequestHandler Handler(tag: 733, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,789+0000 INFO swift END_FAILURE thread=R-42-0-1x2-3-0 tr=runampl
+2013-08-27 01:14:05,789+0000 INFO RequestHandler Handler(tag: 734, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,789+0000 INFO RequestHandler Handler(tag: 735, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,790+0000 INFO RequestHandler Handler(tag: 736, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,790+0000 INFO RequestHandler Handler(tag: 737, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,790+0000 INFO RequestHandler Handler(tag: 738, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,795+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-mdztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,795+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-udztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,795+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-rdztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,795+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-xdztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,795+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-ldztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,795+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-pdztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,796+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-vdztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,796+0000 INFO RequestHandler Handler(tag: 739, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,796+0000 INFO RequestHandler Handler(tag: 740, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,796+0000 INFO swift END_FAILURE thread=R-42-0-1x2-9-0 tr=runampl
+2013-08-27 01:14:05,797+0000 INFO RequestHandler Handler(tag: 741, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,797+0000 INFO swift END_FAILURE thread=R-42-0-1x2-0x2 tr=runampl
+2013-08-27 01:14:05,797+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-tdztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,797+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-odztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,797+0000 INFO swift END_FAILURE thread=R-42-0-1-0x3 tr=runampl
+2013-08-27 01:14:05,797+0000 INFO swift END_FAILURE thread=R-42-0-1-0-10-0 tr=runampl
+2013-08-27 01:14:05,797+0000 INFO swift END_FAILURE thread=R-42-0-1x2-11-0 tr=runampl
+2013-08-27 01:14:05,797+0000 INFO swift END_FAILURE thread=R-42-0-1x2-13-0 tr=runampl
+2013-08-27 01:14:05,797+0000 INFO swift END_FAILURE thread=R-42-0-1-0-1-0 tr=runampl
+2013-08-27 01:14:05,797+0000 INFO swift END_FAILURE thread=R-42-0-1-0-4-0 tr=runampl
+2013-08-27 01:14:05,797+0000 INFO RequestHandler Handler(tag: 67, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:05,797+0000 INFO swift END_FAILURE thread=R-42-0-1x2-16-0 tr=runampl
+2013-08-27 01:14:05,798+0000 INFO RequestHandler Handler(tag: 68, SUBMITJOB) unregistering (send)
+2013-08-27 01:14:05,799+0000 INFO GetFileHandler Handler(tag: 568, GET) unregistering (last)
+2013-08-27 01:14:05,799+0000 INFO ReadBuffer RB-LR-Handler(tag: 568, GET) de-allocating 8 buffers
+2013-08-27 01:14:05,800+0000 INFO RequestHandler Handler(tag: 742, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,801+0000 INFO RequestHandler Handler(tag: 743, JOBSTATUS) unregistering (send)
+2013-08-27 01:14:05,801+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-ydztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,801+0000 DEBUG swift APPLICATION_EXCEPTION jobid=runampl-sdztedel - Application exception: Shutting down worker
+
+2013-08-27 01:14:05,801+0000 INFO swift END_FAILURE thread=R-42-0-1x2-7-0 tr=runampl
+2013-08-27 01:14:05,801+0000 INFO swift END_FAILURE thread=R-42-0-1-0-8-0 tr=runampl
+2013-08-27 01:14:05,802+0000 INFO RemoteLogHandler BLOCK_UTILIZATION id=0827-1301520-000001, u=98.76
+2013-08-27 01:14:05,802+0000 INFO RequestHandler Handler(tag: 744, RLOG) unregistering (send)
+2013-08-27 01:14:05,803+0000 INFO GetFileHandler Handler(tag: 3273, GET) unregistering (last)
Added: SwiftApps/swift-galaxy/swift/datlist.txt
===================================================================
--- SwiftApps/swift-galaxy/swift/datlist.txt (rev 0)
+++ SwiftApps/swift-galaxy/swift/datlist.txt 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,10 @@
+sample.000.txt
+sample.001.txt
+sample.002.txt
+sample.003.txt
+sample.004.txt
+sample.005.txt
+sample.006.txt
+sample.007.txt
+sample.008.txt
+sample.009.txt
Added: SwiftApps/swift-galaxy/swift/delog
===================================================================
--- SwiftApps/swift-galaxy/swift/delog (rev 0)
+++ SwiftApps/swift-galaxy/swift/delog 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1 @@
+rm -rfv *.d *.rlog *.log swift.work *.out outdir xhat_outdir obj_outdir /tmp/swift.work Results /scratch/midway/maheshwari/swift.workdir
Property changes on: SwiftApps/swift-galaxy/swift/delog
___________________________________________________________________
Added: svn:executable
+ *
Added: SwiftApps/swift-galaxy/swift/dogftp.sh
===================================================================
--- SwiftApps/swift-galaxy/swift/dogftp.sh (rev 0)
+++ SwiftApps/swift-galaxy/swift/dogftp.sh 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,16 @@
+#!/bin/bash -x
+
+#stagein
+#eg. globus-url-copy file:///work/01739/ketan/JSC_AdaptiveSchedule/workflow/sample.txt gsiftp://gridftp.stampede.tacc.utexas.edu:2811/scratch/01739/ketan/storage/
+
+src=$1
+dest=$2
+token=$3
+
+#echo $src > $token
+#echo $dest >> $token
+
+globus-url-copy $src $dest
+#ssh -i /home1/01739/ketan/.ssh/id_rsa maheshwari at swift.rcc.uchicago.edu globus-url-copy gsiftp://trestles-dm2.sdsc.edu:2811/home/ketan/storage/$src gsiftp://gridftp.stampede.tacc.utexas.edu:2811/work/01739/ketan/JSC_AdaptiveSchedule/workflow/dir/$dest
+
+echo $? > $token
Property changes on: SwiftApps/swift-galaxy/swift/dogftp.sh
___________________________________________________________________
Added: svn:executable
+ *
Added: SwiftApps/swift-galaxy/swift/dssat.xml
===================================================================
--- SwiftApps/swift-galaxy/swift/dssat.xml (rev 0)
+++ SwiftApps/swift-galaxy/swift/dssat.xml 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,27 @@
+<tool id="dssat" name="Swift - DSSAT">
+ <description>Swift - DSSAT</description>
+
+ <command interpreter="bash">
+ /scratch/midway/maheshwari/DSSAT.cloud/DSSAT/dssat-galaxy.sh $njobs $template
+ </command>
+
+ <inputs>
+ <profile name="dataset" type="select" label="Data set">
+ <option value="smalltest">Small test</option>
+ <option value="test">Test</option>
+ </profile>
+ <param name="template" type="select" label="Execution Location">
+ <option value="midway">Midway</option>
+ <option value="uc3">UC3</option>
+ <option value="localhost">Localhost</option>
+ <option value="stampede">Stampede</option>
+ </param>
+ <param name="njobs" type="text" value="1" label="Number of jobs to run (Valid ranges 1 - 100000)"/>
+ </inputs>
+
+ <outputs>
+ <data format="txt" type="data" name="log_file"/>
+ </outputs>
+
+</tool>
+
Added: SwiftApps/swift-galaxy/swift/edrevised.mod
===================================================================
--- SwiftApps/swift-galaxy/swift/edrevised.mod (rev 0)
+++ SwiftApps/swift-galaxy/swift/edrevised.mod 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,115 @@
+# ampl model declaration
+# V. M. Zavala - MCS/ANL 2012
+
+# scenarios
+param NS; # number of scenarios
+set SCEN := 1..NS; # set of scenarios
+
+# dispatch horizon
+param T; # horizon length
+param TH; # simulation horizon (hours)
+param dt; # length of time step [hr]
+set HORIZON := 0..T-1; # horizon minus one
+set TESTTIME:=0..T; # set of test times
+param idx_data; # auxiliary parameter
+param idx_state; # auxiliary parameter
+
+# lines
+set LIN; # set of lines
+param status{LIN}, symbolic; # line status
+param snd_bus{LIN}; # sending bus
+param rec_bus{LIN}; # receiving bus
+param X{LIN}; # reactance - Ohm
+param V{LIN}; # voltage drop - kV
+param Pmax{LIN}; # maximum line capacity - MW
+param install_cost{LIN}; # annualized installation cost $/yr
+
+# buses
+set BUS; # set of buses
+param lat_bus{BUS}; # latitude of bus
+param lon_bus{BUS}; # longitude of bus
+param ref_bus, symbolic; # reference bus
+
+# generators
+set GEN;
+param bus_gen{GEN}; # generator bus
+param np_cap{GEN}; # name place capacity - MW
+param sum_cap{GEN}; # summer capacity - MW
+param win_cap{GEN}; # winter capacity - MW
+param min_cap{GEN}; # minimum capacity - MW
+param fuel{GEN}, symbolic; # type of fuel for generator
+param min_hrate{GEN}; # heat rate at minimum capacity - BTU/kWh
+param min_power{GEN}; # power at minimum capacity - MW
+param max_ur{GEN}; # minimum up ramp - MW
+param max_dr{GEN}; # maximum down ramp - MW
+param lat_gen{GEN}; # latitude of generation bus
+param lon_gen{GEN}; # longitude of generation bus
+param gen_cost{GEN}; # generation cost $/MWhr
+param Pgen_init{GEN}; # initial conditions generators MW
+param clgen_cost{TESTTIME}; # closed-loop generation cost $/MWh
+
+# fuels
+set FUEL;
+param Description{FUEL}, symbolic; # fuel description
+param HV{FUEL}; # heating value (Mbtu/unit)
+param Unitprice{FUEL}; # unit price ($/unit)
+param Units{FUEL}, symbolic; # units
+
+# loads
+set TIME; # set of times for loads
+set LOAD; # set of loads
+param bus_load{LOAD}; # load bus
+param loads{TIME,LOAD}; # loads in space and time - MW
+param wind_totalmh{SCEN,TESTTIME}; # total wind power - MW
+
+# wind data
+set WIND;
+param wind_total{SCEN,TIME}; # total wind power - MW
+param bus_wind{WIND}; # wind bus
+param wind_share{WIND}; # wind share of total power MW/MW
+
+# variables
+var Pgen{SCEN,TESTTIME,GEN}; # generation levels - MW
+var Pload{SCEN,TESTTIME,LOAD}; # load levels - MW
+var yuc{TESTTIME,j in GEN} >= 0, <= 1; # ON/OFF Status generators
+var slackp{s in SCEN, t in TESTTIME}>=0; # slack - for modeling purposes only
+var slackm{s in SCEN, t in TESTTIME}>=0; # slack - for modeling purposes only
+var Pgen_initial{GEN}; # initial state for generators - MW
+
+# params for inference
+param fix_x;
+
+# power flow equations
+pfeq{s in SCEN, t in TESTTIME}:
+ +(sum{i in GEN} Pgen[s,t,i])
+ -(sum{i in LOAD} Pload[s,t,i])
+ + wind_totalmh[s,t]
+ = slackp[s,t]-slackm[s,t];
+
+# upper bound and lower bounds for generation flows [MW]
+Pgenequb{s in SCEN,t in TESTTIME,i in GEN}: Pgen[s,t,i] <= np_cap[i]*yuc[t,i];
+Pgeneqlb{s in SCEN,t in TESTTIME,i in GEN}: Pgen[s,t,i] >= 0;
+
+Pgenequbinit{i in GEN}: Pgen_initial[i] <= np_cap[i]*yuc[1,i];
+Pgeneqlbinit{i in GEN}: Pgen_initial[i] >= 0;
+
+# upper and lower bounds on ramps
+upramp{s in SCEN,t in HORIZON,i in GEN}: Pgen[s,t+1,i] - Pgen[s,t,i] <= +max_ur[i];
+loramp{s in SCEN,t in HORIZON,i in GEN}: Pgen[s,t,i] - Pgen[s,t+1,i] >= -max_dr[i];
+
+upramp0{s in SCEN,i in GEN}: Pgen[s,1,i] - Pgen_initial[i] <= +max_ur[i];
+loramp0{s in SCEN,i in GEN}: Pgen_initial[i] - Pgen[s,1,i] >= -max_dr[i];
+
+# time-dependent generation costs
+var tot_gen_cost{s in SCEN,t in TESTTIME} = 1e+0*sum{i in GEN} (gen_cost[i]*Pgen[s,t,i]);
+
+# time-dependent startup/shutdown costs
+var tot_start_cost{t in TESTTIME} = 1e+3*(sum{i in GEN} yuc[t,i]);
+
+# time-dependent slack costs
+var tot_slack_cost{s in SCEN,t in TESTTIME} = 1e+4*(slackp[s,t]+slackm[s,t]);
+
+# cost function
+minimize cost: sum{t in TESTTIME} tot_start_cost[t]
+ + (1/(card(SCEN)))*sum{s in SCEN,t in TESTTIME} tot_gen_cost[s,t]
+ + (1/(card(SCEN)))*sum{s in SCEN,t in TESTTIME} tot_slack_cost[s,t];
Property changes on: SwiftApps/swift-galaxy/swift/edrevised.mod
___________________________________________________________________
Added: svn:executable
+ *
Added: SwiftApps/swift-galaxy/swift/gftplist.swift
===================================================================
--- SwiftApps/swift-galaxy/swift/gftplist.swift (rev 0)
+++ SwiftApps/swift-galaxy/swift/gftplist.swift 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,18 @@
+type file;
+
+app (file _status, file _stdout, file _stderr) stage (string _src, string _dst){
+ stage _src _dst @_status stdout=@_stdout stderr=@_stderr;
+}
+
+string src="gsiftp://trestles-dm2.sdsc.edu:2811/home/ketan/storage/";
+string dst="gsiftp://gridftp.stampede.tacc.utexas.edu:2811/scratch/01739/ketan/dest/";
+
+string data[] = readData("datlist.txt");
+
+foreach d, i in data{
+ file status <single_file_mapper; file=@strcat("outdir/status.",i,".txt")>;
+ file out <single_file_mapper; file=@strcat("outdir/std.",i,".out")>;
+ file err <single_file_mapper; file=@strcat("outdir/std.",i,".err")>;
+ //trace (@strcat(src, d));
+ (status, out, err) = stage (@strcat(src, d), @strcat(dst, d));
+}
Added: SwiftApps/swift-galaxy/swift/lungsearch/Consortium_expr_full_pheno_no_affx.csv
===================================================================
--- SwiftApps/swift-galaxy/swift/lungsearch/Consortium_expr_full_pheno_no_affx.csv (rev 0)
+++ SwiftApps/swift-galaxy/swift/lungsearch/Consortium_expr_full_pheno_no_affx.csv 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,50 @@
+UniqueID,NCI_U133A_1L,NCI_U133A_2L,NCI_U133A_3L,NCI_U133A_4L,NCI_U133A_5L,NCI_U133A_6L,NCI_U133A_7L,NCI_U133A_8L,NCI_U133A_9L,NCI_U133A_10L,NCI_U133A_11L,NCI_U133A_12L,NCI_U133A_13L,NCI_U133A_14L,NCI_U133A_15L,NCI_U133A_16L,NCI_U133A_17L,NCI_U133A_18L,NCI_U133A_19L,NCI_U133A_20L,NCI_U133A_21L,NCI_U133A_22L,NCI_U133A_23L,NCI_U133A_24L,NCI_U133A_25L,NCI_U133A_26L,NCI_U133A_27L,NCI_U133A_28L,NCI_U133A_29L,NCI_U133A_30L,NCI_U133A_31L,NCI_U133A_32L,NCI_U133A_33L,NCI_U133A_34L,NCI_U133A_35L,NCI_U133A_37L_Rep,NCI_U133A_38L,NCI_U133A_39L,NCI_U133A_40L,NCI_U133A_41L,NCI_U133A_42L,NCI_U133A_43L,NCI_U133A_44L,NCI_U133A_45L,NCI_U133A_46L,NCI_U133A_47L,NCI_U133A_48L,NCI_U133A_49L,NCI_U133A_50L,NCI_U133A_51L,NCI_U133A_52L,NCI_U133A_53L,NCI_U133A_54L,NCI_U133A_55L,NCI_U133A_56L,NCI_U133A_57L,NCI_U133A_58L,NCI_U133A_59L,NCI_U133A_60L,NCI_U133A_61L,NCI_U133A_62L,NCI_U133A_63L,NCI_U133A_64L,NCI_U133A_65L,NCI_U133A_66L,NCI_U133A_67L,NCI_U133A_68L,NCI_U133A_69L,NCI_U133A_70L,NCI_U133A_71L,NCI_U
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,NCI_Lung_74_U133A,NCI_Lung_75_U133A,NCI_Lung_76_U133A,NCI_Lung_77_U133A,NCI_Lung_78_U133A,NCI_Lung_79_U133A,NCI_Lung_80_U133A,NCI_Lung_81_U133A,NCI_Lung_82_U133A,NCI_Lung_83_U133A,NCI_Lung_84_U133A,NCI_Lung_85_U133A,NCI_Lung_86_U133A,NCI_Lung_89_U133A,NCI_Lung_90_U133A,NCI_Lung_91_U133A,NCI_Lung_92_U133A,NCI_Lung_93_U133A,NCI_Lung_95_U133A,NCI_Lung_96_U133A,NCI_Lung_97_U133A,NCI_Lung_98_U133A,NCI_Lung_99_U133A,NCI_Lung_100_U133A,NCI_lung201_U133A,NCI_lung202_U133A,NCI_lung203_U133A,NCI_lung204_U133A,NCI_lung205_U133A,NCI_lung206_U133A,NCI_lung207_U133A,NCI_lung208 _U133A,NCI_lung209_U133A,NCI_lung210_U133A,NCI_lung212_U133A,NCI_lung213_U133A,NCI_lung214_U133A,NCI_lung215_U133A,NCI_lung218_U133A,NCI_lung219_U133A,NCI_lung220_U133A,NCI_lung221_U133A,NCI_lung222_U133A,NCI_lung224_U133A,NCI_lung227_U133A,NCI_lung228_U133A,NCI_lung229_U133A,NCI_lung230_U133A,NCI_lung231_U133A,NCI_lung234_U133A,NCI_lung235_U133A,NCI_lung236_U133A,NCI_lung237_U133A,NCI_lung238_U133A,NCI_lung239_U1
33A,NCI_lung240_U133A,NCI_lung246_U133A,NCI_lung247_U133A,NCI_lung249_U133A,NCI_lung258_U133A,NCI_lung259_U133A,NCI_lung263_U133A,NCI_lung267_U133A,NCI_lung268_U133A,NCI_lung269_U133A,NCI_lung270_U133A,NCI_lung271_U133A,NCI_lung272_U133A,NCI_lung273_U133A,NCI_lung274_U133A,Moff 0130D,Moff 0184A,Moff 0404A,Moff 0480I,Moff 0516E,Moff 0604H,Moff 0683H,Moff 0686G,Moff 0711B,Moff 0770K,Moff 0928E,Moff 0936G,Moff 1221F,Moff 1276H,Moff 1300F,Moff 1343G,Moff 1400H,Moff 1473F,Moff 1477G,Moff 1487F,Moff 1514K,Moff 1576F,Moff 1734M,Moff 1835I,Moff 1864H,Moff 1883G,Moff 1888E,Moff 1903E,Moff 2072G,Moff 2186B,Moff 2199G,Moff 2219F,Moff 2296D,Moff 2310K,Moff 2325E,Moff 2333J,Moff 2352G,Moff 2362A,Moff 2366C,Moff 2373H,Moff 2401B,Moff 2463A,Moff 2470G,Moff 2472B,Moff 2497D,Moff 2517G1,Moff 2550F,Moff 2595A,Moff 2603I,Moff 2629F,Moff 2634G,Moff 2658C,Moff 2663F,Moff 2690H,Moff 2886F,Moff 2955B,Moff 2958D,Moff 2996G,Moff 3003G,Moff 3009D,Moff 3053B,Moff 3191I,Moff 3274K,Moff 3298E,Moff 3401F
,Moff 3730B,Moff 4094F,Moff 4112G,Moff 4172B,Moff 4217B,Moff 3510G,Moff 0142C,Moff 0291A,Moff 0298B,Moff 0542F,Moff 1817G1,Moff 1940G,Moff 0170D,Moff 0978B,NCI_lung275_U133A,NCI_lung276_U133A,NCI_lung277_U133A,NCI_lung278_U133A,NCI_lung280_U133A,NCI_lung281_U133,NCI_lung282_U133,NCI_lung283_U133,NCI_lung285_U133,NCI_lung286_U133,NCI_lung288 _U133,NCI_lung289_U133,NCI_lung290_U133,NCI_lung291_U133,NCI_lung292_U133,NCI_lung293_U133,NCI_lung294_U133,NCI_lung295_U133,NCI_Lung296_U133,NCI_Lung297_U133,NCI_Lung298_U133,NCI_Lung299_U133,NCI_Lung300_U133,NCI_Lung304_U133,NCI_Lung305_U133,NCI_Lung306_U133,NCI_Lung307_U133,NCI_Lung309_U133,NCI_Lung310_U133,NCI_Lung311_U133,NCI_Lung312_U133,NCI_Lung313_U133,NCI_Lung314_U133A,NCI_Lung318_U133A,NCI_Lung319_U133A,NCI_Lung320_U133A,NCI_Lung321_U133A
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Added: SwiftApps/swift-galaxy/swift/lungsearch/HG-U133A_2.na33.annot.csv
===================================================================
--- SwiftApps/swift-galaxy/swift/lungsearch/HG-U133A_2.na33.annot.csv (rev 0)
+++ SwiftApps/swift-galaxy/swift/lungsearch/HG-U133A_2.na33.annot.csv 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,50 @@
+Probe Set ID,Transcript ID(Array Design),Target Description,Representative Public ID,Archival UniGene Cluster,UniGene ID,Alignments,Gene Title,Gene Symbol,Chromosomal Location,Unigene Cluster Type,Ensembl,Entrez Gene,SwissProt,EC,OMIM,RefSeq Protein ID,RefSeq Transcript ID,Gene Ontology Biological Process,Gene Ontology Cellular Component,Gene Ontology Molecular Function,Pathway,InterPro,Annotation Transcript Cluster,Transcript Assignments,Annotation Notes
+1007_s_at,U48705mRNA, U48705 /FEATURE=mRNA /DEFINITION=HSU48705 Human receptor tyrosine kinase DDR gene complete cds ,U48705,---,Hs.631988,chr6:30856165-30867931 (+) // 95.63 // p21.33,discoidin domain receptor tyrosine kinase 1 /// microRNA 4640,DDR1 /// MIR4640,chr6p21.3,full length,ENSG00000137332 /// ENSG00000204580 /// ENSG00000215522 /// ENSG00000230456 /// ENSG00000234078,100616237 /// 780,A2ABK8 /// A2ABK9 /// A2ABL0 /// A2ABL1 /// A2ABL2 /// A2ABM8 /// B7Z3A2 /// B8JJ50 /// B8JJ51 /// D6R9C4 /// D6RAJ3 /// D6RB35 /// D6RB82 /// D6RBU7 /// D6RGW5 /// E7EN94 /// E7ENJ2 /// E7EPH4 /// E7EPN2 /// E7EQ23 /// E7EQ30 /// E7ERI6 /// E7ERN0 /// E7ES06 /// E7ESR9 /// E7ETI3 /// E7ETX3 /// E7EUD5 /// E7EUP7 /// E7EVT1 /// E7EVW6 /// E7EX99 /// E7EXB0 /// F5H786 /// F8VYL2 /// H0Y4U0 /// H0Y717 /// H0Y9F4 /// H0YAH6 /// Q08345 /// Q6ZNR9 /// Q96T61 /// Q96T62,EC:2.7.10.1,600408,NP_001189450 /// NP_001189451 /// NP_001189452 /// NP_001945 /// NP_054699 /// NP_054700,NM_00120252
1 /// NM_001202522 /// NM_001202523 /// NM_001954 /// NM_013993 /// NM_013994 /// NR_039783,0001558 // regulation of cell growth // inferred from electronic annotation /// 0001952 // regulation of cell-matrix adhesion // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007566 // embryo implantation // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010715 // regulation of extracellular matrix disassembly // inferred from mutant phenotype /// 001
0715 // regulation of extracellular matrix disassembly // inferred from electronic annotation /// 0014909 // smooth muscle cell migration // inferred from mutant phenotype /// 0014909 // smooth muscle cell migration // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0038063 // collagen-activated tyrosine kinase receptor signaling pathway // inferred from direct assay /// 0038063 // collagen-activated tyrosine kinase receptor signaling pathway // inferred from mutant phenotype /// 0038063 // collagen-activated tyrosine kinase receptor signaling pathway // inferred from electronic annotation /// 0038083 // peptidyl-tyrosine autophosphorylation // inferred from direct assay /// 0043583 // ear development // inferred from electronic annotation /// 0043588 // s
kin development // inferred from electronic annotation /// 0044319 // wound healing spreading of cells // inferred from mutant phenotype /// 0044319 // wound healing spreading of cells // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0060444 // branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060749 // mammary gland alveolus development // inferred from electronic annotation /// 0061302 // smooth muscle cell-matrix adhesion // inferred from mutant phenotype /// 0061302 // smooth muscle cell-matrix adhesion // inferred from electronic annotation,0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inf
erred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation,0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0005518 // collagen binding // inferred from mutant phenotype /// 0005518 // collagen binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase a
ctivity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity transferring phosphorus-containing groups // inferred from electronic annotation /// 0038062 // protein tyrosine kinase collagen receptor activity // inferred from direct assay,---,IPR000421 // Coagulation factor 5/8 C-terminal type domain // 1.4E-24 /// IPR000421 // Coagulation factor 5/8 C-terminal type domain // 1.3E-24 /// IPR000421 // Coagulation factor 5/8 C-terminal type domain // 3.5E-26 /// IPR000719 // Protein kinase catalytic domain // 7.2E-45 /// IPR000719 // Protein kinase catalytic domain // 6.6E-45 /// IPR000719 // Protein kinase catalytic domain // 9.3E-44 /// IPR000719 // Protein kinase catalytic domain // 6.2E-45 /// IPR001245 // Serine-threonine/tyrosine-protein kinase catalytic domain // 6.9E-88 /// IPR001245 // Serine-threonine/tyrosine-protein kinase catalytic domain // 6.4E-88 /// IPR001245 /
/ Serine-threonine/tyrosine-protein kinase catalytic domain // 3.6E-85 /// IPR001245 // Serine-threonine/tyrosine-protein kinase catalytic domain // 2.4E-86,BC008716(16) BC013400(16) BC070070(16) L11315(16) L20817(16) L57508(16) Z29093(16) ENST00000324771(16) ENST00000454612(16) ENST00000376569(16) ENST00000376568(16) ENST00000376567(16) ENST00000376575(16) ENST00000376570(16) ENST00000452441(16) ENST00000446312(16) ENST00000412329(16) ENST00000449518(16) ENST00000427053(16) ENST00000462241(16) ENST00000415092(16) ENST00000453510(16) ENST00000452093(16) ENST00000548133(16) ENST00000548962(16) ENST00000430933(16) ENST00000429699(16) ENST00000421229(16) ENST00000487780(16) ENST00000454774(16) ENST00000419412(16) ENST00000446697(16) ENST00000552068(16) ENST00000550384(16) ENST00000400492(16) ENST00000400491(16) ENST00000400489(16) ENST00000490712(16) ENST00000400488(16) ENST00000400486(16) ENST00000450117(16) ENST00000550395(16) ENST00000549026(16) ENST00000383377(16) ENST00000
400414(16) ENST00000259875(16) ENST00000468225(16) ENST00000400411(16) ENST00000400410(16) ENST00000416487(16) ENST00000553015(16) ENST00000552721(16) NM_013994(16) NM_001202521(16) NM_001202522(16) NM_013993(16) NM_001954(16) NM_001202523(16),BC008716 // Homo sapiens discoidin domain receptor tyrosine kinase 1 mRNA (cDNA clone MGC:8681 IMAGE:2964574) complete cds. // gb // 16 // --- /// BC013400 // Homo sapiens discoidin domain receptor tyrosine kinase 1 mRNA (cDNA clone MGC:3909 IMAGE:2964574) complete cds. // gb // 16 // --- /// BC070070 // Homo sapiens discoidin domain receptor tyrosine kinase 1 mRNA (cDNA clone MGC:87336 IMAGE:5262509) complete cds. // gb // 16 // --- /// ENST00000259875 // cdna:known chromosome:GRCh37:HSCHR6_MHC_COX:30841734:30857829:1 gene:ENSG00000137332 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000324771 // cdna:known chromosome:GRCh37:6:30848626:30867931:1 gene:ENSG00000204580 gene_biotype
:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000376567 // cdna:known chromosome:GRCh37:6:30856166:30867933:1 gene:ENSG00000204580 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000376568 // cdna:known chromosome:GRCh37:6:30852235:30867930:1 gene:ENSG00000204580 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000376569 // cdna:known chromosome:GRCh37:6:30851846:30867933:1 gene:ENSG00000204580 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000376570 // cdna:known chromosome:GRCh37:6:30851861:30867929:1 gene:ENSG00000204580 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000376575 // cdna:known chromosome:GRCh37:6:30851861:30867929:1 gene:ENSG00000204580 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00
000383377 // cdna:known chromosome:GRCh37:HSCHR6_MHC_COX:30838699:30857829:1 gene:ENSG00000137332 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000400410 // cdna:known chromosome:GRCh37:HSCHR6_MHC_COX:30846060:30857829:1 gene:ENSG00000137332 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000400411 // cdna:known chromosome:GRCh37:HSCHR6_MHC_COX:30842237:30857829:1 gene:ENSG00000137332 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000400414 // cdna:known chromosome:GRCh37:HSCHR6_MHC_COX:30841450:30857829:1 gene:ENSG00000137332 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000400486 // cdna:known chromosome:GRCh37:HSCHR6_MHC_QBL:30845756:30857525:1 gene:ENSG00000215522 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000400488 // cdna:k
nown chromosome:GRCh37:HSCHR6_MHC_QBL:30841933:30857525:1 gene:ENSG00000215522 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000400489 // cdna:known chromosome:GRCh37:HSCHR6_MHC_QBL:30841430:30857525:1 gene:ENSG00000215522 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000400491 // cdna:known chromosome:GRCh37:HSCHR6_MHC_QBL:30841146:30857525:1 gene:ENSG00000215522 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000400492 // cdna:known chromosome:GRCh37:HSCHR6_MHC_QBL:30838395:30857525:1 gene:ENSG00000215522 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000412329 // cdna:known chromosome:GRCh37:HSCHR6_MHC_DBB:30839511:30858654:1 gene:ENSG00000230456 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000415092 // cdna:known chromosome:GRC
h37:HSCHR6_MHC_DBB:30843048:30858654:1 gene:ENSG00000230456 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000416487 // cdna:known chromosome:GRCh37:HSCHR6_MHC_COX:30854294:30857829:1 gene:ENSG00000137332 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000419412 // cdna:known chromosome:GRCh37:HSCHR6_MHC_MANN:30900854:30912617:1 gene:ENSG00000234078 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000421229 // cdna:known chromosome:GRCh37:HSCHR6_MHC_MANN:30896528:30912617:1 gene:ENSG00000234078 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000427053 // cdna:known chromosome:GRCh37:HSCHR6_MHC_DBB:30842545:30858654:1 gene:ENSG00000230456 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000429699 // cdna:known chromosome:GRCh37:HSCHR6_MHC_MA
NN:30896244:30912617:1 gene:ENSG00000234078 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000430933 // cdna:known chromosome:GRCh37:HSCHR6_MHC_MANN:30893493:30912617:1 gene:ENSG00000234078 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000446312 // cdna:known chromosome:GRCh37:6:30851861:30867929:1 gene:ENSG00000204580 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000446697 // cdna:known chromosome:GRCh37:HSCHR6_MHC_MANN:30909082:30912617:1 gene:ENSG00000234078 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000449518 // cdna:known chromosome:GRCh37:HSCHR6_MHC_DBB:30842261:30858654:1 gene:ENSG00000230456 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000450117 // cdna:known chromosome:GRCh37:HSCHR6_MHC_QBL:30853990:30857525:1 gene:EN
SG00000215522 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000452093 // cdna:known chromosome:GRCh37:HSCHR6_MHC_DBB:30855119:30858654:1 gene:ENSG00000230456 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000452441 // cdna:known chromosome:GRCh37:6:30852327:30867929:1 gene:ENSG00000204580 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000453510 // cdna:known chromosome:GRCh37:HSCHR6_MHC_DBB:30846871:30858654:1 gene:ENSG00000230456 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000454612 // cdna:known chromosome:GRCh37:6:30850732:30867933:1 gene:ENSG00000204580 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000454774 // cdna:known chromosome:GRCh37:HSCHR6_MHC_MANN:30897031:30912617:1 gene:ENSG00000234078 gene_biotype:protein_coding tr
anscript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000462241 // cdna:known chromosome:GRCh37:HSCHR6_MHC_DBB:30843038:30858654:1 gene:ENSG00000230456 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 16 // --- /// ENST00000468225 // cdna:known chromosome:GRCh37:HSCHR6_MHC_COX:30842227:30857829:1 gene:ENSG00000137332 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 16 // --- /// ENST00000487780 // cdna:known chromosome:GRCh37:HSCHR6_MHC_MANN:30897021:30912617:1 gene:ENSG00000234078 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 16 // --- /// ENST00000490712 // cdna:known chromosome:GRCh37:HSCHR6_MHC_QBL:30841923:30857525:1 gene:ENSG00000215522 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 16 // --- /// ENST00000548133 // cdna:known chromosome:GRCh37:HSCHR6_MHC_DBB:30842566:30858650:1 gene:ENSG00000230456 gene_biotype:protein_cod
ing transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000548962 // cdna:known chromosome:GRCh37:HSCHR6_MHC_DBB:30842566:30858650:1 gene:ENSG00000230456 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000549026 // cdna:known chromosome:GRCh37:HSCHR6_MHC_QBL:30841451:30857521:1 gene:ENSG00000215522 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000550384 // cdna:known chromosome:GRCh37:HSCHR6_MHC_MANN:30896549:30912613:1 gene:ENSG00000234078 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000550395 // cdna:known chromosome:GRCh37:HSCHR6_MHC_QBL:30841451:30857521:1 gene:ENSG00000215522 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000552068 // cdna:known chromosome:GRCh37:HSCHR6_MHC_MANN:30896549:30912613:1 gene:ENSG00000234078 gene_biotype:protein_coding transcript_bi
otype:protein_coding // ensembl // 16 // --- /// ENST00000552721 // cdna:known chromosome:GRCh37:HSCHR6_MHC_COX:30841755:30857825:1 gene:ENSG00000137332 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000553015 // cdna:known chromosome:GRCh37:HSCHR6_MHC_COX:30841755:30857825:1 gene:ENSG00000137332 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// L11315 // Homo sapiens receptor tyrosine kinase mRNA complete cds. // gb // 16 // --- /// L20817 // Homo sapiens tyrosine protein kinase (CAK) gene complete cds. // gb // 16 // --- /// L57508 // Homo sapiens Cak receptor kinase mRNA complete cds. // gb // 16 // --- /// NM_001202521 // Homo sapiens discoidin domain receptor tyrosine kinase 1 (DDR1) transcript variant 4 mRNA. // refseq // 16 // --- /// NM_001202522 // Homo sapiens discoidin domain receptor tyrosine kinase 1 (DDR1) transcript variant 5 mRNA. // refseq // 16 // --- /// NM_0012
02523 // Homo sapiens discoidin domain receptor tyrosine kinase 1 (DDR1) transcript variant 6 mRNA. // refseq // 16 // --- /// NM_001954 // Homo sapiens discoidin domain receptor tyrosine kinase 1 (DDR1) transcript variant 1 mRNA. // refseq // 16 // --- /// NM_013993 // Homo sapiens discoidin domain receptor tyrosine kinase 1 (DDR1) transcript variant 2 mRNA. // refseq // 16 // --- /// NM_013994 // Homo sapiens discoidin domain receptor tyrosine kinase 1 (DDR1) transcript variant 3 mRNA. // refseq // 16 // --- /// Z29093 // H.sapiens EDDR1 gene for receptor tyrosine kinase. // gb // 16 // ---,AK291621 // gb // 8 // Cross Hyb Matching Probes /// ENST00000418800 // ensembl // 8 // Cross Hyb Matching Probes /// ENST00000361741 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000451954 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000548853 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000550666 // ensembl // 2 // Cross Hyb Matching Probes /// ENS
T00000547608 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000548693 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000549968 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000552434 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000550341 // ensembl // 2 // Cross Hyb Matching Probes
+1053_at,M87338, M87338 /FEATURE= /DEFINITION=HUMA1SBU Human replication factor C 40-kDa subunit (A1) mRNA complete cds ,M87338,---,Hs.647062,chr7:73646002-73668732 (-) // 70.86 // q11.23,replication factor C (activator 1) 2 40kDa,RFC2,chr7q11.23,full length,ENSG00000049541 /// ENSG00000261911,5982,B5BUD2 /// F8WC37 /// F8WDC9 /// H0YEY3 /// H7C596 /// H7C5A0 /// H7C5G4 /// H7C5P1 /// H7C5P4 /// H7C5Q7 /// H7C5S7 /// P35250 /// Q75MT5,---,600404,NP_002905 /// NP_852136,NM_002914 /// NM_181471,0000075 // cell cycle checkpoint // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 00
06271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair DNA gap filling // traceable author statement /// 0015979 // photosynthesis // inferred from electronic annotation /// 0015995 // chlorophyll biosynthetic process // inferred from electronic annotation /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement,0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005663 // DNA replication factor C complex // inferred from direct assay,0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0
005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0016851 // magnesium chelatase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation,DNA_replication_Reactome // GenMAPP,IPR000523 // Magnesium chelatase ChlI subunit // 2.3E-8 /// IPR000606 // Helicase domain viral-like // 2.3E-8 /// IPR003959 // ATPase AAA-type core // 1.8E-16 /// IPR013748 // Replication factor C C-terminal domain // 8.0E-31 /// IPR013748 // Replication factor C C-terminal domain // 1.2E-30 /// IPR013748 // Replication factor C C-terminal domain // 1.9E-21,AB451243(9) BC002813(13) BT007058(9) ENST00000055077(13) ENST00000352131(13) ENST00000485545(13) ENST00000493156(13) ENST00000497430(9) ENST00000570503(13) ENST00000573234(13) ENST00000576165(9) ENST00000576280(13) ENST00000576
908(13) NM_002914(13) NM_181471(13),AB451243 // Homo sapiens RFC2 mRNA for replication factor C 2 isoform 1 complete cds clone: FLJ08043AAAN. // gb // 9 // --- /// BC002813 // Homo sapiens replication factor C (activator 1) 2 40kDa mRNA (cDNA clone MGC:3665 IMAGE:3637774) complete cds. // gb // 13 // --- /// BT007058 // Homo sapiens replication factor C (activator 1) 2 40kDa mRNA complete cds. // gb // 9 // --- /// ENST00000055077 // cdna:known chromosome:GRCh37:7:73645867:73668774:-1 gene:ENSG00000049541 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 13 // --- /// ENST00000352131 // cdna:known chromosome:GRCh37:7:73645829:73668719:-1 gene:ENSG00000049541 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 13 // --- /// ENST00000485545 // cdna:known chromosome:GRCh37:7:73646104:73654337:-1 gene:ENSG00000049541 gene_biotype:protein_coding transcript_biotype:nonsense_mediated_decay // ensembl // 13 // --- /// ENST0000
0493156 // cdna:known chromosome:GRCh37:7:73646004:73668719:-1 gene:ENSG00000049541 gene_biotype:protein_coding transcript_biotype:nonsense_mediated_decay // ensembl // 13 // --- /// ENST00000497430 // cdna:known chromosome:GRCh37:7:73646434:73657576:-1 gene:ENSG00000049541 gene_biotype:protein_coding transcript_biotype:nonsense_mediated_decay // ensembl // 9 // --- /// ENST00000570503 // cdna:known chromosome:GRCh37:HG1257_PATCH:73696098:73718813:-1 gene:ENSG00000261911 gene_biotype:protein_coding transcript_biotype:nonsense_mediated_decay // ensembl // 13 // --- /// ENST00000573234 // cdna:known chromosome:GRCh37:HG1257_PATCH:73695923:73718813:-1 gene:ENSG00000261911 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 13 // --- /// ENST00000576165 // cdna:known chromosome:GRCh37:HG1257_PATCH:73696528:73707670:-1 gene:ENSG00000261911 gene_biotype:protein_coding transcript_biotype:nonsense_mediated_decay // ensembl // 9 // --- /// ENST00000576280 // c
dna:known chromosome:GRCh37:HG1257_PATCH:73696198:73704431:-1 gene:ENSG00000261911 gene_biotype:protein_coding transcript_biotype:nonsense_mediated_decay // ensembl // 13 // --- /// ENST00000576908 // cdna:known chromosome:GRCh37:HG1257_PATCH:73695961:73718868:-1 gene:ENSG00000261911 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 13 // --- /// GENSCAN00000019182 // cdna:genscan chromosome:GRCh37:7:73646419:73668713:-1 transcript_biotype:protein_coding // ensembl // 9 // --- /// GENSCAN00000049388 // cdna:genscan chromosome:GRCh37:HG1257_PATCH:73696513:73718807:-1 transcript_biotype:protein_coding // ensembl // 9 // --- /// M87338 // Human replication factor C 40-kDa subunit (A1) mRNA complete cds. // gb // 16 // --- /// NM_002914 // Homo sapiens replication factor C (activator 1) 2 40kDa (RFC2) transcript variant 2 mRNA. // refseq // 13 // --- /// NM_181471 // Homo sapiens replication factor C (activator 1) 2 40kDa (RFC2) transcript varian
t 1 mRNA. // refseq // 13 // ---,ENST00000470266 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000494019 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000480432 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000570552 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000572571 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000576356 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000415505 // ensembl // 1 // Cross Hyb Matching Probes
+117_at,X51757cds,X51757 /FEATURE=cds /DEFINITION=HSP70B Human heat-shock protein HSP70B' gene,X51757,---,Hs.654614,chr1:161494448-161496380 (+) // 99.59 // q23.3 /// chr1:161576080-161578007 (+) // 98.03 // q23.3,heat shock 70kDa protein 6 (HSP70B'),HSPA6,chr1q23,full length,ENSG00000173110 /// ENSG00000225217,3310,B2R6X5 /// B3KSM6 /// B4DHP5 /// P17066 /// Q53FC7,---,140555,NP_002146,NM_002155,0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement,0008180 // signalosome // inferred from direct assay,0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation,---,IPR004753 // Cell shape determining protein MreB/Mrl // 2.9E-19 /// IPR004753 // Cell shape determining protein MreB/Mrl // 1.8E-19 /// IPR013126 // Heat shock protein 70 family // 3.7E-276 /// IPR013126 // Heat shock protein 70 family // 2.0E-256,AK29521
2(16) BC035665(16) ENST00000309758(16) ENST00000545155(16) NM_002155(16),AK295212 // Homo sapiens cDNA FLJ51847 complete cds highly similar to Heat shock 70 kDa protein 6. // gb // 16 // --- /// BC035665 // Homo sapiens heat shock 70kDa protein 6 (HSP70B') mRNA (cDNA clone MGC:46216 IMAGE:5723718) complete cds. // gb // 16 // --- /// ENST00000309758 // cdna:known chromosome:GRCh37:1:161494036:161496681:1 gene:ENSG00000173110 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000445535 // cdna:pseudogene chromosome:GRCh37:1:161576081:161578007:1 gene:ENSG00000225217 gene_biotype:pseudogene transcript_biotype:unprocessed_pseudogene // ensembl // 9 // --- /// ENST00000545155 // cdna:known chromosome:GRCh37:1:161494335:161496582:1 gene:ENSG00000173110 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// GENSCAN00000030321 // cdna:genscan chromosome:GRCh37:1:161399952:161496380:1 transcript_bioty
pe:protein_coding // ensembl // 16 // --- /// GENSCAN00000031598 // cdna:genscan chromosome:GRCh37:1:161576081:161578007:1 transcript_biotype:protein_coding // ensembl // 9 // --- /// NM_002155 // Homo sapiens heat shock 70kDa protein 6 (HSP70B') (HSPA6) mRNA. // refseq // 16 // --- /// NR_024151 // Homo sapiens heat shock 70kDa protein 7 (HSP70B) (HSPA7) non-coding RNA. // refseq // 9 // ---,---
+121_at,X69699,X69699 /FEATURE= /DEFINITION=HSPAX8A H.sapiens Pax8 mRNA,X69699,---,Hs.469728,chr2:113974939-114036488 (-) // 98.3 // q13,paired box 8,PAX8,chr2q13,full length,ENSG00000125618,7849,G3V3F3 /// G3V463 /// H0YJD1 /// H0YJZ5 /// Q06710,---,167415 /// 218700,NP_003457 /// NP_039246 /// NP_039247 /// NP_054698,NM_003466 /// NM_013951 /// NM_013952 /// NM_013953 /// NM_013992,0001655 // urogenital system development // inferred from sequence or structural similarity /// 0001655 // urogenital system development // inferred from electronic annotation /// 0001656 // metanephros development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from expression pattern /// 0001822 // kidney development // inferred from expression pattern /// 0001823 // mesonephros development // inferred from sequence or structural similarity /// 0001823 // mesonephros development // inferred from electronic annotation /// 0003337
// mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from expression pattern /// 0006351 // transcription DNA-dependent // inferred from direct assay /// 0006351 // transcription DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription DNA-dependent // traceable author statement /// 0006355 // regulation of transcription DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from expression pattern /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030878 // thyroid gland development // inferred from expression pattern /// 0030878 // thyroid gland devel
opment // inferred from mutant phenotype /// 0030878 // thyroid gland development // inferred from electronic annotation /// 0039003 // pronephric field specification // inferred from sequence or structural similarity /// 0039003 // pronephric field specification // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from sequence or structural similarity /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription DNA-dependent // inferred from electronic annotation /// 0045944 /
/ positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048793 // pronephros development // inferred from sequence or structural similarity /// 0048793 // pronephros development // inferred from electronic annotation /// 0071371 // cellular response to gonadotropin stimulus // inferred from direct assay /// 0071599 // otic vesicle development // inferred from expression pattern /// 0072050 // S-shaped body morphogenesis // inferred from electronic annotation /// 0072073 // kidney epithelium development // inferred from electronic annotation /// 0072108 // positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from sequence or structural similarity /// 0072108 // positive regulation of mesenchymal to epithelial transition involved in metanephros morpho
genesis // inferred from electronic annotation /// 0072164 // mesonephric tubule development // inferred from electronic annotation /// 0072205 // metanephric collecting duct development // inferred from electronic annotation /// 0072207 // metanephric epithelium development // inferred from expression pattern /// 0072221 // metanephric distal convoluted tubule development // inferred from sequence or structural similarity /// 0072221 // metanephric distal convoluted tubule development // inferred from electronic annotation /// 0072278 // metanephric comma-shaped body morphogenesis // inferred from expression pattern /// 0072284 // metanephric S-shaped body morphogenesis // inferred from expression pattern /// 0072289 // metanephric nephron tubule formation // inferred from sequence or structural similarity /// 0072289 // metanephric nephron tubule formation // inferred from electronic annotation /// 0072305 // negative regulation of mesenchymal stem cell apoptotic process i
nvolved in metanephric nephron morphogenesis // inferred from sequence or structural similarity /// 0072305 // negative regulation of mesenchymal stem cell apoptotic process involved in metanephric nephron morphogenesis // inferred from electronic annotation /// 0072307 // regulation of metanephric nephron tubule epithelial cell differentiation // inferred from sequence or structural similarity /// 0072307 // regulation of metanephric nephron tubule epithelial cell differentiation // inferred from electronic annotation /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 1900212 // negative regulation of mesenchymal cell apoptotic process involved in metanephros development // inferred from sequence or structural similarity /// 1900215 // negative regulation of ap
optotic process involved in metanephric collecting duct development // inferred from sequence or structural similarity /// 1900218 // negative regulation of apoptotic process involved in metanephric nephron tubule development // inferred from sequence or structural similarity /// 2000594 // positive regulation of metanephric DCT cell differentiation // inferred from sequence or structural similarity /// 2000594 // positive regulation of metanephric DCT cell differentiation // inferred from electronic annotation /// 2000611 // positive regulation of thyroid hormone generation // inferred from mutant phenotype /// 2000611 // positive regulation of thyroid hormone generation // inferred from electronic annotation /// 2000612 // regulation of thyroid-stimulating hormone secretion // inferred from mutant phenotype,0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from sequence or s
tructural similarity /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay,0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from mutant phenotype /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004996 // thyroid-stimulating hormone receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // tr
anscription regulatory region DNA binding // inferred from electronic annotation,---,IPR001523 // Paired domain // 1.4E-75 /// IPR001523 // Paired domain // 1.1E-75 /// IPR001523 // Paired domain // 2.2E-75 /// IPR001523 // Paired domain // 5.5E-75 /// IPR022130 // Paired-box protein 2 C-terminal // 7.5E-53,BC001060(15) ENST00000263335(14) ENST00000348715(14) ENST00000397647(14) ENST00000429538(14) NM_003466(14) NM_013952(14) NM_013953(14) NM_013992(14),AK096795 // Homo sapiens cDNA FLJ39476 fis clone PROST2013260. // gb // 14 // --- /// BC001060 // Homo sapiens paired box 8 mRNA (cDNA clone MGC:2141 IMAGE:2963877) complete cds. // gb // 15 // --- /// ENST00000263335 // cdna:known chromosome:GRCh37:2:113973574:114036488:-1 gene:ENSG00000125618 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 14 // --- /// ENST00000348715 // cdna:known chromosome:GRCh37:2:113973574:114036488:-1 gene:ENSG00000125618 gene_biotype:protein_coding transcript_biotype:p
rotein_coding // ensembl // 14 // --- /// ENST00000397647 // cdna:known chromosome:GRCh37:2:113973574:114036488:-1 gene:ENSG00000125618 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 14 // --- /// ENST00000429538 // cdna:known chromosome:GRCh37:2:113973574:114036527:-1 gene:ENSG00000125618 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 14 // --- /// NM_003466 // Homo sapiens paired box 8 (PAX8) transcript variant PAX8A mRNA. // refseq // 14 // --- /// NM_013952 // Homo sapiens paired box 8 (PAX8) transcript variant PAX8C mRNA. // refseq // 14 // --- /// NM_013953 // Homo sapiens paired box 8 (PAX8) transcript variant PAX8D mRNA. // refseq // 14 // --- /// NM_013992 // Homo sapiens paired box 8 (PAX8) transcript variant PAX8E mRNA. // refseq // 14 // ---,AK124991 // gb // 3 // Cross Hyb Matching Probes /// GENSCAN00000041931 // ensembl // 1 // Cross Hyb Matching Probes
+1255_g_at,L36861expanded_cds, L36861 /FEATURE=expanded_cds /DEFINITION=HUMGCAPB Homo sapiens guanylate cyclase activating protein (GCAP) gene exons 1-4 complete cds ,L36861,---,Hs.92858,chr6:42140941-42147792 (+) // 90.58 // p21.1,guanylate cyclase activator 1A (retina),GUCA1A,chr6p21.1,full length,ENSG00000048545,2978,A6NIT3 /// B2R9P6 /// P43080,---,600364 /// 602093,NP_000400,NM_000409,0007165 // signal transduction // non-traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0050896 // response to stimulus // inferred from electronic annotation,0016020 // membrane // inferred from electronic annotation,0005509 // calcium ion binding // inferred from electronic annotation /// 0008048 // calcium sensitive guanylate cyclase activator activity // traceable author statement,---,IPR018248 // EF-hand // 1.0E-10 /// IPR018248 // EF-hand // 3.0E-10 /// IPR018248 // EF-
hand // 1.1E-10 /// IPR018248 // EF-hand // 6.1E-10 /// IPR019577 // SPARC/Testican calcium-binding domain // 1.1E-8,AK125780(16) BC031663(16) ENST00000053469(16) ENST00000372958(16) ENST00000372965(16) ENST00000394237(16) NM_000409(16),AK125780 // Homo sapiens cDNA FLJ43792 fis clone TESTI2053621 highly similar to Guanylyl cyclase-activating protein 1. // gb // 16 // --- /// BC031663 // Homo sapiens guanylate cyclase activator 1A (retina) mRNA (cDNA clone MGC:34591 IMAGE:5172128) complete cds. // gb // 16 // --- /// ENST00000053469 // cdna:known chromosome:GRCh37:6:42123174:42147794:1 gene:ENSG00000048545 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000372958 // cdna:known chromosome:GRCh37:6:42141029:42147787:1 gene:ENSG00000048545 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000372965 // cdna:known chromosome:GRCh37:6:42123144:42147790:1 gene:ENSG00000048545 gene_bio
type:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000394237 // cdna:known chromosome:GRCh37:6:42123184:42147792:1 gene:ENSG00000048545 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// NM_000409 // Homo sapiens guanylate cyclase activator 1A (retina) (GUCA1A) mRNA. // refseq // 16 // ---,---
+1294_at,L13852, L13852 /FEATURE= /DEFINITION=HUME1URP Homo sapiens ubiquitin-activating enzyme E1 related protein mRNA complete cds ,L13852,---,Hs.16695,chr3:49842639-49851423 (-) // 95.09 // p21.31,ubiquitin-like modifier activating enzyme 7,UBA7,chr3p21,full length,ENSG00000182179,7318,P41226,---,191325,NP_003326,NM_003335,0006464 // cellular protein modification process // inferred from direct assay /// 0006464 // cellular protein modification process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019941 // modification-dependent protein catabolic process // inferred from electronic annotation /// 0032020 // ISG15-protein conjugation // inferred from direct assay /// 0032020 // ISG15-protein conjugation // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceabl
e author statement /// 0045087 // innate immune response // traceable author statement,0005829 // cytosol // traceable author statement,0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008641 // small protein activating enzyme activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019782 // ISG15 activating enzyme activity // inferred from direct assay /// 0019782 // ISG15 activating enzyme activity // inferred from electronic annotation,Proteasome_Degradation // GenMAPP,IPR000127 // Ubiquitin-activating enzyme repeat // 7.0E-10 /// IPR000127 // Ubiquitin-activating enzyme repeat // 1.1E-28 /// IPR000594 // UBA/THIF-type NAD/FAD binding fold // 3.9E-22 /// IPR000594 // UBA/THIF-type NAD/FAD binding fold // 4.6E-37 /// IPR018965 // Ubiquitin-activa
ting enzyme e1 C-terminal // 1.9E-30 /// IPR019572 // Ubiquitin-activating enzyme // 1.2E-18,BC006378(16) BT007026(12) ENST00000333486(16) ENST00000497908(11) L13852(16) NM_003335(16),BC006378 // Homo sapiens ubiquitin-like modifier activating enzyme 7 mRNA (cDNA clone MGC:12713 IMAGE:4299266) complete cds. // gb // 16 // --- /// BT007026 // Homo sapiens ubiquitin-activating enzyme E1-like mRNA complete cds. // gb // 12 // --- /// ENST00000333486 // cdna:known chromosome:GRCh37:3:49842640:49851379:-1 gene:ENSG00000182179 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000497908 // cdna:known chromosome:GRCh37:3:49842657:49843723:-1 gene:ENSG00000182179 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 11 // --- /// GENSCAN00000020140 // cdna:genscan chromosome:GRCh37:3:49843326:49893886:-1 transcript_biotype:protein_coding // ensembl // 9 // --- /// L13852 // Homo sapiens ubiquitin-activating enzy
me E1 related protein mRNA complete cds. // gb // 16 // --- /// NM_003335 // Homo sapiens ubiquitin-like modifier activating enzyme 7 (UBA7) mRNA. // refseq // 16 // ---,---
+1316_at,X55005mRNA, X55005 /FEATURE=mRNA /DEFINITION=HSCERBAR Homo sapiens mRNA for thyroid hormone receptor alpha 1 THRA1 (c-erbA-1 gene) ,X55005,---,Hs.724,chr17:38219155-38246289 (+) // 97.54 // q21.1,thyroid hormone receptor alpha,THRA,chr17q11.2,full length,ENSG00000126351,7067,A8K206 /// B6ZGR6 /// P10827 /// P20393 /// Q59FW3 /// Q6FH41 /// Q6LDR0,---,190120 /// 614450,NP_001177847 /// NP_001177848 /// NP_003241 /// NP_955366,NM_001190918 /// NM_001190919 /// NM_003250 /// NM_199334,0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay //
/ 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0010871 // negative regulation of receptor biosynthetic process // inferred from mutant phenotype /// 0017055 // negative regulation of RNA polymerase II transcriptional preinitiation complex assembly // inferred from direct assay /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0034144 // negative regulation of toll-like receptor 4 signaling pathway // inferred from mutant phenotype /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // traceable author statement /// 0045892 // negative regulation of transcription
DNA-dependent // inferred from direct assay /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype /// 2000143 // negative regulation of transcription initiation DNA-dependent // inferred from direct assay /// 2000189 // positive regulation of cholesterol homeostasis // inferred from direct assay,0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay,0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone recep
tor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0004887 // thyroid hormone receptor activity // inferred from direct assay /// 0004887 // thyroid hormone receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017025 // TBP-class protein binding // inferred from direct assay /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0043565 // sequen
ce-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070324 // thyroid hormone binding // inferred from direct assay /// 0070324 // thyroid hormone binding // inferred from physical interaction,Nuclear_Receptors // GenMAPP,IPR000536 // Nuclear hormone receptor ligand-binding core // 2.7E-37 /// IPR001628 // Zinc finger nuclear hormone receptor-type // 2.1E-33,AB209346(13) ENST00000450525(13) NM_199334(12),AB209346 // Homo sapiens mRNA for thyroid hormone receptor alpha isoform 1 variant protein. // gb // 13 // --- /// ENST00000450525 // cdna:known chromosome:GRCh37:17:38219152:38248880:1 gene:ENSG00000126351 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 13 // --- /// NM_199334 // Homo sapiens thyroid hormone receptor alpha (THRA) transcript variant 1 mRNA. // refseq
// 12 // ---,BC008851 // gb // 8 // Cross Hyb Matching Probes
+1320_at,X79510cds,X79510 /FEATURE=cds /DEFINITION=HSPTPD1 H.sapiens mRNA for protein-tyrosine-phosphatase D1,X79510,---,Hs.437040,chr14:88934480-89016761 (-) // 99.89 // q31.3,protein tyrosine phosphatase non-receptor type 21,PTPN21,chr14q31.3,full length,ENSG00000070778,11099,G3V1Q9 /// G3V3S6 /// H0YJ59 /// Q16825,EC:3.1.3.48,603271,NP_008970,NM_007039,0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation,0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement,0004721 // phosphoprotein phosphatase activity // inferr
ed from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation,---,IPR000242 // Protein-tyrosine phosphatase receptor/non-receptor type // 1.2E-77 /// IPR000242 // Protein-tyrosine phosphatase receptor/non-receptor type // 4.0E-17 /// IPR018979 // FERM N-terminal // 7.6E-21 /// IPR018979 // FERM N-terminal // 1.4E-8 /// IPR018980 // FERM C-terminal PH-like domain // 4.4E-20 /// IPR019748 // FERM central domain // 3.1E-25,BC143846(16) BC143847(16) ENST00000328736(16) ENST00000536337(16) ENST00000553531(9) ENST00000554270(16) ENST00000556564(16) NM_007039(16),BC143846 // Homo sapiens cDNA clone IMAGE:9052361 containing frame-shift errors. // gb_htc // 16 // --- /// BC143847 // Homo sapi
ens cDNA clone IMAGE:9052362. // gb // 16 // --- /// ENST00000328736 // cdna:known chromosome:GRCh37:14:88932122:89016966:-1 gene:ENSG00000070778 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000536337 // cdna:known chromosome:GRCh37:14:88934299:89016874:-1 gene:ENSG00000070778 gene_biotype:protein_coding transcript_biotype:nonsense_mediated_decay // ensembl // 16 // --- /// ENST00000553531 // cdna:putative chromosome:GRCh37:14:88934114:88935960:-1 gene:ENSG00000070778 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 9 // --- /// ENST00000554270 // cdna:known chromosome:GRCh37:14:88934299:89016874:-1 gene:ENSG00000070778 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 16 // --- /// ENST00000556564 // cdna:known chromosome:GRCh37:14:88932125:89021077:-1 gene:ENSG00000070778 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// GENSCAN00
000007110 // cdna:genscan chromosome:GRCh37:14:88934431:89021018:-1 transcript_biotype:protein_coding // ensembl // 9 // --- /// NM_007039 // Homo sapiens protein tyrosine phosphatase non-receptor type 21 (PTPN21) mRNA. // refseq // 16 // ---,---
+1405_i_at,M21121, M21121 /FEATURE= /DEFINITION=HUMTCSM Human T cell-specific protein (RANTES) mRNA complete cds ,M21121,---,Hs.514821,chr17:34198526-34207330 (-) // 57.16 // q12,chemokine (C-C motif) ligand 5,CCL5,chr17q11.2-q12,full length,ENSG00000161570,6352,B2R5J8 /// D0EI67 /// P13501,---,187011,NP_002976,NM_002985,0000165 // MAPK cascade // inferred from mutant phenotype /// 0002407 // dendritic cell chemotaxis // traceable author statement /// 0002544 // chronic inflammatory response // inferred from electronic annotation /// 0002548 // monocyte chemotaxis // inferred by curator /// 0002676 // regulation of chronic inflammatory response // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006816 // calcium ion transport // inferred from direct assay /// 0006874 // cellular calcium ion homeostasis // inferred from direct assay /// 0006887 // exocytosis // inferred from direct assay /// 0006935 // chemotaxis // non-tra
ceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from direct assay /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // inferred from direct assay /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007568 // aging // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from electronic annotation /// 0009636 // response to toxin // inferred from direct assay /// 0009651 // response to salt stress // inferred from electronic annotation /// 0010535 // positive regulation of activation of JAK2 kinase activity // traceable author statement /// 0010628 // positive regulatio
n of gene expression // inferred from electronic annotation /// 0010759 // positive regulation of macrophage chemotaxis // inferred from direct assay /// 0010820 // positive regulation of T cell chemotaxis // inferred from direct assay /// 0010820 // positive regulation of T cell chemotaxis // inferred from electronic annotation /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0014911 // positive regulation of smooth muscle cell migration // inferred from direct assay /// 0018894 // dibenzo-p-dioxin metabolic process // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay ///
0031269 // pseudopodium assembly // inferred from electronic annotation /// 0031328 // positive regulation of cellular biosynthetic process // inferred from direct assay /// 0031584 // activation of phospholipase D activity // inferred from direct assay /// 0031622 // positive regulation of fever generation // inferred from electronic annotation /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from direct assay /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0033634 // positive regulation of cell-cell adhesion mediated by integrin // inferred from direct assay /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0034112 // positive regulation of homotypic cell-cell adhesion // inferred from direct assay /// 003434
1 // response to interferon-gamma // inferred from electronic annotation /// 0034612 // response to tumor necrosis factor // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0042119 // neutrophil activation // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0042531 // positive regulation of tyrosine phosphorylation of STAT protein // inferred from direct assay /// 0043491 // protein kinase B signaling cascade // inferred from mutant phenotype /// 0043526 // neuroprotection // inferred from electronic annotation /// 0043623 // cellular protein complex assembly // inferred from direct assay /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0043922 // negative regulation by host of viral transcription // inferred from direct a
ssay /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from expression pattern /// 0045070 // positive regulation of viral genome replication // traceable author statement /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0045089 // positive regulation of innate immune response // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045672 // positive regulation of osteoclast differentiation // inferred from electronic annotation /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from direct assay /// 0045948 // positive regulation of translational initiation // non-traceable author statement /// 004
6427 // positive regulation of JAK-STAT cascade // traceable author statement /// 0046470 // phosphatidylcholine metabolic process // inferred from electronic annotation /// 0048245 // eosinophil chemotaxis // inferred from direct assay /// 0048246 // macrophage chemotaxis // traceable author statement /// 0048247 // lymphocyte chemotaxis // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050667 // homocysteine metabolic process // inferred from electronic annotation /// 0050863 // regulation of T cell activation // inferred from direct assay /// 0050904 // diapedesis // inferred from electronic annotation /// 0050918 // positive chemotaxis // inferred from direct assay /// 0051262 // protein tetramerization // inferred from direct assay /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051928 // positive regulation of calcium ion transpo
rt // inferred from direct assay /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0060754 // positive regulation of mast cell chemotaxis // inferred from electronic annotation /// 0070098 // chemokine-mediated signaling pathway // traceable author statement /// 0070100 // negative regulation of chemokine-mediated signaling pathway // inferred from direct assay /// 0070233 // negative regulation of T cell apoptotic process // inferred from direct assay /// 0070234 // positive regulation of T cell apoptotic process // inferred from direct assay /// 0070723 // response to cholesterol // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071307 // cellular response to vitamin K // inferred from electronic annotation /// 0071315 // cellular response to morphine // inferred from electronic annotation /// 0071345 // cellular response to cytokine stimulus //
inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from expression pattern /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0071361 // cellular response to ethanol // inferred from electronic annotation /// 0071403 // cellular response to high density lipoprotein particle stimulus // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from direct assay /// 0071448 // cellular response to alkyl hydroperoxide // inferred from electronic annotation /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from electronic annotation /// 0090026 // positive regulation of monocyte chemotaxis // inferred from direct as
say /// 0090026 // positive regulation of monocyte chemotaxis // inferred from electronic annotation /// 2000110 // negative regulation of macrophage apoptotic process // inferred from electronic annotation /// 2000503 // positive regulation of natural killer cell chemotaxis // inferred from direct assay,0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation,0004435 // phosphatidylinositol phospholipase C activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008009 // chemokine activity // inf
erred from direct assay /// 0008009 // chemokine activity // non-traceable author statement /// 0008009 // chemokine activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0016004 // phospholipase activator activity // inferred from direct assay /// 0030298 // receptor signaling protein tyrosine kinase activator activity // inferred from direct assay /// 0031726 // CCR1 chemokine receptor binding // inferred from direct assay /// 0031726 // CCR1 chemokine receptor binding // inferred from physical interaction /// 0031726 // CCR1 chemokine receptor binding // traceable author statement /// 0031726 // CCR1 chemokine receptor binding // inferred from electronic annotation /// 0031729 // CCR4 chemokine receptor binding // traceable author statement /// 0031730 // CCR5 chemokine receptor binding // inferred from physical interaction /// 0042056 // chemoattractant activity // inferred from direct assay /// 0042379
// chemokine receptor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043621 // protein self-association // inferred from direct assay /// 0046817 // chemokine receptor antagonist activity // inferred from direct assay,---,IPR001811 // Chemokine interleukin-8-like domain // 2.2E-26,ENST00000293272(14) ENST00000366113(14) M21121(14) NM_002985(14),ENST00000293272 // cdna:known chromosome:GRCh37:17:34198495:34207499:-1 gene:ENSG00000161570 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 14 // --- /// ENST00000366113 // cdna:putative chromosome:GRCh37:17:34198495:34207797:-1 gene:ENSG00000161570 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 14 // --- /// M21121 // Human T cell-specific protein (RANTES) mRNA complete cds. // gb // 14 // --- /// NM_002985 // Homo sapiens chemokine (C-C motif) ligand 5 (CCL5) mRNA. // refseq // 14 // ---,---
+1431_at,J02843cds, J02843 /FEATURE=cds /DEFINITION=HUMCYPIIE Human cytochrome P450IIE1 (ethanol-inducible) gene complete cds ,J02843,---,Hs.12907,chr10:135340899-135352468 (+) // 99.87 // q26.3,cytochrome P450 family 2 subfamily E polypeptide 1,CYP2E1,chr10q24.3-qter,full length,ENSG00000130649,1571,A8K457 /// F5H694 /// H0Y593 /// H0Y7H4 /// H0YGV5 /// P05181 /// Q16868 /// Q3YA63 /// Q4LBD0 /// Q573G9 /// Q573H0 /// Q59EW1 /// Q6NWT7 /// Q6NWT9,EC:1.14.13.n7,124040,NP_000764,NM_000773,0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from mutant phenotype /// 0010193 // response to ozone // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0016098 // monoterpen
oid metabolic process // inferred from direct assay /// 0017144 // drug metabolic process // inferred from direct assay /// 0017144 // drug metabolic process // inferred from mutant phenotype /// 0042493 // response to drug // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0046483 // heterocycle metabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation,0000139 // Golgi membrane // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred f
rom electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031227 // intrinsic to endoplasmic reticulum membrane // inferred from electronic annotation,0004497 // monooxygenase activity // inferred from direct assay /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0004497 // monooxygenase activity // traceable author statement /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity acting on paired donors with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016709 // oxido
reductase activity acting on paired donors with incorporation or reduction of molecular oxygen NADH or NADPH as one donor and incorporation of one atom of oxygen // traceable author statement /// 0016709 // oxidoreductase activity acting on paired donors with incorporation or reduction of molecular oxygen NADH or NADPH as one donor and incorporation of one atom of oxygen // inferred from electronic annotation /// 0016712 // oxidoreductase activity acting on paired donors with incorporation or reduction of molecular oxygen reduced flavin or flavoprotein as one donor and incorporation of one atom of oxygen // inferred from electronic annotation /// 0019825 // oxygen binding // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0020037 // heme binding // inferred from direct assay /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /
// 0070330 // aromatase activity // inferred from electronic annotation,---,IPR001128 // Cytochrome P450 // 2.6E-156 /// IPR001128 // Cytochrome P450 // 4.7E-119 /// IPR001128 // Cytochrome P450 // 4.8E-104,AF182276(16) AK290822(16) BC067433(14) BC067435(16) ENST00000252945(13) ENST00000368520(12) ENST00000418356(12) ENST00000421586(12) ENST00000463117(13) ENST00000541080(10) J02625(16) NM_000773(16),AB209700 // Homo sapiens mRNA for cytochrome P450 family 2 subfamily E polypeptide 1 variant protein. // gb // 15 // --- /// AF182276 // Homo sapiens cytochrome P450-2E1 (CYP2E1) mRNA complete cds. // gb // 16 // --- /// AK290822 // Homo sapiens cDNA FLJ75676 complete cds highly similar to Homo sapiens cytochrome P450 family 2 subfamily E polypeptide 1(CYP2E1) mRNA. // gb // 16 // --- /// BC067433 // Homo sapiens cytochrome P450 family 2 subfamily E polypeptide 1 mRNA (cDNA clone MGC:79260 IMAGE:7002160) complete cds. // gb // 14 // --- /// BC067435 // Homo sapiens
cytochrome P450 family 2 subfamily E polypeptide 1 mRNA (cDNA clone MGC:79262 IMAGE:7002164) complete cds. // gb // 16 // --- /// ENST00000252945 // cdna:known chromosome:GRCh37:10:135340867:135352620:1 gene:ENSG00000130649 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 13 // --- /// ENST00000368520 // cdna:known chromosome:GRCh37:10:135345080:135374724:1 gene:ENSG00000130649 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 12 // --- /// ENST00000418356 // cdna:novel chromosome:GRCh37:10:135341001:135352315:1 gene:ENSG00000130649 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 12 // --- /// ENST00000421586 // cdna:novel chromosome:GRCh37:10:135341001:135352315:1 gene:ENSG00000130649 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 12 // --- /// ENST00000463117 // cdna:known chromosome:GRCh37:10:135333910:135352626:1 gene:ENSG00000130649 gene_biotype:protein_c
oding transcript_biotype:protein_coding // ensembl // 13 // --- /// ENST00000541080 // cdna:known chromosome:GRCh37:10:135341001:135352315:1 gene:ENSG00000130649 gene_biotype:protein_coding transcript_biotype:nonsense_mediated_decay // ensembl // 10 // --- /// GENSCAN00000032621 // cdna:genscan chromosome:GRCh37:10:135340900:135351494:1 transcript_biotype:protein_coding // ensembl // 12 // --- /// J02625 // Human cytochrome P-450j mRNA complete cds. // gb // 16 // --- /// NM_000773 // Homo sapiens cytochrome P450 family 2 subfamily E polypeptide 1 (CYP2E1) mRNA. // refseq // 16 // ---,S77873 // gb // 1 // Cross Hyb Matching Probes /// ENST00000469258 // ensembl // 5 // Cross Hyb Matching Probes
+1438_at,X75208cds,X75208 /FEATURE=cds /DEFINITION=HSPTKR H.sapiens HEK2 mRNA for protein tyrosine kinase receptor,X75208,---,Hs.2913,chr3:184280023-184299410 (+) // 97.2 // q27.1,EPH receptor B3,EPHB3,chr3q21-qter,full length,ENSG00000182580,2049,P54753,EC:2.7.10.1,601839,NP_004434,NM_004443,0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001655 // urogenital system development // inferred from sequence or structural similarity /// 0001655 // urogenital system development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0
007411 // axon guidance // inferred from sequence or structural similarity /// 0007411 // axon guidance // inferred from electronic annotation /// 0007413 // axonal fasciculation // inferred from sequence or structural similarity /// 0007413 // axonal fasciculation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0016477 // cell migration // inferred from electronic annotation /// 0021952 // central nervous system projection neuron axonogenesis // inferred from electronic annotation /// 0022038 // corpus callosum development // inferred from sequence or structural similarity /// 0022038 // corpus callosum development // inferred from electronic annotation /// 0022407 // regulation of cell-cell adhesion // inferred from direct assay /// 0031290 // retinal ganglion cell axon guidance // inferred from electronic annotation /// 0032314 // regulation of Rac
GTPase activity // inferred from direct assay /// 0034446 // substrate adhesion-dependent cell spreading // inferred from direct assay /// 0043088 // regulation of Cdc42 GTPase activity // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation /// 0048538 // thymus development // inferred from sequence or structural similarity /// 0048538 // thymus development // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from sequence or structural similarity /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0050770 // regulation of axonogenesis // inferred from sequence or structural similarity /// 0050770 // regulation of axonogenesis // inferred from electronic annotation /// 0051965 // positi
ve regulation of synapse assembly // inferred from sequence or structural similarity /// 0051965 // positive regulation of synapse assembly // inferred from electronic annotation /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060021 // palate development // inferred from electronic annotation /// 0060996 // dendritic spine development // inferred from sequence or structural similarity /// 0060996 // dendritic spine development // inferred from electronic annotation /// 0060997 // dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0060997 // dendritic spine morphogenesis // inferred from electronic annotation,0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021
// integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation,0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005003 // ephrin receptor activity // inferred from direct assay /// 0005003 // ephrin receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008046 // axon guidance receptor activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 00
16740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity transferring phosphorus-containing groups // inferred from electronic annotation,---,IPR000719 // Protein kinase catalytic domain // 1.4E-48 /// IPR001090 // Ephrin receptor ligand binding domain // 3.5E-76 /// IPR001245 // Serine-threonine/tyrosine-protein kinase catalytic domain // 5.6E-95 /// IPR003961 // Fibronectin type III // 2.4E-18 /// IPR003961 // Fibronectin type III // 1.7E-17 /// IPR011510 // Sterile alpha motif type 2 // 7.2E-25 /// IPR011641 // Tyrosine-protein kinase ephrin type A/B receptor-like // 4.5E-10 /// IPR021129 // Sterile alpha motif type 1 // 1.0E-26,BC052968(16) ENST00000330394(16) NM_004443(16),BC052968 // Homo sapiens EPH receptor B3 mRNA (cDNA clone MGC:54077 IMAGE:6472607) complete cds. // gb // 16 // --- /// ENST00000330394 // cdna:known chromosome:GRCh37:3:184279572:184300197:1 gene:ENSG00000182580 gene_biotype:protein_coding trans
cript_biotype:protein_coding // ensembl // 16 // --- /// GENSCAN00000011588 // cdna:genscan chromosome:GRCh37:3:184280024:184299410:1 transcript_biotype:protein_coding // ensembl // 16 // --- /// NM_004443 // Homo sapiens EPH receptor B3 (EPHB3) mRNA. // refseq // 16 // ---,---
+1487_at,L38487mRNA, L38487 /FEATURE=mRNA /DEFINITION=HUMHERRA1 Human estrogen receptor-related protein (hERRa1) mRNA 3' end partial cds ,L38487,---,Hs.110849,chr11:64073043-64084210 (+) // 97.02 // q13.1,estrogen-related receptor alpha,ESRRA,chr11q13,full length,ENSG00000173153,2101,A8CGI6 /// F5GWT5 /// F5H0E9 /// H0YGT3 /// P11474 /// Q569H8 /// Q6GMQ8 /// Q8N4S8 /// Q96F89 /// Q96I02,---,601998,NP_004442,NM_004451,0006351 // transcription DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation //
inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045667 // regulation of osteoblast differentiation // inferred from electronic annotation /// 0045670 // regulation of osteoclast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation,0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement,0003677 // DNA binding // traceable author statement /// 0
003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation,Nuclear_Receptors // GenMAPP,IPR000536 // Nuclear hormone recep
tor ligand-binding core // 1.9E-38 /// IPR000536 // Nuclear hormone receptor ligand-binding core // 1.9E-38 /// IPR001628 // Zinc finger nuclear hormone receptor-type // 1.2E-34,BC011528(16) BC063795(16) BC073956(16) BC092470(16) ENST00000000442(13) ENST00000405666(13) ENST00000406310(13) NM_004451(16) X51416(16),BC011528 // Homo sapiens clone IMAGE:3855067 mRNA partial cds. // gb // 16 // --- /// BC063795 // Homo sapiens estrogen-related receptor alpha mRNA (cDNA clone MGC:70614 IMAGE:6527166) complete cds. // gb // 16 // --- /// BC073956 // Homo sapiens estrogen-related receptor alpha mRNA (cDNA clone IMAGE:6011619) partial cds. // gb // 16 // --- /// BC092470 // Homo sapiens estrogen-related receptor alpha mRNA (cDNA clone MGC:104575 IMAGE:30336569) complete cds. // gb // 16 // --- /// ENST00000000442 // cdna:known chromosome:GRCh37:11:64073050:64084210:1 gene:ENSG00000173153 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 13 // -
-- /// ENST00000405666 // cdna:known chromosome:GRCh37:11:64073699:64084215:1 gene:ENSG00000173153 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 13 // --- /// ENST00000406310 // cdna:known chromosome:GRCh37:11:64073044:64084210:1 gene:ENSG00000173153 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 13 // --- /// NM_004451 // Homo sapiens estrogen-related receptor alpha (ESRRA) mRNA. // refseq // 16 // --- /// X51416 // Human mRNA for steroid hormone receptor hERR1. // gb // 16 // ---,---
+1494_f_at,M33318mRNA, M33318 /FEATURE=mRNA /DEFINITION=HUMCPIIA3A Human cytochrome P450IIA3 (CYP2A3) mRNA complete cds ,M33318,---,Hs.250615,chr19:41349446-41356339 (-) // 98.4 // q13.2,cytochrome P450 family 2 subfamily A polypeptide 6,CYP2A6,chr19q13.2,full length,ENSG00000198077 /// ENSG00000255974,1548,F8W816 /// P11509 /// P20853,EC:1.14.14.1,122700 /// 122720 /// 188890 /// 211980,NP_000753,NM_000762,0006805 // xenobiotic metabolic process // traceable author statement /// 0008202 // steroid metabolic process // inferred from mutant phenotype /// 0009804 // coumarin metabolic process // inferred from direct assay /// 0017144 // drug metabolic process // inferred from direct assay /// 0017144 // drug metabolic process // inferred from mutant phenotype /// 0042738 // exogenous drug catabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0046226 // coumarin catabolic process // inferred from dir
ect assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation,0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation,0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0008389 // coumarin 7-hydroxylase activity // inferred from direct assay /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity acting on paired donors with incorporation or reduction of mol
ecular oxygen // inferred from electronic annotation /// 0016712 // oxidoreductase activity acting on paired donors with incorporation or reduction of molecular oxygen reduced flavin or flavoprotein as one donor and incorporation of one atom of oxygen // inferred from electronic annotation /// 0019825 // oxygen binding // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0020037 // heme binding // inferred from direct assay /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070330 // aromatase activity // inferred from electronic annotation,---,IPR001128 // Cytochrome P450 // 1.3E-155 /// IPR001128 // Cytochrome P450 // 9.6E-152 /// IPR001128 // Cytochrome P450 // 2.8E-125,AF182275(13) BC096253(12) BC096254(13) BC096255(13) BC096256(12) ENST00000301141(14) M33318(16) NM_000762(15) X06401(15),AF182275 // Homo sapiens cytochrome P450
-2A6 (CYP2A6) mRNA complete cds. // gb // 13 // --- /// BC096253 // Homo sapiens cytochrome P450 family 2 subfamily A polypeptide 6 mRNA (cDNA clone MGC:116918 IMAGE:40006061) complete cds. // gb // 12 // --- /// BC096254 // Homo sapiens cytochrome P450 family 2 subfamily A polypeptide 6 mRNA (cDNA clone MGC:116919 IMAGE:40006062) complete cds. // gb // 13 // --- /// BC096255 // Homo sapiens cytochrome P450 family 2 subfamily A polypeptide 6 mRNA (cDNA clone MGC:116920 IMAGE:40006064) complete cds. // gb // 13 // --- /// BC096256 // Homo sapiens cytochrome P450 family 2 subfamily A polypeptide 6 mRNA (cDNA clone MGC:116921 IMAGE:40006068) complete cds. // gb // 12 // --- /// ENST00000291764 // cdna:known chromosome:GRCh37:19:41381344:41388657:-1 gene:ENSG00000198077 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 9 // --- /// ENST00000301141 // cdna:known chromosome:GRCh37:19:41349444:41356352:-1 gene:ENSG00000255974 gene_biot
ype:protein_coding transcript_biotype:protein_coding // ensembl // 14 // --- /// ENST00000301146 // cdna:known chromosome:GRCh37:19:41381344:41388657:-1 gene:ENSG00000198077 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 9 // --- /// GENSCAN00000043183 // cdna:genscan chromosome:GRCh37:19:41349701:41356331:-1 transcript_biotype:protein_coding // ensembl // 12 // --- /// M33317 // Human cytochrome P450IIA4 (CYP2A4) mRNA complete cds. // gb // 9 // --- /// M33318 // Human cytochrome P450IIA3 (CYP2A3) mRNA complete cds. // gb // 16 // --- /// NM_000762 // Homo sapiens cytochrome P450 family 2 subfamily A polypeptide 6 (CYP2A6) mRNA. // refseq // 15 // --- /// NM_000764 // Homo sapiens cytochrome P450 family 2 subfamily A polypeptide 7 (CYP2A7) transcript variant 1 mRNA. // refseq // 9 // --- /// NM_030589 // Homo sapiens cytochrome P450 family 2 subfamily A polypeptide 7 (CYP2A7) transcript variant 2 mRNA. // refseq // 9 // --- /// X
06401 // Human cytochrome P450 (IIA subfamily) mRNA fragment. // gb // 15 // --- /// X13930 // Human CYP2A4 mRNA for P-450 IIA4 protein. // gb // 16 // ---,AF209774 // gb // 3 // Cross Hyb Matching Probes /// AY513604 // gb // 3 // Cross Hyb Matching Probes /// AY513605 // gb // 3 // Cross Hyb Matching Probes /// AY513606 // gb // 3 // Cross Hyb Matching Probes /// AY513607 // gb // 3 // Cross Hyb Matching Probes /// AY513608 // gb // 3 // Cross Hyb Matching Probes /// AY513609 // gb // 3 // Cross Hyb Matching Probes /// BC117165 // gb // 7 // Cross Hyb Matching Probes /// BC143325 // gb // 7 // Cross Hyb Matching Probes /// K03192 // gb // 6 // Cross Hyb Matching Probes /// U22029 // gb // 8 // Cross Hyb Matching Probes /// GENSCAN00000025558 // ensembl // 3 // Cross Hyb Matching Probes /// GENSCAN00000043179 // ensembl // 8 // Cross Hyb Matching Probes /// ENST00000330436 // ensembl // 3 // Cross Hyb Matching Probes /// AK309594 // gb_htc // 2 // Cross Hyb Matching Probes
/// NM_000766 // refseq // 3 // Cross Hyb Matching Probes
+1598_g_at,L13720, L13720 /FEATURE= /DEFINITION=HUMGAS Homo sapiens growth-arrest-specific protein (gas) mRNA complete cds ,L13720,---,Hs.646346,chr13:114523546-114567030 (-) // 96.79 // q34,growth arrest-specific 6,GAS6,chr13q34,full length,ENSG00000183087,2621,B3KRQ7 /// B4DZY7 /// E9PBL7 /// Q14393 /// Q658L2,---,600441,NP_000811 /// NP_001137417 /// NP_001137418,NM_000820 /// NM_001143945 /// NM_001143946,0001764 // neuron migration // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001934 // positive regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0001961 // positive regulation of cytokine-mediated signaling pathway // inferred from mutant phenotype /// 0002576 // platelet degranulation // traceable author statement /// 0003104 // positive regulation of glomerular filtration // inferred from sequence or structural similarity /// 0006468 // pr
otein phosphorylation // inferred from direct assay /// 0006508 // proteolysis // traceable author statement /// 0006909 // phagocytosis // inferred from direct assay /// 0007050 // cell cycle arrest // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007167 // enzyme linked receptor protein signaling pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010804 // negative
regulation of tumor necrosis factor-mediated signaling pathway // inferred from direct assay /// 0010934 // macrophage cytokine production // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0017187 // peptidyl-glutamic acid carboxylation // traceable author statement /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0019064 // viral envelope fusion with host membrane // inferred from direct assay /// 0019079 // viral genome replication // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0031589 // cell-substrate adhesion // inferred from electronic annotation /// 0032008 // positive regulation of TOR signaling cascade // inferred from sequence or structural similarity /// 0032148 // activation of protein kinase B activity // inferred from sequence or structural similarity /// 0032689 // negative regulation of interferon-gamma production // inferre
d from direct assay /// 0032715 // negative regulation of interleukin-6 production // inferred from direct assay /// 0032720 // negative regulation of tumor necrosis factor production // inferred from direct assay /// 0032825 // positive regulation of natural killer cell differentiation // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0033159 // negative regulation of protein import into nucleus translocation // inferred from direct assay /// 0035457 // cellular response to interferon-alpha // inferred from direct assay /// 0035690 // cellular response to drug // inferred from direct assay /// 0035754 // B cell chemotaxis // inferred from direct assay /// 0040008 // regulation of growth // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electroni
c annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043277 // apoptotic cell clearance // inferred from direct assay /// 0043277 // apoptotic cell clearance // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0043491 // protein kinase B signaling cascade // inferred from direct assay /// 0043491 // protein kinase B signaling cascade // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription DNA-dependent // inferred from direct assay /// 0046718 // viral entry into host cell
// inferred from direct assay /// 0046813 // virion attachment binding of host cell surface receptor // inferred from direct assay /// 0046827 // positive regulation of protein export from nucleus // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0050711 // negative regulation of interleukin-1 secretion // inferred from direct assay /// 0050766 // positive regulation of phagocytosis // inferred from direct assay /// 0050900 // leukocyte migration // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from direct assay /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from direct assay /// 0070168 // negative regulation of biomineral tissue development // inferred from direct assay ///
0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070527 // platelet aggregation // traceable author statement /// 0071307 // cellular response to vitamin K // inferred from direct assay /// 0071333 // cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0072661 // protein targeting to plasma membrane // inferred from direct assay /// 0085029 // extracellular matrix assembly // inferred from sequence or structural similarity /// 0097028 // dendritic cell differentiation // inferred from expression pattern /// 0097241 // hematopoietic stem cell migration to bone marrow // inferred from direct assay /// 1900142 // negative regulation of oligodendrocyte apoptotic process // inferred from direct assay /// 1900165 // negative regulation of interleukin-6 secretion // inferred from direct assay /// 200027
0 // negative regulation of fibroblast apoptotic process // inferred from direct assay /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from direct assay /// 2000510 // positive regulation of dendritic cell chemotaxis // inferred from direct assay /// 2000533 // negative regulation of renal albumin absorption // inferred from sequence or structural similarity /// 2000669 // negative regulation of dendritic cell apoptotic process // inferred from direct assay,0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005796 // Golgi lumen // traceable author statement /// 0031093 // platelet alpha
granule lumen // traceable author statement,0001786 // phosphatidylserine binding // inferred from direct assay /// 0005102 // receptor binding // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005245 // voltage-gated calcium channel activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030296 // protein tyrosine kinase activator activity // inferred from direct assay /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048018 // receptor agonist activity // inferred from direct assay /// 0048018 // receptor agonist activity // inferred from electronic annotatio
n /// 0060090 // binding bridging // inferred from direct assay,---,IPR000294 // Gamma-carboxyglutamic acid-rich (GLA) domain // 5.8E-18 /// IPR000294 // Gamma-carboxyglutamic acid-rich (GLA) domain // 6.3E-18 /// IPR001791 // Laminin G domain // 6.1E-18 /// IPR001791 // Laminin G domain // 3.7E-16 /// IPR001791 // Laminin G domain // 1.1E-22 /// IPR001791 // Laminin G domain // 5.6E-8 /// IPR001791 // Laminin G domain // 6.8E-18 /// IPR001791 // Laminin G domain // 4.1E-16 /// IPR001791 // Laminin G domain // 1.2E-22 /// IPR001791 // Laminin G domain // 6.1E-8 /// IPR001791 // Laminin G domain // 4.3E-18 /// IPR001791 // Laminin G domain // 2.6E-16 /// IPR001791 // Laminin G domain // 7.6E-23 /// IPR001791 // Laminin G domain // 4.0E-8 /// IPR001791 // Laminin G domain // 9.8E-19 /// IPR001791 // Laminin G domain // 6.0E-17 /// IPR001791 // Laminin G domain // 1.7E-23 /// IPR001791 // Laminin G domain // 9.8E-9 /// IPR001791 // Laminin G domain // 8.6E-19 /// IPR001791 //
Laminin G domain // 5.3E-17 /// IPR001791 // Laminin G domain // 1.5E-23 /// IPR001791 // Laminin G domain // 8.7E-9 /// IPR001881 // EGF-like calcium-binding // 1.9E-10 /// IPR001881 // EGF-like calcium-binding // 7.0E-11 /// IPR001881 // EGF-like calcium-binding // 4.6E-8 /// IPR001881 // EGF-like calcium-binding // 2.1E-10 /// IPR001881 // EGF-like calcium-binding // 7.6E-11 /// IPR001881 // EGF-like calcium-binding // 4.9E-8 /// IPR001881 // EGF-like calcium-binding // 1.4E-10 /// IPR001881 // EGF-like calcium-binding // 5.1E-11 /// IPR001881 // EGF-like calcium-binding // 3.3E-8,AK126533(16) AK290803(15) AK303145(10) BC038984(16) ENST00000327773(16) ENST00000355761(16) ENST00000357389(16) ENST00000418959(16) ENST00000450766(16) ENST00000480426(16) L13720(16) NM_000820(16) NM_001143945(16) NM_001143946(16),AK126533 // Homo sapiens cDNA FLJ44569 fis clone UTERU3009979 highly similar to Homo sapiens growth arrest-specific 6 (GAS6). // gb // 16 // --- /// AK129751 // Homo
sapiens cDNA FLJ26240 fis clone DMC00611. // gb // 16 // --- /// AK290803 // Homo sapiens cDNA FLJ76785 complete cds highly similar to Homo sapiens growth arrest-specific 6 (GAS6) mRNA. // gb // 15 // --- /// AK303145 // Homo sapiens cDNA FLJ57022 complete cds highly similar to Growth-arrest-specific protein 6 precursor. // gb // 10 // --- /// BC038984 // Homo sapiens growth arrest-specific 6 mRNA (cDNA clone MGC:47731 IMAGE:5761791) complete cds. // gb // 16 // --- /// ENST00000327773 // cdna:known chromosome:GRCh37:13:114523531:114567040:-1 gene:ENSG00000183087 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000355761 // cdna:known chromosome:GRCh37:13:114523524:114550056:-1 gene:ENSG00000183087 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000357389 // cdna:known chromosome:GRCh37:13:114523524:114567046:-1 gene:ENSG00000183087 gene_biotype:protein_coding transcript_bio
type:protein_coding // ensembl // 16 // --- /// ENST00000418959 // cdna:known chromosome:GRCh37:13:114523524:114536714:-1 gene:ENSG00000183087 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000450766 // cdna:known chromosome:GRCh37:13:114523524:114539017:-1 gene:ENSG00000183087 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000480426 // cdna:known chromosome:GRCh37:13:114523524:114536714:-1 gene:ENSG00000183087 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 16 // --- /// L13720 // Homo sapiens growth-arrest-specific protein (gas) mRNA complete cds. // gb // 16 // --- /// NM_000820 // Homo sapiens growth arrest-specific 6 (GAS6) transcript variant 1 mRNA. // refseq // 16 // --- /// NM_001143945 // Homo sapiens growth arrest-specific 6 (GAS6) transcript variant 2 mRNA. // refseq // 16 // --- /// NM_001143946 // Homo sapiens growth arrest-spe
cific 6 (GAS6) transcript variant 3 mRNA. // refseq // 16 // ---,---
+160020_at,4870053,Z48481 /FEATURE=cds /DEFINITION=HSMMPM1 H.sapiens mRNA for membrane-type matrix metalloproteinase 1 /NOTE=replacement of probe set 1301_s_at,Z48481,---,Hs.2399,chr14:23305807-23316802 (+) // 92.69 // q11.2,matrix metallopeptidase 14 (membrane-inserted),MMP14,chr14q11-q12,full length,ENSG00000157227,4323,B2R6P3 /// F8VP90 /// F8W1B7 /// P50281,EC:3.4.24.80,600754,NP_004986,NM_004995,0001503 // ossification // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001935 // endothelial cell proliferation // inferred from electronic annotation /// 0006355 // regulation of transcription DNA-dependent // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author stat
ement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030324 // lung development // inferred from electronic annotation /// 0031638 // zymogen activation // inferred from electronic annotation /// 0043615 // astrocyte cell migration // inferred from electronic annotation /// 0043627 // response
to estrogen stimulus // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0048771 // tissue remodeling // inferred from electronic annotation /// 0051895 // negative regulation of focal adhesion assembly // inferred from electronic annotation,0005737 // cytoplasm // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation,0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004222 // metalloendopep
tidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0005178 // integrin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016504 // peptidase activator activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation,Matrix_Metalloproteinases // GenMAPP,IPR001818 // Peptidase M10 metallopeptidase // 7.5E-58 /// IPR002477 // Peptidoglycan binding
-like // 2.5E-15 /// IPR018487 // Hemopexin/matrixin repeat // 1.5E-17 /// IPR018487 // Hemopexin/matrixin repeat // 2.1E-16 /// IPR018487 // Hemopexin/matrixin repeat // 6.0E-18 /// IPR018487 // Hemopexin/matrixin repeat // 2.2E-15 /// IPR021805 // Peptidase M10A matrix metallopeptidase C-terminal // 1.8E-29,ENST00000311852(16) NM_004995(16),ENST00000311852 // cdna:known chromosome:GRCh37:14:23305766:23316970:1 gene:ENSG00000157227 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// NM_004995 // Homo sapiens matrix metallopeptidase 14 (membrane-inserted) (MMP14) mRNA. // refseq // 16 // ---,---
+1729_at,L41690, L41690 /FEATURE= /DEFINITION=HUMTRADD Homo sapiens TNF receptor-1 associated protein (TRADD) mRNA 3' end of cds ,L41690,---,Hs.460996,chr16:67188103-67193780 (-) // 88.92 // q22.1,TNFRSF1A-associated via death domain,TRADD,chr16q22,full length,ENSG00000102871,8717,B3KQZ9 /// B4DWM0 /// Q15628,---,603500,NP_003780,NM_003789 /// NM_153425,0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0008624 // induction
of apoptosis by extracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0033209 // tumor necrosis factor-mediated signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0051798 // positive regulation of hair follicle development // inferred from electronic annotation /// 0097191 // extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 0097191 // extrinsic apoptotic signaling pathway // traceable author statement,0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0043235
// receptor complex // inferred from direct assay,0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019900 // kinase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0060090 // binding bridging // inferred from physical interaction /// 0070513 // death domain binding // inferred from physical interaction,Apoptosis // GenMAPP /// Apoptosis_GenMAPP // GenMAPP /// Apoptosis_KEGG // GenMAPP,IPR000488 // Death // 2.6E-11 /// IPR009095 // TRADD N-terminal // 4.3E-53,AK090673(15) BC004491(15) ENST00000345057(15) ENST00000486556(15) NM_003789(15),AK090673 // Homo sapiens cDNA FLJ33354 fis clone BRACE2005124 highly similar to Tumor necrosis factor receptor type1-associated DEATH domain protein. // gb // 15 // --- /// BC004491 // Ho
mo sapiens TNFRSF1A-associated via death domain mRNA (cDNA clone MGC:11078 IMAGE:3689007) complete cds. // gb // 15 // --- /// ENST00000345057 // cdna:known chromosome:GRCh37:16:67188083:67194201:-1 gene:ENSG00000102871 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 15 // --- /// ENST00000486556 // cdna:known chromosome:GRCh37:16:67188102:67190152:-1 gene:ENSG00000102871 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 15 // --- /// NM_003789 // Homo sapiens TNFRSF1A-associated via death domain (TRADD) mRNA. // refseq // 15 // ---,AB209438 // gb // 1 // Cross Hyb Matching Probes /// BT006934 // gb // 2 // Cross Hyb Matching Probes /// GENSCAN00000036262 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000471490 // ensembl // 1 // Cross Hyb Matching Probes /// AK315654 // gb_htc // 2 // Cross Hyb Matching Probes
+1773_at,L00635, L00635 /FEATURE= /DEFINITION=HUMFPTB Human farnesyl-protein transferase beta-subunit mRNA complete cds ,L00635,---,Hs.325531,chr14:65453653-65528278 (+) // 99.81 // q23.3,CHURC1-FNTB readthrough /// farnesyltransferase CAAX box beta,CHURC1-FNTB /// FNTB,chr14q23 /// chr14q23.3,full length,ENSG00000125954 /// ENSG00000257365,100529261 /// 2342,B3KSC2 /// B4DJ86 /// B4DL54 /// B4E1A0 /// H0YHI0 /// H0YIM3 /// P49356 /// Q86TX8,EC:2.5.1.58,134636,NP_001189487 /// NP_001189488 /// NP_002019,NM_001202558 /// NM_001202559 /// NM_002028,0007275 // multicellular organismal development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotati
on /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0018343 // protein farnesylation // inferred from direct assay /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0045787 // positive regulation of cell cycle // inferred from electronic annotation /// 0045893 // positive regulation of transcription DNA-dependent // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation,0005875 // microtubule associated complex // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation,0003824 // catalytic activity // inferred from electronic annotation /// 0004311 // farnesyltranstransferase activity // inferred from electronic annotation /// 0004659 // prenyltransferase activity // inferred from electronic annotation /
// 0004660 // protein farnesyltransferase activity // inferred from direct assay /// 0004660 // protein farnesyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008144 // drug binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019840 // isoprenoid binding // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation,---,IPR001330 // Prenyltransferase/squalene oxidase // 1.9E-16 /// IPR001330 // Prenyltransferase/squalene oxidase // 5.5E-14 /// IPR001330 // Prenyltransferase/squalene oxidase // 8.6E-16 /// IPR001330 // Prenyltransferase/squalene oxidase // 7.1E-14 /// IPR001330 // Prenyltransferase/squalene oxidase // 5.5E-13 /// I
PR001330 // Prenyltransferase/squalene oxidase // 1.9E-16 /// IPR001330 // Prenyltransferase/squalene oxidase // 5.5E-14 /// IPR001330 // Prenyltransferase/squalene oxidase // 8.6E-16 /// IPR001330 // Prenyltransferase/squalene oxidase // 7.0E-14 /// IPR001330 // Prenyltransferase/squalene oxidase // 5.5E-13 /// IPR001330 // Prenyltransferase/squalene oxidase // 7.4E-17 /// IPR001330 // Prenyltransferase/squalene oxidase // 2.1E-14 /// IPR001330 // Prenyltransferase/squalene oxidase // 3.4E-16 /// IPR001330 // Prenyltransferase/squalene oxidase // 2.7E-14 /// IPR001330 // Prenyltransferase/squalene oxidase // 2.1E-13 /// IPR001330 // Prenyltransferase/squalene oxidase // 9.4E-15 /// IPR001330 // Prenyltransferase/squalene oxidase // 7.2E-14 /// IPR001330 // Prenyltransferase/squalene oxidase // 8.6E-17 /// IPR001330 // Prenyltransferase/squalene oxidase // 2.5E-14 /// IPR001330 // Prenyltransferase/squalene oxidase // 3.9E-16 /// IPR001330 // Prenyltransferase/squalene oxida
se // 3.2E-14 /// IPR001330 // Prenyltransferase/squalene oxidase // 2.5E-13 /// IPR009508 // Transcription activator Churchill // 1.6E-31 /// IPR009508 // Transcription activator Churchill // 2.9E-46 /// IPR009508 // Transcription activator Churchill // 2.9E-46,AK093298(16) AK295972(16) AK296850(11) AK303739(16) BC020232(16) L00635(16) L10414(12) GENSCAN00000020155(10) ENST00000552941(16) ENST00000549987(11) ENST00000447296(11) ENST00000542227(16) ENST00000448390(16) ENST00000246166(16) ENST00000554334(16) ENST00000557300(13) AK315714(10) NM_002028(16) NM_001202558(16) NM_001202559(16),AK093298 // Homo sapiens cDNA FLJ35979 fis clone TESTI2013545 highly similar to Protein farnesyltransferase subunit beta (EC 2.5.1.58). // gb // 16 // --- /// AK295972 // Homo sapiens cDNA FLJ55216 complete cds highly similar to Protein farnesyltransferase subunit beta (EC 2.5.1.58). // gb // 16 // --- /// AK296850 // Homo sapiens cDNA FLJ59570 complete cds highly similar to Protein fa
rnesyltransferase subunit beta (EC 2.5.1.58). // gb // 11 // --- /// AK303739 // Homo sapiens cDNA FLJ58825 complete cds highly similar to Protein farnesyltransferase subunit beta (EC 2.5.1.58). // gb // 16 // --- /// AK315714 // Homo sapiens cDNA FLJ96813 Homo sapiens farnesyltransferase CAAX box beta (FNTB) mRNA. // gb_htc // 10 // --- /// BC020232 // Homo sapiens farnesyltransferase CAAX box beta mRNA (cDNA clone MGC:31935 IMAGE:4652202) complete cds. // gb // 16 // --- /// ENST00000246166 // cdna:known chromosome:GRCh37:14:65453438:65529316:1 gene:ENSG00000257365 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000447296 // cdna:known chromosome:GRCh37:14:65381211:65528079:1 gene:ENSG00000125954 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000448390 // cdna:known chromosome:GRCh37:14:65482301:65529368:1 gene:ENSG00000125954 gene_biotype:protein_coding transcript_bi
otype:protein_coding // ensembl // 16 // --- /// ENST00000542227 // cdna:known chromosome:GRCh37:14:65381203:65528521:1 gene:ENSG00000125954 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000549987 // cdna:novel chromosome:GRCh37:14:65381211:65528079:1 gene:ENSG00000125954 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000552941 // cdna:known chromosome:GRCh37:14:65381203:65528521:1 gene:ENSG00000125954 gene_biotype:protein_coding transcript_biotype:nonsense_mediated_decay // ensembl // 16 // --- /// ENST00000554334 // cdna:known chromosome:GRCh37:14:65482256:65529368:1 gene:ENSG00000257365 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 16 // --- /// ENST00000557300 // cdna:known chromosome:GRCh37:14:65519878:65528123:1 gene:ENSG00000257365 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 13 // --- /// GENSCAN00000020155
// cdna:genscan chromosome:GRCh37:14:65450485:65528030:1 transcript_biotype:protein_coding // ensembl // 10 // --- /// L00635 // Human farnesyl-protein transferase beta-subunit mRNA complete cds. // gb // 16 // --- /// L10414 // Human farnesyltransferase beta-subunit mRNA complete cds. // gb // 12 // --- /// NM_001202558 // Homo sapiens CHURC1-FNTB readthrough (CHURC1-FNTB) transcript variant 2 mRNA. // refseq // 16 // --- /// NM_001202559 // Homo sapiens CHURC1-FNTB readthrough (CHURC1-FNTB) transcript variant 1 mRNA. // refseq // 16 // --- /// NM_002028 // Homo sapiens farnesyltransferase CAAX box beta (FNTB) mRNA. // refseq // 16 // ---,AK024087 // gb // 5 // Cross Hyb Matching Probes
+177_at,U38545, U38545 /FEATURE= /DEFINITION=HSU38545 Human ARF-activated phosphatidylcholine-specific phospholipase D1a (hPLD1) mRNA complete cds ,U38545,---,Hs.382865,chr3:171320592-171528244 (-) // 99.39 // q26.31,phospholipase D1 phosphatidylcholine-specific,PLD1,chr3q26,full length,ENSG00000075651,5337,C9IY79 /// F8WBV7 /// H7C0L3 /// Q13393 /// Q59EA4,EC:3.1.4.4,602382,NP_001123553 /// NP_002653,NM_001130081 /// NM_002662,0006654 // phosphatidic acid biosynthetic process // inferred from electronic annotation /// 0006935 // chemotaxis // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0009395 //
phospholipid catabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation,0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi appara
tus // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0031985 // Golgi cisterna // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation,0003824 // catalytic activity // inferred from electronic annotation /// 0004630 // phospholipase D activity // inferred from electronic annotation /// 0004630 // phospholipase D activity // traceable author statement /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0070290 // NAP
E-specific phospholipase D activity // inferred from electronic annotation,---,IPR001683 // Phox homologous domain // 5.0E-26 /// IPR001683 // Phox homologous domain // 5.3E-26 /// IPR001683 // Phox homologous domain // 2.2E-26 /// IPR001736 // Phospholipase D/Transphosphatidylase // 4.0E-12 /// IPR001736 // Phospholipase D/Transphosphatidylase // 4.2E-12 /// IPR001736 // Phospholipase D/Transphosphatidylase // 2.1E-12 /// IPR001849 // Pleckstrin homology domain // 7.5E-10 /// IPR001849 // Pleckstrin homology domain // 7.8E-10 /// IPR001849 // Pleckstrin homology domain // 3.4E-10,BC068976(16) ENST00000342215(16) ENST00000351298(16) ENST00000356327(16) NM_001130081(16) NM_002662(16) U38545(16),BC068976 // Homo sapiens phospholipase D1 phosphatidylcholine-specific mRNA (cDNA clone MGC:70810 IMAGE:6068382) complete cds. // gb // 16 // --- /// BX648432 // Homo sapiens mRNA; cDNA DKFZp686F18253 (from clone DKFZp686F18253). // gb_htc // 16 // --- /// ENST00000342215 // cdna:kn
own chromosome:GRCh37:3:171318620:171528273:-1 gene:ENSG00000075651 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000351298 // cdna:known chromosome:GRCh37:3:171318616:171528284:-1 gene:ENSG00000075651 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000356327 // cdna:known chromosome:GRCh37:3:171318195:171528228:-1 gene:ENSG00000075651 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// NM_001130081 // Homo sapiens phospholipase D1 phosphatidylcholine-specific (PLD1) transcript variant 2 mRNA. // refseq // 16 // --- /// NM_002662 // Homo sapiens phospholipase D1 phosphatidylcholine-specific (PLD1) transcript variant 1 mRNA. // refseq // 16 // --- /// U38545 // Human ARF-activated phosphatidylcholine-specific phospholipase D1a (hPLD1) mRNA complete cds. // gb // 16 // ---,GENSCAN00000028082 // ensembl // 8 // Cross Hyb Matching Probes
+179_at,U38980, U38980 /FEATURE= /DEFINITION=U38980 Human PMS2 related (hPMSR6) mRNA complete cds ,U38980,---,Hs.675888,chr7:76610265-76645172 (+) // 94.12 // q11.23,DTX2P1-UPK3BP1-PMS2P11 readthrough (non-protein coding),DTX2P1-UPK3BP1-PMS2P11,chr7q11.23,full length,ENSG00000186704 /// ENSG00000242435,441263,B4DML2 /// Q13670,---,---,---,NR_023383,0006298 // mismatch repair // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation,---,0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030983 // mismatched DNA binding // inferred from electronic annotation,---,---,NR_023383(15) U38980(16),AK297517 // Homo sapiens cDNA FLJ59034 complete cds moderately similar to Protein deltex-2. // gb // 15 // -
-- /// ENST00000162863 // cdna:pseudogene chromosome:GRCh37:7:76610419:76673092:1 gene:ENSG00000186704 gene_biotype:pseudogene transcript_biotype:unprocessed_pseudogene // ensembl // 15 // --- /// ENST00000428678 // cdna:pseudogene chromosome:GRCh37:7:76633979:76635091:1 gene:ENSG00000242435 gene_biotype:pseudogene transcript_biotype:unprocessed_pseudogene // ensembl // 12 // --- /// ENST00000440837 // cdna:pseudogene chromosome:GRCh37:7:76624771:76653074:1 gene:ENSG00000186704 gene_biotype:pseudogene transcript_biotype:unprocessed_pseudogene // ensembl // 15 // --- /// GENSCAN00000011901 // cdna:genscan chromosome:GRCh37:7:76600605:76647649:1 transcript_biotype:protein_coding // ensembl // 13 // --- /// NR_023383 // Homo sapiens DTX2P1-UPK3BP1-PMS2P11 readthrough (non-protein coding) (DTX2P1-UPK3BP1-PMS2P11) non-coding RNA. // refseq // 15 // --- /// TCONS_l2_00026034-XLOC_l2_013485 // linc-CCDC146-1 chr7:+:76589130-76643571 // broad-tucp // 12 // --- /// TCONS_l2_00026039
-XLOC_l2_013485 // linc-CCDC146-1 chr7:+:76597088-76636346 // broad-tucp // 12 // --- /// TCONS_l2_00026044-XLOC_l2_013485 // linc-CCDC146-1 chr7:+:76624844-76641322 // broad-tucp // 15 // --- /// TCONS_l2_00026045-XLOC_l2_013485 // linc-CCDC146-1 chr7:+:76624861-76641320 // broad-tucp // 12 // --- /// TCONS_l2_00026047-XLOC_l2_013485 // linc-CCDC146-1 chr7:+:76629591-76671381 // broad-tucp // 15 // --- /// TCONS_l2_00026049-XLOC_l2_013485 // linc-CCDC146-1 chr7:+:76634109-76641650 // broad-tucp // 15 // --- /// TCONS_l2_00026050-XLOC_l2_013485 // linc-CCDC146-1 chr7:+:76634717-76641293 // broad-tucp // 15 // --- /// TCONS_l2_00027144-XLOC_l2_013485 // linc-CCDC146-1 chr7:+:76610138-76653074 // broad-tucp // 15 // --- /// TCONS_l2_00027145-XLOC_l2_013485 // linc-CCDC146-1 chr7:+:76610138-76673095 // broad-tucp // 15 // --- /// U38980 // Human PMS2 related (hPMSR6) mRNA complete cds. // gb // 16 // ---,AK290096 // gb // 4 // Cross Hyb Matching Probes /// AY233462 // gb // 4
// Cross Hyb Matching Probes /// BC004304 // gb // 4 // Cross Hyb Matching Probes /// GENSCAN00000022147 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000434948 // ensembl // 7 // Cross Hyb Matching Probes /// ENST00000334348 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000257632 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000394849 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000490360 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000469114 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000419923 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000448265 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000443097 // ensembl // 4 // Cross Hyb Matching Probes /// NM_030570 // refseq // 4 // Cross Hyb Matching Probes /// NM_182684 // refseq // 4 // Cross Hyb Matching Probes
+1861_at,U66879, U66879 /FEATURE= /DEFINITION=HSU66879 Human Bcl-2 binding component 6 (bbc6) mRNA complete cds ,U66879,---,Hs.370254,chr11:64037301-64051883 (-) // 97.38 // q13.1,BCL2-associated agonist of cell death,BAD,chr11q13.1,full length,ENSG00000002330,572,A8MXU7 /// B4DZQ9 /// F5GY71 /// F5H1R6 /// F5H3B1 /// Q6FH21 /// Q92934,---,603167,NP_004313 /// NP_116784,NM_004322 /// NM_032989,0006007 // glucose catabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred fr
om sequence or structural similarity /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // inferred from mutant phenotype /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // inferred from mutant phenotype /// 0008633 // activation of pro-apoptotic gene products // traceable autho
r statement /// 0010918 // positive regulation of mitochondrial membrane potential // inferred from sequence or structural similarity /// 0010918 // positive regulation of mitochondrial membrane potential // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0033133 // positive regulation of glucokinase activity // inferred from sequence or structural similarity /// 0033133 // positive regulation of glucokinase activity // inferred from electronic annotation /// 0035774 // positive regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042593 //
glucose homeostasis // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043281 // regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0044342 // type B pancreatic cell proliferation // inferred from sequence or structural similarity /// 0044342 // type B pancreatic cell proliferation // inferred from electronic annotation /// 0045579 // positive regulation of B cell differentiation // inferred from electronic annotation /// 0045
582 // positive regulation of T cell differentiation // inferred from electronic annotation /// 0046031 // ADP metabolic process // inferred from sequence or structural similarity /// 0046031 // ADP metabolic process // inferred from electronic annotation /// 0046034 // ATP metabolic process // inferred from sequence or structural similarity /// 0046034 // ATP metabolic process // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from mutant phenotype /// 0046931 // pore complex assembly // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050679 // positive regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0060154 // cellular process regulating host cell cycle in response to virus // inferred from electronic annotation /// 0
071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071316 // cellular response to nicotine // inferred from direct assay /// 0071396 // cellular response to lipid // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 0097191 // extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2000078 // positive regulation of type B pancreatic cell development // inferred from sequence or structural similarity /// 2000078 // positive regulation of type B pancreatic cell development // inferred from electronic annotation,0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membran
e // inferred from direct assay /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation,0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from mutant phenotype /// 0008289 // lipid binding // inferred from direct assay /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // inferred from direct assay /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019903 // protein phosphatase binding //
inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation,Apoptosis // GenMAPP /// Apoptosis_KEGG // GenMAPP,IPR018868 // Pro-apoptotic Bcl-2 protein BAD // 4.2E-97 /// IPR018868 // Pro-apoptotic Bcl-2 protein BAD // 3.0E-28 /// IPR018868 // Pro-apoptotic Bcl-2 protein BAD // 5.4E-43 /// IPR018868 // Pro-apoptotic Bcl-2 protein BAD // 1.2E-33 /// IPR018868 // Pro-apoptotic Bcl-2 protein BAD // 4.8E-83,AB451254(16) AF031523(16) AK291863(16) AK303051(16) BC001901(16) BC095431(16) BT006678(16) CR541935(16) CR541959(16) ENST00000309032(16) ENST00000394531(16) ENST00000394532(16) ENST00000492141(16) ENST00000493798(16) ENST00000540152(16) NM_004322(16) NM_032989(16) U66879(16),AB451254 // Homo sapiens BAD mRNA for BCL2-antagonist of cell death protein complete cds clone: FLJ08066AAAN. // gb // 16 // --- /// AF031523 // Homo sapiens bcl-xL/bcl-2 associated death promoter (BAD) mRNA complete cds. // gb // 1
6 // --- /// AK291863 // Homo sapiens cDNA FLJ75743 complete cds highly similar to Homo sapiens BCL2-antagonist of cell death (BAD) transcript variant 1 mRNA. // gb // 16 // --- /// AK303051 // Homo sapiens cDNA FLJ61193 complete cds highly similar to Bcl2 antagonist of cell death. // gb // 16 // --- /// BC001901 // Homo sapiens BCL2-associated agonist of cell death mRNA (cDNA clone MGC:2100 IMAGE:3537914) complete cds. // gb // 16 // --- /// BC095431 // Homo sapiens BCL2-associated agonist of cell death mRNA (cDNA clone MGC:111080 IMAGE:30377088) complete cds. // gb // 16 // --- /// BT006678 // Homo sapiens BCL2-antagonist of cell death mRNA complete cds. // gb // 16 // --- /// CR541935 // Homo sapiens full open reading frame cDNA clone RZPDo834A0634D for gene BAD BCL2-antagonist of cell death; complete cds incl. stopcodon. // gb // 16 // --- /// CR541959 // Homo sapiens full open reading frame cDNA clone RZPDo834G0534D for gene BAD BCL2-antagonist of cell death
; complete cds without stopcodon. // gb // 16 // --- /// ENST00000309032 // cdna:known chromosome:GRCh37:11:64037306:64052141:-1 gene:ENSG00000002330 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000394531 // cdna:putative chromosome:GRCh37:11:64037728:64052125:-1 gene:ENSG00000002330 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000394532 // cdna:known chromosome:GRCh37:11:64037302:64052111:-1 gene:ENSG00000002330 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000492141 // cdna:putative chromosome:GRCh37:11:64037780:64040328:-1 gene:ENSG00000002330 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST00000493798 // cdna:putative chromosome:GRCh37:11:64037741:64039340:-1 gene:ENSG00000002330 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// ENST000
00540152 // cdna:known chromosome:GRCh37:11:64037305:64052175:-1 gene:ENSG00000002330 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 16 // --- /// GENSCAN00000009323 // cdna:genscan chromosome:GRCh37:11:64037523:64052713:-1 transcript_biotype:protein_coding // ensembl // 13 // --- /// NM_004322 // Homo sapiens BCL2-associated agonist of cell death (BAD) transcript variant 1 mRNA. // refseq // 16 // --- /// NM_032989 // Homo sapiens BCL2-associated agonist of cell death (BAD) transcript variant 2 mRNA. // refseq // 16 // --- /// U66879 // Human Bcl-2 binding component 6 (bbc6) mRNA complete cds. // gb // 16 // ---,AK023420 // gb // 13 // Negative Strand Matching Probes
+200000_s_at,g5453983,gb:NM_006445.1 /DEF=Homo sapiens U5 snRNP-specific protein (220 kD) ortholog of S. cerevisiae Prp8p (PRP8) mRNA. /FEA=mRNA /GEN=PRP8 /PROD=U5 snRNP-specific protein (220 kD) ortholog ofS. cerevisiae Prp8p /DB_XREF=gi:5453983 /UG=Hs.181368 U5 snRNP-specific protein (220 kD) ortholog of S. cerevisiae Prp8p /FL=gb:AB007510.1 gb:AF092565.1 gb:NM_006445.1,NM_006445,Hs.181368,Hs.181368,chr17:1553923-1588100 (-) // 99.2 // p13.3,PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae),PRPF8,chr17p13.3,full length,ENSG00000174231,10594,B4DK16 /// F5H2I4 /// I3L0J9 /// I3L1T8 /// I3L3Z8 /// Q53GM6 /// Q6JH02 /// Q6JH03 /// Q6P2Q9,---,600059 /// 607300,NP_006436,NM_006445,0000375 // RNA splicing via transesterification reactions // traceable author statement /// 0000398 // nuclear mRNA splicing via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing via spliceosome // traceable author statement /// 0000398 // nuclear mRNA splicing via
spliceosome // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement,0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005682 // U5 snRNP // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay,0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction,---,IPR000555 // JAB1/M
ov34/MPN/PAD-1 // 2.9E-16 /// IPR012591 // Pre-mRNA-processing-splicing factor 8 // 2.6E-84 /// IPR012592 // PROCN // 5.7E-226 /// IPR012984 // PRO C-terminal // 1.9E-24 /// IPR012984 // PRO C-terminal // 1.4E-54 /// IPR019580 // Pre-mRNA-processing-splicing factor 8 U6-snRNA-binding // 5.9E-97 /// IPR019580 // Pre-mRNA-processing-splicing factor 8 U6-snRNA-binding // 4.6E-81 /// IPR019581 // Pre-mRNA-processing-splicing factor 8 U5-snRNA-binding // 3.1E-73 /// IPR019582 // RNA recognition motif spliceosomal PrP8 // 9.0E-49 /// IPR021983 // PRP8 domain IV core // 2.4E-132 /// IPR021983 // PRP8 domain IV core // 2.4E-107,AB007510(11) AF092565(11) AK296344(11) BC034545(11) BC064370(11) BX649099(11) ENST00000304992(11) ENST00000540177(11) ENST00000571958(10) ENST00000572621(11) ENST00000572723(11) NM_006445(11),AB007510 // Homo sapiens mRNA for PRP8 protein complete cds. // gb // 11 // --- /// AF092565 // Homo sapiens splicing factor Prp8 mRNA complete cds. // gb // 11
// --- /// AK296344 // Homo sapiens cDNA FLJ57882 complete cds highly similar to Pre-mRNA-processing-splicing factor 8. // gb // 11 // --- /// BC034545 // Homo sapiens PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae) mRNA (cDNA clone IMAGE:4473590) with apparent retained intron. // gb_htc // 11 // --- /// BC064370 // Homo sapiens PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae) mRNA (cDNA clone MGC:74762 IMAGE:5587081) complete cds. // gb // 11 // --- /// BX649099 // Homo sapiens mRNA; cDNA DKFZp686L08123 (from clone DKFZp686L08123). // gb // 11 // --- /// ENST00000304992 // cdna:known chromosome:GRCh37:17:1553923:1588176:-1 gene:ENSG00000174231 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000540177 // cdna:known chromosome:GRCh37:17:1553924:1588141:-1 gene:ENSG00000174231 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000571958 // cdna:putative chromoso
me:GRCh37:17:1553923:1554563:-1 gene:ENSG00000174231 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 10 // --- /// ENST00000572621 // cdna:novel chromosome:GRCh37:17:1553925:1588131:-1 gene:ENSG00000174231 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000572723 // cdna:known chromosome:GRCh37:17:1554134:1555440:-1 gene:ENSG00000174231 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 11 // --- /// GENSCAN00000022640 // cdna:genscan chromosome:GRCh37:17:1554096:1587865:-1 transcript_biotype:protein_coding // ensembl // 11 // --- /// NM_006445 // Homo sapiens PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae) (PRPF8) mRNA. // refseq // 11 // ---,---
+200001_at,g4502564,gb:NM_001749.1 /DEF=Homo sapiens calpain 4 small subunit (30K) (CAPN4) mRNA. /FEA=mRNA /GEN=CAPN4 /PROD=calpain 4 small subunit /DB_XREF=gi:4502564 /UG=Hs.74451 calpain 4 small subunit (30K) /FL=gb:BC000592.1 gb:NM_001749.1,NM_001749,Hs.74451,Hs.515371,chr19:36630916-36641255 (+) // 93.37 // q13.12,calpain small subunit 1,CAPNS1,chr19q13.12,full length,ENSG00000126247,826,P04632,EC:3.4.22.17,114170,NP_001003962 /// NP_001740,NM_001003962 /// NM_001749,0006508 // proteolysis // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement,0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation,0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004198 // calcium-dependent cysteine-type endopeptidase ac
tivity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation,Integrin-mediated_cell_adhesion_KEGG // GenMAPP,---,AK289606(11) BC000592(11) BC007779(11) BC011903(10) BC017308(11) BC018931(11) BC021933(11) BC023643(11) BC064998(11) ENST00000246533(11) NM_001003962(11) NM_001749(11),AK289606 // Homo sapiens cDNA FLJ75451 complete cds highly similar to Homo sapiens calpain small subunit 1 (CAPNS1) mRNA. // gb // 11 // --- /// BC000592 // Homo sapiens calpain small subunit 1 mRNA (cDNA clone MGC:1790 IMAGE:3347146) complete cds. // gb // 11 // --- /// BC007779 // Homo sapiens calpain small subunit 1 mRNA (cDNA clone MGC:12745 IMAGE:4301394) complete cds. // gb // 11 // --- /// BC011903 // Homo sapiens calpain small subunit 1 mRNA (cDNA clone MGC:20290 IMAGE:412057
9) complete cds. // gb // 10 // --- /// BC017308 // Homo sapiens calpain small subunit 1 mRNA (cDNA clone MGC:29672 IMAGE:5089022) complete cds. // gb // 11 // --- /// BC018931 // Homo sapiens calpain small subunit 1 mRNA (cDNA clone MGC:14442 IMAGE:4303926) complete cds. // gb // 11 // --- /// BC021933 // Homo sapiens calpain small subunit 1 mRNA (cDNA clone MGC:32094 IMAGE:4872635) complete cds. // gb // 11 // --- /// BC023643 // Homo sapiens calpain small subunit 1 mRNA (cDNA clone MGC:29704 IMAGE:5017512) complete cds. // gb // 11 // --- /// BC064998 // Homo sapiens calpain small subunit 1 mRNA (cDNA clone MGC:75186 IMAGE:5785274) complete cds. // gb // 11 // --- /// ENST00000246533 // cdna:known chromosome:GRCh37:19:36630918:36641254:1 gene:ENSG00000126247 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// NM_001003962 // Homo sapiens calpain small subunit 1 (CAPNS1) transcript variant 2 mRNA. // refseq // 11 //
--- /// NM_001749 // Homo sapiens calpain small subunit 1 (CAPNS1) transcript variant 1 mRNA. // refseq // 11 // ---,BT009775 // gb // 5 // Cross Hyb Matching Probes /// GENSCAN00000004679 // ensembl // 5 // Cross Hyb Matching Probes
+200002_at,g6005859,gb:NM_007209.1 /DEF=Homo sapiens ribosomal protein L35 (RPL35) mRNA. /FEA=mRNA /GEN=RPL35 /PROD=ribosomal protein L35 /DB_XREF=gi:6005859 /UG=Hs.182825 ribosomal protein L35 /FL=gb:BC000348.1 gb:U12465.1 gb:NM_007209.1,NM_007209,Hs.182825,Hs.182825,chr9:127620162-127624207 (-) // 97.46 // q33.3,ribosomal protein L35,RPL35,chr9q34.1,full length,ENSG00000136942,11224,F2Z388 /// H0Y3A0 /// P42766,---,---,NP_009140,NM_007209,0000184 // nuclear-transcribed mRNA catabolic process nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslati
onal protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement,0005622 // intracellular // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement ///
0030529 // ribonucleoprotein complex // inferred from electronic annotation,0003729 // mRNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement,Ribosomal_Proteins // GenMAPP,IPR001854 // Ribosomal protein L29 // 2.3E-25 /// IPR001854 // Ribosomal protein L29 // 4.5E-25,AK291072(11) BC000348(11) BC010919(11) BC071915(11) BC094828(11) CR456877(11) ENST00000348462(11) ENST00000373570(11) ENST00000487431(11) ENST00000493018(11) ENST00000495728(9) NM_007209(11) U12465(11),AK291072 // Homo sapiens cDNA FLJ76395 complete cds highly similar to Homo sapiens ribosomal protein L35 (RPL35) mRNA. // gb // 11 // --- /// BC000348 // Homo sapiens ribosomal protein L35 mRNA (cDNA clone MGC:8582 IMAGE:2960987) complete cds. // gb // 11 // --- /// BC0109
19 // Homo sapiens ribosomal protein L35 mRNA (cDNA clone MGC:13488 IMAGE:4251487) complete cds. // gb // 11 // --- /// BC071915 // Homo sapiens ribosomal protein L35 mRNA (cDNA clone MGC:88597 IMAGE:4896387) complete cds. // gb // 11 // --- /// BC094828 // Homo sapiens ribosomal protein L35 mRNA (cDNA clone MGC:104823 IMAGE:4548321) complete cds. // gb // 11 // --- /// CR456877 // Homo sapiens full open reading frame cDNA clone RZPDo834G126D for gene RPL35 ribosomal protein L35; complete cds incl. stopcodon. // gb // 11 // --- /// ENST00000348462 // cdna:known chromosome:GRCh37:9:127620163:127624240:-1 gene:ENSG00000136942 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000373570 // cdna:known chromosome:GRCh37:9:127620159:127623835:-1 gene:ENSG00000136942 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000487431 // cdna:known chromosome:GRCh37:9:127620162:127624215:-1 ge
ne:ENSG00000136942 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 11 // --- /// ENST00000493018 // cdna:known chromosome:GRCh37:9:127620162:127624214:-1 gene:ENSG00000136942 gene_biotype:protein_coding transcript_biotype:nonsense_mediated_decay // ensembl // 11 // --- /// ENST00000495728 // cdna:known chromosome:GRCh37:9:127623258:127624260:-1 gene:ENSG00000136942 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 9 // --- /// GENSCAN00000034230 // cdna:genscan chromosome:GRCh37:9:127620197:127624069:-1 transcript_biotype:protein_coding // ensembl // 11 // --- /// NM_007209 // Homo sapiens ribosomal protein L35 (RPL35) mRNA. // refseq // 11 // --- /// U12465 // Human ribosomal protein L35 mRNA complete cds. // gb // 11 // ---,GENSCAN00000001432 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000002456 // ensembl // 3 // Cross Hyb Matching Probes /// GENSCAN00000031040 // ensembl // 4 // Cross Hyb M
atching Probes /// GENSCAN00000045943 // ensembl // 6 // Cross Hyb Matching Probes /// ENST00000450819 // ensembl // 6 // Cross Hyb Matching Probes /// ENST00000402419 // ensembl // 7 // Cross Hyb Matching Probes /// ENST00000433398 // ensembl // 3 // Cross Hyb Matching Probes /// ENST00000446059 // ensembl // 2 // Cross Hyb Matching Probes
+200003_s_at,g4506626,gb:NM_000991.1 /DEF=Homo sapiens ribosomal protein L28 (RPL28) mRNA. /FEA=mRNA /GEN=RPL28 /PROD=ribosomal protein L28 /DB_XREF=gi:4506626 /UG=Hs.4437 ribosomal protein L28 /FL=gb:BC000072.1 gb:NM_000991.1 gb:U14969.1,NM_000991,Hs.4437,Hs.652114,chr19:55897314-55899740 (+) // 98.56 // q13.42,ribosomal protein L28,RPL28,chr19q13.4,full length,ENSG00000108107,6158,C9JB50 /// E9PB24 /// G5E9L2 /// H0YKD8 /// H0YLP6 /// H0YMF4 /// P46779 /// Q59F34,EC:3.6.5.3,603638,NP_000982 /// NP_001129606 /// NP_001129607 /// NP_001129608 /// NP_001129609,NM_000991 /// NM_001136134 /// NM_001136135 /// NM_001136136 /// NM_001136137,0000184 // nuclear-transcribed mRNA catabolic process nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable
author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement,0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct
assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation,0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement /// 0005515 // protein binding // inferred from physical interaction,Ribosomal_Proteins // GenMAPP,---,AB209627(10) AK096870(11) AK293736(11) BC010173(11) BC010182(11) BC011582(11) CR457024(11) ENST00000344063(11) ENST00000426763(10) ENST00000428193(10) ENST00000431533(10) ENST00000458349(11) ENST00000558752(10) ENST00000558815(11) ENST00000559463(11) ENST00000560055(11) ENST00000560583(11) ENST00000560881(10) NM_000991(11) NM_001136134(11) NM_001136135(11) NM_001136136(10) NM_001136137(10) U14969(11),AB209627 /
/ Homo sapiens mRNA for ribosomal protein L28 variant protein. // gb // 10 // --- /// AK096870 // Homo sapiens cDNA FLJ39551 fis clone RECTM2000220 highly similar to 60S RIBOSOMAL PROTEIN L28. // gb // 11 // --- /// AK293736 // Homo sapiens cDNA FLJ57954 complete cds highly similar to 60S ribosomal protein L28. // gb // 11 // --- /// BC010173 // Homo sapiens ribosomal protein L28 mRNA (cDNA clone MGC:20081 IMAGE:4054251) complete cds. // gb // 11 // --- /// BC010182 // Homo sapiens ribosomal protein L28 mRNA (cDNA clone MGC:20328 IMAGE:4301420) complete cds. // gb // 11 // --- /// BC011582 // Homo sapiens ribosomal protein L28 mRNA (cDNA clone MGC:20378 IMAGE:4561118) complete cds. // gb // 11 // --- /// CR457024 // Homo sapiens full open reading frame cDNA clone RZPDo834C0115D for gene RPL28 ribosomal protein L28; complete cds incl. stopcodon. // gb // 11 // --- /// ENST00000344063 // cdna:known chromosome:GRCh37:19:55896713:55903453:1 gene:ENSG00000108107 gene_b
iotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000426763 // cdna:known chromosome:GRCh37:19:55897718:55903455:1 gene:ENSG00000108107 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 10 // --- /// ENST00000428193 // cdna:known chromosome:GRCh37:19:55897300:55898978:1 gene:ENSG00000108107 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 10 // --- /// ENST00000431533 // cdna:known chromosome:GRCh37:19:55897300:55898404:1 gene:ENSG00000108107 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 10 // --- /// ENST00000458349 // cdna:known chromosome:GRCh37:19:55897726:55903107:1 gene:ENSG00000108107 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000558752 // cdna:putative chromosome:GRCh37:19:55897725:55898599:1 gene:ENSG00000108107 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 10 //
--- /// ENST00000558815 // cdna:known chromosome:GRCh37:19:55897300:55903171:1 gene:ENSG00000108107 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000559463 // cdna:known chromosome:GRCh37:19:55897329:55899741:1 gene:ENSG00000108107 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000560055 // cdna:putative chromosome:GRCh37:19:55897304:55914612:1 gene:ENSG00000108107 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000560583 // cdna:known chromosome:GRCh37:19:55897302:55900256:1 gene:ENSG00000108107 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000560881 // cdna:known chromosome:GRCh37:19:55897311:55899711:1 gene:ENSG00000108107 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 10 // --- /// GENSCAN00000023828 // cdna:genscan chromosome:GRCh37:19:55897032:5
5899700:1 transcript_biotype:protein_coding // ensembl // 11 // --- /// NM_000991 // Homo sapiens ribosomal protein L28 (RPL28) transcript variant 2 mRNA. // refseq // 11 // --- /// NM_001136134 // Homo sapiens ribosomal protein L28 (RPL28) transcript variant 1 mRNA. // refseq // 11 // --- /// NM_001136135 // Homo sapiens ribosomal protein L28 (RPL28) transcript variant 3 mRNA. // refseq // 11 // --- /// NM_001136136 // Homo sapiens ribosomal protein L28 (RPL28) transcript variant 4 mRNA. // refseq // 10 // --- /// NM_001136137 // Homo sapiens ribosomal protein L28 (RPL28) transcript variant 5 mRNA. // refseq // 10 // --- /// U14969 // Human ribosomal protein L28 mRNA complete cds. // gb // 11 // ---,GENSCAN00000026992 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000031996 // ensembl // 3 // Cross Hyb Matching Probes /// GENSCAN00000040365 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000558131 // ensembl // 8 // Cross Hyb Matching Probes ///
ENST00000461223 // ensembl // 3 // Cross Hyb Matching Probes /// ENST00000398900 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000464124 // ensembl // 2 // Cross Hyb Matching Probes /// BC009885 // gb_htc // 11 // Negative Strand Matching Probes
+200004_at,g4503538,gb:NM_001418.1 /DEF=Homo sapiens eukaryotic translation initiation factor 4 gamma 2 (EIF4G2) mRNA. /FEA=mRNA /GEN=EIF4G2 /PROD=eukaryotic translation initiation factor 4gamma 2 /DB_XREF=gi:4503538 /UG=Hs.183684 eukaryotic translation initiation factor 4 gamma 2 /FL=gb:U73824.1 gb:U76111.1 gb:NM_001418.1,NM_001418,Hs.183684,Hs.183684,chr11:10818601-10830471 (-) // 97.46 // p15.3,eukaryotic translation initiation factor 4 gamma 2,EIF4G2,chr11p15,full length,ENSG00000110321,1982,B4DZF2 /// D3DQV9 /// E9PCV8 /// E9PKF8 /// H0Y3P2 /// H0YCF8 /// H0YCH5 /// H0YD77 /// H0YD99 /// H0YDC0 /// H0YDP4 /// H0YE22 /// H0YE44 /// H0YE87 /// H0YEC5 /// H0YEI7 /// H0YEN8 /// H0YEW3 /// P78344 /// Q2TU89 /// Q3LIE0 /// Q59G42,---,602325,NP_001036024 /// NP_001166176 /// NP_001409,NM_001042559 /// NM_001172705 /// NM_001418,0006412 // translation // inferred from direct assay /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferr
ed from electronic annotation /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // inferred from direct assay /// 0007050 // cell cycle arrest // traceable author statement /// 0008219 // cell death // traceable author statement /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement,0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // inferred from direct assay,0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initi
ation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity nucleic acid binding // inferred from direct assay /// 0008135 // translation factor activity nucleic acid binding // traceable author statement,Circadian_Exercise // GenMAPP,IPR003307 // W2 domain // 3.3E-23 /// IPR003307 // W2 domain // 3.1E-23 /// IPR003890 // MIF4G-like type 3 // 3.4E-61 /// IPR003890 // MIF4G-like type 3 // 3.1E-61 /// IPR003891 // Initiation factor eIF-4 gamma MA3 // 4.4E-22 /// IPR003891 // Initiation factor eIF-4 gamma MA3 // 4.2E-22,AB063323(11) AB073654(11) AY513274(11) BC018746(11) BC018975(11) BC039851(11) BC043149(11) BC065276(11) BC111415(11) BC111548(11) BX647799(11) ENST00000339995(11) ENST00000396525(11) ENST00000525681(11) ENST00000526148(11) ENST00000532383(11) NM_001042559(11) NM_
001172705(11) NM_001418(11) U73824(11) U76111(10),AB063323 // Homo sapiens mRNA for eukaryotic translation initiation factor 4 gamma 2 complete cds. // gb // 11 // --- /// AB073654 // Homo sapiens primary neuroblastoma cDNA clone:Nbla00315 full insert sequence. // gb // 11 // --- /// AK127230 // Homo sapiens cDNA FLJ45297 fis clone BRHIP3003395. // gb // 11 // --- /// AY513274 // Homo sapiens aging-associated protein 1 (AAG1) mRNA complete cds. // gb // 11 // --- /// BC018746 // Homo sapiens eukaryotic translation initiation factor 4 gamma 2 mRNA (cDNA clone MGC:31927 IMAGE:4299481) complete cds. // gb // 11 // --- /// BC018975 // Homo sapiens eukaryotic translation initiation factor 4 gamma 2 mRNA (cDNA clone MGC:20099 IMAGE:3951907) complete cds. // gb // 11 // --- /// BC039851 // Homo sapiens eukaryotic translation initiation factor 4 gamma 2 mRNA (cDNA clone MGC:48877 IMAGE:6066795) complete cds. // gb // 11 // --- /// BC043149 // Homo sapiens eukaryotic tr
anslation initiation factor 4 gamma 2 mRNA (cDNA clone MGC:41891 IMAGE:5295212) complete cds. // gb // 11 // --- /// BC065276 // Homo sapiens eukaryotic translation initiation factor 4 gamma 2 mRNA (cDNA clone MGC:75160 IMAGE:6164568) complete cds. // gb // 11 // --- /// BC111415 // Homo sapiens eukaryotic translation initiation factor 4 gamma 2 mRNA (cDNA clone MGC:133054 IMAGE:40008735) complete cds. // gb // 11 // --- /// BC111548 // Homo sapiens eukaryotic translation initiation factor 4 gamma 2 mRNA (cDNA clone MGC:133053 IMAGE:40008727) complete cds. // gb // 11 // --- /// BX647799 // Homo sapiens mRNA; cDNA DKFZp686L178 (from clone DKFZp686L178). // gb // 11 // --- /// ENST00000339995 // cdna:known chromosome:GRCh37:11:10818601:10830657:-1 gene:ENSG00000110321 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000396525 // cdna:known chromosome:GRCh37:11:10818717:10830255:-1 gene:ENSG00000110321 gene_biotype:pro
tein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000525681 // cdna:known chromosome:GRCh37:11:10818600:10829009:-1 gene:ENSG00000110321 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000526148 // cdna:known chromosome:GRCh37:11:10818597:10829520:-1 gene:ENSG00000110321 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000532383 // cdna:known chromosome:GRCh37:11:10818601:10829575:-1 gene:ENSG00000110321 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 11 // --- /// NM_001042559 // Homo sapiens eukaryotic translation initiation factor 4 gamma 2 (EIF4G2) transcript variant 2 mRNA. // refseq // 11 // --- /// NM_001172705 // Homo sapiens eukaryotic translation initiation factor 4 gamma 2 (EIF4G2) transcript variant 3 mRNA. // refseq // 11 // --- /// NM_001418 // Homo sapiens eukaryotic translation initiation factor 4 gamm
a 2 (EIF4G2) transcript variant 1 mRNA. // refseq // 11 // --- /// U73824 // Human p97 mRNA complete cds. // gb // 11 // --- /// U76111 // Human translation repressor NAT1 mRNA complete cds. // gb // 10 // ---,---
+200005_at,g4503522,gb:NM_003753.1 /DEF=Homo sapiens eukaryotic translation initiation factor 3 subunit 7 (zeta 6667kD) (EIF3S7) mRNA. /FEA=mRNA /GEN=EIF3S7 /PROD=eukaryotic translation initiation factor 3 subunit 7 (zeta 6667kD) /DB_XREF=gi:4503522 /UG=Hs.55682 eukaryotic translation initiation factor 3 subunit 7 (zeta 6667kD) /FL=gb:BC000328.1 gb:BC000469.1 gb:U54558.1 gb:NM_003753.1,NM_003753,Hs.55682,Hs.55682,chr22:36906902-36925183 (-) // 96.01 // q12.3,eukaryotic translation initiation factor 3 subunit D,EIF3D,chr22q13.1,full length,ENSG00000100353,8664,A8MWD3 /// B0QYA3 /// B0QYA4 /// B0QYA5 /// B0QYA6 /// B0QYA7 /// B0QYA8 /// B4DVY1 /// B4E1K8 /// O15371,---,603915,NP_003744,NM_003753,0001732 // formation of translation initiation complex // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred by curator
/// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement,0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from electronic annotation,0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interac
tion,Translation_Factors // GenMAPP,IPR007783 // Eukaryotic translation initiation factor 3 subunit 7 // 2.8E-215 /// IPR007783 // Eukaryotic translation initiation factor 3 subunit 7 // 2.4E-90 /// IPR007783 // Eukaryotic translation initiation factor 3 subunit 7 // 5.7E-79 /// IPR007783 // Eukaryotic translation initiation factor 3 subunit 7 // 9.9E-214 /// IPR007783 // Eukaryotic translation initiation factor 3 subunit 7 // 2.5E-18 /// IPR007783 // Eukaryotic translation initiation factor 3 subunit 7 // 6.8E-184,AK300199(11) AK301284(11) AK303884(11) BC000328(11) BC000469(11) BC014912(11) BC080515(11) BC093100(11) BC093686(11) BC101477(11) BT007381(11) CR456489(11) ENST00000216190(11) ENST00000397177(11) ENST00000405442(11) ENST00000426531(11) ENST00000458572(9) ENST00000462641(11) ENST00000541106(11) NM_003753(11) U54558(11),AK300199 // Homo sapiens cDNA FLJ53917 complete cds highly similar to Eukaryotic translation initiation factor 3 subunit 7. // gb // 11 // --
- /// AK301284 // Homo sapiens cDNA FLJ51552 complete cds highly similar to Eukaryotic translation initiation factor 3 subunit 7. // gb // 11 // --- /// AK303884 // Homo sapiens cDNA FLJ58383 complete cds highly similar to Eukaryotic translation initiation factor 3 subunit 7. // gb // 11 // --- /// BC000328 // Homo sapiens eukaryotic translation initiation factor 3 subunit D mRNA (cDNA clone MGC:8514 IMAGE:2822380) complete cds. // gb // 11 // --- /// BC000469 // Homo sapiens eukaryotic translation initiation factor 3 subunit D mRNA (cDNA clone MGC:8588 IMAGE:2961048) complete cds. // gb // 11 // --- /// BC014912 // Homo sapiens eukaryotic translation initiation factor 3 subunit D mRNA (cDNA clone MGC:17258 IMAGE:3915705) complete cds. // gb // 11 // --- /// BC071903 // Homo sapiens eukaryotic translation initiation factor 3 subunit 7 zeta 66/67kDa mRNA (cDNA clone IMAGE:6597035) **** WARNING: chimeric clone ****. // gb_htc // 11 // --- /// BC080515 // Homo sa
piens eukaryotic translation initiation factor 3 subunit D mRNA (cDNA clone MGC:99492 IMAGE:2822489) complete cds. // gb // 11 // --- /// BC093100 // Homo sapiens eukaryotic translation initiation factor 3 subunit D mRNA (cDNA clone MGC:111783 IMAGE:6527393) complete cds. // gb // 11 // --- /// BC093686 // Homo sapiens eukaryotic translation initiation factor 3 subunit D mRNA (cDNA clone MGC:120721 IMAGE:7939531) complete cds. // gb // 11 // --- /// BC101477 // Homo sapiens eukaryotic translation initiation factor 3 subunit D mRNA (cDNA clone MGC:126526 IMAGE:8068983) complete cds. // gb // 11 // --- /// BT007381 // Homo sapiens eukaryotic translation initiation factor 3 subunit 7 zeta 66/67kDa mRNA complete cds. // gb // 11 // --- /// CR456489 // Homo sapiens EIF3S7 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.EIF3S7). // gb // 11 // --- /// ENST00000216190 // cdna:known chromosome:GRCh37:22:36906897:36925483:-1 gene:ENSG00000100353
gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000397177 // cdna:known chromosome:GRCh37:22:36906902:36925192:-1 gene:ENSG00000100353 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000405442 // cdna:known chromosome:GRCh37:22:36906946:36924944:-1 gene:ENSG00000100353 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000426531 // cdna:putative chromosome:GRCh37:22:36907624:36912978:-1 gene:ENSG00000100353 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000458572 // cdna:putative chromosome:GRCh37:22:36907748:36915548:-1 gene:ENSG00000100353 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 9 // --- /// ENST00000462641 // cdna:known chromosome:GRCh37:22:36906915:36908976:-1 gene:ENSG00000100353 gene_biotype:protein_coding transcript_biotype:processed_transcript
// ensembl // 11 // --- /// ENST00000541106 // cdna:known chromosome:GRCh37:22:36906904:36925213:-1 gene:ENSG00000100353 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// GENSCAN00000024412 // cdna:genscan chromosome:GRCh37:22:36907034:36933651:-1 transcript_biotype:protein_coding // ensembl // 11 // --- /// NM_003753 // Homo sapiens eukaryotic translation initiation factor 3 subunit D (EIF3D) mRNA. // refseq // 11 // --- /// U54558 // Homo sapiens translation initiation factor eIF3 p66 subunit mRNA complete cds. // gb // 11 // ---,ENST00000478547 // ensembl // 6 // Cross Hyb Matching Probes
+200006_at,g6005748,gb:NM_007262.1 /DEF=Homo sapiens RNA-binding protein regulatory subunit (DJ-1) mRNA. /FEA=mRNA /GEN=DJ-1 /PROD=RNA-binding protein regulatory subunit /DB_XREF=gi:6005748 /UG=Hs.10958 RNA-binding protein regulatory subunit /FL=gb:AF021819.1 gb:NM_007262.1 gb:D61380.1,NM_007262,Hs.10958,Hs.419640,chr1:8022839-8045342 (+) // 95.37 // p36.23,parkinson protein 7,PARK7,chr1p36.23,full length,ENSG00000116288,11315,Q99497,---,602533 /// 606324,NP_001116849 /// NP_009193,NM_001123377 /// NM_007262,0001963 // synaptic transmission dopaminergic // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007005 // mitochondrio
n organization // inferred from sequence or structural similarity /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007338 // single fertilization // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0034599 // cellular response to oxidative stress // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0042743 // hydrogen peroxide metabolic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from direct assay /// 0043526 // neuroprotection // inferred from direct assay /// 0050727 // regulation of inflammatory respo
nse // inferred from sequence or structural similarity /// 0050727 // regulation of inflammatory response // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0050821 // protein stabilization // inferred from electronic annotation /// 0051583 // dopamine uptake involved in synaptic transmission // inferred from electronic annotation /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0060081 // membrane hyperpolarization // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from direct assay /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0060765 // regulation of androgen receptor signaling pathway // inferred from direct assay /// 0070301 // cellular response to hydrogen peroxide // inferred from direct assay /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annota
tion /// 2000277 // positive regulation of oxidative phosphorylation uncoupler activity // inferred from electronic annotation /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype,0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation,0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0004601 // peroxidase activity // inferred from sequence or structural similarity /// 0004601 // peroxidase activity // inferred from electronic annot
ation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0051920 // peroxiredoxin activity // inferred from electronic annotation,---,IPR002818 // ThiJ/PfpI // 2.9E-37,AB073864(9) AF021819(11) AK091679(11) BC008188(11) D61380(11) ENST00000338639(11) ENST00000377488(9) ENST00000377491(11) ENST00000377493(11) ENST00000469225(11) ENST00000493373(9) ENST00000493678(11) NM_001123377(11) NM_007262(11),AB073864 // Homo sapiens mRNA for DJ-1 complete cds. // gb // 9 // --- /// AF021819 // Homo sapiens RNA-binding protein regulatory subunit mRNA complete cds. // gb // 11 // --- /// AK091679 // Homo sapiens cDNA FLJ34360 fis clone FEBRA2014198. // gb // 11 // --- /// BC008188
// Homo sapiens Parkinson disease (autosomal recessive early onset) 7 mRNA (cDNA clone MGC:5243 IMAGE:2901102) complete cds. // gb // 11 // --- /// D61380 // Homo sapiens mRNA for DJ-1 protein complete cds. // gb // 11 // --- /// ENST00000338639 // cdna:known chromosome:GRCh37:1:8021723:8045339:1 gene:ENSG00000116288 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000377488 // cdna:known chromosome:GRCh37:1:8022029:8045171:1 gene:ENSG00000116288 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 9 // --- /// ENST00000377491 // cdna:known chromosome:GRCh37:1:8021954:8045310:1 gene:ENSG00000116288 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000377493 // cdna:known chromosome:GRCh37:1:8021761:8045341:1 gene:ENSG00000116288 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 11 // --- /// ENST00000469225 // cdna:known chro
mosome:GRCh37:1:8025411:8045342:1 gene:ENSG00000116288 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 11 // --- /// ENST00000493373 // cdna:known chromosome:GRCh37:1:8014351:8045112:1 gene:ENSG00000116288 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 9 // --- /// ENST00000493678 // cdna:known chromosome:GRCh37:1:8021752:8045565:1 gene:ENSG00000116288 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// NM_001123377 // Homo sapiens parkinson protein 7 (PARK7) transcript variant 2 mRNA. // refseq // 11 // --- /// NM_007262 // Homo sapiens parkinson protein 7 (PARK7) transcript variant 1 mRNA. // refseq // 11 // ---,GENSCAN00000012447 // ensembl // 7 // Cross Hyb Matching Probes
+200007_at,g4507210,gb:NM_003134.1 /DEF=Homo sapiens signal recognition particle 14kD (homologous Alu RNA-binding protein) (SRP14) mRNA. /FEA=mRNA /GEN=SRP14 /PROD=signal recognition particle 14kD (homologous AluRNA-binding protein) /DB_XREF=gi:4507210 /UG=Hs.180394 signal recognition particle 14kD (homologous Alu RNA-binding protein) /FL=gb:NM_003134.1 gb:U07857.1,NM_003134,Hs.180394,Hs.533732,chr15:40328242-40331336 (-) // 87.93 // q15.1,signal recognition particle 14kDa (homologous Alu RNA binding protein),SRP14,chr15q22,full length,ENSG00000140319,6727,H0YLW0 /// P37108,---,600708,NP_003125,NM_003134,0006412 // translation // traceable author statement /// 0006613 // cotranslational protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // inferred from electronic annotation /// 0010467 /
/ gene expression // traceable author statement /// 0042493 // response to drug // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045047 // protein targeting to ER // inferred from mutant phenotype /// 0045900 // negative regulation of translational elongation // inferred from electronic annotation,0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005786 // signal recognition particle endoplasmic reticulum targeting // inferred from direct assay /// 0005786 // signal recognition particle endoplasmic reticulum targeting // inferred from electronic annotation /// 0005786 // signal recognition particle endoplasmic reticulum targeting // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0048500 // signal recognition particle // inf
erred from electronic annotation,0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0008312 // 7S RNA binding // inferred from electronic annotation /// 0008312 // 7S RNA binding // traceable author statement /// 0030942 // endoplasmic reticulum signal peptide binding // inferred from electronic annotation,---,IPR003210 // Signal recognition particle SRP14 subunit // 1.4E-36,AB061546(11) BC035495(11) BC051006(11) BC071716(11) BC100031(11) ENST00000267884(11) ENST00000558527(11) ENST00000558720(11) ENST00000559439(10) ENST00000559475(9) ENST00000560773(10) NM_003134(11) U07857(11),AB061546 // Homo sapiens SRP14 mRNA for signal recognition particle 14kD complete cds. // gb // 11 // --- /// BC035495 // Homo sapiens signal recognition particle 14kDa (homologous Alu RNA binding protein) mRNA (cDNA clone MGC:14326 IMAGE:4298087) complete cds. // gb // 11 // --- /// BC051006 // Homo sapiens signal recogniti
on particle 14kDa (homologous Alu RNA binding protein) mRNA (cDNA clone IMAGE:4577398) with apparent retained intron. // gb_htc // 11 // --- /// BC052615 // Homo sapiens cDNA clone IMAGE:6295740 **** WARNING: chimeric clone ****. // gb_htc // 11 // --- /// BC071716 // Homo sapiens signal recognition particle 14kDa (homologous Alu RNA binding protein) mRNA (cDNA clone MGC:88011 IMAGE:4476669) complete cds. // gb // 11 // --- /// BC100031 // Homo sapiens signal recognition particle 14kDa (homologous Alu RNA binding protein) mRNA (cDNA clone MGC:111680 IMAGE:2847600) complete cds. // gb // 11 // --- /// ENST00000267884 // cdna:known chromosome:GRCh37:15:40327940:40331389:-1 gene:ENSG00000140319 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000558527 // cdna:known chromosome:GRCh37:15:40328242:40331365:-1 gene:ENSG00000140319 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 11 // --- /// EN
ST00000558720 // cdna:putative chromosome:GRCh37:15:40328243:40331251:-1 gene:ENSG00000140319 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000559439 // cdna:known chromosome:GRCh37:15:40328455:40331074:-1 gene:ENSG00000140319 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 10 // --- /// ENST00000559475 // cdna:known chromosome:GRCh37:15:40328505:40331296:-1 gene:ENSG00000140319 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 9 // --- /// ENST00000560773 // cdna:putative chromosome:GRCh37:15:40328444:40331357:-1 gene:ENSG00000140319 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 10 // --- /// NM_003134 // Homo sapiens signal recognition particle 14kDa (homologous Alu RNA binding protein) (SRP14) mRNA. // refseq // 11 // --- /// U07857 // Human 18 kDa Alu RNA binding protein mRNA complete cds. // gb // 11 // ---,U92988 // gb // 5
// Cross Hyb Matching Probes /// GENSCAN00000001882 // ensembl // 1 // Cross Hyb Matching Probes /// GENSCAN00000008301 // ensembl // 6 // Cross Hyb Matching Probes /// GENSCAN00000029550 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000559081 // ensembl // 5 // Cross Hyb Matching Probes /// ENST00000558243 // ensembl // 5 // Cross Hyb Matching Probes /// ENST00000533701 // ensembl // 2 // Cross Hyb Matching Probes
+200008_s_at,g285974,gb:D13988.1 /DEF=Human rab GDI mRNA complete cds. /FEA=mRNA /PROD=human rab GDI /DB_XREF=gi:285974 /UG=Hs.56845 GDP dissociation inhibitor 2 /FL=gb:BC005145.1 gb:D13988.1 gb:NM_001494.2,NM_001494,Hs.56845,Hs.299055,chr10:5807948-5855215 (-) // 96.95 // p15.1,GDP dissociation inhibitor 2,GDI2,chr10p15,full length,ENSG00000057608,2665,B3KVE3 /// B4DLV7 /// E7EU23 /// E9PFL7 /// P50395 /// Q5SX91 /// Q6IAT1 /// Q8TB95,---,600767,NP_001108628 /// NP_001485,NM_001115156 /// NM_001494,0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction
// traceable author statement,0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation,0005093 // Rab GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0005093 // Rab GDP-dissociation inhibitor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction,---,IPR018203 // GDP dissociation inhibitor // 3.3E-228 /// IPR018203 // GDP dissociation inhibitor // 4.0E-89 /// IPR018203 // GDP dissociation inhibitor // 1.2E-44 /// IPR018203 // GDP disso
ciation inhibitor // 9.4E-157 /// IPR018203 // GDP dissociation inhibitor // 8.1E-218 /// IPR018203 // GDP dissociation inhibitor // 2.1E-91,AB451295(11) AK094671(11) AK122841(10) AK297177(11) AK297554(11) BC005145(11) BT006868(11) CR457073(11) D13988(11) ENST00000380132(11) ENST00000380153(10) ENST00000380181(11) ENST00000380191(11) ENST00000447751(10) ENST00000479928(11) NM_001115156(11) NM_001494(11),AB451295 // Homo sapiens GDI2 mRNA for GDP dissociation inhibitor 2 isoform 1 complete cds clone: FLJ08144AAAN. // gb // 11 // --- /// AK094671 // Homo sapiens cDNA FLJ37352 fis clone BRAMY2021982. // gb // 11 // --- /// AK122841 // Homo sapiens cDNA FLJ16452 fis clone BRAWH3002467 highly similar to RAB GDP DISSOCIATION INHIBITOR BETA. // gb // 10 // --- /// AK297177 // Homo sapiens cDNA FLJ60299 complete cds highly similar to Rab GDP dissociation inhibitor beta. // gb // 11 // --- /// AK297554 // Homo sapiens cDNA FLJ60305 complete cds highly similar to Rab GDP dissoc
iation inhibitor beta. // gb // 11 // --- /// BC005145 // Homo sapiens GDP dissociation inhibitor 2 mRNA (cDNA clone MGC:2027 IMAGE:3504736) complete cds. // gb // 11 // --- /// BT006868 // Homo sapiens GDP dissociation inhibitor 2 mRNA complete cds. // gb // 11 // --- /// CR457073 // Homo sapiens full open reading frame cDNA clone RZPDo834H0511D for gene GDI2 GDP dissociation inhibitor 2; complete cds incl. stopcodon. // gb // 11 // --- /// D13988 // Homo sapiens rab GDI mRNA complete cds. // gb // 11 // --- /// ENST00000380132 // cdna:known chromosome:GRCh37:10:5807884:5855395:-1 gene:ENSG00000057608 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000380153 // cdna:known chromosome:GRCh37:10:5807187:5855512:-1 gene:ENSG00000057608 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 10 // --- /// ENST00000380181 // cdna:known chromosome:GRCh37:10:5807917:5855374:-1 gene:ENSG00000057608 gene_biotyp
e:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000380191 // cdna:known chromosome:GRCh37:10:5807186:5855512:-1 gene:ENSG00000057608 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000447751 // cdna:known chromosome:GRCh37:10:5807812:5827885:-1 gene:ENSG00000057608 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 10 // --- /// ENST00000479928 // cdna:known chromosome:GRCh37:10:5807192:5811352:-1 gene:ENSG00000057608 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 11 // --- /// GENSCAN00000042474 // cdna:genscan chromosome:GRCh37:10:5807969:5940902:-1 transcript_biotype:protein_coding // ensembl // 11 // --- /// NM_001115156 // Homo sapiens GDP dissociation inhibitor 2 (GDI2) transcript variant 2 mRNA. // refseq // 11 // --- /// NM_001494 // Homo sapiens GDP dissociation inhibitor 2 (GDI2) transcript variant 1 mRNA. // refseq //
11 // ---,GENSCAN00000009624 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000028799 // ensembl // 7 // Cross Hyb Matching Probes /// ENST00000445131 // ensembl // 7 // Cross Hyb Matching Probes /// ENST00000429312 // ensembl // 2 // Cross Hyb Matching Probes
+200009_at,g6598322,gb:NM_001494.2 /DEF=Homo sapiens GDP dissociation inhibitor 2 (GDI2) mRNA. /FEA=mRNA /GEN=GDI2 /PROD=GDP dissociation inhibitor 2 /DB_XREF=gi:6598322 /UG=Hs.56845 GDP dissociation inhibitor 2 /FL=gb:BC005145.1 gb:D13988.1 gb:NM_001494.2,NM_001494,Hs.56845,Hs.299055,chr10:5807185-5855373 (-) // 99.34 // p15.1,GDP dissociation inhibitor 2,GDI2,chr10p15,full length,ENSG00000057608,2665,B3KVE3 /// B4DLV7 /// E9PFL7 /// P50395 /// Q6IAT1 /// Q8TB95,---,600767,NP_001108628 /// NP_001485,NM_001115156 /// NM_001494,0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase m
ediated signal transduction // traceable author statement,0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation,0005093 // Rab GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0005093 // Rab GDP-dissociation inhibitor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction,---,IPR018203 // GDP dissociation inhibitor // 3.3E-228 /// IPR018203 // GDP dissociation inhibitor // 2.1E-91,AK094671(11) AK122841(10) BC005145(11) ENST0000038015
3(11) ENST00000380191(11) ENST00000479928(11) NM_001115156(11) NM_001494(11),AK094671 // Homo sapiens cDNA FLJ37352 fis clone BRAMY2021982. // gb // 11 // --- /// AK122841 // Homo sapiens cDNA FLJ16452 fis clone BRAWH3002467 highly similar to RAB GDP DISSOCIATION INHIBITOR BETA. // gb // 10 // --- /// BC005145 // Homo sapiens GDP dissociation inhibitor 2 mRNA (cDNA clone MGC:2027 IMAGE:3504736) complete cds. // gb // 11 // --- /// ENST00000380153 // cdna:known chromosome:GRCh37:10:5807187:5855512:-1 gene:ENSG00000057608 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000380191 // cdna:known chromosome:GRCh37:10:5807186:5855512:-1 gene:ENSG00000057608 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000479928 // cdna:known chromosome:GRCh37:10:5807192:5811352:-1 gene:ENSG00000057608 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 11 // --- ///
NM_001115156 // Homo sapiens GDP dissociation inhibitor 2 (GDI2) transcript variant 2 mRNA. // refseq // 11 // --- /// NM_001494 // Homo sapiens GDP dissociation inhibitor 2 (GDI2) transcript variant 1 mRNA. // refseq // 11 // ---,AK297554 // gb // 2 // Cross Hyb Matching Probes
+200010_at,g4506594,gb:NM_000975.1 /DEF=Homo sapiens ribosomal protein L11 (RPL11) mRNA. /FEA=mRNA /GEN=RPL11 /PROD=ribosomal protein L11 /DB_XREF=gi:4506594 /UG=Hs.179943 ribosomal protein L11 /FL=gb:L05092.1 gb:NM_000975.1,NM_000975,Hs.179943,Hs.719951,chr1:24019097-24022913 (+) // 97.29 // p36.11,ribosomal protein L11,RPL11,chr1p36.1-p35,full length,ENSG00000142676,6135,P62913 /// Q08ES8 /// Q5VVC8 /// Q5VVC9 /// Q5VVD0,---,604175 /// 612562,NP_000966 /// NP_001186731,NM_000975 /// NM_001199802,0000184 // nuclear-transcribed mRNA catabolic process nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred from electronic annotation /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable autho
r statement /// 0006415 // translational termination // traceable author statement /// 0006605 // protein targeting // inferred from mutant phenotype /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0034504 // protein localization to nucleus // inferred from sequence or structural similarity /// 0042273 // ribosomal large subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement,0005622 // intracellular // inferred from electronic annotation /// 0005634 //
nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation,0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019843 // rRNA binding
// inferred from electronic annotation,Ribosomal_Proteins // GenMAPP /// Ribosomal_Proteins // GenMAPP,IPR002132 // Ribosomal protein L5 // 8.0E-27 /// IPR002132 // Ribosomal protein L5 // 3.4E-23 /// IPR002132 // Ribosomal protein L5 // 7.1E-25 /// IPR002132 // Ribosomal protein L5 // 1.8E-23 /// IPR002132 // Ribosomal protein L5 // 7.5E-27 /// IPR002132 // Ribosomal protein L5 // 3.3E-23,BC018970(9) ENST00000374550(9) ENST00000443624(11) ENST00000458455(11) ENST00000482370(9) L05092(9) NM_000975(9) NM_001199802(9),AK225425 // Homo sapiens mRNA for Growth/differentiation factor 15 precursor variant clone: HRC10120. // gb // 9 // --- /// BC018970 // Homo sapiens ribosomal protein L11 mRNA (cDNA clone MGC:19586 IMAGE:4337066) complete cds. // gb // 9 // --- /// ENST00000374550 // cdna:known chromosome:GRCh37:1:24018269:24022915:1 gene:ENSG00000142676 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 9 // --- /// ENST00000443624 // cdna:known chrom
osome:GRCh37:1:24019099:24021885:1 gene:ENSG00000142676 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000458455 // cdna:known chromosome:GRCh37:1:24019099:24022618:1 gene:ENSG00000142676 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000482370 // cdna:known chromosome:GRCh37:1:24018796:24022908:1 gene:ENSG00000142676 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 9 // --- /// GENSCAN00000021323 // cdna:genscan chromosome:GRCh37:1:23979038:24037721:1 transcript_biotype:protein_coding // ensembl // 9 // --- /// L05092 // Homo sapiens ribosomal protein L11 mRNA complete cds. // gb // 9 // --- /// NM_000975 // Homo sapiens ribosomal protein L11 (RPL11) transcript variant 1 mRNA. // refseq // 9 // --- /// NM_001199802 // Homo sapiens ribosomal protein L11 (RPL11) transcript variant 2 mRNA. // refseq // 9 // ---,AY871274 // gb // 8 // Cross Hyb
Matching Probes /// GENSCAN00000045998 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000467075 // ensembl // 8 // Cross Hyb Matching Probes /// ENST00000498453 // ensembl // 2 // Cross Hyb Matching Probes
+200011_s_at,g4502202,gb:NM_001659.1 /DEF=Homo sapiens ADP-ribosylation factor 3 (ARF3) mRNA. /FEA=mRNA /GEN=ARF3 /PROD=ADP-ribosylation factor 3 /DB_XREF=gi:4502202 /UG=Hs.119177 ADP-ribosylation factor 3 /FL=gb:M74491.1 gb:NM_001659.1,NM_001659,Hs.119177,Hs.119177,chr12:49329991-49351310 (-) // 98.47 // q13.12,ADP-ribosylation factor 3,ARF3,chr12q13,full length,ENSG00000134287,377,B4DT71 /// B4E190 /// B7Z9K5 /// B7ZB63 /// F5H0C7 /// F5H1V1 /// F5H423 /// F5H6T5 /// P61204,---,103190,NP_001650,NM_001659,0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation,0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred
from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation,0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement,---,IPR001019 // Guanine nucleotide binding protein (G-protein) alpha subunit // 6.0E-12 /// IPR001806 // Small GTPase superfamily // 1.2E-16 /// IPR006689 // Small GTPase superfamily ARF/SAR type // 2.6E-82 /// IPR006762 // Gtr1/RagA G protein // 7.4E-15 /// IPR013684 // Mitochondrial Rho-like // 1.5E-12 /// IPR019009 // Signal recognition particle receptor beta subunit // 2.6E-18,BC007647(11) BC017565(11) BC028402(11) ENST00000256682(11) M74491(11) NM_001659(11),BC007647 // Homo sapiens ADP-ribosylation factor 3 mRNA (cDNA clone MGC:15946 IM
AGE:3537965) complete cds. // gb // 11 // --- /// BC017565 // Homo sapiens ADP-ribosylation factor 3 mRNA (cDNA clone MGC:1802 IMAGE:2967578) complete cds. // gb // 11 // --- /// BC028402 // Homo sapiens ADP-ribosylation factor 3 mRNA (cDNA clone MGC:33515 IMAGE:4817874) complete cds. // gb // 11 // --- /// ENST00000256682 // cdna:known chromosome:GRCh37:12:49329506:49351334:-1 gene:ENSG00000134287 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// M74491 // Human ADP-ribosylation factor 3 mRNA complete cds. // gb // 11 // --- /// NM_001659 // Homo sapiens ADP-ribosylation factor 3 (ARF3) mRNA. // refseq // 11 // ---,XR_132991 // refseq // 11 // Negative Strand Matching Probes
+200012_x_at,g4506610,gb:NM_000982.1 /DEF=Homo sapiens ribosomal protein L21 (gene or pseudogene) (RPL21) mRNA. /FEA=mRNA /GEN=RPL21 /PROD=ribosomal protein L21 (gene or pseudogene) /DB_XREF=gi:4506610 /UG=Hs.184108 ribosomal protein L21 /FL=gb:BC001603.1 gb:NM_000982.1 gb:U14967.1 gb:U25789.1,NM_000982,Hs.184108,Hs.381123,chr11:9681951-9682503 (+) // 95.37 // p15.4 /// chr12:77054151-77054708 (+) // 93.06 // q21.2 /// chr13:27827898-27830700 (+) // 93.95 // q12.2 /// chr17:3568480-3569034 (+) // 94.66 // p13.2 /// chr7:20042354-20042909 (+) // 97.15 // p21.1 /// chr1:212224827-212225381 (-) // 88.61 // q32.3 /// chr10:122114174-122114728 (-) // 97.33 // q26.12 /// chr10:29187891-29188446 (-) // 95.2 // p12.1 /// chr14:90832996-90833556 (-) // 92.88 // q32.11 /// chr16:9250216-9250771 (-) // 96.44 // p13.2 /// chr3:145538996-145542559 (-) // 94.84 // q24 /// chr4:128733833-128734388 (-) // 93.06 // q28.1,ribosomal protein L21 /// ribosomal protein L21 pseudogene 28 /// smal
l nucleolar RNA H/ACA box 27 /// small nucleolar RNA C/D box 102,RPL21 /// RPL21P28 /// SNORA27 /// SNORD102,chr13q12.2 /// chr1q32.3,full length,ENSG00000122026 /// ENSG00000213860 /// ENSG00000220749 /// ENSG00000220793 /// ENSG00000220842 /// ENSG00000229605 /// ENSG00000239470 /// ENSG00000244021,100131205 /// 26771 /// 6144 /// 619499,G3V1B3 /// P46778 /// Q6IAX2,EC:3.6.5.3,603636,NP_000973,NM_000982 /// NR_002574 /// NR_002575 /// NR_026911,0000184 // nuclear-transcribed mRNA catabolic process nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cot
ranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement,0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation,0003723 // RNA binding //
traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement,Ribosomal_Proteins // GenMAPP,IPR001147 // Ribosomal protein L21e // 4.4E-51 /// IPR001147 // Ribosomal protein L21e // 1.2E-42,AF086172(11) BC001603(11) BC007505(11) BC062981(11) BC070184(11) BC070323(11) BC070330(11) BC071902(11) BC104667(11) BX647669(11) CR457032(11) U14967(10) U25789(11) GENSCAN00000004089(11) GENSCAN00000011699(11) GENSCAN00000014150(11) GENSCAN00000020588(11) GENSCAN00000025058(11) GENSCAN00000031766(11) GENSCAN00000035485(10) ENST00000311549(11) ENST00000461690(11) ENST00000272274(11) ENST00000319826(11) ENST00000326092(11) ENST00000493317(9) ENST00000483765(11) ENST00000485756(10) ENST00000401418(9) ENST00000327274(10) ENST00000472300(11) ENST00000540439(11) ENST00000484462(
11) ENST00000403916(11) ENST00000495531(11) ENST00000536557(11) ENST00000480465(11) ENST00000395291(11) ENST00000491435(10) ENST00000396599(11) ENST00000398581(11) NM_000982(11) NR_026911(10),AF086172 // Homo sapiens full length insert cDNA clone ZB89E10. // gb // 11 // --- /// BC001603 // Homo sapiens ribosomal protein L21 mRNA (cDNA clone MGC:2150 IMAGE:3543702) complete cds. // gb // 11 // --- /// BC007505 // Homo sapiens ribosomal protein L21 mRNA (cDNA clone MGC:4136 IMAGE:2964441) complete cds. // gb // 11 // --- /// BC062981 // Homo sapiens ribosomal protein L21 mRNA (cDNA clone MGC:71252 IMAGE:6084268) complete cds. // gb // 11 // --- /// BC070184 // Homo sapiens ribosomal protein L21 mRNA (cDNA clone MGC:88165 IMAGE:4281405) complete cds. // gb // 11 // --- /// BC070323 // Homo sapiens ribosomal protein L21 mRNA (cDNA clone MGC:88326 IMAGE:4248655) complete cds. // gb // 11 // --- /// BC070330 // Homo sapiens ribosomal protein L21 mRNA (cDNA clone MGC:883
34 IMAGE:3931616) complete cds. // gb // 11 // --- /// BC071902 // Homo sapiens ribosomal protein L21 mRNA (cDNA clone MGC:88581 IMAGE:4901492) complete cds. // gb // 11 // --- /// BC104667 // Homo sapiens ribosomal protein L21 mRNA (cDNA clone MGC:104275 IMAGE:6724053) complete cds. // gb // 11 // --- /// BX647669 // Homo sapiens mRNA; cDNA DKFZp686C06101 (from clone DKFZp686C06101). // gb // 11 // --- /// CR457032 // Homo sapiens full open reading frame cDNA clone RZPDo834D0315D for gene RPL21 ribosomal protein L21; complete cds incl. stopcodon. // gb // 11 // --- /// ENST00000272274 // cdna:known chromosome:GRCh37:13:27825716:27830705:1 gene:ENSG00000122026 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000311549 // cdna:known chromosome:GRCh37:13:27825446:27830705:1 gene:ENSG00000122026 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000319826 // cdna:known chromosome:
GRCh37:13:27825720:27830705:1 gene:ENSG00000122026 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000326092 // cdna:known chromosome:GRCh37:13:27825734:27830705:1 gene:ENSG00000122026 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000327274 // cdna:pseudogene chromosome:GRCh37:1:212224829:212225371:-1 gene:ENSG00000220749 gene_biotype:pseudogene transcript_biotype:processed_pseudogene // ensembl // 10 // --- /// ENST00000395291 // cdna:pseudogene chromosome:GRCh37:10:29187931:29188422:-1 gene:ENSG00000229605 gene_biotype:pseudogene transcript_biotype:processed_pseudogene // ensembl // 11 // --- /// ENST00000396599 // cdna:pseudogene chromosome:GRCh37:7:20042388:20042870:1 gene:ENSG00000213860 gene_biotype:pseudogene transcript_biotype:processed_pseudogene // ensembl // 11 // --- /// ENST00000398581 // cdna:pseudogene chromosome:GRCh37:7:20042346:20042909:1 gene:ENSG00000213860 g
ene_biotype:pseudogene transcript_biotype:processed_pseudogene // ensembl // 11 // --- /// ENST00000401418 // cdna:pseudogene chromosome:GRCh37:1:212224866:212225348:-1 gene:ENSG00000220749 gene_biotype:pseudogene transcript_biotype:processed_pseudogene // ensembl // 9 // --- /// ENST00000403916 // cdna:pseudogene chromosome:GRCh37:16:9250219:9250761:-1 gene:ENSG00000220793 gene_biotype:pseudogene transcript_biotype:processed_pseudogene // ensembl // 11 // --- /// ENST00000461690 // cdna:known chromosome:GRCh37:13:27825698:27830828:1 gene:ENSG00000122026 gene_biotype:protein_coding transcript_biotype:nonsense_mediated_decay // ensembl // 11 // --- /// ENST00000472300 // cdna:pseudogene chromosome:GRCh37:11:9681985:9682467:1 gene:ENSG00000239470 gene_biotype:pseudogene transcript_biotype:processed_pseudogene // ensembl // 11 // --- /// ENST00000480465 // cdna:pseudogene chromosome:GRCh37:10:29187925:29188413:-1 gene:ENSG00000229605 gene_biotype:pseudogene transcript_biotype:p
rocessed_pseudogene // ensembl // 11 // --- /// ENST00000483765 // cdna:known chromosome:GRCh37:13:27827902:27830682:1 gene:ENSG00000122026 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 11 // --- /// ENST00000484462 // cdna:pseudogene chromosome:GRCh37:16:9250259:9250738:-1 gene:ENSG00000220793 gene_biotype:pseudogene transcript_biotype:processed_pseudogene // ensembl // 11 // --- /// ENST00000485756 // cdna:known chromosome:GRCh37:13:27829081:27830685:1 gene:ENSG00000122026 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 10 // --- /// ENST00000491435 // cdna:pseudogene chromosome:GRCh37:4:128733875:128734355:-1 gene:ENSG00000244021 gene_biotype:pseudogene transcript_biotype:processed_pseudogene // ensembl // 10 // --- /// ENST00000493317 // cdna:known chromosome:GRCh37:13:27827842:27830444:1 gene:ENSG00000122026 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 9 // --- ///
ENST00000495531 // cdna:pseudogene chromosome:GRCh37:10:122114213:122114695:-1 gene:ENSG00000220842 gene_biotype:pseudogene transcript_biotype:processed_pseudogene // ensembl // 11 // --- /// ENST00000536557 // cdna:pseudogene chromosome:GRCh37:10:122114177:122114718:-1 gene:ENSG00000220842 gene_biotype:pseudogene transcript_biotype:processed_pseudogene // ensembl // 11 // --- /// ENST00000540439 // cdna:pseudogene chromosome:GRCh37:11:9681946:9682503:1 gene:ENSG00000239470 gene_biotype:pseudogene transcript_biotype:processed_pseudogene // ensembl // 11 // --- /// GENSCAN00000004089 // cdna:genscan chromosome:GRCh37:10:29187931:29208125:-1 transcript_biotype:protein_coding // ensembl // 11 // --- /// GENSCAN00000011699 // cdna:genscan chromosome:GRCh37:11:9681985:9682467:1 transcript_biotype:protein_coding // ensembl // 11 // --- /// GENSCAN00000014150 // cdna:genscan chromosome:GRCh37:13:27827914:27830662:1 transcript_biotype:protein_coding // ensembl // 11 // --- /// GENS
CAN00000020588 // cdna:genscan chromosome:GRCh37:7:20042388:20042870:1 transcript_biotype:protein_coding // ensembl // 11 // --- /// GENSCAN00000025058 // cdna:genscan chromosome:GRCh37:16:9250256:9250738:-1 transcript_biotype:protein_coding // ensembl // 11 // --- /// GENSCAN00000031766 // cdna:genscan chromosome:GRCh37:10:122114213:122114695:-1 transcript_biotype:protein_coding // ensembl // 11 // --- /// GENSCAN00000035485 // cdna:genscan chromosome:GRCh37:4:128733873:128734355:-1 transcript_biotype:protein_coding // ensembl // 10 // --- /// NM_000982 // Homo sapiens ribosomal protein L21 (RPL21) mRNA. // refseq // 11 // --- /// NR_026911 // Homo sapiens ribosomal protein L21 pseudogene 28 (RPL21P28) non-coding RNA. // refseq // 10 // --- /// U14967 // Human ribosomal protein L21 mRNA complete cds. // gb // 10 // --- /// U25789 // Human ribosomal protein L21 mRNA complete cds. // gb // 11 // ---,AB209100 // gb // 8 // Cross Hyb Matching Probes /// D28406 // gb // 2 //
Cross Hyb Matching Probes /// L25348 // gb // 2 // Cross Hyb Matching Probes /// GENSCAN00000000123 // ensembl // 3 // Cross Hyb Matching Probes /// GENSCAN00000001917 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000003401 // ensembl // 3 // Cross Hyb Matching Probes /// GENSCAN00000005879 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000006984 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000008116 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000009482 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000009978 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000010348 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000010548 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000014785 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000017471 // ensembl // 8 // Cross Hyb Matching Probes /// GENSCAN00000022327 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000022677 // e
nsembl // 4 // Cross Hyb Matching Probes /// GENSCAN00000022767 // ensembl // 3 // Cross Hyb Matching Probes /// GENSCAN00000023762 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000024856 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000026363 // ensembl // 4 // Cross Hyb Matching Probes /// GENSCAN00000027635 // ensembl // 7 // Cross Hyb Matching Probes /// GENSCAN00000036108 // ensembl // 4 // Cross Hyb Matching Probes /// GENSCAN00000038219 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000048931 // ensembl // 3 // Cross Hyb Matching Probes /// ENST00000473558 // ensembl // 5 // Cross Hyb Matching Probes /// ENST00000466550 // ensembl // 7 // Cross Hyb Matching Probes /// ENST00000403842 // ensembl // 8 // Cross Hyb Matching Probes /// ENST00000491732 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000469924 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000497298 // ensembl // 4 // Cross Hyb Matching Probes /// ENST000005
68122 // ensembl // 5 // Cross Hyb Matching Probes /// ENST00000576404 // ensembl // 3 // Cross Hyb Matching Probes /// ENST00000437709 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000456484 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000485147 // ensembl // 7 // Cross Hyb Matching Probes /// ENST00000423231 // ensembl // 3 // Cross Hyb Matching Probes /// ENST00000398929 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000482905 // ensembl // 5 // Cross Hyb Matching Probes /// ENST00000493028 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000497954 // ensembl // 6 // Cross Hyb Matching Probes /// ENST00000441274 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000469899 // ensembl // 3 // Cross Hyb Matching Probes /// ENST00000485945 // ensembl // 5 // Cross Hyb Matching Probes /// ENST00000496249 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000399532 // ensembl // 7 // Cross Hyb Matching Probes /// ENST00000463605 // ensem
bl // 6 // Cross Hyb Matching Probes /// ENST00000488408 // ensembl // 3 // Cross Hyb Matching Probes /// ENST00000406094 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000402666 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000416102 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000419877 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000494303 // ensembl // 6 // Cross Hyb Matching Probes /// ENST00000402896 // ensembl // 6 // Cross Hyb Matching Probes /// ENST00000426566 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000471411 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000480369 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000510061 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000488305 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000567196 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000488289 // ensembl // 6 // Cross Hyb Matching Probes /// ENST00000465295 // ensembl // 4 // Cro
ss Hyb Matching Probes /// ENST00000467293 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000463506 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000472975 // ensembl // 3 // Cross Hyb Matching Probes /// ENST00000554662 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000422509 // ensembl // 6 // Cross Hyb Matching Probes /// ENST00000479116 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000556149 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000477341 // ensembl // 8 // Cross Hyb Matching Probes /// ENST00000439177 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000430569 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000493466 // ensembl // 5 // Cross Hyb Matching Probes /// ENST00000463521 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000471393 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000440049 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000404609 // ensembl // 2 // Cross Hyb Matchin
g Probes /// ENST00000486904 // ensembl // 3 // Cross Hyb Matching Probes /// ENST00000395517 // ensembl // 5 // Cross Hyb Matching Probes /// ENST00000557463 // ensembl // 5 // Cross Hyb Matching Probes /// ENST00000465083 // ensembl // 5 // Cross Hyb Matching Probes /// ENST00000454107 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000456604 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000482506 // ensembl // 6 // Cross Hyb Matching Probes /// ENST00000491826 // ensembl // 3 // Cross Hyb Matching Probes /// ENST00000433345 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000418453 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000496412 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000461458 // ensembl // 7 // Cross Hyb Matching Probes /// ENST00000411449 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000483696 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000497178 // ensembl // 2 // Cross Hyb Matching Probes /// E
NST00000479921 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000563948 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000433468 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000418441 // ensembl // 7 // Cross Hyb Matching Probes /// ENST00000397467 // ensembl // 3 // Cross Hyb Matching Probes /// ENST00000468416 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000428586 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000434678 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000415692 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000442539 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000439130 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000453468 // ensembl // 6 // Cross Hyb Matching Probes /// ENST00000422570 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000473808 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000524271 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000460608
// ensembl // 2 // Cross Hyb Matching Probes /// ENST00000327215 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000427200 // ensembl // 3 // Cross Hyb Matching Probes /// ENST00000417077 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000407436 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000402485 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000444831 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000454675 // ensembl // 6 // Cross Hyb Matching Probes /// ENST00000493462 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000472093 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000486753 // ensembl // 2 // Cross Hyb Matching Probes /// AY320407 // gb_htc // 8 // Cross Hyb Matching Probes /// NR_027153 // refseq // 3 // Cross Hyb Matching Probes
+200013_at,g4506618,gb:NM_000986.1 /DEF=Homo sapiens ribosomal protein L24 (RPL24) mRNA. /FEA=mRNA /GEN=RPL24 /PROD=ribosomal protein L24 /DB_XREF=gi:4506618 /UG=Hs.184582 ribosomal protein L24 /FL=gb:BC000690.1 gb:M94314.1 gb:NM_000986.1,NM_000986,Hs.184582,Hs.477028,chr9:72832075-72832622 (+) // 95.14 // q21.12 /// chr3:101399935-101405559 (-) // 99.82 // q12.3,ribosomal protein L24,RPL24,chr3q12,full length,ENSG00000114391 /// ENSG00000181524,6152,C9JNW5 /// C9JXB8 /// P83731,---,604180,NP_000977,NM_000986,0000184 // nuclear-transcribed mRNA catabolic process nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotrans
lational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement,0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation,0003723 /
/ RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement,Ribosomal_Proteins // GenMAPP,IPR000988 // Ribosomal protein L24e-related // 1.4E-40 /// IPR000988 // Ribosomal protein L24e-related // 6.9E-41 /// IPR000988 // Ribosomal protein L24e-related // 1.2E-40,BC000690(11) BC070193(11) CR456729(10) ENST00000394077(11) ENST00000464595(11) ENST00000469605(11) ENST00000488288(10) ENST00000495401(11) M94314(11) NM_000986(11),BC000690 // Homo sapiens ribosomal protein L24 mRNA (cDNA clone MGC:2240 IMAGE:3349215) complete cds. // gb // 11 // --- /// BC070193 // Homo sapiens ribosomal protein L24 mRNA (cDNA clone MGC:88174 IMAGE:6733162) complete cds. // gb // 11 // --- /// CR456729 // Homo sapiens full open reading frame cDNA clone RZPDo834E0
36D for gene RPL24 ribosomal protein L24; complete cds incl. stopcodon. // gb // 10 // --- /// ENST00000326586 // cdna:pseudogene chromosome:GRCh37:6:42924083:42924503:-1 gene:ENSG00000181524 gene_biotype:pseudogene transcript_biotype:processed_pseudogene // ensembl // 11 // --- /// ENST00000394077 // cdna:known chromosome:GRCh37:3:101399936:101405626:-1 gene:ENSG00000114391 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000464595 // cdna:known chromosome:GRCh37:3:101399935:101405556:-1 gene:ENSG00000114391 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 11 // --- /// ENST00000469605 // cdna:putative chromosome:GRCh37:3:101400886:101405539:-1 gene:ENSG00000114391 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000488288 // cdna:known chromosome:GRCh37:3:101399967:101404733:-1 gene:ENSG00000114391 gene_biotype:protein_coding transcript_biotype:retain
ed_intron // ensembl // 10 // --- /// ENST00000495401 // cdna:putative chromosome:GRCh37:3:101399940:101405549:-1 gene:ENSG00000114391 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// GENSCAN00000043783 // cdna:genscan chromosome:GRCh37:3:101370010:101405520:-1 transcript_biotype:protein_coding // ensembl // 9 // --- /// M94314 // Homo sapiens ribosomal protein L30 mRNA complete cds. // gb // 11 // --- /// NM_000986 // Homo sapiens ribosomal protein L24 (RPL24) mRNA. // refseq // 11 // ---,TCONS_l2_00019084-XLOC_l2_010061 // broad-tucp // 2 // Cross Hyb Matching Probes /// AK122630 // gb // 4 // Cross Hyb Matching Probes /// BX538309 // gb // 7 // Cross Hyb Matching Probes /// D28400 // gb // 2 // Cross Hyb Matching Probes /// GENSCAN00000031100 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000470961 // ensembl // 7 // Cross Hyb Matching Probes /// ENST00000421023 // ensembl // 4 // Cross Hyb Matching Probes /// ENST0000044
6071 // ensembl // 6 // Cross Hyb Matching Probes /// ENST00000399435 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000454858 // ensembl // 2 // Cross Hyb Matching Probes
+200014_s_at,g4758543,gb:NM_004500.1 /DEF=Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1C2) (HNRPC) mRNA. /FEA=mRNA /GEN=HNRPC /PROD=heterogeneous nuclear ribonucleoprotein C(C1C2) /DB_XREF=gi:4758543 /UG=Hs.182447 heterogeneous nuclear ribonucleoprotein C (C1C2) /FL=gb:BC003394.1 gb:M16342.1 gb:NM_004500.1,NM_004500,Hs.182447,Hs.508848,chr14:21678714-21737507 (-) // 98.86 // q11.2,heterogeneous nuclear ribonucleoprotein C (C1/C2) /// uncharacterized LOC100652761 /// uncharacterized LOC100653343,HNRNPC /// LOC100652761 /// LOC100653343,chr14q11.2,full length,ENSG00000092199,100652761 /// 100653343 /// 3183,A8K9A4 /// B2R5W2 /// B2R603 /// B3KX96 /// B4DMJ1 /// B4DQQ2 /// B4DSU6 /// B4DY08 /// G3V251 /// G3V2D6 /// G3V2H6 /// G3V2Q1 /// G3V3K6 /// G3V4C1 /// G3V4M8 /// G3V4W0 /// G3V555 /// G3V575 /// G3V576 /// G3V5V7 /// G3V5X6 /// G8JL89 /// P07910 /// Q569J8,---,164020,NP_001070910 /// NP_001070911 /// NP_004491 /// NP_112604,NM_001077442 /// NM_001077443 ///
NM_004500 /// NM_031314 /// XR_132756 /// XR_133037,0000398 // nuclear mRNA splicing via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement,0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0045120 // pronucleus // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay,0000166 // nucleotide binding // inferred from e
lectronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction,mRNA_processing_Reactome // GenMAPP,IPR000504 // RNA recognition motif domain // 5.7E-17 /// IPR000504 // RNA recognition motif domain // 5.9E-17 /// IPR000504 // RNA recognition motif domain // 3.9E-17 /// IPR000504 // RNA recognition motif domain // 6.3E-17,AK126950(11) AK302213(11) BC003394(11) BC066932(11) BC092433(11) BC103758(11) M16342(11) ENST00000336053(11) ENST00000554969(11) ENST00000556142(11) ENST00000554455(11) ENST00000430246(11) ENST00000553753(11) ENST00000555914(11) ENST00000555309(11) ENST00000320084(11) ENST00000449098(11) EN
ST00000400042(11) NM_031314(11) NM_004500(11) NM_001077442(11) NM_001077443(11),AK126950 // Homo sapiens cDNA FLJ45003 fis clone BRAWH3011623 highly similar to Heterogeneous nuclear ribonucleoproteins C. // gb // 11 // --- /// AK302213 // Homo sapiens cDNA FLJ53542 complete cds highly similar to Heterogeneous nuclear ribonucleoproteins C. // gb // 11 // --- /// BC003394 // Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2) mRNA (cDNA clone MGC:5418 IMAGE:3447724) complete cds. // gb // 11 // --- /// BC066932 // Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2) mRNA (cDNA clone MGC:87239 IMAGE:4375450) complete cds. // gb // 11 // --- /// BC092433 // Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2) mRNA (cDNA clone IMAGE:30374039) complete cds. // gb // 11 // --- /// BC103758 // Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2) mRNA (cDNA clone MGC:117353 IMAGE:6187512) complete cds. // gb // 11 // --- /// ENST000
00320084 // cdna:known chromosome:GRCh37:14:21677295:21737638:-1 gene:ENSG00000092199 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000336053 // cdna:putative chromosome:GRCh37:14:21677295:21737653:-1 gene:ENSG00000092199 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000400042 // cdna:known chromosome:GRCh37:14:21678727:21737586:-1 gene:ENSG00000092199 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000430246 // cdna:known chromosome:GRCh37:14:21678715:21733675:-1 gene:ENSG00000092199 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000449098 // cdna:known chromosome:GRCh37:14:21677295:21737638:-1 gene:ENSG00000092199 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000553753 // cdna:putative chromosome:GRCh37:14:21678741:21737562:-1 gen
e:ENSG00000092199 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000554455 // cdna:known chromosome:GRCh37:14:21678709:21737584:-1 gene:ENSG00000092199 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000554969 // cdna:known chromosome:GRCh37:14:21678693:21737584:-1 gene:ENSG00000092199 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000555309 // cdna:novel chromosome:GRCh37:14:21678772:21737580:-1 gene:ENSG00000092199 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000555914 // cdna:novel chromosome:GRCh37:14:21678772:21737563:-1 gene:ENSG00000092199 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000556142 // cdna:putative chromosome:GRCh37:14:21678705:21737582:-1 gene:ENSG00000092199 gene_biotype:protein_coding transcript_biotype:protei
n_coding // ensembl // 11 // --- /// M16342 // Human nuclear ribonucleoprotein particle (hnRNP) C protein mRNA complete cds. // gb // 11 // --- /// NM_001077442 // Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2) (HNRNPC) transcript variant 3 mRNA. // refseq // 11 // --- /// NM_001077443 // Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2) (HNRNPC) transcript variant 4 mRNA. // refseq // 11 // --- /// NM_004500 // Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2) (HNRNPC) transcript variant 2 mRNA. // refseq // 11 // --- /// NM_031314 // Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2) (HNRNPC) transcript variant 1 mRNA. // refseq // 11 // ---,---
+200015_s_at,g4758157,gb:NM_004404.1 /DEF=Homo sapiens neural precursor cell expressed developmentally down-regulated 5 (NEDD5) mRNA. /FEA=mRNA /GEN=NEDD5 /PROD=neural precursor cell expressed developmentallydown-regulated 5 /DB_XREF=gi:4758157 /UG=Hs.155595 neural precursor cell expressed developmentally down-regulated 5 /FL=gb:D28540.1 gb:NM_004404.1 gb:D63878.1,AI191427,Hs.155595,Hs.721234,chr2:242254784-242293439 (+) // 99.91 // q37.3,septin 2,2-Sep,chr2q37,full length,ENSG00000168385,4735,B5MCX3 /// Q15019,---,601506,NP_001008491 /// NP_001008492 /// NP_004395 /// NP_006146,NM_001008491 /// NM_001008492 /// NM_004404 /// NM_006155,0002036 // regulation of L-glutamate transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from sequence or structural similarity /// 0007224 // smoothened signali
ng pathway // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from sequence or structural similarity /// 0042384 // cilium assembly // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation,0000145 // exocyst // inferred from electronic annotation /// 0000775 // chromosome centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from dir
ect assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from sequence or structural similarity /// 0005938 // cell cortex // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0042995 // cell projection // inferred from electron
ic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0060170 // cilium membrane // inferred from sequence or structural similarity /// 0060170 // cilium membrane // inferred from electronic annotation,0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0030234 // enzyme regulator activity // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from electronic annotation,---,IPR000038 // Cell division protein GTP binding // 1.1E-131 /// IPR000038 // Cell division protein GTP binding // 7.6E-128 /// IPR000038 // Cell division protein GTP binding // 1.5E-131,AF038404(11) D28540(11) ENST00000360051(11) ENST00000391971(11) ENST00000391972(11) ENST00000391973(11) ENST00000402092(11) ENST00000407971(11) NM_001008491(11) NM_001008492(11) NM_0044
04(11) NM_006155(11),AF038404 // Homo sapiens homolog of Nedd5 (hNedd5) mRNA complete cds. // gb // 11 // --- /// D28540 // Homo sapiens mRNA for Diff6 H5 CDC10 homologue complete cds. // gb // 11 // --- /// ENST00000360051 // cdna:known chromosome:GRCh37:2:242254704:242293439:1 gene:ENSG00000168385 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000391971 // cdna:known chromosome:GRCh37:2:242255276:242293442:1 gene:ENSG00000168385 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000391972 // cdna:known chromosome:GRCh37:2:242255883:242293439:1 gene:ENSG00000168385 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000391973 // cdna:known chromosome:GRCh37:2:242254515:242293439:1 gene:ENSG00000168385 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000402092 // cdna:known chromosome:GRCh
37:2:242255343:242293442:1 gene:ENSG00000168385 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000407971 // cdna:putative chromosome:GRCh37:2:242255298:242293442:1 gene:ENSG00000168385 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// NM_001008491 // Homo sapiens septin 2 (SEPT2) transcript variant 1 mRNA. // refseq // 11 // --- /// NM_001008492 // Homo sapiens septin 2 (SEPT2) transcript variant 3 mRNA. // refseq // 11 // --- /// NM_004404 // Homo sapiens septin 2 (SEPT2) transcript variant 4 mRNA. // refseq // 11 // --- /// NM_006155 // Homo sapiens septin 2 (SEPT2) transcript variant 2 mRNA. // refseq // 11 // ---,---
+200016_x_at,g4504444,gb:NM_002136.1 /DEF=Homo sapiens heterogeneous nuclear ribonucleoprotein A1 (HNRPA1) mRNA. /FEA=mRNA /GEN=HNRPA1 /PROD=heterogeneous nuclear ribonucleoprotein A1 /DB_XREF=gi:4504444 /UG=Hs.249495 heterogeneous nuclear ribonucleoprotein A1 /FL=gb:NM_002136.1,NM_002136,Hs.249495,Hs.546261,chr12:54674487-54679030 (+) // 95.7 // q13.13 /// chr2:201927748-201929483 (+) // 86.72 // q33.1 /// chr18:29991468-29993200 (-) // 87.22 // q12.1 /// chr5:79654187-79655918 (-) // 85.59 // q14.1,heterogeneous nuclear ribonucleoprotein A1,HNRNPA1,chr12q13.1,full length,ENSG00000135486 /// ENSG00000215492,3178,B4DP35 /// B4E0B5 /// F8VRQ1 /// F8VSB5 /// F8VTQ5 /// F8VXY0 /// F8VYN5 /// F8VZ49 /// F8W1S7 /// F8W646 /// F8W6I7 /// H0YH80 /// P09651 /// Q0VAC0 /// Q3MI39 /// Q6IPF2 /// Q9BSM5,---,164017,NP_002127 /// NP_112420,NM_002136 /// NM_031157,0000380 // alternative nuclear mRNA splicing via spliceosome // inferred from electronic annotation /// 0000398 // nuclear m
RNA splicing via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006405 // RNA export from nucleus // inferred by curator /// 0006405 // RNA export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051168 // nuclear export // inferred from direct assay /// 0051170 // nuclear import // inferred from direct assay,0005634 // nucleus // inferred from direct assay /// 0
005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030530 // heterogeneous nuclear ribonucleoprotein complex // traceable author statement /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay,0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003697 // single-stranded DNA bindin
g // inferred from direct assay /// 0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred by curator,---,IPR000504 // RNA recognition motif domain // 9.2E-23 /// IPR000504 // RNA recognition motif domain // 1.1E-23 /// IPR000504 // RNA recognition motif domain // 8.4E-23 /// IPR000504 // RNA recognition motif domain // 1.0E-23 /// IPR000504 // RNA recognition motif domain // 8.5E-23 /// IPR000504 // RNA recognition motif domain // 5.9E-23 /// IPR000504 // RNA recognition motif domain // 7.0E-24 /// IPR000504 // RNA recognition motif domain // 9.6E-23 /// IPR000504 // RNA recognition motif domain // 1.2E-23 /// IPR000504 // RNA recognition motif domain // 6.7E-23 /// IPR000504 // RNA recognition motif domain // 7.9E-24 /// IPR021662 // Nuclear factor hnRNPA1 // 9.9E-19 /// IPR021662 // Nuclear factor hnRNPA1 // 9.2E-19 /// IPR021662 // Nuclear factor hnRNPA1
// 9.3E-19 /// IPR021662 // Nuclear factor hnRNPA1 // 1.0E-18 /// IPR021662 // Nuclear factor hnRNPA1 // 9.4E-19 /// IPR021662 // Nuclear factor hnRNPA1 // 5.2E-19,BC002355(11) BC009600(11) BC012158(11) BC033714(11) BC052296(11) BC074502(11) BC103707(11) ENST00000330752(11) ENST00000340913(11) ENST00000546500(11) ENST00000547276(11) ENST00000547617(11) ENST00000551133(11) ENST00000552494(11) ENST00000552591(11) NM_002136(11) NM_031157(11),BC002355 // Homo sapiens heterogeneous nuclear ribonucleoprotein A1 mRNA (cDNA clone MGC:8473 IMAGE:2821751) complete cds. // gb // 11 // --- /// BC009600 // Homo sapiens heterogeneous nuclear ribonucleoprotein A1 mRNA (cDNA clone MGC:14692 IMAGE:4134638) complete cds. // gb // 11 // --- /// BC012158 // Homo sapiens heterogeneous nuclear ribonucleoprotein A1 mRNA (cDNA clone MGC:20389 IMAGE:4564655) complete cds. // gb // 11 // --- /// BC033714 // Homo sapiens heterogeneous nuclear ribonucleoprotein A1 mRNA (cDNA clone MGC:45574 IMA
GE:4420039) complete cds. // gb // 11 // --- /// BC052296 // Homo sapiens heterogeneous nuclear ribonucleoprotein A1 mRNA (cDNA clone MGC:59854 IMAGE:6297642) complete cds. // gb // 11 // --- /// BC074502 // Homo sapiens heterogeneous nuclear ribonucleoprotein A1 mRNA (cDNA clone MGC:65152 IMAGE:3455742) complete cds. // gb // 11 // --- /// BC103707 // Homo sapiens heterogeneous nuclear ribonucleoprotein A1 mRNA (cDNA clone MGC:102835 IMAGE:6154800) complete cds. // gb // 11 // --- /// ENST00000330752 // cdna:known chromosome:GRCh37:12:54674539:54679018:1 gene:ENSG00000135486 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000340913 // cdna:known chromosome:GRCh37:12:54674539:54678998:1 gene:ENSG00000135486 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000400448 // cdna:pseudogene chromosome:GRCh37:18:29991471:29993167:-1 gene:ENSG00000215492 gene_biotype:pseudogene trans
cript_biotype:processed_pseudogene // ensembl // 10 // --- /// ENST00000546500 // cdna:known chromosome:GRCh37:12:54673977:54680871:1 gene:ENSG00000135486 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000547276 // cdna:known chromosome:GRCh37:12:54674564:54679035:1 gene:ENSG00000135486 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000547617 // cdna:novel chromosome:GRCh37:12:54674533:54678981:1 gene:ENSG00000135486 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000551133 // cdna:novel chromosome:GRCh37:12:54674559:54679015:1 gene:ENSG00000135486 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000552494 // cdna:putative chromosome:GRCh37:12:54674539:54678995:1 gene:ENSG00000135486 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST000005525
91 // cdna:putative chromosome:GRCh37:12:54674540:54678999:1 gene:ENSG00000135486 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// NM_002136 // Homo sapiens heterogeneous nuclear ribonucleoprotein A1 (HNRNPA1) transcript variant 1 mRNA. // refseq // 11 // --- /// NM_031157 // Homo sapiens heterogeneous nuclear ribonucleoprotein A1 (HNRNPA1) transcript variant 2 mRNA. // refseq // 11 // ---,TCONS_l2_00009739-XLOC_l2_005225 // broad-tucp // 3 // Cross Hyb Matching Probes /// TCONS_00007807-XLOC_004032 // broad-lncrna // 2 // Cross Hyb Matching Probes /// AK126454 // gb // 3 // Cross Hyb Matching Probes /// AK298176 // gb // 7 // Cross Hyb Matching Probes /// BC061889 // gb // 2 // Cross Hyb Matching Probes /// BC071945 // gb // 7 // Cross Hyb Matching Probes /// BC073162 // gb // 7 // Cross Hyb Matching Probes /// BC108266 // gb // 3 // Cross Hyb Matching Probes /// BC121133 // gb // 3 // Cross Hyb Matching Probes /// ENST0000035749
5 // ensembl // 3 // Cross Hyb Matching Probes /// ENST00000342657 // ensembl // 3 // Cross Hyb Matching Probes /// ENST00000398039 // ensembl // 3 // Cross Hyb Matching Probes /// ENST00000420780 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000562726 // ensembl // 5 // Cross Hyb Matching Probes /// ENST00000504082 // ensembl // 2 // Cross Hyb Matching Probes /// BC045662 // gb_htc // 6 // Cross Hyb Matching Probes /// AK308679 // gb_htc // 3 // Cross Hyb Matching Probes /// NM_001011724 // refseq // 3 // Cross Hyb Matching Probes /// NM_001011725 // refseq // 3 // Cross Hyb Matching Probes /// NR_002944 // refseq // 5 // Cross Hyb Matching Probes
+200017_at,g4506712,gb:NM_002954.1 /DEF=Homo sapiens ribosomal protein S27a (RPS27A) mRNA. /FEA=mRNA /GEN=RPS27A /PROD=ribosomal protein S27a /DB_XREF=gi:4506712 /UG=Hs.3297 ribosomal protein S27a /FL=gb:BC001392.1 gb:BC005328.1 gb:NM_002954.1,NM_002954,Hs.3297,Hs.311640,chr1:192685274-192685813 (+) // 93.89 // q31.2 /// chr2:55459823-55462744 (+) // 99.63 // p16.1 /// chr16:61089318-61089842 (-) // 95.37 // q21,ribosomal protein S27a,RPS27A,chr2p16,full length,ENSG00000143947 /// ENSG00000224631,6233,B2RDW1 /// P62979 /// Q49A90 /// Q5RKT7,---,191343,NP_001129064 /// NP_001170884 /// NP_002945,NM_001135592 /// NM_001177413 /// NM_002954,0000075 // cell cycle checkpoint // traceable author statement /// 0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabo
lic process nonsense-mediated decay // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I TAP-dependent // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006412 // translation // inferre
d by curator /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0006977 // DNA damage response signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappa
B cascade // traceable author statement /// 0007254 // JNK cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031145 // anap
hase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC c
lass I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046788 // egress of virus within host cell // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein liga
se activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement,0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex
// inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement,0003735 // structural constituent of ribosome // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation,---,IPR000626 // Ubiquitin // 1.1E-38 /// IPR000626 // Ubiquitin // 2.5E-39 /// IPR002906 // Ribosomal protein S27a // 7.5E-32 /// IPR022617 // Small ubiquitin-related modifier SUMO // 7.7E-24 /// IPR022617 // Small ubiquitin-related modifier SUMO // 1.8E-24,AK093614(9) AK225718(11) AY952889(10) BC001392(11) BC042362(11) BC053371(11) BC066293(11) ENST00000272317(11) ENST00000402285(11) ENST00000404735(11) ENST00000449323(9) ENST00000478196(9) ENST00000495843(11) NM_001135592(11) NM_001177413(11) NM_002954(11),AK093614 // Homo sapiens cDNA FLJ36295 fis clone THYMU2004152. // gb // 9 // --- /// AK225718 // Homo sapiens mRNA for bA92
K2.2 variant clone: TMS08221. // gb // 11 // --- /// AY952889 // Homo sapiens antigen MMSA-8 mRNA sequence. // gb // 10 // --- /// BC001392 // Homo sapiens ribosomal protein S27a mRNA (cDNA clone MGC:1629 IMAGE:3050927) complete cds. // gb // 11 // --- /// BC042362 // Homo sapiens ribosomal protein S27a mRNA (cDNA clone MGC:57125 IMAGE:4831143) complete cds. // gb // 11 // --- /// BC053371 // Homo sapiens ribosomal protein S27a mRNA (cDNA clone MGC:61435 IMAGE:5531043) complete cds. // gb // 11 // --- /// BC066293 // Homo sapiens ribosomal protein S27a mRNA (cDNA clone MGC:86974 IMAGE:30336950) complete cds. // gb // 11 // --- /// ENST00000272317 // cdna:known chromosome:GRCh37:2:55459538:55462989:1 gene:ENSG00000143947 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000402285 // cdna:known chromosome:GRCh37:2:55459039:55462724:1 gene:ENSG00000143947 gene_biotype:protein_coding transcript_biotype:protein_coding // ense
mbl // 11 // --- /// ENST00000404735 // cdna:known chromosome:GRCh37:2:55459814:55462891:1 gene:ENSG00000143947 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000444907 // cdna:pseudogene chromosome:GRCh37:16:61089349:61089818:-1 gene:ENSG00000224631 gene_biotype:pseudogene transcript_biotype:pseudogene // ensembl // 9 // --- /// ENST00000449323 // cdna:known chromosome:GRCh37:2:55459568:55462095:1 gene:ENSG00000143947 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 9 // --- /// ENST00000478196 // cdna:known chromosome:GRCh37:2:55459825:55462320:1 gene:ENSG00000143947 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 9 // --- /// ENST00000492222 // cdna:pseudogene chromosome:GRCh37:16:61089349:61089818:-1 gene:ENSG00000224631 gene_biotype:pseudogene transcript_biotype:processed_pseudogene // ensembl // 9 // --- /// ENST00000495843 // cdna:known chromosome:GRCh37:2:55459931
:55462745:1 gene:ENSG00000143947 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 11 // --- /// GENSCAN00000035423 // cdna:genscan chromosome:GRCh37:2:55452767:55462713:1 transcript_biotype:protein_coding // ensembl // 9 // --- /// NM_001135592 // Homo sapiens ribosomal protein S27a (RPS27A) transcript variant 2 mRNA. // refseq // 11 // --- /// NM_001177413 // Homo sapiens ribosomal protein S27a (RPS27A) transcript variant 3 mRNA. // refseq // 11 // --- /// NM_002954 // Homo sapiens ribosomal protein S27a (RPS27A) transcript variant 1 mRNA. // refseq // 11 // ---,TCONS_l2_00000739-XLOC_l2_000553 // broad-tucp // 5 // Cross Hyb Matching Probes /// TCONS_l2_00001532-XLOC_l2_001118 // broad-tucp // 1 // Cross Hyb Matching Probes /// AK129972 // gb // 7 // Cross Hyb Matching Probes /// GENSCAN00000000381 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000001683 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000006016 // ense
mbl // 2 // Cross Hyb Matching Probes /// GENSCAN00000006504 // ensembl // 7 // Cross Hyb Matching Probes /// GENSCAN00000010010 // ensembl // 8 // Cross Hyb Matching Probes /// GENSCAN00000038302 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000041701 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000471772 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000494756 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000468810 // ensembl // 8 // Cross Hyb Matching Probes /// ENST00000443181 // ensembl // 7 // Cross Hyb Matching Probes /// ENST00000497083 // ensembl // 7 // Cross Hyb Matching Probes /// ENST00000427962 // ensembl // 1 // Cross Hyb Matching Probes /// ENST00000402798 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000453803 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000429552 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000329806 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000463344 // ensemb
l // 2 // Cross Hyb Matching Probes /// ENST00000475545 // ensembl // 4 // Cross Hyb Matching Probes /// hsa-mir-4426 // mirbase // 4 // Cross Hyb Matching Probes /// NR_039624 // refseq // 4 // Cross Hyb Matching Probes
+200018_at,g4506684,gb:NM_001017.1 /DEF=Homo sapiens ribosomal protein S13 (RPS13) mRNA. /FEA=mRNA /GEN=RPS13 /PROD=ribosomal protein S13 /DB_XREF=gi:4506684 /UG=Hs.165590 ribosomal protein S13 /FL=gb:BC000475.1 gb:L01124.1 gb:NM_001017.1,NM_001017,Hs.165590,Hs.446588,chr1:53237826-53238346 (-) // 95.85 // p32.3 /// chr11:17095940-17099220 (-) // 99.43 // p15.1,uncharacterized LOC100508408 /// ribosomal protein S13 /// small nucleolar RNA C/D box 14B,LOC100508408 /// RPS13 /// SNORD14B,chr11p15,full length,ENSG00000110700,100508408 /// 6207 /// 85388,P62277,EC:3.6.5.3,180476,NP_001008,NM_001017 /// NR_001452 /// XR_111163,0000184 // nuclear-transcribed mRNA catabolic process nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 00
06414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0033119 // negative regulation of RNA splicing // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement,0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol
// traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation,0003729 // mRNA binding // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction,Ribosomal_Proteins // GenMAPP /// Ribosomal_Proteins // GenMAPP,IPR000589 // Ribosomal protein S15 // 3.4E-12 /// IPR000589 // Ribosomal protein S15 // 1.7E-27 /// IPR012606 // Ribosomal protein S13/S15 N-terminal // 2.9E-33 /// IPR012606 // Ribosomal protein S13/S15 N-terminal // 3.0E-33,BC000475(11) BC006772(11) BC029732(11) BC066322(11) BC100032(11) L01124(11) ENST00000531008(9) ENST00000531908(9) ENST00000228140(10) ENST00000526895(11) ENST00000525634(11) E
NST00000525828(11) NM_001017(11),BC000475 // Homo sapiens ribosomal protein S13 mRNA (cDNA clone MGC:8648 IMAGE:2961637) complete cds. // gb // 11 // --- /// BC006772 // Homo sapiens ribosomal protein S13 mRNA (cDNA clone MGC:5071 IMAGE:2899987) complete cds. // gb // 11 // --- /// BC029732 // Homo sapiens ribosomal protein S13 mRNA (cDNA clone MGC:21924 IMAGE:4388273) complete cds. // gb // 11 // --- /// BC066322 // Homo sapiens ribosomal protein S13 mRNA (cDNA clone MGC:87221 IMAGE:4816284) complete cds. // gb // 11 // --- /// BC100032 // Homo sapiens ribosomal protein S13 mRNA (cDNA clone MGC:111778 IMAGE:6025884) complete cds. // gb // 11 // --- /// ENST00000228140 // cdna:putative chromosome:GRCh37:11:17095936:17099213:-1 gene:ENSG00000110700 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 10 // --- /// ENST00000525634 // cdna:known chromosome:GRCh37:11:17095936:17099334:-1 gene:ENSG00000110700 gene_biotype:protein_coding transcript
_biotype:protein_coding // ensembl // 11 // --- /// ENST00000525828 // cdna:known chromosome:GRCh37:11:17095940:17099215:-1 gene:ENSG00000110700 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 11 // --- /// ENST00000526895 // cdna:known chromosome:GRCh37:11:17095936:17099253:-1 gene:ENSG00000110700 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 11 // --- /// ENST00000531008 // cdna:known chromosome:GRCh37:11:17095936:17097159:-1 gene:ENSG00000110700 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 9 // --- /// ENST00000531908 // cdna:known chromosome:GRCh37:11:17095936:17097567:-1 gene:ENSG00000110700 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 9 // --- /// L01124 // Human ribosomal protein S13 (RPS13) mRNA complete cds. // gb // 11 // --- /// NM_001017 // Homo sapiens ribosomal protein S13 (RPS13) mRNA. // refseq // 11 // ---,D00099 // gb // 2 // Cr
oss Hyb Matching Probes /// GENSCAN00000014086 // ensembl // 6 // Cross Hyb Matching Probes /// ENST00000533969 // ensembl // 6 // Cross Hyb Matching Probes /// ENST00000527571 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000534329 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000528074 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000437890 // ensembl // 8 // Cross Hyb Matching Probes /// ENST00000486386 // ensembl // 2 // Cross Hyb Matching Probes
+200019_s_at,g4503658,gb:NM_001997.1 /DEF=Homo sapiens Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived); ribosomal protein S30 (FAU) mRNA. /FEA=mRNA /GEN=FAU /PROD=Finkel-Biskis-Reilly murine sarcoma virus(FBR-MuSV) ubiquitously expressed (fox derived); ribosomalprotein S30 /DB_XREF=gi:4503658 /UG=Hs.177415 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived); ribosomal protein S30 /FL=gb:NM_001997.1,NM_001997,Hs.177415,Hs.387208,chr11:64888102-64889609 (-) // 97.88 // q13.1,Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed,FAU,chr11q13,full length,ENSG00000149806 /// ENSG00000235297,2197,E9PM49 /// E9PMS9 /// E9PR30 /// P35544 /// P62861,---,134690,NP_001988,NM_001997,0000184 // nuclear-transcribed mRNA catabolic process nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // inferred from ele
ctronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement,0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 000
5840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation,0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from electronic annotation,Ribosomal_Proteins // GenMAPP /// Ribosomal_Proteins // GenMAPP /// Ribosomal_Proteins // GenMAPP,IPR000626 // Ubiquitin // 1.3E-18 /// IPR000626 // Ubiquitin // 3.7E-19 /// IPR000626 // Ubiquitin // 2.3E-19 /// IPR000626 // Ubiquitin // 7.4E-19 /// IPR006846 // Ribosomal protein S30 // 1.3E-34 /// IPR006846 // Ribosomal protein S30 // 3.0E-35 /// IPR006846 // Ribosomal protein S30 // 6.1E-21 /// IPR022617 // Small ubiquitin-related modifier SUMO // 3.4E-9 /// IPR022617 // Smal
l ubiquitin-related modifier SUMO // 2.0E-9,BC033877(11) BC051834(11) CR541974(11) ENST00000279259(11) ENST00000434372(10) ENST00000525297(11) ENST00000526555(11) ENST00000527548(11) ENST00000529259(11) ENST00000529639(11) ENST00000531357(11) ENST00000531743(11) NM_001997(11),BC033877 // Homo sapiens Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed mRNA (cDNA clone MGC:45978 IMAGE:5758816) complete cds. // gb // 11 // --- /// BC051834 // Homo sapiens cDNA clone IMAGE:5212028 partial cds. // gb // 11 // --- /// CR541974 // Homo sapiens full open reading frame cDNA clone RZPDo834G1234D for gene FAU Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived); ribosomal protein S30; complete cds incl. stopcodon. // gb // 11 // --- /// ENST00000279259 // cdna:putative chromosome:GRCh37:11:64888110:64889625:-1 gene:ENSG00000149806 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- ///
ENST00000434372 // cdna:putative chromosome:GRCh37:11:64888755:64889649:-1 gene:ENSG00000149806 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 10 // --- /// ENST00000474180 // cdna:pseudogene chromosome:GRCh37:18:72057119:72057532:-1 gene:ENSG00000235297 gene_biotype:pseudogene transcript_biotype:processed_pseudogene // ensembl // 10 // --- /// ENST00000525297 // cdna:novel chromosome:GRCh37:11:64888103:64889293:-1 gene:ENSG00000149806 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000526555 // cdna:known chromosome:GRCh37:11:64888229:64889585:-1 gene:ENSG00000149806 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000527548 // cdna:known chromosome:GRCh37:11:64888103:64889585:-1 gene:ENSG00000149806 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000529259 // cdna:putative chromosome:GRCh37:11:64888169:
64889387:-1 gene:ENSG00000149806 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000529639 // cdna:known chromosome:GRCh37:11:64888100:64889945:-1 gene:ENSG00000149806 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000531357 // cdna:known chromosome:GRCh37:11:64888106:64889589:-1 gene:ENSG00000149806 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 11 // --- /// ENST00000531743 // cdna:known chromosome:GRCh37:11:64888102:64889529:-1 gene:ENSG00000149806 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// GENSCAN00000021899 // cdna:genscan chromosome:GRCh37:18:72057119:72057631:-1 transcript_biotype:protein_coding // ensembl // 10 // --- /// GENSCAN00000023953 // cdna:genscan chromosome:GRCh37:11:64888153:64889285:-1 transcript_biotype:protein_coding // ensembl // 11 // --- /// NM_001997 // Homo sapiens Finkel-Biski
s-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (FAU) mRNA. // refseq // 11 // ---,X75315 // gb // 4 // Cross Hyb Matching Probes
+200020_at,g6678270,gb:NM_007375.1 /DEF=Homo sapiens TAR DNA binding protein (TARDBP) mRNA. /FEA=mRNA /GEN=TARDBP /PROD=TAR DNA binding protein /DB_XREF=gi:6678270 /UG=Hs.193989 TAR DNA binding protein /FL=gb:AL050265.1 gb:NM_007375.1 gb:U23731.1,NM_007375,Hs.193989,Hs.300624,chr1:11072728-11084101 (+) // 99.02 // p36.22,TAR DNA binding protein,TARDBP,chr1p36.22,full length,ENSG00000120948,23435,B1AKP7 /// B4DJ45 /// B4DRW3 /// G3V162 /// Q13148 /// Q9H256,---,605078 /// 612069,NP_031401,NM_007375,0006351 // transcription DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription DNA-dependent // traceable author statement /// 0006355 // regulation of transcription DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotat
ion /// 0008380 // RNA splicing // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation /// 0043922 // negative regulation by host of viral transcription // inferred from direct assay /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from direct assay,0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay,0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 000
3730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction,---,IPR000504 // RNA recognition motif domain // 4.5E-20 /// IPR000504 // RNA recognition motif domain // 2.0E-15 /// IPR000504 // RNA recognition motif domain // 2.6E-20 /// IPR000504 // RNA recognition motif domain // 1.2E-15,BC071657(11) BC095435(11) ENST00000240185(11) ENST00000315091(11) NM_007375(11),BC071657 // Homo sapiens TAR DNA binding protein mRNA (cDNA clone MGC:87845 IMAGE:5498250) complete cds. // gb // 11 // --- /// BC095435 // Homo sapiens TAR DNA binding protein mRNA (cDNA clone MGC:111119 IMAGE:30389805) complete cds. // gb // 11 // --- /// ENST00000240185 // cdna:known chromosome:GRCh37:1:11072699:11084100:1 gene:ENSG00000120948 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000315091 // cdna:known chromosome:GRCh37:1:11073773:11084240:1 gene:ENSG00000120948 gene_biotype:protein
_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// NM_007375 // Homo sapiens TAR DNA binding protein (TARDBP) mRNA. // refseq // 11 // --- /// NR_026923 // Homo sapiens TAR DNA binding protein pseudogene (LOC643387) non-coding RNA. // refseq // 9 // ---,---
+200021_at,g5031634,gb:NM_005507.1 /DEF=Homo sapiens cofilin 1 (non-muscle) (CFL1) mRNA. /FEA=mRNA /GEN=CFL1 /PROD=cofilin 1 (non-muscle) /DB_XREF=gi:5031634 /UG=Hs.180370 cofilin 1 (non-muscle) /FL=gb:NM_005507.1,NM_005507,Hs.180370,Hs.170622,chr11:65622307-65625621 (-) // 98.96 // q13.1,cofilin 1 (non-muscle),CFL1,chr11q13,full length,ENSG00000172757,1072,B4E112 /// G3V1A4 /// P23528,---,601442,NP_005498,NM_005507,0002576 // platelet degranulation // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007266 // Rho protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0009615 // response to virus // inferred from expression pattern /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype /// 0030036 // actin
cytoskeleton organization // traceable author statement /// 0030168 // platelet activation // traceable author statement,0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0031258 // lamellipodium membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation,0003779 // actin binding // inferred from electronic annotation /// 0005515 // prot
ein binding // inferred from physical interaction,G13_Signaling_Pathway // GenMAPP,IPR002108 // Actin-binding cofilin/tropomyosin type // 3.8E-44 /// IPR002108 // Actin-binding cofilin/tropomyosin type // 2.6E-44,AK097690(11) BC011005(11) BC012265(11) BC012318(11) BC018256(11) ENST00000308162(11) ENST00000524553(9) ENST00000525451(11) ENST00000527344(10) ENST00000530945(11) NM_005507(11),AK097690 // Homo sapiens cDNA FLJ40371 fis clone TESTI2034931 highly similar to Cofilin-1. // gb // 11 // --- /// AK123187 // Homo sapiens cDNA FLJ41193 fis clone BRACE2045300 highly similar to COFILIN NON-MUSCLE ISOFORM. // gb // 11 // --- /// AK303614 // Homo sapiens cDNA FLJ51435 complete cds moderately similar to Cofilin-1. // gb // 10 // --- /// BC011005 // Homo sapiens cofilin 1 (non-muscle) mRNA (cDNA clone MGC:16554 IMAGE:4079579) complete cds. // gb // 11 // --- /// BC012265 // Homo sapiens cofilin 1 (non-muscle) mRNA (cDNA clone MGC:9272 IMAGE:3862540) complete cds. //
gb // 11 // --- /// BC012318 // Homo sapiens cofilin 1 (non-muscle) mRNA (cDNA clone MGC:15952 IMAGE:3538185) complete cds. // gb // 11 // --- /// BC018256 // Homo sapiens cofilin 1 (non-muscle) mRNA (cDNA clone MGC:17447 IMAGE:3448134) complete cds. // gb // 11 // --- /// ENST00000308162 // cdna:known chromosome:GRCh37:11:65622308:65625804:-1 gene:ENSG00000172757 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000524553 // cdna:putative chromosome:GRCh37:11:65622525:65624435:-1 gene:ENSG00000172757 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 9 // --- /// ENST00000525451 // cdna:known chromosome:GRCh37:11:65622272:65626886:-1 gene:ENSG00000172757 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000527344 // cdna:putative chromosome:GRCh37:11:65622446:65624504:-1 gene:ENSG00000172757 gene_biotype:protein_coding transcript_biotype:protein_coding //
ensembl // 10 // --- /// ENST00000530945 // cdna:known chromosome:GRCh37:11:65622303:65625665:-1 gene:ENSG00000172757 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 11 // --- /// NM_005507 // Homo sapiens cofilin 1 (non-muscle) (CFL1) mRNA. // refseq // 11 // ---,BT006846 // gb // 2 // Cross Hyb Matching Probes /// D00682 // gb // 2 // Cross Hyb Matching Probes /// GENSCAN00000036958 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000037253 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000531407 // ensembl // 7 // Cross Hyb Matching Probes /// ENST00000534769 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000531413 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000440986 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000576793 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000508046 // ensembl // 2 // Cross Hyb Matching Probes
+200022_at,g4506606,gb:NM_000979.1 /DEF=Homo sapiens ribosomal protein L18 (RPL18) mRNA. /FEA=mRNA /GEN=RPL18 /PROD=ribosomal protein L18 /DB_XREF=gi:4506606 /UG=Hs.75458 ribosomal protein L18 /FL=gb:BC000374.1 gb:L11566.1 gb:NM_000979.1,NM_000979,Hs.75458,Hs.515517,chr19:49118588-49121135 (-) // 96.03 // q13.33,ribosomal protein L18,RPL18,chr19q13,full length,ENSG00000063177,6141,B4DDY5 /// E7EW92 /// F8VUA6 /// F8VWC5 /// F8VXR6 /// F8VYV2 /// G3V203 /// H0YHA7 /// Q07020,---,604179,NP_000970,NM_000979,0000184 // nuclear-transcribed mRNA catabolic process nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // tr
aceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement,0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable a
uthor statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation,0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement,Ribosomal_Proteins // GenMAPP,IPR021131 // Ribosomal protein L18e/L15P // 6.9E-31 /// IPR021131 // Ribosomal protein L18e/L15P // 7.2E-31 /// IPR021131 // Ribosomal protein L18e/L15P // 7.3E-21 /// IPR021131 // Ribosomal protein L18e/L15P // 3.4E-23 /// IPR021131 // Ribosomal protein L18e/L15P // 4.8E-22 /// IPR021131 // Ribosomal protein L18e/L15P // 4.5E-31 /// IPR021131 // Ribosomal protein L18e/L15P // 3.4E-19 /// IPR021131 // Ribosomal protein L18e/L15P // 6.0E-21,AK293386(10) BC000374(11) BC009708(11) BC021743(11) ENST00000084795(11) ENST00000450952(10) ENST00000546623(11) E
NST00000547892(11) ENST00000547897(10) ENST00000549273(11) ENST00000549370(11) ENST00000549920(11) ENST00000550645(10) ENST00000550973(11) ENST00000551749(11) ENST00000552347(11) ENST00000552588(11) ENST00000552705(10) L11566(11) NM_000979(11),AK091257 // Homo sapiens cDNA FLJ33938 fis clone CTONG2017998. // gb // 11 // --- /// AK293386 // Homo sapiens cDNA FLJ59178 complete cds moderately similar to 60S ribosomal protein L18. // gb // 10 // --- /// BC000374 // Homo sapiens ribosomal protein L18 mRNA (cDNA clone MGC:8373 IMAGE:2820119) complete cds. // gb // 11 // --- /// BC009708 // Homo sapiens ribosomal protein L18 mRNA (cDNA clone MGC:9403 IMAGE:3878799) complete cds. // gb // 11 // --- /// BC021743 // Homo sapiens ribosomal protein L18 mRNA (cDNA clone MGC:33859 IMAGE:5261251) complete cds. // gb // 11 // --- /// BC051359 // Homo sapiens ribosomal protein L18 mRNA (cDNA clone IMAGE:6646239). // gb_htc // 11 // --- /// ENST00000084795 // cdna:putative chromosome
:GRCh37:19:49118588:49121141:-1 gene:ENSG00000063177 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000450952 // cdna:known chromosome:GRCh37:19:49119871:49122433:-1 gene:ENSG00000063177 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 10 // --- /// ENST00000546623 // cdna:novel chromosome:GRCh37:19:49118590:49121054:-1 gene:ENSG00000063177 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000547892 // cdna:known chromosome:GRCh37:19:49118589:49122432:-1 gene:ENSG00000063177 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 11 // --- /// ENST00000547897 // cdna:known chromosome:GRCh37:19:49118587:49122425:-1 gene:ENSG00000063177 gene_biotype:protein_coding transcript_biotype:processed_transcript // ensembl // 10 // --- /// ENST00000549273 // cdna:putative chromosome:GRCh37:19:49118623:49122434:-1 gene:ENSG00000063177 gene_biotyp
e:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000549370 // cdna:known chromosome:GRCh37:19:49118593:49122433:-1 gene:ENSG00000063177 gene_biotype:protein_coding transcript_biotype:nonsense_mediated_decay // ensembl // 11 // --- /// ENST00000549920 // cdna:known chromosome:GRCh37:19:49118585:49122793:-1 gene:ENSG00000063177 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000550645 // cdna:novel chromosome:GRCh37:19:49118588:49122420:-1 gene:ENSG00000063177 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 10 // --- /// ENST00000550973 // cdna:putative chromosome:GRCh37:19:49118650:49122384:-1 gene:ENSG00000063177 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000551749 // cdna:known chromosome:GRCh37:19:49118588:49122440:-1 gene:ENSG00000063177 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl
// 11 // --- /// ENST00000552347 // cdna:known chromosome:GRCh37:19:49118585:49122420:-1 gene:ENSG00000063177 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 11 // --- /// ENST00000552588 // cdna:novel chromosome:GRCh37:19:49118588:49122438:-1 gene:ENSG00000063177 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000552705 // cdna:known chromosome:GRCh37:19:49119239:49122440:-1 gene:ENSG00000063177 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 10 // --- /// GENSCAN00000043061 // cdna:genscan chromosome:GRCh37:19:49106634:49122400:-1 transcript_biotype:protein_coding // ensembl // 11 // --- /// L11566 // Homo sapiens ribosomal protein L18 (RPL18) mRNA complete cds. // gb // 11 // --- /// NM_000979 // Homo sapiens ribosomal protein L18 (RPL18) mRNA. // refseq // 11 // ---,TCONS_l2_00004485-XLOC_l2_002290 // broad-tucp // 2 // Cross Hyb Matching Probes /// TCONS_l2_00010
291-XLOC_l2_005557 // broad-tucp // 4 // Cross Hyb Matching Probes /// TCONS_l2_00010290-XLOC_l2_005557 // broad-tucp // 4 // Cross Hyb Matching Probes /// GENSCAN00000025486 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000026072 // ensembl // 4 // Cross Hyb Matching Probes /// GENSCAN00000026446 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000028022 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000549533 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000552851 // ensembl // 7 // Cross Hyb Matching Probes /// ENST00000550671 // ensembl // 8 // Cross Hyb Matching Probes /// ENST00000486306 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000459875 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000422478 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000478088 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000454750 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000494933 // ensembl // 4 // Cross
Hyb Matching Probes /// ENST00000466718 // ensembl // 4 // Cross Hyb Matching Probes
+200023_s_at,g4503518,gb:NM_003754.1 /DEF=Homo sapiens eukaryotic translation initiation factor 3 subunit 5 (epsilon 47kD) (EIF3S5) mRNA. /FEA=mRNA /GEN=EIF3S5 /PROD=eukaryotic translation initiation factor 3 subunit 5 (epsilon 47kD) /DB_XREF=gi:4503518 /UG=Hs.7811 eukaryotic translation initiation factor 3 subunit 5 (epsilon 47kD) /FL=gb:BC000490.1 gb:U94855.1 gb:NM_003754.1,AI001896,Hs.7811,Hs.516023,chr11:8008893-8017711 (+) // 90.74 // p15.4 /// chr2:58478568-58479802 (+) // 89.68 // p16.1,eukaryotic translation initiation factor 3 subunit F,EIF3F,chr11p15.4,full length,ENSG00000175390 /// ENSG00000233426,8665,B3KSH1 /// B4DEW9 /// B4DMT5 /// E9PQV8 /// H0YDT6 /// O00303,EC:3.4.19.12,603914,NP_003745,NM_003754,0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 00
06413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement,0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0005852 // eukaryotic translation initiation factor 3 complex // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from electronic annotation,0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // traceable autho
r statement /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation,Translation_Factors // GenMAPP,IPR000555 // JAB1/Mov34/MPN/PAD-1 // 1.2E-28 /// IPR000555 // JAB1/Mov34/MPN/PAD-1 // 1.3E-28 /// IPR000555 // JAB1/Mov34/MPN/PAD-1 // 9.2E-29 /// IPR000555 // JAB1/Mov34/MPN/PAD-1 // 1.8E-11,AK027739(11) AK093511(11) AK095574(11) AK289637(11) AK291354(11) AK293826(11) AK297621(11) BC000490(11) BT006894(11) CR456959(11) ENST00000309828(11) ENST00000449102(11) ENST00000530219(11) ENST00000531329(11) ENST00000533626(11) ENST00000537635(11) ENST00000538607(11) NM_003754(11) U94855(11),AK027739 // Homo sapiens cDNA FLJ14833 fis clone OVARC1001171
moderately similar to Homo sapiens translation initiation factor 3 47 kDa subunit mRNA. // gb // 11 // --- /// AK093511 // Homo sapiens cDNA FLJ36192 fis clone TESTI2027450 highly similar to Eukaryotic translation initiation factor 3 subunit 5. // gb // 11 // --- /// AK095574 // Homo sapiens cDNA FLJ38255 fis clone FCBBF3001020 highly similar to EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. // gb // 11 // --- /// AK289637 // Homo sapiens cDNA FLJ75282 complete cds highly similar to Homo sapiens eukaryotic translation initiation factor 3 subunit 5 epsilon 47kDa (EIF3S5) mRNA. // gb // 11 // --- /// AK291354 // Homo sapiens cDNA FLJ78396 complete cds highly similar to Homo sapiens eukaryotic translation initiation factor 3 subunit 5 epsilon 47kDa (EIF3S5) mRNA. // gb // 11 // --- /// AK293826 // Homo sapiens cDNA FLJ52478 complete cds highly similar to Eukaryotic translation initiation factor 3 subunit 5. // gb // 11 // --- /// AK297621 // Homo sapiens cDN
A FLJ52696 complete cds highly similar to Eukaryotic translation initiation factor 3 subunit 5. // gb // 11 // --- /// BC000490 // Homo sapiens eukaryotic translation initiation factor 3 subunit F mRNA (cDNA clone MGC:8365 IMAGE:2819946) complete cds. // gb // 11 // --- /// BT006894 // Homo sapiens eukaryotic translation initiation factor 3 subunit 5 epsilon 47kDa mRNA complete cds. // gb // 11 // --- /// CR456959 // Homo sapiens full open reading frame cDNA clone RZPDo834B0519D for gene EIF3S5 eukaryotic translation initiation factor 3 subunit 5 epsilon 47kDa; complete cds incl. stopcodon. // gb // 11 // --- /// ENST00000309828 // cdna:known chromosome:GRCh37:11:8008867:8017716:1 gene:ENSG00000175390 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000449102 // cdna:known chromosome:GRCh37:11:8008888:8017622:1 gene:ENSG00000175390 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /
// ENST00000530219 // cdna:known chromosome:GRCh37:11:8013674:8017716:1 gene:ENSG00000175390 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 11 // --- /// ENST00000531329 // cdna:known chromosome:GRCh37:11:8008884:8017622:1 gene:ENSG00000175390 gene_biotype:protein_coding transcript_biotype:nonsense_mediated_decay // ensembl // 11 // --- /// ENST00000533626 // cdna:known chromosome:GRCh37:11:7991798:8023409:1 gene:ENSG00000175390 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000537260 // cdna:known chromosome:GRCh37:2:58479021:58479703:1 gene:ENSG00000233426 gene_biotype:pseudogene transcript_biotype:retrotransposed // ensembl // 10 // --- /// ENST00000537635 // cdna:known chromosome:GRCh37:11:8008437:8017716:1 gene:ENSG00000175390 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000538607 // cdna:known chromosome:GRCh37:11:8008884:8018101:1 gene:ENSG
00000175390 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// GENSCAN00000034402 // cdna:genscan chromosome:GRCh37:11:8004722:8017569:1 transcript_biotype:protein_coding // ensembl // 11 // --- /// NM_003754 // Homo sapiens eukaryotic translation initiation factor 3 subunit F (EIF3F) mRNA. // refseq // 11 // --- /// U94855 // Homo sapiens translation initiation factor 3 47 kDa subunit mRNA complete cds. // gb // 11 // ---,GENSCAN00000028126 // ensembl // 7 // Cross Hyb Matching Probes /// ENST00000528763 // ensembl // 5 // Cross Hyb Matching Probes /// ENST00000531572 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000537214 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000434851 // ensembl // 7 // Cross Hyb Matching Probes
+200024_at,g4506728,gb:NM_001009.1 /DEF=Homo sapiens ribosomal protein S5 (RPS5) mRNA. /FEA=mRNA /GEN=RPS5 /PROD=ribosomal protein S5 /DB_XREF=gi:4506728 /UG=Hs.76194 ribosomal protein S5 /FL=gb:NM_001009.1 gb:U14970.1,NM_001009,Hs.76194,Hs.378103,chr19:58898670-58906170 (+) // 98.87 // q13.43,ribosomal protein S5,RPS5,chr19q13.4,full length,ENSG00000083845,6193,P46782 /// Q53G25 /// Q59EK8,---,603630,NP_001000,NM_001009,0000184 // nuclear-transcribed mRNA catabolic process nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // inferred from genetic interaction /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // traceable author statement /// 0006414 // translati
onal elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006450 // regulation of translational fidelity // inferred from genetic interaction /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement,0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribo
somal subunit // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation,0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from electronic annotation,Ribosomal_Proteins // GenMAPP,IPR023798 // Ribosomal protein S7 domain // 4.6E-45,AK223106(10) BC015405(10) BC018151(10) BC035830(10) ENST00000196551(10) NM_001009(10) U14970(11),AB209803 // Homo sapiens mRNA for ribosomal protein S5 variant protein. // gb // 10 // --
- /// AK223106 // Homo sapiens mRNA for ribosomal protein S5 variant clone: KAT05451. // gb // 10 // --- /// BC015405 // Homo sapiens ribosomal protein S5 mRNA (cDNA clone MGC:21949 IMAGE:4390892) complete cds. // gb // 10 // --- /// BC018151 // Homo sapiens ribosomal protein S5 mRNA (cDNA clone MGC:9774 IMAGE:3856663) complete cds. // gb // 10 // --- /// BC035830 // Homo sapiens ribosomal protein S5 mRNA (cDNA clone IMAGE:5581961). // gb_htc // 10 // --- /// ENST00000196551 // cdna:known chromosome:GRCh37:19:58898636:58906170:1 gene:ENSG00000083845 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 10 // --- /// GENSCAN00000006260 // cdna:genscan chromosome:GRCh37:19:58897326:58929151:1 transcript_biotype:protein_coding // ensembl // 9 // --- /// NM_001009 // Homo sapiens ribosomal protein S5 (RPS5) mRNA. // refseq // 10 // --- /// U14970 // Human ribosomal protein S5 mRNA complete cds. // gb // 11 // ---,GENSCAN00000004132 // ensembl // 2 /
/ Cross Hyb Matching Probes /// GENSCAN00000008164 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000028182 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000042955 // ensembl // 7 // Cross Hyb Matching Probes /// GENSCAN00000048447 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000449334 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000570744 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000435100 // ensembl // 6 // Cross Hyb Matching Probes /// ENST00000414617 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000472088 // ensembl // 2 // Cross Hyb Matching Probes /// BC015589 // gb_htc // 10 // Negative Strand Matching Probes
+200025_s_at,g4506622,gb:NM_000988.1 /DEF=Homo sapiens ribosomal protein L27 (RPL27) mRNA. /FEA=mRNA /GEN=RPL27 /PROD=ribosomal protein L27 /DB_XREF=gi:4506622 /UG=Hs.111611 ribosomal protein L27 /FL=gb:BC002588.1 gb:L05094.1 gb:L19527.1 gb:NM_000988.1,NM_000988,Hs.111611,Hs.514196,chr17:41150759-41154969 (+) // 94.54 // q21.31,ribosomal protein L27,RPL27,chr17q21,full length,ENSG00000131469,6155,B2R4D8 /// E4W6B6 /// P61353,EC:3.6.5.3,607526,NP_000979,NM_000988,0000184 // nuclear-transcribed mRNA catabolic process nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP
-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement,0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // i
nferred from electronic annotation,0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation,Ribosomal_Proteins // GenMAPP /// Ribosomal_Proteins // GenMAPP,IPR001141 // Ribosomal protein L27e // 2.3E-42 /// IPR005824 // KOW // 6.0E-10,AK124148(11) BC001700(11) BC002588(11) BC007273(11) BC010026(11) BC021886(11) BC098560(11) ENST00000253788(11) L05094(11) L19527(11) NM_000988(11),AK124148 // Homo sapiens cDNA FLJ42154 fis clone THYMU2003542 moderately similar to 60S RIBOSOMAL PROTEIN L27. // gb // 11 // --- /// BC001700 // Homo sapiens ribosomal protein L27 mRNA (cDNA clone MGC:2930 IMAGE:3050183) complete cds. // gb // 11 // --- /// BC002588 // Homo sapiens ribosomal protein L27 mRNA (cDNA clone MGC:1642 IMAGE:3161438) complete cds. // gb // 11 // --- /// BC007273 // Homo sapiens
ribosomal protein L27 mRNA (cDNA clone MGC:15592 IMAGE:3161124) complete cds. // gb // 11 // --- /// BC010026 // Homo sapiens ribosomal protein L27 mRNA (cDNA clone MGC:19677 IMAGE:3354227) complete cds. // gb // 11 // --- /// BC021886 // Homo sapiens ribosomal protein L27 mRNA (cDNA clone IMAGE:3445930). // gb // 11 // --- /// BC098560 // Homo sapiens ribosomal protein L27 mRNA (cDNA clone MGC:111175 IMAGE:30415908) complete cds. // gb // 11 // --- /// ENST00000253788 // cdna:known chromosome:GRCh37:17:41150446:41154956:1 gene:ENSG00000131469 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// FJ655906 // Homo sapiens RPL27/NME2 fusion protein mRNA partial cds. // gb // 11 // --- /// GENSCAN00000019254 // cdna:genscan chromosome:GRCh37:17:41150768:41154937:1 transcript_biotype:protein_coding // ensembl // 11 // --- /// L05094 // Homo sapiens ribosomal protein L27 mRNA complete cds. // gb // 11 // --- /// L19527 // Homo sapiens
ribosomal protein L27 (RPL27) mRNA complete cds. // gb // 11 // --- /// NM_000988 // Homo sapiens ribosomal protein L27 (RPL27) mRNA. // refseq // 11 // ---,GENSCAN00000017010 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000022672 // ensembl // 6 // Cross Hyb Matching Probes /// GENSCAN00000041302 // ensembl // 4 // Cross Hyb Matching Probes /// GENSCAN00000043712 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000441321 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000434035 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000480072 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000468034 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000427253 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000411843 // ensembl // 7 // Cross Hyb Matching Probes
+200026_at,g4506636,gb:NM_000995.1 /DEF=Homo sapiens ribosomal protein L34 (RPL34) mRNA. /FEA=mRNA /GEN=RPL34 /PROD=ribosomal protein L34 /DB_XREF=gi:4506636 /UG=Hs.250895 ribosomal protein L34 /FL=gb:L38941.1 gb:BC001773.1 gb:NM_000995.1,NM_000995,Hs.250895,Hs.438227,chr4:109543104-109546385 (+) // 96.68 // q25,ribosomal protein L34,RPL34,chr4q25,full length,ENSG00000109475,6164,P49207 /// Q5MK14,---,---,NP_000986 /// NP_296374,NM_000995 /// NM_033625,0000184 // nuclear-transcribed mRNA catabolic process nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent
cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement,0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation,0003723 // RNA bindin
g // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement,Ribosomal_Proteins // GenMAPP,IPR008195 // Ribosomal protein L34Ae // 1.7E-41,AF147334(9) AY762981(9) BC001773(10) BC070208(10) BC106009(10) CR542232(10) CR542242(10) ENST00000394665(10) ENST00000394667(10) ENST00000394668(10) ENST00000502534(10) ENST00000504231(9) ENST00000506397(10) L38941(11) NM_000995(10) NM_033625(10),AF147334 // Homo sapiens full length insert cDNA clone YB24H02. // gb // 9 // --- /// AY762981 // Homo sapiens leukemia-associated protein mRNA partial cds. // gb_htc // 9 // --- /// BC001773 // Homo sapiens ribosomal protein L34 mRNA (cDNA clone MGC:1640 IMAGE:3355603) complete cds. // gb // 10 // --- /// BC070208 // Homo sapiens ribosomal protein L34 mRNA (cDNA clone MGC
:88189 IMAGE:6724916) complete cds. // gb // 10 // --- /// BC106009 // Homo sapiens ribosomal protein L34 mRNA (cDNA clone MGC:111005 IMAGE:4390762) complete cds. // gb // 10 // --- /// CR542232 // Homo sapiens full open reading frame cDNA clone RZPDo834E0525D for gene RPL34 ribosomal protein L34; complete cds without stopcodon. // gb // 10 // --- /// CR542242 // Homo sapiens full open reading frame cDNA clone RZPDo834B0126D for gene RPL34 ribosomal protein L34; complete cds incl. stopcodon. // gb // 10 // --- /// ENST00000394665 // cdna:known chromosome:GRCh37:4:109541746:109546411:1 gene:ENSG00000109475 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 10 // --- /// ENST00000394667 // cdna:known chromosome:GRCh37:4:109541722:109546411:1 gene:ENSG00000109475 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 10 // --- /// ENST00000394668 // cdna:known chromosome:GRCh37:4:109541812:109551568:1 gene:ENSG00000109475 gen
e_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 10 // --- /// ENST00000502534 // cdna:known chromosome:GRCh37:4:109541725:109546710:1 gene:ENSG00000109475 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 10 // --- /// ENST00000504231 // cdna:known chromosome:GRCh37:4:109543199:109546336:1 gene:ENSG00000109475 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 9 // --- /// ENST00000506397 // cdna:known chromosome:GRCh37:4:109541789:109546408:1 gene:ENSG00000109475 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 10 // --- /// GENSCAN00000034752 // cdna:genscan chromosome:GRCh37:4:109541505:109546368:1 transcript_biotype:protein_coding // ensembl // 10 // --- /// L38941 // Homo sapiens ribosomal protein L34 (RPL34) mRNA complete cds. // gb // 11 // --- /// NM_000995 // Homo sapiens ribosomal protein L34 (RPL34) transcript variant 1 mRNA. // refseq // 10 // --- /// NM_033
625 // Homo sapiens ribosomal protein L34 (RPL34) transcript variant 2 mRNA. // refseq // 10 // ---,AK055920 // gb // 6 // Cross Hyb Matching Probes /// GENSCAN00000029743 // ensembl // 2 // Cross Hyb Matching Probes /// GENSCAN00000042905 // ensembl // 4 // Cross Hyb Matching Probes /// GENSCAN00000045350 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000503574 // ensembl // 6 // Cross Hyb Matching Probes /// ENST00000432390 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000465389 // ensembl // 4 // Cross Hyb Matching Probes /// ENST00000486062 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000475295 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000419419 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000466433 // ensembl // 2 // Cross Hyb Matching Probes /// ENST00000421454 // ensembl // 2 // Cross Hyb Matching Probes
+200027_at,g7262387,gb:NM_004539.2 /DEF=Homo sapiens asparaginyl-tRNA synthetase (NARS) mRNA. /FEA=mRNA /GEN=NARS /PROD=asparaginyl-tRNA synthetase /DB_XREF=gi:7262387 /UG=Hs.181311 asparaginyl-tRNA synthetase /FL=gb:BC001687.1 gb:D84273.1 gb:NM_004539.2,NM_004539,Hs.181311,Hs.465224,chr18:55267895-55289013 (-) // 99.37 // q21.31,asparaginyl-tRNA synthetase,NARS,chr18q21.31,full length,ENSG00000134440,4677,B4DF91 /// B4DG16 /// B4DGT6 /// B4DN60 /// F5H015 /// O43776,EC:6.1.1.22,108410,NP_004530,NM_004539,0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006421 // asparaginyl-tRNA aminoacylation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement,0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm
// traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement,0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004816 // asparagine-tRNA ligase activity // inferred from electronic annotation /// 0004816 // asparagine-tRNA ligase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation,---,IPR004364 // Aminoacyl-tRNA synthetase class II (D/K/N) // 2.0E-80 /// IPR004365 // Nucleic acid binding OB-fold tRNA/helicase-type // 4.5E-14,BC001687(11) D84273(11) ENST00000256854(11) NM_004539(11),BC001687 // Homo sapiens asparaginyl-
tRNA synthetase mRNA (cDNA clone MGC:855 IMAGE:2987840) complete cds. // gb // 11 // --- /// D84273 // Homo sapiens mRNA for Asparaginyl tRNA Synthetase complete cds. // gb // 11 // --- /// ENST00000256854 // cdna:known chromosome:GRCh37:18:55267896:55289177:-1 gene:ENSG00000134440 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// NM_004539 // Homo sapiens asparaginyl-tRNA synthetase (NARS) mRNA. // refseq // 11 // ---,---
+200028_s_at,g9910251,gb:NM_020151.1 /DEF=Homo sapiens GTT1 protein (GTT1) mRNA. /FEA=mRNA /GEN=GTT1 /PROD=GTT1 protein /DB_XREF=gi:9910251 /UG=Hs.283722 GTT1 protein /FL=gb:AF270647.1 gb:NM_020151.1,NM_020151,Hs.283722,Hs.469331,chr2:96850604-96874508 (-) // 95.78 // q11.2,StAR-related lipid transfer (START) domain containing 7,STARD7,chr2q11.2,full length,ENSG00000084090,56910,A8K575 /// B3KNN8 /// C9JTD3 /// Q9NQZ5,---,---,NP_064536,NM_020151 /// NM_139267,---,0005739 // mitochondrion // inferred from electronic annotation,---,---,IPR002913 // Lipid-binding START // 1.4E-19,AF270647(11) AK094925(11) BC007894(11) BC008894(11) BC009998(11) BC012774(11) BC012793(11) BC013279(11) BC014076(11) BC014274(11) BC032106(11) ENST00000337288(11) ENST00000479456(11) NM_020151(11),AF270647 // Homo sapiens GTT1 mRNA complete cds. // gb // 11 // --- /// AK094925 // Homo sapiens cDNA FLJ37606 fis clone BRCOC2010730 moderately similar to Homo sapiens GTT1 mRNA. // gb // 11 // --- /// BC
007894 // Homo sapiens StAR-related lipid transfer (START) domain containing 7 mRNA (cDNA clone MGC:14282 IMAGE:4134933) complete cds. // gb // 11 // --- /// BC008894 // Homo sapiens StAR-related lipid transfer (START) domain containing 7 mRNA (cDNA clone MGC:10703 IMAGE:3833465) complete cds. // gb // 11 // --- /// BC009998 // Homo sapiens StAR-related lipid transfer (START) domain containing 7 mRNA (cDNA clone MGC:15094 IMAGE:4128869) complete cds. // gb // 11 // --- /// BC012774 // Homo sapiens StAR-related lipid transfer (START) domain containing 7 mRNA (cDNA clone MGC:16334 IMAGE:3842611) complete cds. // gb // 11 // --- /// BC012793 // Homo sapiens StAR-related lipid transfer (START) domain containing 7 mRNA (cDNA clone MGC:16560 IMAGE:4080200) complete cds. // gb // 11 // --- /// BC013279 // Homo sapiens StAR-related lipid transfer (START) domain containing 7 mRNA (cDNA clone MGC:16266 IMAGE:3830320) complete cds. // gb // 11 // --- /// BC014076 // Homo sa
piens StAR-related lipid transfer (START) domain containing 7 mRNA (cDNA clone MGC:20300 IMAGE:4127007) complete cds. // gb // 11 // --- /// BC014274 // Homo sapiens StAR-related lipid transfer (START) domain containing 7 mRNA (cDNA clone MGC:10691 IMAGE:3677198) complete cds. // gb // 11 // --- /// BC032106 // Homo sapiens StAR-related lipid transfer (START) domain containing 7 mRNA (cDNA clone MGC:23321 IMAGE:4643387) complete cds. // gb // 11 // --- /// ENST00000337288 // cdna:known chromosome:GRCh37:2:96850597:96874556:-1 gene:ENSG00000084090 gene_biotype:protein_coding transcript_biotype:protein_coding // ensembl // 11 // --- /// ENST00000479456 // cdna:known chromosome:GRCh37:2:96850605:96853855:-1 gene:ENSG00000084090 gene_biotype:protein_coding transcript_biotype:retained_intron // ensembl // 11 // --- /// NM_020151 // Homo sapiens StAR-related lipid transfer (START) domain containing 7 (STARD7) mRNA. // refseq // 11 // ---,---
Added: SwiftApps/swift-galaxy/swift/lungsearch/egsearch.swift
===================================================================
--- SwiftApps/swift-galaxy/swift/lungsearch/egsearch.swift (rev 0)
+++ SwiftApps/swift-galaxy/swift/lungsearch/egsearch.swift 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,31 @@
+type file;
+
+app (file searchOut, file out) esearch (file wrapper, file pyscript, int numSlices, int sliceNumber, file inp1, file inp2) {
+ bash @wrapper @pyscript numSlices sliceNumber @searchOut stdout=@out;
+}
+
+app (file joinOut) join ( string dir, file segment[]) {
+ join dir @joinOut 2 ;
+}
+
+main()
+{
+ string outDir = @arg("dir","./out");
+ int numSlices = @toInt(@arg("numSlices","100000"));
+ int firstSlice = @toInt(@arg("firstSlice","0"));
+ int lastSlice = @toInt(@arg("lastSlice","1"));
+ file dict <"./HG-U133A_2.na33.annot.csv">;
+ file results <"./Consortium_expr_full_pheno_no_affx.csv">;
+ file pyscript <"./exsearch.py">;
+ file wrapper <"./wrapper.sh">;
+ file segments[];
+
+ foreach s, i in [firstSlice:lastSlice] {
+ file f<single_file_mapper; file=@strcat(outDir,"/s.",i,".csv")>;
+ file o<single_file_mapper; file=@strcat(outDir,"/s.",i,".out")>;
+ (f,o) = esearch(wrapper, pyscript, numSlices, s, dict, results);
+ segments[i] = f;
+ }
+}
+
+main();
Added: SwiftApps/swift-galaxy/swift/lungsearch/exsearch.py
===================================================================
--- SwiftApps/swift-galaxy/swift/lungsearch/exsearch.py (rev 0)
+++ SwiftApps/swift-galaxy/swift/lungsearch/exsearch.py 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,401 @@
+#! /usr/bin/env python
+'''
+Sam Volchenboum
+
+Loads in CSV with data in rows.
+First row are headers.
+data file is <results_filename>
+Rows zero to <data_row_start> are phenotype information.
+<rank> designates whether or not to perform a T-test on the data and rank the features.
+If <rank> is not False, then it should be a number. This is the number of top/bottom rows to take from the sorted list (i.e. most positive and most negative)
+If <rank> is False, then all data will be used, unranked. This will take a long, long time.
+<combos_to_test> are the numbers of features to group together.
+For instance, if the features are [a,b,c,d,e] and <combos_to_test> is [1,2] then the groups will be [a,b,c,d,e,ab,ac,ad,ae,bc,bd,be,cd,ce,de] and so forth.
+If <print_to_screen> is True, then output will include the classifiers that are highest ranked as well as the raw data for each to be copied and pasted into a graphing program
+If <save_data> = True, will write all points for classification rate better than <save_rank>
+If <save_data> = False, will write nothing for classification rate less than <save_rank>
+<library_name> = annotation file from Affymetrix
+
+Usage notes: python exsearch.py 100 10 aout -Scott 05/30/2013 skrieder at iit.edu
+'''
+import warnings
+warnings.filterwarnings("ignore", category=RuntimeWarning)
+import time
+#import pylab as pl
+import numpy as np
+import os
+
+#from sklearn.linear_model import LogisticRegression
+from sklearn.svm import SVC
+#from sklearn import datasets
+from sklearn.preprocessing import scale
+#from itertools import izip
+from itertools import combinations, islice
+from scipy.stats import tmean, ttest_ind
+#from numpy import std
+#from random import randint
+from math import factorial, ceil
+from operator import itemgetter, attrgetter
+import sys
+
+# DD = [[1,22000],[4,22000],[3,22000],[2,22000]]
+# #DD = [[5,20]]
+# for D in DD:
+# Y = D[0]
+# X = D[1] * 2
+# total = factorial((X)) / (factorial(X - Y) * factorial(Y) )
+# print X,Y,total
+#
+# exit()
+
+def write_file(output_file, filename, directory='.', add_cr = True):
+ '''Writes output_file to filename'''
+ newfile = open(filename, "w")
+ for a in output_file:
+ if (add_cr == True):
+ newfile.write(a+"\n")
+ else:
+ newfile.write(a)
+ return
+
+def readfile(name_of_file, directory=".", cr = 1):
+ print "Loading "+name_of_file+"..."
+ #
+ # print "NAME",name_of_file, type(name_of_file)
+ # print "DIR",directory, type(directory)
+ #
+ file_data = open(directory+"/"+name_of_file)
+ file_contents = file_data.readlines()
+ output = []
+ for i,line in enumerate(file_contents):
+ if (i <> len(file_contents)-1): # no CR on last line, apparently
+ output.append(line[:(-1* cr)]) # strip carriage returns
+ else:
+ output.append(line)
+ return output
+
+def load_data(filename,f,r): #r = starting row for the data
+ D = readfile(results_filename,f)
+ D = [a.replace('\r','').split(',') for a in D]
+ D = D[0:r] + [[a[0]] + [float(b) for b in a[1:]] for a in D[r:]]
+ return D
+
+def ranktest(D,training_labels,r):
+ # set up comparison test for the two groups
+ # assumes two groups are [0,1]
+ for line in D[r:]: # row one is sample names, row two is classes
+ S1 = [float(line[x+1]) for x,a in enumerate(training_labels) if a == 0]
+ S2 = [float(line[x+1]) for x,a in enumerate(training_labels) if a == 1]
+ T = ttest_ind(S1,S2)
+ line.append(T[0])
+
+ D[r:] = sorted(D[r:], key=itemgetter(-1), reverse=True) # sort by value of T-test positive to negative
+ D = D[:r] + D[r:r+rank] + D[-1 * rank:] # rank is a number. keep the top and bottom "rank" number of samples
+ D[r:] = sorted(D[r:], key = lambda x: abs(x[-1]), reverse=True) # sorts by absolute value of T-test
+ D = D[:r] + [a[1] + [a[0]+1] for a in enumerate(D[r:])] # numbers each one at end
+ D[r:] = sorted(D[r:], key=itemgetter(-2), reverse=True) # sorts again by relative value of t-test
+ return D
+
+def test_combos(d,training_labels,r):
+ # going to test each line in D against every other
+ D = d[r:]
+ max_class = 50.0 # starting baseline for classification
+ output = []
+ print "There are",len(D),"features."
+ if print_to_screen:
+ for line in d[0][1:]:
+ print line
+ print
+ print
+ for line in training_labels:
+ print line
+ print
+ print
+
+ FOX = ['202580_x_at', 8.92, 7.59, 6.72, 6.18, 7.11, 8.4, 7.87, 6.87, 6.34, 6.17, 6.52, 6.84, 7.01, 7.54, 6.4, 6.88, 7.14, 7.04, 6.68, 6.95, 6.9, 6.76, 6.35, 7.65, 6.55, 8.21, 6.68, 7.25, 7.07, 6.65, 8.15, 6.62, 9.21, 6.8, 7.68, 6.9, 6.66, 6.32, 7.54, 6.17, 6.5, 8.24, 7.56, 7.18, 8.24, 6.67, 6.83, 7.69, 7.93, 7.29, 6.44, 6.44, 7.15, 7.51, 6.08, 6.41, 5.69, 7.14, 7.54, 7.55, 6.96, 6.43, 6.15, 8.68, 7.36, 8.88, 7.04, 6.21, 2.2983938427111705, 794]
+
+ for combo in combos_to_test:
+ print
+ print "Taking",combo,"at a time."
+ groups = combinations(D,combo)
+ #
+ # number of groups will be
+ #
+ # n!
+ # ----------
+ # (n-r)! r!
+ #
+ # n = number of features
+ # r = number chosen
+ # assumes orer not important and no repetition allowed
+ # http://www.mathsisfun.com/combinatorics/combinations-permutations-calculator.html
+ #
+ #
+
+
+
+
+
+ total = factorial((len(D))) / (factorial(len(D) - combo) * factorial(combo) )
+ print "Total combinations\t",total
+ print "Taking at a time\t",combo
+
+ numSlices = int(sys.argv[1])
+ sliceNumber = int(sys.argv[2])
+ outFileName = sys.argv[3]
+
+ iterPerGroup = int(ceil(float(total)/float(numSlices)))
+ firstIter = sliceNumber * iterPerGroup
+
+ print "Number of slices\t", numSlices
+ print "Slice number\t\t",sliceNumber
+ print "Iterations per group\t", iterPerGroup
+ print "First iteration\t\t", firstIter
+ print "Last iteration\t\t", firstIter+iterPerGroup
+ print "outFileName\t\t", outFileName
+ print
+
+ slices = [ islice(groups,firstIter,firstIter+iterPerGroup) ]
+ for slice_number,S in enumerate(slices): # FIXME: eiminate this loop
+ output = []
+ counter = 0
+ for group in groups:
+ #group = [a for a in group] + [FOX] # for adding FOXM1
+
+ # for line in group:
+ # print line
+ # print len(line)
+ # print
+ # exit()
+
+ if counter%10000 == 0: print counter
+ counter += 1
+
+ if rank:
+ sym = [a[0]+" , "+lib[a[0]][7]+" , "+lib[a[0]][8]+" , "+str(a[-1]) for a in group]
+ lines = [[float(a) for a in b[1:-2]] for b in group] # remove the t-test and rank
+
+ # print sym
+ # for line in lines:
+ # print line
+ # print len(line)
+ # print
+ # exit()
+ #
+
+ else:
+ sym = [a[0]+" , "+lib[a[0]][7]+" , "+lib[a[0]][8] for a in group]
+ lines = [[float(a) for a in b[1:]] for b in group]
+ training_data = zip(*lines)
+ X = np.array(training_data)
+ X = scale(X)
+ Y = np.array(training_labels)
+
+ n_features = X.shape[1]
+ C = 1.0
+ name = 'Linear SVC'
+ clf = SVC(kernel='linear', C=C, probability=True)
+ clf.fit(X, Y)
+ y_pred = clf.predict(X)
+ classif_rate = np.mean(y_pred.ravel() == Y.ravel()) * 100
+
+ # if classif_rate > 80 and '202580_x_at' in [a.split(',')[0].replace(' ','') for a in sym]:
+ # print classif_rate, sym
+
+ if classif_rate > 89:
+ print classif_rate, sym
+
+ # print sym
+ # if 'ARNTL2' in sym:
+ # print sym, classif_rate
+
+ if print_to_screen and classif_rate > max_class: # keep track of the best combo so far...
+ points = [[a[n] for a in X] for n in range(combo)]
+ print sym,classif_rate
+ if print_to_screen == "points":
+ for P in points:
+ for p in P:
+ print p
+ print
+ print "-------------------------------------------------"
+ max_class = classif_rate
+ if classif_rate >= save_rank: # save all the data. If you want all data for everything, make save_data = True, and save_rank = 0
+ points = [[a[n] for a in X] for n in range(combo)] # the raw data to save later
+ #print points
+ #exit()
+ output.append([sym,classif_rate,points])
+ elif classif_rate < save_rank and save_data: #
+ output.append([sym,classif_rate]) # if save_data = False or 0, only save the features and rate - but not the data
+ elif save_data == False:
+ continue
+ output.sort(lambda x,y:cmp(y[1],x[1]))
+ #print "SUB",subname
+ #print "TYPE",type(working_folder),type(timestampe),type(subname)
+ # newfilename = working_folder + "/" + timestamp + "/" + outFileName
+ newfilename = outFileName
+ # print "NNAME",newfilename
+ # exit()
+ write_output(output,newfilename)
+ return output
+
+def write_output(output, filename):
+ #combos_to_test = [3]
+ d = ','
+
+
+ if rank:
+ leader = ['Probe','Name','Symbol','Rank']
+ else:
+ leader = ['Probe','Name','Symbol']
+
+ newout = [data_files, metrics, description] + [','.join(leader * max(combos_to_test)) + d + 'Classification' + d + (d.join(samples) + ", ,") * max(combos_to_test)] + [ d * (len(leader) * max(combos_to_test)) + "," + (d.join([str(a) for a in training_labels]) + ", ,") * max(combos_to_test)]
+
+ for line in output:
+ #print ','.join([','.join([str(c) for c in b]) + ',' for b in line[2]])
+ #exit()
+ if len(line) == 3:
+ newline = ','.join([a for a in line[0]]) + d * len(leader) * (max(combos_to_test) - len(line[0])) + d + str(line[1]) + d + ','.join([','.join([str(c) for c in b]) + ',' for b in line[2]])
+ else:
+ newline = ','.join([a for a in line[0]]) + d * len(leader) * (max(combos_to_test) - len(line[0])) + d + str(line[1])
+ newout.append(newline)
+
+ write_file(newout, filename, add_cr = True)
+ return
+
+def get_library(library,r):
+ # creates dictionary of probes and symbols
+ '''
+ 0 Probe Set ID
+ 1 Transcript ID(Array Design)
+ 2 Target Description
+ 3 Representative Public ID
+ 4 Archival UniGene Cluster
+ 5 UniGene ID
+ 6 Alignments
+ 7 Gene Title
+ 8 Gene Symbol
+ 9 Chromosomal Location
+ 10 Unigene Cluster Type
+ 11 Ensembl
+ 12 Entrez Gene
+ 13 SwissProt
+ 14 EC
+ 15 OMIM
+ 16 RefSeq Protein ID
+ 17 RefSeq Transcript ID
+ 18 Gene Ontology Biological Process
+ 19 Gene Ontology Cellular Component
+ 20 Gene Ontology Molecular Function
+ 21 Pathway
+ 22 InterPro
+ 23 Annotation Transcript Cluster
+ 24 Transcript Assignments
+ 25 Annotation Notes
+ '''
+
+ lib = readfile(library, r)
+ lib = [line.split(',') for line in lib]
+ lib_d = {}
+ for line in lib:
+ lib_d[line[0]] = line
+ return lib_d
+
+
+print_to_screen = False # True, False, "points"
+save_data = False # save all data, including data points, for classif_rate greater than save_rank below. If false, will record all data for above save rank and nothing for less than save rank.
+save_rank = 85.0 # cut-off for saving data. If 100, and save_data = True, will save only classification rate for everything. If 0.0 and True above, will write full data for every line
+# for example, save_data = True, save_rank = 80.0, will save all data for above 80% and only classitification rate for less than 80%
+# for example, save_data = False, save_rank = 80, will save all data for above 80% and nothing for less than 80%
+# if save_data = True, and save_rank = 100.0, will save rate only for everything. If rank = 0, will save all points for everything
+rank = 10 # can either be false or a number, in which case it is the number of top and bottom features to keep after t-test. False means no t-test, use all features
+combos_to_test = [2] # numbers of features to test. e,g, 1,2 means test all single gene and then all two gene combos
+data_row_start = 14 # data starts at this row
+#feature,feature_index,values = "Death",4,[0,1]
+
+
+library_name = 'HG-U133A_2.na33.annot.csv'
+working_folder = "./"
+lib = get_library(library_name,working_folder) # dictionary of probes and symbols
+timestamp = str(int(time.time()))
+if not os.path.isdir(working_folder + "/" + timestamp):
+ os.mkdir(working_folder + "/" + timestamp) # create output directory
+#results_filename = 'Lung_Cancer_Sample_Data.csv'
+results_filename = 'Consortium_expr_full_pheno_no_affx.csv'
+data = load_data(results_filename,working_folder,data_row_start)
+'''
+0 UniqueID
+1 histology
+2 had_adjuvant_chemo (TRUE/FALSE)
+3 recurrence
+4 TimetoRecurrence
+5 death
+6 overall_survival_months
+7 age
+8 gender
+9 stage.title
+10 dataset.id
+11 had_adjuvant_RT
+12 FirstProgressionOrRelapse
+13 TimetoFirstProgression
+'''
+
+
+# Here is the data selection section
+# clunky but works
+# choose elements from list above
+# metrics hard coded
+data_files = "Data source = " + library_name + ", library = " + library_name
+metrics = "Save rank = " + str(save_rank) + ", save_data = " + str(save_data) + ", rank = " + str(rank) + ", combos_to_test = " + str(combos_to_test)
+L = 24.0
+H = 48.0
+description = "Adjuvant chemotherapy, <" + str(L) + " months vs. > " + str(H) + " months"
+data_using = [[line[0]] + [a[1] for a in enumerate(line[1:]) if (data[2][a[0]+1] == 'FALSE' and data[6][a[0]+1] <> "NA") and (float(data[6][a[0]+1]) < L or float(data[6][a[0]+1]) > H)] for line in data]
+training_labels = [0 if float(a) < L else 1 for a in data_using[6][1:]]
+samples = [a for a in data_using[0][1:]]
+#print samples
+categories = [len([a for a in training_labels if a == 0]),len([a for a in training_labels if a == 1])]
+description = description + "_" + str(categories[0]) + "_" + str(categories[1]) + "_" + "Top " + str(rank)
+
+if print_to_screen:
+ print description
+
+if rank:
+ data = ranktest(data_using,training_labels,data_row_start)
+else:
+ data = data_using
+
+# combos_to_test = [1,2,3,4,5]
+# D = data
+# for combo in combos_to_test:
+# total = factorial((len(D))) / (factorial(len(D) - combo) * factorial(combo) )
+# print combo,total
+# exit()
+
+# <24 vs >48 = 794
+# <12 vs >24 = 10591
+# <12 vs >48 = 6998
+# <12 vs >60 = 8242
+# <6 vs >60 2108
+# <24 >24 1777
+# 24 36 1205
+# 12 36 8629
+#24 30 1900
+
+
+# test = '202580_x_at'
+# for line in data:
+# if line[0] == test:
+# print line
+# print
+# exit()
+
+
+# for i,line in enumerate(data):
+# print i,line
+# exit()
+output = test_combos(data, training_labels,data_row_start)
+#write_output(output)
+
+#exit()
+
+
Property changes on: SwiftApps/swift-galaxy/swift/lungsearch/exsearch.py
___________________________________________________________________
Added: svn:executable
+ *
Added: SwiftApps/swift-galaxy/swift/lungsearch/lungsearch.xml
===================================================================
--- SwiftApps/swift-galaxy/swift/lungsearch/lungsearch.xml (rev 0)
+++ SwiftApps/swift-galaxy/swift/lungsearch/lungsearch.xml 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,19 @@
+<tool id="lungsearch" name="Lungsearch: A Medical Application">
+ <description>Swift - Power Grid Inference for Stochastic Optimization </description>
+ <command interpreter="bash">
+ swift-lungsearch $site $lastslice $log_file
+ </command>
+ <inputs>
+ <param name="site" type="select" label="Execution Location">
+ <option value="midway">Midway</option>
+ <option value="uc3">UC3</option>
+ <option value="localhost">Localhost</option>
+ <option value="stampede">Stampede</option>
+ </param>
+ <param name="lastslice" type="text" value="5" label="value for last slice"/>
+ </inputs>
+ <outputs>
+ <data format="txt" type="data" name="log_file"/>
+ </outputs>
+</tool>
+
Added: SwiftApps/swift-galaxy/swift/lungsearch/midway.cdm
===================================================================
--- SwiftApps/swift-galaxy/swift/lungsearch/midway.cdm (rev 0)
+++ SwiftApps/swift-galaxy/swift/lungsearch/midway.cdm 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1 @@
+rule .*csv DIRECT /scratch/midway/maheshwari/swiftwork
Added: SwiftApps/swift-galaxy/swift/lungsearch/midway.cf
===================================================================
--- SwiftApps/swift-galaxy/swift/lungsearch/midway.cf (rev 0)
+++ SwiftApps/swift-galaxy/swift/lungsearch/midway.cf 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,8 @@
+use.provider.staging=true
+use.wrapper.staging=false
+wrapperlog.always.transfer=true
+execution.retries=0
+lazy.errors=false
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+tcp.port.range=50000,51000
Added: SwiftApps/swift-galaxy/swift/lungsearch/midway.xml
===================================================================
--- SwiftApps/swift-galaxy/swift/lungsearch/midway.xml (rev 0)
+++ SwiftApps/swift-galaxy/swift/lungsearch/midway.xml 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,46 @@
+<config>
+
+<pool handle="local">
+ <execution provider="local" />
+ <filesystem provider="local" />
+ <workdirectory>/scratch/local/swift</workdirectory>
+</pool>
+
+<pool handle="sandyb">
+ <execution provider="coaster" jobmanager="local:slurm"/>
+ <profile namespace="globus" key="jobsPerNode">12</profile>
+ <profile namespace="globus" key="ppn">12</profile>
+ <profile namespace="globus" key="slots">10</profile>
+ <profile namespace="globus" key="maxnodes">1</profile>
+ <profile namespace="globus" key="nodegranularity">1</profile>
+ <profile namespace="globus" key="queue">sandyb</profile>
+ <profile namespace="karajan" key="jobThrottle">4.00</profile> <!-- number of jobs / 100 -->
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="maxtime">28800</profile>
+ <profile namespace="globus" key="maxwalltime">00:20:00</profile>
+ <filesystem provider="local" url="none" />
+ <workdirectory>/scratch/midway/maheshwari/swiftwork</workdirectory>
+</pool>
+
+<pool handle="westmere">
+ <execution provider="coaster" jobmanager="local:slurm"/>
+ <profile namespace="globus" key="jobsPerNode">12</profile>
+ <profile namespace="globus" key="ppn">12</profile>
+ <profile namespace="globus" key="slots">10</profile>
+ <profile namespace="globus" key="maxnodes">1</profile>
+ <profile namespace="globus" key="nodegranularity">1</profile>
+ <profile namespace="globus" key="queue">westmere</profile>
+ <profile namespace="karajan" key="jobThrottle">4.00</profile> <!-- number of jobs / 100 -->
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="maxtime">28800</profile>
+ <profile namespace="globus" key="maxwalltime">00:20:00</profile>
+ <filesystem provider="local" url="none" />
+ <workdirectory>/scratch/midway/maheshwari/swiftwork</workdirectory>
+</pool>
+
+</config>
+
Added: SwiftApps/swift-galaxy/swift/lungsearch/swift-lungsearch
===================================================================
--- SwiftApps/swift-galaxy/swift/lungsearch/swift-lungsearch (rev 0)
+++ SwiftApps/swift-galaxy/swift/lungsearch/swift-lungsearch 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,280 @@
+#!/bin/bash
+
+site=$1
+lastslice=$2
+logfile=$3
+
+echo $@>>/tmp/tmp.txt
+#swift=/home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/swift
+swift=/home/maheshwari/swift-0.94/cog/modules/swift/dist/swift-svn/bin/swift
+
+# use here docs for configs
+cat << 'EOF' > /tmp/lungsearchgalaxy.swift
+type file;
+
+app (file searchOut, file out) esearch (file wrapper, file pyscript, int numSlices, int sliceNumber, file inp1, file inp2) {
+ bash @wrapper @pyscript numSlices sliceNumber @searchOut stdout=@out;
+}
+
+app (file joinOut) join ( string dir, file segment[]) {
+ join dir @joinOut 2 ;
+}
+
+main() {
+ string outDir = @arg("dir","./out");
+ int numSlices = @toInt(@arg("numSlices","100000"));
+ int firstSlice = @toInt(@arg("firstSlice","0"));
+ int lastSlice = @toInt(@arg("lastSlice","1"));
+ file dict <"./HG-U133A_2.na33.annot.csv">;
+ file results <"./Consortium_expr_full_pheno_no_affx.csv">;
+ file pyscript <"/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/lungsearch/exsearch.py">;
+ file wrapper <"/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/lungsearch/wrapper.sh">;
+ file segments[];
+
+ foreach s, i in [firstSlice:lastSlice] {
+ file f<single_file_mapper; file=@strcat(outDir,"/s.",i,".csv")>;
+ file o<single_file_mapper; file=@strcat(outDir,"/s.",i,".out")>;
+ (f,o) = esearch(wrapper, pyscript, numSlices, s, dict, results);
+ segments[i] = f;
+ }
+}
+
+main();
+EOF
+
+case "$site" in
+midway )
+cat << 'EOF' > /tmp/sites.xml
+<config>
+
+<pool handle="local">
+ <execution provider="local" />
+ <filesystem provider="local" />
+ <workdirectory>/scratch/local/swift</workdirectory>
+</pool>
+
+<pool handle="sandyb">
+ <execution provider="coaster" jobmanager="local:slurm"/>
+ <profile namespace="globus" key="jobsPerNode">12</profile>
+ <profile namespace="globus" key="ppn">12</profile>
+ <profile namespace="globus" key="slots">10</profile>
+ <profile namespace="globus" key="maxnodes">1</profile>
+ <profile namespace="globus" key="nodegranularity">1</profile>
+ <profile namespace="globus" key="queue">sandyb</profile>
+ <profile namespace="karajan" key="jobThrottle">4.00</profile> <!-- number of jobs / 100 -->
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="maxtime">28800</profile>
+ <profile namespace="globus" key="maxwalltime">00:20:00</profile>
+ <filesystem provider="local" url="none" />
+ <workdirectory>/scratch/midway/maheshwari/swiftwork</workdirectory>
+</pool>
+
+<pool handle="westmere">
+ <execution provider="coaster" jobmanager="local:slurm"/>
+ <profile namespace="globus" key="jobsPerNode">12</profile>
+ <profile namespace="globus" key="ppn">12</profile>
+ <profile namespace="globus" key="slots">10</profile>
+ <profile namespace="globus" key="maxnodes">1</profile>
+ <profile namespace="globus" key="nodegranularity">1</profile>
+ <profile namespace="globus" key="queue">westmere</profile>
+ <profile namespace="karajan" key="jobThrottle">4.00</profile> <!-- number of jobs / 100 -->
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="maxtime">28800</profile>
+ <profile namespace="globus" key="maxwalltime">00:20:00</profile>
+ <filesystem provider="local" url="none" />
+ <workdirectory>/scratch/midway/maheshwari/swiftwork</workdirectory>
+</pool>
+
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+uc3 bash /bin/bash null null null
+cluster bash /bin/bash null null null
+sandyb bash /bin/bash null null null
+westmere bash /bin/bash null null null
+beagle bash /bin/bash null null null
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+use.wrapper.staging=false
+wrapperlog.always.transfer=true
+execution.retries=0
+lazy.errors=false
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+tcp.port.range=50000,51000
+EOF
+
+cat << 'EOF' > /tmp/cdm
+rule .*csv DIRECT /scratch/midway/maheshwari/swiftwork
+EOF
+;;
+
+uc3 )
+cat << 'EOF' > /tmp/sites.xml
+<config>
+ <pool handle="uc3">
+ <execution provider="coaster" url="uc3-sub.uchicago.edu" jobmanager="ssh-cl:condor"/>
+ <!--<execution provider="coaster" jobmanager="local:condor"/>-->
+ <profile namespace="karajan" key="jobThrottle">.09</profile>
+ <profile namespace="karajan" key="initialScore">1000</profile>
+ <profile namespace="globus" key="jobsPerNode">1</profile>
+ <profile namespace="globus" key="maxWalltime">3600</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">1</profile>
+ <profile namespace="globus" key="condor.Requirements">UidDomain == "osg-gk.mwt2.org"</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="condor.+AccountingGroup">"group_friends.{env.USER}"</profile>
+ <profile namespace="globus" key="jobType">nonshared</profile>
+ <filesystem provider="local" url="none" />
+ <!--<workdirectory>/home/maheshwari/test/catsn/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ </pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+uc3 echo /bin/echo
+uc3 cat /bin/cat
+uc3 runampl run_ampl.py
+uc3 runampl_l run_ampl_l.py
+uc3 runampl_u run_ampl_u.py
+uc3 bash /bin/bash
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+stampede )
+cat << 'EOF' > /tmp/sites.xml
+<config>
+<pool handle="stampede">
+ <execution provider="coaster" jobmanager="gt2:gt2:slurm" url="login5.stampede.tacc.utexas.edu:2119/jobmanager-slurm"/>
+ <!--<execution provider="coaster" jobmanager="ssh-cl:slurm" url="stampede.tacc.utexas.edu"/>-->
+ <!--<filesystem provider="gsiftp" url="gsiftp://gridftp.stampede.tacc.utexas.edu:2811"/>-->
+ <filesystem provider="local"/>
+ <profile namespace="globus" key="jobsPerNode">16</profile>
+ <profile namespace="globus" key="ppn">16</profile>
+ <profile namespace="globus" key="project">TG-STA110005S</profile>
+ <profile namespace="globus" key="queue">normal</profile>
+ <profile namespace="globus" key="slurm.mail-user">ketancmaheshwari at gmail.com</profile>
+ <profile namespace="globus" key="slurm.mail-type">ALL</profile>
+ <profile namespace="globus" key="maxWalltime">02:00:00</profile>
+ <profile namespace="globus" key="maxTime">8000</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">1</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="karajan" key="jobThrottle">.15</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <workdirectory>/tmp/swift.work</workdirectory>
+</pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+stampede echo echo
+stampede cat cat
+stampede runampl run_ampl.py
+stampede runampl_l run_ampl_l.py
+stampede runampl_u run_ampl_u.py
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+localhost )
+cat << 'EOF' > /tmp/sites.xml
+<config>
+<pool handle="localhost">
+ <execution provider="local" />
+ <filesystem provider="local"/>
+ <!--<workdirectory>/home/kcm92/powergridapps/swiftscripts/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ <profile namespace="karajan" key="jobThrottle">0.2</profile>
+</pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+localhost echo echo
+localhost cat cat
+localhost bash /bin/bash
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=false
+wrapperlog.always.transfer=true
+execution.retries=0
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+use.wrapper.staging=false
+EOF
+;;
+
+* )
+echo "defaulting to localhost"
+cat << 'EOF' > /tmp/sites.xml
+<config>
+<pool handle="localhost">
+ <execution provider="local" />
+ <filesystem provider="local"/>
+ <!--<workdirectory>/home/kcm92/powergridapps/swiftscripts/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ <profile namespace="karajan" key="jobThrottle">0.31</profile>
+ </pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+localhost echo echo
+localhost cat cat
+localhost bash /bin/bash
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=false
+wrapperlog.always.transfer=true
+execution.retries=0
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+esac
+
+$swift -sites.file /tmp/sites.xml -tc.file /tmp/tc -config /tmp/cf -cdm.file /tmp/cdm /tmp/lungsearchgalaxy.swift -lastSlice=$lastslice 2> std.err
+#$swift -sites.file /tmp/sites.xml -tc.file /tmp/tc -config /tmp/cf /tmp/inference4galaxy.swift -batch=$batch -stochmodel=stochmodel.run -edrevised=edrevised.mod -asciidata=set_data_ascii.inc -printres=print_results_revised.inc -illinois=Illinois.tgz -wind_data=wind_data.dat 2> std.err
+
+EXITCODE=$?
+
+if [ "$EXITCODE" -ne "0" ]; then
+ cat std.err >&2
+fi
+cp std.err $logfile
+rm std.err
+exit $EXITCODE
Property changes on: SwiftApps/swift-galaxy/swift/lungsearch/swift-lungsearch
___________________________________________________________________
Added: svn:executable
+ *
Added: SwiftApps/swift-galaxy/swift/lungsearch/tc.data
===================================================================
--- SwiftApps/swift-galaxy/swift/lungsearch/tc.data (rev 0)
+++ SwiftApps/swift-galaxy/swift/lungsearch/tc.data 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,5 @@
+uc3 bash /bin/bash null null null
+cluster bash /bin/bash null null null
+sandyb bash /bin/bash null null null
+westmere bash /bin/bash null null null
+beagle bash /bin/bash null null null
Added: SwiftApps/swift-galaxy/swift/lungsearch/wrapper.sh
===================================================================
--- SwiftApps/swift-galaxy/swift/lungsearch/wrapper.sh (rev 0)
+++ SwiftApps/swift-galaxy/swift/lungsearch/wrapper.sh 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,49 @@
+#!/bin/bash
+
+set -x
+
+echo $HOSTNAME
+
+if [ `echo $HOSTNAME | grep "uc3"` ]
+then
+# UC3 Specific setup
+ echo "On UC3"
+ export PYTHONPATH=/cvmfs/uc3.uchicago.edu/groups/swift/lib/python2.7
+ export LD_LIBRARY_PATH=/cvmfs/uc3.uchicago.edu/groups/swift/lib:/cvmfs/uc3.uchicago.edu/groups/swift/lib64/atlas:/cvmfs/uc3.uchicago.edu/groups/swift/lib64
+ export PATH=/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin:/cvmfs/uc3.uchicago.edu/groups/swift/bin/
+ export PATH=/cvmfs/uc3.uchicago.edu/groups/swift/bin/:$PATH
+ ls -lah /mnt/hadoop/{env.USER}/*
+ ls -lah /mnt/hadoop/$USER/*
+#End UC3
+elif [ `echo $HOSTNAME | grep "beagle"` ]
+then
+# Beagle specific setup
+ echo "On Beagle"
+ export PYTHONPATH=/soft/python/2.7/2.7.3-vanilla/modules/scikit-learn/0.14/lib/python2.7/site-packages:/soft/python/2.7/2.7.3-vanilla/modules/scipy/0.12.0/lib/python2.7/site-packages:/soft/python/2.7/2.7.3-vanilla/modules/numpy/1.7.0/lib/python2.7/site-packages:/soft/python/2.7/2.7.3-vanilla/modules/scikit-learn/0.14/lib/python2.7/site-packages:/soft/python/2.7/2.7.3-vanilla/modules/scipy/0.12.0/lib/python2.7/site-packages:/soft/python/2.7/2.7.3-vanilla/modules/numpy/1.7.0/lib/python2.7/site-packages:/soft/python/2.7/2.7.3-vanilla/modules
+ export LD_LIBRARY_PATH=/soft/python/2.7/2.7.3-vanilla/python/lib:/opt/gcc/mpc/0.8.1/lib:/opt/gcc/mpfr/2.4.2/lib:/opt/gcc/gmp/4.3.2/lib:/opt/gcc/4.7.2/snos/lib64:/soft/torque/2.5.7/lib:/soft/ci/lib
+ export PATH=/soft/python/2.7/2.7.3-vanilla/python/bin:/soft/python/2.7/2.7.3-vanilla/virtualenvs/ober/bin:$PATH
+ #End Beagle
+elif [ `echo $HOSTNAME | grep "midway"` ]
+then
+# Midway specific setup
+ echo "On Midway : $HOSTNAME"
+ module load python;
+ # This is accessible to other users
+ export PYTHONPATH=/home/yadunand/scratch-midway/scikit-learn
+ export PYTHONPATH=$PYTHONPATH:/home/yadunand/python/scikit-learn
+# End Midway
+fi
+
+# Python ENV tests
+# which python;
+# python -c "import sklearn";
+# python -c "from sklearn.svm import SVC"
+
+# Platform independant script
+echo "Checking for the input files ";
+ls -lah;
+echo "Python script to execute : $1"
+echo "Executing.... python $1 $2 $3 $4"
+python $1 $2 $3 $4
+
+# Platform independent script ends
\ No newline at end of file
Property changes on: SwiftApps/swift-galaxy/swift/lungsearch/wrapper.sh
___________________________________________________________________
Added: svn:executable
+ *
Added: SwiftApps/swift-galaxy/swift/mysim.xml
===================================================================
--- SwiftApps/swift-galaxy/swift/mysim.xml (rev 0)
+++ SwiftApps/swift-galaxy/swift/mysim.xml 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,24 @@
+<tool id="mysim" name="mysim application">
+ <description>A Swift tool to run the mysim workflow</description>
+
+ <command interpreter="bash">
+ swift-mysim "$site" "$nsim" "$steps" "$range" "$vals" "$html_file.files_path" "$log_file" "$html_file"
+ </command>
+
+ <inputs>
+ <param name="site" type="select" label="Execution Location">
+ <option value="localhost">Localhost</option>
+ <option value="midway">Midway</option>
+ <option value="uc3">UC3</option>
+ <option value="stampede">Stampede</option>
+ </param>
+ <param name="nsim" type="text" value="10" label="Number of simulation tasks to run "/>
+ <param name="steps" type="text" value="1" label="Number of timesteps per simulation"/>
+ <param name="range" type="text" value="100" label="Range of the generated random numbers"/>
+ <param name="vals" type="text" value="10" label="Number of values generated per simulation"/>
+ </inputs>
+ <outputs>
+ <data format="txt" name="log_file" type="data" label="Swift output" />
+ <data format="html" name="html_file" label="mysimoutput.html" />
+ </outputs>
+</tool>
Added: SwiftApps/swift-galaxy/swift/plotswiftlogs
===================================================================
--- SwiftApps/swift-galaxy/swift/plotswiftlogs (rev 0)
+++ SwiftApps/swift-galaxy/swift/plotswiftlogs 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,97 @@
+#!/bin/bash
+
+#usage: ./extract4plots <swift.logfile>
+
+SWIFTLOGFILE=$1
+
+TMPDIR=`mktemp -d plotlog.XXX`
+
+grep -i ProgressTicker $SWIFTLOGFILE > $TMPDIR/swiftoutfile.out
+
+SWIFTOUTFILE=$TMPDIR/swiftoutfile.out
+
+#extract start time
+TMPDATE=`grep -i progress $SWIFTOUTFILE | head -n 1 | cut -f1-2 -d ' '`
+START_TIME=`date +%s -d "$TMPDATE"`
+
+#extract end time
+TMPDATE=`grep -i progress $SWIFTOUTFILE | tail -n 1 | cut -f1-2 -d ' '`
+END_TIME=`date +%s -d "$TMPDATE"`
+
+#duration
+DIFFTIME=$((END_TIME - START_TIME))
+
+#extract active runs in a file
+grep -o -i "Active:[0-9]*" $SWIFTOUTFILE | awk -F: '{print $2}' > $TMPDIR/active.txt
+
+#extract successful completions in a file
+grep -o -i "Successfully:[0-9]*" $SWIFTOUTFILE | awk -F: '{print $2}' > $TMPDIR/cumulative.txt
+
+#prepare tics
+activelines=`wc -l $TMPDIR/active.txt | awk '{print $1}'`
+cumulines=`wc -l $TMPDIR/cumulative.txt | awk '{print $1}'`
+
+activelinespertic=`echo "scale=5 ; $DIFFTIME / $activelines" | bc`
+seq 0 $activelinespertic $DIFFTIME > $TMPDIR/activetics.txt
+
+cumulinespertic=`echo "scale=5 ; $DIFFTIME / $cumulines" | bc`
+seq 0 $cumulinespertic $DIFFTIME > $TMPDIR/cumultics.txt
+
+#final plot data
+paste $TMPDIR/activetics.txt $TMPDIR/active.txt > $TMPDIR/plot_active.txt
+paste $TMPDIR/cumultics.txt $TMPDIR/cumulative.txt > $TMPDIR/plot_cumulative.txt
+
+cat << EOF > $TMPDIR/plotit.gp
+set terminal png enhanced
+#set term postscript eps enhanced
+#set terminal svg enhanced size 1000 1000
+#set style line 1 linecolor rgb "blue"
+set output "activeplot.png"
+set nokey
+set xlabel "Time in sec"
+set ylabel "number of active jobs"
+set title "Active jobs"
+#set xrange [110000:160000]
+plot "plot_active.txt" using 1:2 with line
+
+set output "cumulativeplot.png"
+#set xlabel "Time in seconds"
+set ylabel "number of completed jobs"
+set title "Cumulative jobs"
+plot "plot_cumulative.txt" using 1:2 with lines
+
+#set output "cumulativeplot-openmp.png"
+#set xlabel "Time in seconds"
+#set ylabel "number of completed jobs"
+#set title "Cumulative jobs"
+#plot "plot_cumulative.txt" using 1:($2*24) with lines
+
+#set output "scs_loss.png"
+#set title "SciColSim evolution loss Results"
+#set xlabel "Evolution"
+#set ylabel "Value of loss(AR)"
+#plot "anneal.data" using 1 with lines
+
+#set output "multiloss.png"
+#set title "SciColSim evolution loss Results"
+#set key auto
+#set yrange [0:200]
+#set xlabel "Evolution"
+#set ylabel "loss"
+#plot "multiloss.txt" using 3 with lines title "multiloss mean val", "multiloss.txt" using ($3+$4) with lines title "+stddev", "multiloss.txt" using ($3-$4) with lines title "-stddev"
+EOF
+
+cd $TMPDIR
+
+gnuplot plotit.gp
+cp *.png ../
+
+cd ..
+
+#scicolsim specific
+#grep "T =" $SWIFTOUTFILE | awk '{print $6}' | cut -c8- | sed 's/....$//' > T.data
+
+#grep multi_annealing $SWIFTOUTFILE | grep "1;30" | awk '{print $3}' | cut -c11- | sed 's/....$//' > anneal.data
+
+#grep returning $SWIFTOUTFILE | awk '{print $3, $4, $5, $6}' | sed -e 's/'ci='//' -e 's/'cj='//' -e 's/'r.loss='//' -e 's/'r.sdev='//' | sort -t' ' -k 1,2n > multiloss.txt
+
Property changes on: SwiftApps/swift-galaxy/swift/plotswiftlogs
___________________________________________________________________
Added: svn:executable
+ *
Added: SwiftApps/swift-galaxy/swift/powergrid.xml
===================================================================
--- SwiftApps/swift-galaxy/swift/powergrid.xml (rev 0)
+++ SwiftApps/swift-galaxy/swift/powergrid.xml 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,32 @@
+<tool id="powergrid" name="Swift - Power Grid Inference for Stochastic Optimization">
+ <description>Swift - Power Grid Inference for Stochastic Optimization </description>
+
+ <command interpreter="bash">
+ swift-powergrid $site $batch $log_file
+ </command>
+
+ <inputs>
+ <param name="site" type="select" label="Execution Location">
+ <option value="midway">Midway</option>
+ <option value="uc3">UC3</option>
+ <option value="localhost">Localhost</option>
+ <option value="stampede">Stampede</option>
+ </param>
+ <param name="batch" type="text" value="20" label="value for batch size"/>
+
+<!--
+ <param name="stochmodel" type="data" label="stochmodel"/>
+ <param name="edrevised" type="data" label="edrevised"/>
+ <param name="asciidata" type="data" label="ascii data "/>
+ <param name="printres" type="data" label="print res inc file"/>
+ <param name="illinois" type="data" label="Illinois data file"/>
+ <param name="wind_data" type="data" label="wind data file"/>
+ -->
+ </inputs>
+
+ <outputs>
+ <data format="txt" type="data" name="log_file"/>
+ </outputs>
+
+</tool>
+
Added: SwiftApps/swift-galaxy/swift/print_results_revised.inc
===================================================================
--- SwiftApps/swift-galaxy/swift/print_results_revised.inc (rev 0)
+++ SwiftApps/swift-galaxy/swift/print_results_revised.inc 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,13 @@
+# print results for analysis
+# V. M. Zavala - MCS/ANL 2010
+
+for{s in SCEN}{
+printf{t in 1..TH}: "%e ", pricehis[s,t] > Results/lmp_results.dat;
+printf "\n " > Results/lmp_results.dat;
+}
+close Results/lmp_results.dat;
+
+# print results for inference app
+ printf: "%e ", cost > stoch_model_obj.out; close stoch_model_obj.out;
+printf{t in TESTTIME,j in GEN}: "%e ", yuc[t,j] > stoch_model_x.out;
+printf{j in GEN}: "%e ", Pgen_initial[j] > stoch_model_x.out; close stoch_model_x.out;
Property changes on: SwiftApps/swift-galaxy/swift/print_results_revised.inc
___________________________________________________________________
Added: svn:executable
+ *
Added: SwiftApps/swift-galaxy/swift/set_data_ascii.inc
===================================================================
--- SwiftApps/swift-galaxy/swift/set_data_ascii.inc (rev 0)
+++ SwiftApps/swift-galaxy/swift/set_data_ascii.inc 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,65 @@
+# set ampl model data
+# V. M. Zavala - MCS/ANL 2012
+
+# read line data
+table Lines_data IN "./Illinois/Lines_data.tab":
+LIN <- [LIN], status, snd_bus, rec_bus, X, V, Pmax, install_cost;
+read table Lines_data;
+
+# read bus data
+table bus_data IN "./Illinois/bus_data.tab":
+BUS <- [BUS], lat_bus, lon_bus;
+read table bus_data;
+
+# read generator data
+table Gen_data IN "./Illinois/Gen_data.tab":
+GEN <- [GEN], bus_gen, np_cap, sum_cap, win_cap, min_cap, fuel, min_hrate,
+ min_power, max_ur, max_dr, lat_gen, lon_gen;
+read table Gen_data;
+
+# dispatch horizon data
+read TH < "./Illinois/dispatch_data.dat";
+read T < "./Illinois/dispatch_data.dat";
+close "./Illinois/dispatch_data.dat";
+
+# python interface
+read NS < "stoch_model_par.in";
+read fix_x < "stoch_model_par.in";
+close "stoch_model_par.in";
+
+# read fuel data
+table fuel_data IN "./Illinois/fuel_data.tab":
+FUEL <- [FUEL], Description, HV, Unitprice, Units;
+read table fuel_data;
+
+# read load data
+table time_load IN "./Illinois/time_load.tab": TIME <- [TIME];
+read table time_load;
+
+table load_load IN "./Illinois/load_load.tab": LOAD <- [LOAD], bus_load;
+read table load_load;
+
+#table testtime_load IN "./Illinois/testtime_load.tab": TESTTIME <- [TESTTIME];
+#read table testtime_load;
+
+read{i in TIME,j in LOAD} loads[i,j] < "./Illinois/Loads.dat";
+close Illinois/Loads.dat;
+
+# initialize initial conditions for generators
+let{i in GEN} Pgen_init[i] := 0;
+
+# compute generation costs ($/MW)
+let{i in GEN} gen_cost[i] := 1e-3*(min_hrate[i]/HV[fuel[i]])*Unitprice[fuel[i]];
+
+# -------------- wind information
+table wind_data IN "./Illinois/wind_data.tab":
+WIND <- [WIND], bus_wind, wind_share;
+read table wind_data;
+
+# from inference app
+read{s in SCEN, t in TIME} wind_total[s,t] < "stoch_model_w.in";
+close stoch_model_w.in;
+
+# initialize wind info for moving horizon
+let{s in SCEN,t in TESTTIME} wind_totalmh[s,t]:= wind_total[s,t+1];
+
Property changes on: SwiftApps/swift-galaxy/swift/set_data_ascii.inc
___________________________________________________________________
Added: svn:executable
+ *
Added: SwiftApps/swift-galaxy/swift/sites.xml
===================================================================
--- SwiftApps/swift-galaxy/swift/sites.xml (rev 0)
+++ SwiftApps/swift-galaxy/swift/sites.xml 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,139 @@
+<config>
+
+<!-- sites.xml specifies details of the sites that Swift can run on.
+
+The first entry entry, for localhost, should work on most linux-like systems
+without any change.
+
+It may be necessary to change the two occurences of /var/tmp to a different
+working directory.
+
+The jobThrottle profile is set to 0 so that Swift will not try to run more
+than two jobs at once (the minimum) when using the local sites. This is
+appropriate for local execution, but make sure if/when using another
+execution mechanism to submit to an HPC resource that this jobThrottle
+is removed.
+
+-->
+
+
+ <pool handle="localhost">
+ <filesystem provider="local" />
+ <execution provider="local" />
+ <workdirectory>/tmp/swift.workdir</workdirectory>
+ <profile namespace="karajan" key="jobThrottle">0</profile>
+ </pool>
+
+<!-- The remainder of this file is commented out by default. It contains
+example site definitions for a number of sites on TeraGrid and OSG.
+
+How this list was constructed:
+
+1. Teragrid
+http://www.teragrid.org/userinfo/hardware/resources.php
+fill out the gatekeeper info and the gridftp hostname
+for the storage/workspace, login into the machine, and make yourself a
+temporary directory
+
+2. OSG
+http://osg-cat.grid.iu.edu/index.php?site_name=osgcat
+sort by CPUs
+Add the gatekeeper hostname into the jobmanager name and into the gridftp url
+Add the ($TMP) or ($WNTMP) to the storage element in the gridftp url AND
+into the workspace element
+
+TODO by user:
+customize the storage and workdirectory to use your personal working directories
+
+-->
+
+
+<!--
+ <pool handle="skynet" >
+ <gridftp url="gsiftp://skynet-login.isi.edu" >
+ </gridftp>
+ <jobmanager universe="vanilla" url="skynet-login.isi.edu/jobmanager-fork" major="2" />
+ <workdirectory >/nfs/scratch01/tiberius</workdirectory>
+ </pool>
+-->
+<!--
+ <pool handle="teraport" >
+ <gridftp url="gsiftp://tp-grid1.uchicago.edu" />
+ <jobmanager universe="vanilla" url="tp-grid1.uchicago.edu/jobmanager-pbs" major="2" />
+ <workdirectory >/home/tiberius/scratch/SWIFT-WORK</workdirectory>
+ </pool>
+-->
+<!--
+<pool handle="ncsa_32" >
+ <gridftp url="gsiftp://login-w.ncsa.teragrid.org" />
+ <jobmanager universe="vanilla" url="grid-w.ncsa.teragrid.org/jobmanager" major="2" />
+ <workdirectory >/u/ac/tstef</workdirectory>
+</pool>
+-->
+<!--
+<pool handle="purdue" >
+ <gridftp url="gsiftp://tg-data.purdue.teragrid.org" />
+ <jobmanager universe="vanilla" url="tg-gatekeeper.purdue.teragrid.org" major="2" />
+ <workdirectory >/scratch/teragrid/stef</workdirectory>
+</pool>
+-->
+<!--
+<pool handle="tacc" >
+ <gridftp url="gsiftp://tg-gridftp.lonestar.tacc.teragrid.org" />
+ <jobmanager universe="vanilla" url="tg-login.tacc.teragrid.org/jobmanager-lsf" major="2" />
+ <workdirectory >/work/teragrid/tstef</workdirectory>
+</pool>
+-->
+<!--
+<pool handle="UC" >
+ <gridftp url="gsiftp://tg-gridftp.uc.teragrid.org" />
+ <execution provider="gt4" jobmanager="PBS" url="tg-grid.uc.teragrid.org" />
+ <workdirectory >/disks/scratchgpfs1/tstef</workdirectory>
+</pool>
+ -->
+
+<!-- OSG SITES -->
+<!--
+<pool handle="OSG_LIGO_PSU" >
+ <gridftp url="gsiftp://grid3.aset.psu.edu" />
+ <jobmanager universe="vanilla" url="grid3.aset.psu.edu/jobmanager-pbs" major="2" />
+ <workdirectory >/usr1/grid3/data</workdirectory>
+</pool>
+ -->
+<!--
+<pool handle="fnal" >
+ <gridftp url="gsiftp://fngp-osg.fnal.gov" />
+ <jobmanager universe="vanilla" url="fngp-osg.fnal.gov/jobmanager-pbs" major="2" minor="2" />
+ <workdirectory >/grid/data</workdirectory>
+</pool>
+-->
+<!--
+<pool handle="prod_slac" >
+ <gridftp url="gsiftp://osgserv01.slac.stanford.edu" />
+ <jobmanager universe="vanilla" url="osgserv01.slac.stanford.edu/jobmanager-lsf" major="2" />
+ <workdirectory >/nfs/slac/g/grid/osg/data</workdirectory>
+</pool>
+-->
+<!--
+<pool handle="bnl_atlas_2" >
+ <gridftp url="gsiftp://gridgk02.racf.bnl.gov" />
+ <jobmanager universe="vanilla" url="gridgk02.racf.bnl.gov/jobmanager-condor" major="2" />
+ <workdirectory >/usatlas/prodjob/share/</workdirectory>
+</pool>
+-->
+<!--
+<pool handle="unm_hpc" >
+ <gridftp url="gsiftp://milta.alliance.unm.edu" />
+ <jobmanager universe="vanilla" url="milta.alliance.unm.edu/jobmanager-pbs" major="2" />
+ <workdirectory >/tmp</workdirectory>
+</pool>
+-->
+<!--
+<pool handle="UWM_CMS" >
+ <gridftp url="gsiftp://cmsgrid02.hep.wisc.edu" />
+ <jobmanager universe="vanilla" url="cmsgrid02.hep.wisc.edu/jobmanager-condor" major="2" />
+ <workdirectory >/tmp</workdirectory>
+</pool>
+-->
+
+</config>
Added: SwiftApps/swift-galaxy/swift/statswift.xml
===================================================================
--- SwiftApps/swift-galaxy/swift/statswift.xml (rev 0)
+++ SwiftApps/swift-galaxy/swift/statswift.xml 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,47 @@
+<tool id="stats" name="Swift stats app">
+ <description>A Swift tool to run stats on compute nodes</description>
+
+ <command interpreter="bash">
+ swift-stats "$site.site_select" "$n" "$html_file.files_path" "$log_file" "$html_file" "$site.walltime" "$site.slots" "$site.queue" "$site.nodes" "$site.throttle" "$site.workdir"
+ </command>
+ <inputs>
+ <param name="n" type="text" value="2" label="Number of tasks to run"/>
+
+ <conditional name="site">
+ <param name="site_select" type="select" label="Execution Location">
+ <option value="localhost">Localhost</option>
+ <option value="clusterPBS">PBS-Cluster</option>
+ <option value="clusterSLURM">SLURM-Cluster</option>
+ </param>
+
+ <when value="localhost">
+ <param name="walltime" type="hidden" value="00:10:00" label="Walltime in hh:mm:ss" />
+ <param name="slots" type="hidden" value="1" label="Number of scheduler jobs" />
+ <param name="queue" type="hidden" value="normal" label="Queue name" />
+ <param name="nodes" type="hidden" value="1" label="number of nodes per scheduler job" />
+ <param name="throttle" type="hidden" value="30" label="application wide degree of parallelism" />
+ <param name="workdir" type="hidden" value="/tmp/swift.workdir" label="application execution sanbox directory" />
+ </when>
+ <when value="clusterPBS">
+ <param name="walltime" type="text" value="00:10:00" label="Walltime in hh:mm:ss" />
+ <param name="slots" type="text" value="1" label="Number of scheduler jobs" />
+ <param name="queue" type="text" value="normal" label="Queue name" />
+ <param name="nodes" type="text" value="1" label="number of nodes per scheduler job" />
+ <param name="throttle" type="text" value="30" label="application wide degree of parallelism" />
+ <param name="workdir" type="text" value="/tmp/swift.workdir" label="application execution sanbox directory" />
+ </when>
+ <when value="clusterSLURM">
+ <param name="walltime" type="text" value="00:10:00" label="Walltime in hh:mm:ss" />
+ <param name="slots" type="text" value="1" label="Number of scheduler jobs" />
+ <param name="queue" type="text" value="normal" label="Queue name" />
+ <param name="nodes" type="text" value="1" label="number of nodes per scheduler job" />
+ <param name="throttle" type="text" value="30" label="application wide degree of parallelism" />
+ <param name="workdir" type="text" value="/tmp/swift.workdir" label="application execution sanbox directory" />
+ </when>
+ </conditional>
+ </inputs>
+ <outputs>
+ <data format="txt" name="log_file" type="data" label="Swift output" />
+ <data format="html" name="html_file" label="catsnoutput.html" />
+ </outputs>
+</tool>
Added: SwiftApps/swift-galaxy/swift/stochmodel.run
===================================================================
--- SwiftApps/swift-galaxy/swift/stochmodel.run (rev 0)
+++ SwiftApps/swift-galaxy/swift/stochmodel.run 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,69 @@
+# ampl driver file for unit commitment
+# V. M. Zavala - MCS/ANL 2012
+
+reset; model edrevised.mod;
+option presolve 0;
+option solver cbc;
+#option solver "/homes/ketan/cbc-2.2/2.2/bin/cbc";
+
+# set model data
+include set_data_ascii.inc;
+
+# assign reference bus
+let ref_bus := 22671;
+
+# initialize variables
+let{s in SCEN,t in TESTTIME, j in GEN} Pgen[s,t,j]:= np_cap[j]/2;
+let{t in TESTTIME, j in GEN} yuc[t,j]:= 1;
+let{s in SCEN,t in TESTTIME} slackp[s,t]:= 0;
+let{s in SCEN,t in TESTTIME} slackm[s,t]:= 0;
+
+# fix first-stage variables if requested (for inference app)
+if (fix_x == 1) then{
+read{t in TESTTIME,j in GEN} yuc[t,j] < stoch_model_x.in;
+read{j in GEN} Pgen_initial[j] < stoch_model_x.in;
+
+close stoch_model_x.in;
+
+fix{t in TESTTIME,j in GEN} yuc[t,j];
+ fix{j in GEN} Pgen_initial[j];
+}
+
+# data collection
+param pricehis{s in SCEN,t in 0..TH};
+param costhisf{t in 0..TH};
+param costhiss{s in SCEN,t in 0..TH};
+param genhis{s in SCEN,t in 0..TH, j in GEN};
+param Phis{s in SCEN,t in 0..TH, j in LIN};
+
+# start closed_loop
+let idx_data := 24*90;
+let idx_state := 0;
+
+for{idx_cl in 1..TH/T}{
+
+# assign data for current horizon
+let{s in SCEN,t in TESTTIME} wind_totalmh[s,t]:= wind_total[s,t+idx_data];
+fix{s in SCEN,t in TESTTIME, j in LOAD} Pload[s,t,j]:= loads[t+idx_data,j];
+
+# compare total wind production to load
+display wind_totalmh;
+
+# call solver
+solve;
+
+# collect results over simulation horizon
+let{s in SCEN,t in TESTTIME} pricehis[s,idx_state+t] := pfeq.dual[s,t];
+let{t in TESTTIME} costhisf[idx_state+t] := tot_start_cost[t];
+let{s in SCEN,t in TESTTIME} costhiss[s,idx_state+t] := tot_gen_cost[s,t];
+let{s in SCEN,t in TESTTIME,j in GEN} genhis[s,idx_state+t,j] := Pgen[s,t,j];
+
+# shift horizon and set new initial conditions
+let idx_data := idx_data + T;
+let idx_state := idx_state + T;
+
+}
+
+# print results
+include print_results_revised.inc;
+
Property changes on: SwiftApps/swift-galaxy/swift/stochmodel.run
___________________________________________________________________
Added: svn:executable
+ *
Added: SwiftApps/swift-galaxy/swift/swift-2stage
===================================================================
--- SwiftApps/swift-galaxy/swift/swift-2stage (rev 0)
+++ SwiftApps/swift-galaxy/swift/swift-2stage 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,319 @@
+#!/bin/bash
+
+site=$1
+data=$2
+n=$3
+outdir=$4
+logfile=$5
+htmlfile=$6
+mkdir -p $outdir
+echo $@ >> /tmp/args.txt
+
+swift=/home/maheshwari/swift-0.94/cog/modules/swift/dist/swift-svn/bin/swift
+# use "here" document for configs
+
+cat << EOF > /tmp/2stage.swift
+type file;
+type script;
+
+app (file o) s (file i) {
+ cat @i stdout=@o;
+}
+
+file out1[]<simple_mapper; location="$outdir", prefix="f1.",suffix=".txt">;
+file out2[]<simple_mapper; location="$outdir", prefix="f2.",suffix=".txt">;
+
+string d=@arg("data");
+
+foreach j in [1:@toInt(@arg("n","1"))] {
+ file data<single_file_mapper; file=d>;
+ out1[j] = s(data);
+ out2[j] = s(out1[j]);
+}
+EOF
+
+case "$site" in
+midway )
+cat << 'EOF' > /tmp/sites.xml
+<config>
+ <pool handle="midway">
+ <execution provider="coaster" jobmanager="local:slurm"/>
+ <profile namespace="globus" key="queue">sandyb</profile>
+ <profile namespace="globus" key="jobsPerNode">16</profile>
+ <profile namespace="globus" key="maxWalltime">02:00:00</profile>
+ <profile namespace="globus" key="maxTime">7500</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">2</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="karajan" key="jobThrottle">.31</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <workdirectory>/tmp/swift.work</workdirectory>
+ </pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+midway echo echo
+midway cat cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+uc3 )
+cat << 'EOF' > /tmp/sites.xml
+<config>
+ <pool handle="uc3">
+ <execution provider="coaster" url="uc3-sub.uchicago.edu" jobmanager="ssh-cl:condor"/>
+ <!--<execution provider="coaster" jobmanager="local:condor"/>-->
+ <profile namespace="karajan" key="jobThrottle">.09</profile>
+ <profile namespace="karajan" key="initialScore">1000</profile>
+ <profile namespace="globus" key="jobsPerNode">1</profile>
+ <profile namespace="globus" key="maxWalltime">3600</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">1</profile>
+ <profile namespace="globus" key="condor.Requirements">UidDomain == "osg-gk.mwt2.org"</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="condor.+AccountingGroup">"group_friends.{env.USER}"</profile>
+ <profile namespace="globus" key="jobType">nonshared</profile>
+ <filesystem provider="local" url="none" />
+ <!--<workdirectory>/home/maheshwari/test/catsn/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ </pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+uc3 echo /bin/echo
+uc3 cat /bin/cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+stampede )
+cat << 'EOF' > /tmp/sites.xml
+<config>
+<pool handle="stampede">
+ <execution provider="coaster" jobmanager="gt2:gt2:slurm" url="login5.stampede.tacc.utexas.edu:2119/jobmanager-slurm"/>
+ <!--<execution provider="coaster" jobmanager="ssh-cl:slurm" url="stampede.tacc.utexas.edu"/>-->
+ <!--<filesystem provider="gsiftp" url="gsiftp://gridftp.stampede.tacc.utexas.edu:2811"/>-->
+ <filesystem provider="local"/>
+ <profile namespace="globus" key="jobsPerNode">16</profile>
+ <profile namespace="globus" key="ppn">16</profile>
+ <profile namespace="globus" key="project">TG-STA110005S</profile>
+ <profile namespace="globus" key="queue">normal</profile>
+ <profile namespace="globus" key="slurm.mail-user">ketancmaheshwari at gmail.com</profile>
+ <profile namespace="globus" key="slurm.mail-type">ALL</profile>
+ <profile namespace="globus" key="maxWalltime">02:00:00</profile>
+ <profile namespace="globus" key="maxTime">8000</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">1</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="karajan" key="jobThrottle">.15</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <workdirectory>/tmp/swift.work</workdirectory>
+</pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+stampede echo echo
+stampede cat cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+localhost )
+cat << 'EOF' > /tmp/sites.xml
+<config>
+<pool handle="localhost">
+ <execution provider="coaster" jobmanager="local:local"/>
+ <filesystem provider="local"/>
+ <!--<workdirectory>/home/kcm92/powergridapps/swiftscripts/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ <profile namespace="karajan" key="jobThrottle">0.31</profile>
+</pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+localhost echo echo
+localhost cat cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=false
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+* )
+echo "defaulting to localhost"
+
+cat << 'EOF' > /tmp/sites.xml
+<config>
+<pool handle="localhost">
+ <execution provider="coaster" jobmanager="local:local"/>
+ <filesystem provider="local"/>
+ <!--<workdirectory>/home/kcm92/powergridapps/swiftscripts/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ <profile namespace="karajan" key="jobThrottle">0.31</profile>
+ </pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+localhost echo echo
+localhost cat cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=false
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+esac
+
+$swift -sites.file /tmp/sites.xml -tc.file /tmp/tc -config /tmp/cf /tmp/2stage.swift -n=$n -data=$data 2> std.err
+EXITCODE=$?
+
+swiftlog=`\ls -t *.log | head -1`
+
+#/tmp/plotswiftlogs $logfile 2>gnuplot.err
+
+cat << 'EOF' > /tmp/plotswiftlogs
+#!/bin/bash
+
+#usage: ./extract4plots <swift.logfile>
+
+SWIFTLOGFILE=$1
+#TMPDIR=`mktemp -d plotlog.XXX`
+grep -i ProgressTicker $SWIFTLOGFILE > swiftoutfile.out
+SWIFTOUTFILE=swiftoutfile.out
+#extract start time
+TMPDATE=`grep -i progress $SWIFTOUTFILE 2>/dev/null | head -n 1 | cut -f1-2 -d ' '`
+START_TIME=`date +%s -d "$TMPDATE"`
+
+#extract end time
+TMPDATE=`grep -i progress $SWIFTOUTFILE 2>/dev/null | tail -n 1 | cut -f1-2 -d ' '`
+END_TIME=`date +%s -d "$TMPDATE"`
+
+#duration
+DIFFTIME=$((END_TIME - START_TIME))
+#echo 0 > active.txt
+#echo 0 > cumulative.txt
+#extract active runs in a file
+(grep -o -i "Active:[0-9]*" $SWIFTOUTFILE 2>/dev/null | awk -F: '{print $2}' >> active.txt)
+
+#extract successful completions in a file
+(grep -o -i "Successfully:[0-9]*" $SWIFTOUTFILE 2>/dev/null | awk -F: '{print $2}' >> cumulative.txt)
+
+#prepare tics
+activelines=`wc -l active.txt | awk '{print $1}'`
+cumulines=`wc -l cumulative.txt | awk '{print $1}'`
+
+if [ $activelines -ne 0 ]
+then
+ activelinespertic=`echo "scale=5 ; $DIFFTIME / $activelines" | bc`
+fi
+seq 0 $activelinespertic $DIFFTIME > activetics.txt
+
+if [ $cumulines -ne 0 ]
+then
+ cumulinespertic=`echo "scale=5 ; $DIFFTIME / $cumulines" | bc`
+fi
+
+seq 0 $cumulinespertic $DIFFTIME > cumultics.txt
+
+#final plot data
+paste activetics.txt active.txt > plot_active.txt
+paste cumultics.txt cumulative.txt > plot_cumulative.txt
+
+cat << EOF1 > plotit.gp
+set terminal png enhanced
+set output "activeplot.png"
+set nokey
+set xlabel "Time in sec"
+set ylabel "number of active jobs"
+set title "Active jobs"
+plot "plot_active.txt" using 1:2 with line
+
+set output "cumulativeplot.png"
+set ylabel "number of completed jobs"
+set title "Cumulative jobs"
+plot "plot_cumulative.txt" using 1:2 with lines
+EOF1
+
+gnuplot plotit.gp 2>/dev/null
+
+#cp *.png ../
+echo `pwd`>/tmp/curdir
+echo `ls`>/tmp/dirlist
+#cd ..
+EOF
+
+sh /tmp/plotswiftlogs $swiftlog
+cp *.png $outdir/
+
+cat << EOF > $htmlfile
+<!DOCTYPE HTML>
+
+<html xmlns="http://www.w3.org/1999/xhtml">
+<head>
+ <title>2stage workflow output</title>
+</head>
+<body>
+<h2>Swift run trace plots</h2>
+
+<a href="activeplot.png" alt="active plot">active plot</a>
+<a href="cumulativeplot.png" alt="cumulative plot">cumulative plot</a>
+
+<h2>Browse output of 2stage application</h2>
+`for i in \`find $outdir -type f\`; do echo "<a href=\`basename $i\`>Output: \`basename $i\`</a><br/>"; done`
+</body>
+</html>
+EOF
+
+if [ "$EXITCODE" -ne "0" ]; then
+ cat std.err >&2
+fi
+cp std.err $logfile
+rm std.err
+exit $EXITCODE
Property changes on: SwiftApps/swift-galaxy/swift/swift-2stage
___________________________________________________________________
Added: svn:executable
+ *
Added: SwiftApps/swift-galaxy/swift/swift-3stage
===================================================================
--- SwiftApps/swift-galaxy/swift/swift-3stage (rev 0)
+++ SwiftApps/swift-galaxy/swift/swift-3stage 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,325 @@
+#!/bin/bash
+
+site=$1
+data=$2
+n=$3
+outdir=$4
+logfile=$5
+htmlfile=$6
+mkdir -p $outdir
+echo $@ >> /tmp/args.txt
+
+swift=/home/maheshwari/swift-0.94/cog/modules/swift/dist/swift-svn/bin/swift
+# use "here" document for configs
+
+cat << EOF > /tmp/2stage.swift
+type file;
+type script;
+
+app (file o) s (file i) {
+ cat @i stdout=@o;
+}
+
+file out1[]<simple_mapper; location="$outdir", prefix="f1.",suffix=".txt">;
+file out2[]<simple_mapper; location="$outdir", prefix="f2.",suffix=".txt">;
+
+string d=@arg("data");
+
+foreach j in [1:@toInt(@arg("n","1"))] {
+ file data<single_file_mapper; file=d>;
+ out1[j] = s(data);
+ out2[j] = s(out1[j]);
+}
+EOF
+
+case "$site" in
+midway )
+cat << 'EOF' > /tmp/sites.xml
+<config>
+ <pool handle="midway">
+ <execution provider="coaster" jobmanager="local:slurm"/>
+ <profile namespace="globus" key="queue">sandyb</profile>
+ <profile namespace="globus" key="jobsPerNode">16</profile>
+ <profile namespace="globus" key="maxWalltime">02:00:00</profile>
+ <profile namespace="globus" key="maxTime">7500</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">2</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="karajan" key="jobThrottle">.31</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <workdirectory>/tmp/swift.work</workdirectory>
+ </pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+midway echo echo
+midway cat cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+uc3 )
+cat << 'EOF' > /tmp/sites.xml
+<config>
+ <pool handle="uc3">
+ <execution provider="coaster" url="uc3-sub.uchicago.edu" jobmanager="ssh-cl:condor"/>
+ <!--<execution provider="coaster" jobmanager="local:condor"/>-->
+ <profile namespace="karajan" key="jobThrottle">.09</profile>
+ <profile namespace="karajan" key="initialScore">1000</profile>
+ <profile namespace="globus" key="jobsPerNode">1</profile>
+ <profile namespace="globus" key="maxWalltime">3600</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">1</profile>
+ <profile namespace="globus" key="condor.Requirements">UidDomain == "osg-gk.mwt2.org"</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="condor.+AccountingGroup">"group_friends.{env.USER}"</profile>
+ <profile namespace="globus" key="jobType">nonshared</profile>
+ <filesystem provider="local" url="none" />
+ <!--<workdirectory>/home/maheshwari/test/catsn/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ </pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+uc3 echo /bin/echo
+uc3 cat /bin/cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+stampede )
+cat << 'EOF' > /tmp/sites.xml
+<config>
+<pool handle="stampede">
+ <execution provider="coaster" jobmanager="gt2:gt2:slurm" url="login5.stampede.tacc.utexas.edu:2119/jobmanager-slurm"/>
+ <!--<execution provider="coaster" jobmanager="ssh-cl:slurm" url="stampede.tacc.utexas.edu"/>-->
+ <!--<filesystem provider="gsiftp" url="gsiftp://gridftp.stampede.tacc.utexas.edu:2811"/>-->
+ <filesystem provider="local"/>
+ <profile namespace="globus" key="jobsPerNode">16</profile>
+ <profile namespace="globus" key="ppn">16</profile>
+ <profile namespace="globus" key="project">TG-STA110005S</profile>
+ <profile namespace="globus" key="queue">normal</profile>
+ <profile namespace="globus" key="slurm.mail-user">ketancmaheshwari at gmail.com</profile>
+ <profile namespace="globus" key="slurm.mail-type">ALL</profile>
+ <profile namespace="globus" key="maxWalltime">02:00:00</profile>
+ <profile namespace="globus" key="maxTime">8000</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">1</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="karajan" key="jobThrottle">.15</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <workdirectory>/tmp/swift.work</workdirectory>
+</pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+stampede echo echo
+stampede cat cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+localhost )
+cat << 'EOF' > /tmp/sites.xml
+<config>
+<pool handle="localhost">
+ <execution provider="coaster" jobmanager="local:local"/>
+ <filesystem provider="local"/>
+ <!--<workdirectory>/home/kcm92/powergridapps/swiftscripts/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ <profile namespace="karajan" key="jobThrottle">0.31</profile>
+</pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+localhost echo echo
+localhost cat cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=false
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+* )
+echo "defaulting to localhost"
+
+cat << 'EOF' > /tmp/sites.xml
+<config>
+<pool handle="localhost">
+ <execution provider="coaster" jobmanager="local:local"/>
+ <filesystem provider="local"/>
+ <!--<workdirectory>/home/kcm92/powergridapps/swiftscripts/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ <profile namespace="karajan" key="jobThrottle">0.31</profile>
+ </pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+localhost echo echo
+localhost cat cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=false
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+esac
+
+$swift -sites.file /tmp/sites.xml -tc.file /tmp/tc -config /tmp/cf /tmp/2stage.swift -n=$n -data=$data 2> std.err
+EXITCODE=$?
+
+swiftlog=`\ls -t *.log | head -1`
+
+#/tmp/plotswiftlogs $logfile 2>gnuplot.err
+
+cat << 'EOF' > /tmp/plotswiftlogs
+#!/bin/bash
+
+#usage: ./extract4plots <swift.logfile>
+
+SWIFTLOGFILE=$1
+#TMPDIR=`mktemp -d plotlog.XXX`
+grep -i ProgressTicker $SWIFTLOGFILE > swiftoutfile.out
+SWIFTOUTFILE=swiftoutfile.out
+#extract start time
+TMPDATE=`grep -i progress $SWIFTOUTFILE 2>/dev/null | head -n 1 | cut -f1-2 -d ' '`
+START_TIME=`date +%s -d "$TMPDATE"`
+
+#extract end time
+TMPDATE=`grep -i progress $SWIFTOUTFILE 2>/dev/null | tail -n 1 | cut -f1-2 -d ' '`
+END_TIME=`date +%s -d "$TMPDATE"`
+
+#duration
+DIFFTIME=$((END_TIME - START_TIME))
+#echo 0 > active.txt
+#echo 0 > cumulative.txt
+#extract active runs in a file
+(grep -o -i "Active:[0-9]*" $SWIFTOUTFILE 2>/dev/null | awk -F: '{print $2}' > active.txt)
+
+#extract successful completions in a file
+(grep -o -i "Successfully:[0-9]*" $SWIFTOUTFILE 2>/dev/null | awk -F: '{print $2}' > cumulative.txt)
+
+#prepare tics
+activelines=`wc -l active.txt | awk '{print $1}'`
+cumulines=`wc -l cumulative.txt | awk '{print $1}'`
+
+if [ $activelines -ne 0 ]
+then
+ activelinespertic=`echo "scale=5 ; $DIFFTIME / $activelines" | bc`
+fi
+seq 0 $activelinespertic $DIFFTIME > activetics.txt
+
+if [ $cumulines -ne 0 ]
+then
+ cumulinespertic=`echo "scale=5 ; $DIFFTIME / $cumulines" | bc`
+fi
+
+seq 0 $cumulinespertic $DIFFTIME > cumultics.txt
+
+#final plot data
+paste activetics.txt active.txt > plot_active.txt
+paste cumultics.txt cumulative.txt > plot_cumulative.txt
+
+cat << EOF1 > plotit.gp
+set terminal png enhanced
+set output "activeplot.png"
+set nokey
+set xlabel "Time in sec"
+set ylabel "number of active jobs"
+set title "Active jobs"
+plot "plot_active.txt" using 1:2 with line
+
+set output "cumulativeplot.png"
+set ylabel "number of completed jobs"
+set title "Cumulative jobs"
+plot "plot_cumulative.txt" using 1:2 with lines
+EOF1
+
+gnuplot plotit.gp 2>/dev/null
+
+#cp *.png ../
+echo `pwd`>/tmp/curdir
+echo `ls`>/tmp/dirlist
+#cd ..
+EOF
+
+sh /tmp/plotswiftlogs $swiftlog
+cp *.png $outdir/
+
+#for i in `find $outdir`
+#do
+# lastfile=$i
+#done
+#bname=`basename $lastfile`
+
+cat << EOF > $htmlfile
+<!DOCTYPE HTML>
+
+<html xmlns="http://www.w3.org/1999/xhtml">
+<head>
+ <title>2stage workflow output</title>
+</head>
+<body>
+<h2>Swift run trace plots</h2>
+
+<a href="activeplot.png" alt="active plot">active plot</a>
+<a href="cumulativeplot.png" alt="cumulative plot">cumulative plot</a>
+
+<h2>Browse output of 2stage application</h2>
+`for i in \`find $outdir -type f\`; do echo "<a href=\`basename $i\`>Output: \`basename $i\`</a><br/>"; done`
+</body>
+</html>
+EOF
+
+if [ "$EXITCODE" -ne "0" ]; then
+ cat std.err >&2
+fi
+cp std.err $logfile
+rm std.err
+exit $EXITCODE
Property changes on: SwiftApps/swift-galaxy/swift/swift-3stage
___________________________________________________________________
Added: svn:executable
+ *
Added: SwiftApps/swift-galaxy/swift/swift-catsn
===================================================================
--- SwiftApps/swift-galaxy/swift/swift-catsn (rev 0)
+++ SwiftApps/swift-galaxy/swift/swift-catsn 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,328 @@
+#!/bin/bash
+
+#set -x
+set -e
+
+site=$1
+data=$2
+n=$3
+outdir=$4
+logfile=$5
+htmlfile=$6
+mkdir -p $outdir
+
+swift=`which swift`
+# use "here" document for configs
+
+cat << EOF > /tmp/catsn.swift
+type file;
+
+app (file o) cat (file i) {
+ cat @i stdout=@o;
+}
+#file out[]<simple_mapper; location="outdir", prefix="f.",suffix=".out">;
+file out[]<simple_mapper; location="$outdir", prefix="f.",suffix=".txt">;
+
+string d=@arg("data");
+
+foreach j in [1:@toInt(@arg("n","1"))] {
+ file data<single_file_mapper; file=d>;
+ out[j] = cat(data);
+}
+EOF
+
+case "$site" in
+midway )
+cat << 'EOF' > /tmp/sites.xml
+<?xml version="1.0" encoding="UTF-8"?>
+<config xmlns="http://www.ci.uchicago.edu/swift/SwiftSites">
+ <pool handle="midway">
+ <execution provider="coaster" jobmanager="local:slurm"/>
+ <profile namespace="globus" key="queue">sandyb</profile>
+ <profile namespace="globus" key="jobsPerNode">16</profile>
+ <profile namespace="globus" key="maxWalltime">02:00:00</profile>
+ <profile namespace="globus" key="maxTime">7500</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">2</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="karajan" key="jobThrottle">.31</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <workdirectory>/tmp/swift.work</workdirectory>
+ </pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+midway echo echo
+midway cat cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+uc3 )
+cat << 'EOF' > /tmp/sites.xml
+<?xml version="1.0" encoding="UTF-8"?>
+<config xmlns="http://www.ci.uchicago.edu/swift/SwiftSites">
+ <pool handle="uc3">
+ <execution provider="coaster" url="uc3-sub.uchicago.edu" jobmanager="ssh-cl:condor"/>
+ <!--<execution provider="coaster" jobmanager="local:condor"/>-->
+ <profile namespace="karajan" key="jobThrottle">.09</profile>
+ <profile namespace="karajan" key="initialScore">1000</profile>
+ <profile namespace="globus" key="jobsPerNode">1</profile>
+ <profile namespace="globus" key="maxWalltime">3600</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">1</profile>
+ <profile namespace="globus" key="condor.Requirements">UidDomain == "osg-gk.mwt2.org"</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="condor.+AccountingGroup">"group_friends.{env.USER}"</profile>
+ <profile namespace="globus" key="jobType">nonshared</profile>
+ <filesystem provider="local" url="none" />
+ <!--<workdirectory>/home/maheshwari/test/catsn/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ </pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+uc3 echo /bin/echo
+uc3 cat /bin/cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+stampede )
+cat << 'EOF' > /tmp/sites.xml
+<?xml version="1.0" encoding="UTF-8"?>
+<config xmlns="http://www.ci.uchicago.edu/swift/SwiftSites">
+<pool handle="stampede">
+ <execution provider="coaster" jobmanager="gt2:gt2:slurm" url="login5.stampede.tacc.utexas.edu:2119/jobmanager-slurm"/>
+ <!--<execution provider="coaster" jobmanager="ssh-cl:slurm" url="stampede.tacc.utexas.edu"/>-->
+ <!--<filesystem provider="gsiftp" url="gsiftp://gridftp.stampede.tacc.utexas.edu:2811"/>-->
+ <filesystem provider="local"/>
+ <profile namespace="globus" key="jobsPerNode">16</profile>
+ <profile namespace="globus" key="ppn">16</profile>
+ <profile namespace="globus" key="project">TG-STA110005S</profile>
+ <profile namespace="globus" key="queue">normal</profile>
+ <profile namespace="globus" key="slurm.mail-user">ketancmaheshwari at gmail.com</profile>
+ <profile namespace="globus" key="slurm.mail-type">ALL</profile>
+ <profile namespace="globus" key="maxWalltime">02:00:00</profile>
+ <profile namespace="globus" key="maxTime">8000</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">1</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="karajan" key="jobThrottle">.15</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <workdirectory>/tmp/swift.work</workdirectory>
+</pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+stampede echo echo
+stampede cat cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+localhost )
+cat << 'EOF' > /tmp/sites.xml
+<?xml version="1.0" encoding="UTF-8"?>
+<config xmlns="http://www.ci.uchicago.edu/swift/SwiftSites">
+<pool handle="localhost">
+ <execution provider="local" jobmanager="local:local"/>
+ <filesystem provider="local"/>
+ <!--<workdirectory>/home/kcm92/powergridapps/swiftscripts/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ <profile namespace="karajan" key="jobThrottle">0.31</profile>
+</pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+localhost echo echo
+localhost cat cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=false
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+* )
+echo "defaulting to localhost"
+
+cat << 'EOF' > /tmp/sites.xml
+<?xml version="1.0" encoding="UTF-8"?>
+<config xmlns="http://www.ci.uchicago.edu/swift/SwiftSites">
+<pool handle="localhost">
+ <execution provider="local" jobmanager="local:local"/>
+ <filesystem provider="local"/>
+ <!--<workdirectory>/home/kcm92/powergridapps/swiftscripts/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ <profile namespace="karajan" key="jobThrottle">0.31</profile>
+ </pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+localhost echo echo
+localhost cat cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=false
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+esac
+
+$swift -sites.file /tmp/sites.xml -tc.file /tmp/tc -config /tmp/cf /tmp/catsn.swift -n=$n -data=$data 2> std.err
+EXITCODE=$?
+
+swiftlog=`\ls -t *.log | head -1`
+
+#/tmp/plotswiftlogs $logfile 2>gnuplot.err
+cat << 'EOF' > /tmp/plotswiftlogs
+#!/bin/bash
+
+#usage: ./extract4plots <swift.logfile>
+
+SWIFTLOGFILE=$1
+#TMPDIR=`mktemp -d plotlog.XXX`
+grep -i ProgressTicker $SWIFTLOGFILE > swiftoutfile.out
+SWIFTOUTFILE=swiftoutfile.out
+#extract start time
+TMPDATE=`grep -i progress $SWIFTOUTFILE 2>/dev/null | head -n 1 | cut -f1-2 -d ' '`
+START_TIME=`date +%s -d "$TMPDATE"`
+
+#extract end time
+TMPDATE=`grep -i progress $SWIFTOUTFILE 2>/dev/null | tail -n 1 | cut -f1-2 -d ' '`
+END_TIME=`date +%s -d "$TMPDATE"`
+
+#duration
+DIFFTIME=$((END_TIME - START_TIME))
+#echo 0 > active.txt
+#echo 0 > cumulative.txt
+#extract active runs in a file
+(grep -o -i "Active:[0-9]*" $SWIFTOUTFILE 2>/dev/null | awk -F: '{print $2}' > active.txt)
+
+#extract successful completions in a file
+(grep -o -i "Successfully:[0-9]*" $SWIFTOUTFILE 2>/dev/null | awk -F: '{print $2}' > cumulative.txt)
+
+#prepare tics
+activelines=`wc -l active.txt | awk '{print $1}'`
+cumulines=`wc -l cumulative.txt | awk '{print $1}'`
+
+if [ $activelines -ne 0 ]
+then
+ activelinespertic=`echo "scale=5 ; $DIFFTIME / $activelines" | bc`
+fi
+seq 0 $activelinespertic $DIFFTIME > activetics.txt
+
+if [ $cumulines -ne 0 ]
+then
+ cumulinespertic=`echo "scale=5 ; $DIFFTIME / $cumulines" | bc`
+fi
+
+seq 0 $cumulinespertic $DIFFTIME > cumultics.txt
+
+#final plot data
+paste activetics.txt active.txt > plot_active.txt
+paste cumultics.txt cumulative.txt > plot_cumulative.txt
+
+cat << EOF1 > plotit.gp
+set terminal png enhanced
+set output "activeplot.png"
+set nokey
+set xlabel "Time in sec"
+set ylabel "number of active jobs"
+set title "Active jobs"
+plot "plot_active.txt" using 1:2 with line
+
+set output "cumulativeplot.png"
+set ylabel "number of completed jobs"
+set title "Cumulative jobs"
+plot "plot_cumulative.txt" using 1:2 with lines
+EOF1
+
+gnuplot plotit.gp 2>/dev/null
+
+#cp *.png ../
+echo `pwd`>/tmp/curdir
+echo `ls`>/tmp/dirlist
+#cd ..
+EOF
+
+sh /tmp/plotswiftlogs $swiftlog
+cp *.png $outdir/
+
+#for i in `find $outdir`
+#do
+# lastfile=$i
+#done
+#bname=`basename $lastfile`
+
+cat << EOF > $htmlfile
+<!DOCTYPE HTML>
+
+<html xmlns="http://www.w3.org/1999/xhtml">
+<head>
+ <title>Catsn output</title>
+</head>
+<body>
+<h2>Swift run trace plots</h2>
+
+<a href="activeplot.png" alt="active plot">active plot</a>
+<a href="cumulativeplot.png" alt="cumulative plot">cumulative plot</a>
+
+<h2>Browse output of catsn application</h2>
+`for i in \`find $outdir -type f\`; do echo "<a href=\`basename $i\`>Output: \`basename $i\`</a><br/>"; done`
+</body>
+</html>
+EOF
+
+if [ "$EXITCODE" -ne "0" ]; then
+ cat std.err >&2
+fi
+cp std.err $logfile
+rm std.err
+exit $EXITCODE
Property changes on: SwiftApps/swift-galaxy/swift/swift-catsn
___________________________________________________________________
Added: svn:executable
+ *
Added: SwiftApps/swift-galaxy/swift/swift-galaxy
===================================================================
--- SwiftApps/swift-galaxy/swift/swift-galaxy (rev 0)
+++ SwiftApps/swift-galaxy/swift/swift-galaxy 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,196 @@
+#!/bin/bash
+
+site=$1
+script=$2
+logfile=$3
+
+ln -s $script script.swift
+swift=/home/maheshwari/swift-0.94/cog/modules/swift/dist/swift-svn/bin/swift
+# use "here" document for configs
+case "$site" in
+midway )
+cat << 'EOF' > /tmp/sites.xml
+<config>
+ <pool handle="midway">
+ <execution provider="coaster" jobmanager="local:slurm"/>
+ <profile namespace="globus" key="queue">sandyb</profile>
+ <profile namespace="globus" key="jobsPerNode">16</profile>
+ <profile namespace="globus" key="maxWalltime">02:00:00</profile>
+ <profile namespace="globus" key="maxTime">7500</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">2</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="karajan" key="jobThrottle">.31</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <workdirectory>/tmp/swift.work</workdirectory>
+ </pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+midway echo echo
+midway cat cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+uc3 )
+cat << 'EOF' > /tmp/sites.xml
+<config>
+ <pool handle="uc3">
+ <execution provider="coaster" url="uc3-sub.uchicago.edu" jobmanager="ssh-cl:condor"/>
+ <!--<execution provider="coaster" jobmanager="local:condor"/>-->
+ <profile namespace="karajan" key="jobThrottle">.09</profile>
+ <profile namespace="karajan" key="initialScore">1000</profile>
+ <profile namespace="globus" key="jobsPerNode">1</profile>
+ <profile namespace="globus" key="maxWalltime">3600</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">1</profile>
+ <profile namespace="globus" key="condor.Requirements">UidDomain == "osg-gk.mwt2.org"</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="condor.+AccountingGroup">"group_friends.{env.USER}"</profile>
+ <profile namespace="globus" key="jobType">nonshared</profile>
+ <filesystem provider="local" url="none" />
+ <!--<workdirectory>/home/maheshwari/test/catsn/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ </pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+uc3 echo /bin/echo
+uc3 cat /bin/cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+stampede )
+cat << 'EOF' > /tmp/sites.xml
+<config>
+<pool handle="stampede">
+ <!--<execution provider="coaster" jobmanager="gt2:gt2:slurm" url="login5.stampede.tacc.utexas.edu:2119/jobmanager-slurm"/>-->
+ <execution provider="coaster" jobmanager="ssh-cl:slurm" url="stampede.tacc.utexas.edu"/>
+ <!--<filesystem provider="gsiftp" url="gsiftp://gridftp.stampede.tacc.utexas.edu:2811"/>-->
+ <filesystem provider="local"/>
+ <profile namespace="globus" key="jobsPerNode">16</profile>
+ <profile namespace="globus" key="ppn">16</profile>
+ <profile namespace="globus" key="project">TG-STA110005S</profile>
+ <profile namespace="globus" key="queue">normal</profile>
+ <profile namespace="globus" key="slurm.mail-user">ketancmaheshwari at gmail.com</profile>
+ <profile namespace="globus" key="slurm.mail-type">ALL</profile>
+ <profile namespace="globus" key="maxWalltime">02:00:00</profile>
+ <profile namespace="globus" key="maxTime">8000</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">1</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="karajan" key="jobThrottle">.15</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <workdirectory>/tmp/swift.work</workdirectory>
+</pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+stampede echo echo
+stampede cat cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+localhost )
+cat << 'EOF' > /tmp/sites.xml
+<config>
+<pool handle="localhost">
+ <execution provider="coaster" jobmanager="local:local"/>
+ <filesystem provider="local"/>
+ <!--<workdirectory>/home/kcm92/powergridapps/swiftscripts/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ <profile namespace="karajan" key="jobThrottle">0.31</profile>
+</pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+localhost echo echo
+localhost cat cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=false
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+* )
+echo "defaulting to localhost"
+cat << 'EOF' > /tmp/sites.xml
+<config>
+<pool handle="localhost">
+ <execution provider="coaster" jobmanager="local:local"/>
+ <filesystem provider="local"/>
+ <!--<workdirectory>/home/kcm92/powergridapps/swiftscripts/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ <profile namespace="karajan" key="jobThrottle">0.31</profile>
+ </pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+localhost echo echo
+localhost cat cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=false
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+esac
+
+$swift -sites.file /tmp/sites.xml -tc.file /tmp/tc -config /tmp/cf script.swift 2> std.err
+EXITCODE=$?
+
+if [ "$EXITCODE" -ne "0" ]; then
+ cat std.err >&2
+fi
+cp std.err $logfile
+rm std.err
+exit $EXITCODE
Property changes on: SwiftApps/swift-galaxy/swift/swift-galaxy
___________________________________________________________________
Added: svn:executable
+ *
Added: SwiftApps/swift-galaxy/swift/swift-mysim
===================================================================
--- SwiftApps/swift-galaxy/swift/swift-mysim (rev 0)
+++ SwiftApps/swift-galaxy/swift/swift-mysim 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,282 @@
+#!/bin/bash
+
+site=$1
+nsim=$2
+steps=$3
+range=$4
+values=$5
+outdir=$6
+logfile=$7
+htmlfile=$8
+
+mkdir -p $outdir
+
+swift=`which swift`
+# use "here" document for configs
+
+cat << EOF > /tmp/mysim.swift
+type file;
+
+app (file out, file log) simulation (int sim_steps, int sim_range, int sim_values) {
+ simulate "--timesteps" sim_steps "--range" sim_range "--nvalues" sim_values stdout=@out stderr=@log;
+}
+
+app (file out, file log) analyze (file s[]) {
+ stats @filenames(s) stdout=@out stderr=@log;
+}
+
+int nsim = @toInt(@arg("nsim", "10"));
+int steps = @toInt(@arg("steps", "1"));
+int range = @toInt(@arg("range", "100"));
+int values = @toInt(@arg("values", "5"));
+
+file sims[];
+
+foreach i in [0:nsim-1] {
+ file simout <single_file_mapper; file=@strcat("output/sim_",i,".out")>;
+ file simlog <single_file_mapper; file=@strcat("output/sim_",i,".log")>;
+ (simout,simlog) = simulation(steps,range,values);
+ sims[i] = simout;
+}
+
+file stats_out<"output/average.out">;
+file stats_log<"output/average.log">;
+(stats_out, stats_log) = analyze(sims);
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+
+cat << 'EOF' > /tmp/tc
+swiftgal echo echo
+swiftgal cat cat
+swiftgal simulate simulate.sh
+swiftgal stats stats.sh
+EOF
+
+case "$site" in
+midway )
+cat << 'EOF' > /tmp/sites.xml
+<?xml version="1.0" encoding="UTF-8"?>
+<config xmlns="http://www.ci.uchicago.edu/swift/SwiftSites">
+ <pool handle="swiftgal">
+ <execution provider="coaster" url="swift.rcc.uchicago.edu" jobmanager="ssh-cl:slurm"/>
+ <profile namespace="globus" key="queue">sandyb</profile>
+ <profile namespace="globus" key="jobsPerNode">16</profile>
+ <profile namespace="globus" key="maxWalltime">02:00:00</profile>
+ <profile namespace="globus" key="maxTime">7500</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">4</profile>
+ <profile namespace="globus" key="maxNodes">2</profile>
+ <profile namespace="globus" key="nodeGranularity">2</profile>
+ <profile namespace="karajan" key="jobThrottle">1.27</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <workdirectory>/scratch/midway/maheshwari/swift.work</workdirectory>
+ </pool>
+</config>
+EOF
+
+;;
+
+uc3 )
+cat << 'EOF' > /tmp/sites.xml
+<?xml version="1.0" encoding="UTF-8"?>
+<config xmlns="http://www.ci.uchicago.edu/swift/SwiftSites">
+ <pool handle="swiftgal">
+ <execution provider="coaster" url="uc3-sub.uchicago.edu" jobmanager="ssh-cl:condor"/>
+ <!--<execution provider="coaster" jobmanager="local:condor"/>-->
+ <profile namespace="karajan" key="jobThrottle">.09</profile>
+ <profile namespace="karajan" key="initialScore">1000</profile>
+ <profile namespace="globus" key="jobsPerNode">1</profile>
+ <profile namespace="globus" key="maxWalltime">3600</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">1</profile>
+ <profile namespace="globus" key="condor.Requirements">UidDomain == "osg-gk.mwt2.org"</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="condor.+AccountingGroup">"group_friends.{env.USER}"</profile>
+ <profile namespace="globus" key="jobType">nonshared</profile>
+ <filesystem provider="local" url="none" />
+ <!--<workdirectory>/home/maheshwari/test/catsn/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ </pool>
+</config>
+EOF
+
+;;
+
+stampede )
+cat << 'EOF' > /tmp/sites.xml
+<?xml version="1.0" encoding="UTF-8"?>
+<config xmlns="http://www.ci.uchicago.edu/swift/SwiftSites">
+<pool handle="swiftgal">
+ <execution provider="coaster" jobmanager="ssh-cl:slurm" url="stampede.tacc.utexas.edu"/>
+ <filesystem provider="local"/>
+ <profile namespace="globus" key="jobsPerNode">16</profile>
+ <profile namespace="globus" key="ppn">16</profile>
+ <profile namespace="globus" key="project">TG-STA110005S</profile>
+ <profile namespace="globus" key="queue">normal</profile>
+ <profile namespace="globus" key="slurm.mail-user">ketancmaheshwari at gmail.com</profile>
+ <profile namespace="globus" key="slurm.mail-type">ALL</profile>
+ <profile namespace="globus" key="maxWalltime">02:00:00</profile>
+ <profile namespace="globus" key="maxTime">8000</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">1</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="karajan" key="jobThrottle">.15</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <workdirectory>/tmp/swift.work</workdirectory>
+</pool>
+</config>
+EOF
+
+;;
+
+localhost )
+cat << 'EOF' > /tmp/sites.xml
+<?xml version="1.0" encoding="UTF-8"?>
+<config xmlns="http://www.ci.uchicago.edu/swift/SwiftSites">
+<pool handle="swiftgal">
+ <execution provider="coaster" jobmanager="local:local"/>
+ <filesystem provider="local"/>
+ <!--<workdirectory>/home/kcm92/powergridapps/swiftscripts/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ <profile namespace="karajan" key="jobThrottle">0.31</profile>
+</pool>
+</config>
+EOF
+;;
+
+* )
+echo "defaulting to localhost"
+
+cat << 'EOF' > /tmp/sites.xml
+<?xml version="1.0" encoding="UTF-8"?>
+<config xmlns="http://www.ci.uchicago.edu/swift/SwiftSites">
+<pool handle="swiftgal">
+ <execution provider="coaster" jobmanager="local:local"/>
+ <filesystem provider="local"/>
+ <!--<workdirectory>/home/kcm92/powergridapps/swiftscripts/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ <profile namespace="karajan" key="jobThrottle">0.31</profile>
+ </pool>
+</config>
+EOF
+;;
+esac
+
+$swift -sites.file /tmp/sites.xml -tc.file /tmp/tc -config /tmp/cf /tmp/mysim.swift -nsim=$nsim -steps=$steps -range=$range -values=$values 2> std.err
+EXITCODE=$?
+
+swiftlog=`\ls -t *.log | head -1`
+
+cat << 'EOF' > /tmp/plotswiftlogs
+#!/bin/bash
+
+#usage: ./plotswiftlogs.ketan <swift-logfile.log>
+
+SWIFTLOGFILE=$1
+
+#TMPDIR=`mktemp -d plotlog.XXX`
+
+grep -i ProgressTicker $SWIFTLOGFILE > swiftoutfile.out
+
+SWIFTOUTFILE=swiftoutfile.out
+
+#extract start time
+TMPDATE=`grep -i progress $SWIFTOUTFILE 2>/dev/null | head -n 1 | cut -f1-2 -d ' '`
+START_TIME=`date +%s -d "$TMPDATE"`
+
+#extract end time
+TMPDATE=`grep -i progress $SWIFTOUTFILE 2>/dev/null | tail -n 1 | cut -f1-2 -d ' '`
+END_TIME=`date +%s -d "$TMPDATE"`
+
+#duration
+DIFFTIME=$((END_TIME - START_TIME))
+
+#extract active runs in a file
+(grep -o -i "Active:[0-9]*" $SWIFTOUTFILE 2>/dev/null | awk -F: '{print $2}' >active.txt)
+
+#extract successful completions in a file
+(grep -o -i "Successfully:[0-9]*" $SWIFTOUTFILE 2>/dev/null | awk -F: '{print $2}' > cumulative.txt)
+
+#prepare tics
+activelines=`wc -l active.txt | awk '{print $1}'`
+cumulines=`wc -l cumulative.txt | awk '{print $1}'`
+
+if [ $activelines -ne 0 ]
+then
+ activelinespertic=`echo "scale=5 ; $DIFFTIME / $activelines" | bc`
+fi
+
+seq 0 $activelinespertic $DIFFTIME > activetics.txt
+
+if [ $cumulines -ne 0 ]
+then
+ cumulinespertic=`echo "scale=5 ; $DIFFTIME / $cumulines" | bc`
+fi
+
+seq 0 $cumulinespertic $DIFFTIME > cumultics.txt
+
+#final plot data
+paste activetics.txt active.txt > plot_active.txt
+paste cumultics.txt cumulative.txt > plot_cumulative.txt
+
+cat << EOF1 > plotit.gp
+set terminal png enhanced
+set nokey
+set output "cumulativeplot.png"
+set xlabel "Time in sec"
+set ylabel "number of completed apps"
+set title "Cumulative Apps Completed"
+plot "plot_cumulative.txt" using 1:2 with lines
+set output "activeplot.png"
+set xlabel "Time in sec"
+set ylabel "number of active apps"
+set title "Active Apps"
+plot "plot_active.txt" using 1:2 with line
+EOF1
+
+gnuplot plotit.gp 2>/dev/null
+rm swiftoutfile.out plotit.gp active.txt cumulative.txt activetics.txt plot_active.txt plot_cumulative.txt cumultics.txt
+
+EOF
+
+sh /tmp/plotswiftlogs $swiftlog
+cp *.png $outdir/
+
+cat << EOF > $htmlfile
+<!DOCTYPE HTML>
+
+<html xmlns="http://www.w3.org/1999/xhtml">
+<head>
+ <title>Application output</title>
+</head>
+<body>
+<h2>Swift run trace plots</h2>
+
+<a href="activeplot.png" alt="active plot">active plot</a>
+<a href="cumulativeplot.png" alt="cumulative plot">cumulative plot</a>
+
+<h2>Browse output of application</h2>
+`for i in \`find $outdir -type f\`; do echo "<a href=\`basename $i\`>Output: \`basename $i\`</a><br/>"; done`
+</body>
+</html>
+EOF
+
+if [ "$EXITCODE" -ne "0" ]; then
+ cat std.err >&2
+fi
+cp std.err $logfile
+rm std.err
+exit $EXITCODE
Property changes on: SwiftApps/swift-galaxy/swift/swift-mysim
___________________________________________________________________
Added: svn:executable
+ *
Added: SwiftApps/swift-galaxy/swift/swift-powergrid
===================================================================
--- SwiftApps/swift-galaxy/swift/swift-powergrid (rev 0)
+++ SwiftApps/swift-galaxy/swift/swift-powergrid 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,321 @@
+#!/bin/bash
+
+site=$1
+batch=$2
+#stochmodel=$3
+#edrevised=$4
+#asciidata=$5
+#printres=$6
+#illinois=$7
+#wind_data=$8
+logfile=$3
+
+#cp $stochmodel stochmodel.run
+#cp $edrevised edrevised.mod
+#cp $asciidata set_data_ascii.inc
+#cp $printres print_results_revised.inc
+#cp $illinois Illinois.tgz
+#cp $wind_data wind_data.dat
+echo $@>>/tmp/tmp.txt
+#swift=/home/maheshwari/swift-0.94/cog/modules/swift/dist/swift-svn/bin/swift
+swift=/home/maheshwari/swift-devel/cog/modules/swift/dist/swift-svn/bin/swift
+# use "here" document for configs
+
+cat << 'EOF' > /tmp/inference4galaxy.swift
+type file;
+
+app ( file _obj_out, file _xhat_out1, file _xhat_out2, file _ampl_res, file _out)
+ ampl_app ( int _s,
+ int _fix_x,
+ file _stoch_model,
+ file _illinois,
+ file _edrevised_model,
+ file _ascii_data,
+ file _print_results,
+ file _wind_data
+ ) {
+ runampl _s _fix_x @_stoch_model @_xhat_out1 @_xhat_out2 @_obj_out @_illinois @_edrevised_model @_ascii_data @_print_results @_ampl_res @_wind_data stdout=@_out;
+}
+
+app (file _obj_out, file _ampl_l_res, file _out) ampl_app_L (
+ int _s,
+ int _fix_x,
+ file _stoch_model,
+ file _illinois,
+ file _edrevised_model,
+ file _ascii_data,
+ file _print_results
+ ) {
+
+ runampl_l _s _fix_x @_stoch_model @_obj_out @_illinois @_edrevised_model @_ascii_data @_print_results @_ampl_l_res stdout=@_out;
+}
+
+app (file _obj_out, file _ampl_u_res, file _out) ampl_app_U (
+ int _s,
+ int _fix_x,
+ file _stoch_model,
+ file _xhat,
+ file _illinois,
+ file _edrevised_model,
+ file _ascii_data,
+ file _print_results,
+ file _wind_data
+ ) {
+
+ runampl_u _s _fix_x @_stoch_model @_xhat @_obj_out @_illinois @_edrevised_model @_ascii_data @_print_results @_ampl_u_res @_wind_data stdout=@_out;
+}
+file stoch_model<"/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/stochmodel.run">;
+file edrevised_model<"/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/edrevised.mod">;
+file ascii_data<"/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/set_data_ascii.inc">;
+file print_results<"/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/print_results_revised.inc">;
+file illinois<"/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/Illinois.tgz">;
+file wind_data<"/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/wind_data.dat">;
+
+file out[] <simple_mapper; location="outdir", prefix="ampl",suffix=".out">;
+file obj_out[] <simple_mapper; location="obj_outdir", prefix="obj_ampl",suffix=".out">;
+file ampl_res[] <simple_mapper; location="Results", prefix="ampl_res",suffix=".out">;
+
+file xhat_out1[] <simple_mapper; location="outdir", prefix="xhat1",suffix=".out">;
+file xhat_out2[] <simple_mapper; location="outdir", prefix="xhat2",suffix=".out">;
+
+file out_l[][][] <simple_mapper; location="outdir", prefix="out_l", suffix=".out">;
+file obj_out_l[][][] <simple_mapper; location="obj_outdir", prefix="obj_out_l", suffix=".out">;
+file ampl_l_res[][][] <simple_mapper; location="Results", prefix="ampl_res_l", suffix=".out">;
+file xhat_out_l1[][][] <simple_mapper; location="outdir", prefix="xhat_l1",suffix=".out">;
+file xhat_out_l2[][][] <simple_mapper; location="outdir", prefix="xhat_l2",suffix=".out">;
+
+file out_u[][][] <simple_mapper; location="outdir", prefix="out_u", suffix=".out">;
+file obj_out_u[][][] <simple_mapper; location="obj_outdir", prefix="obj_out_u", suffix=".out">;
+file ampl_u_res[][][] <simple_mapper; location="Results", prefix="ampl_res_u", suffix=".out">;
+#file upper_out[][][] <simple_mapper; location="outdir", prefix="upper",suffix=".out">;
+#file lower_out[][][] <simple_mapper; location="outdir", prefix="lower",suffix=".out">;
+
+int nS[] = [10]; //number of scenario sweeps
+int Batch = @toInt(@arg("batch", "20"));
+
+foreach S, idxs in nS{
+(obj_out[idxs], xhat_out1[idxs], xhat_out2[idxs], ampl_res[idxs], out[idxs]) = ampl_app (S, 0, stoch_model, illinois, edrevised_model, ascii_data, print_results, wind_data);
+
+
+foreach B, idxb in [10:Batch:10]{
+ foreach k in [0:B]{
+ (obj_out_l[idxs][idxb][k], xhat_out_l1[idxs][idxb][k], xhat_out_l2[idxs][idxb][k], ampl_l_res[idxs][idxb][k], out_l[idxs][idxb][k]) = ampl_app (S, 0, stoch_model, illinois, edrevised_model, ascii_data, print_results, wind_data);
+
+ (obj_out_u[idxs][idxb][k], ampl_u_res[idxs][idxb][k], out_u[idxs][idxb][k]) = ampl_app_U(S, 1, stoch_model, xhat_out1[idxs], illinois, edrevised_model, ascii_data, print_results, wind_data);
+
+}
+}
+}
+EOF
+
+case "$site" in
+midway )
+cat << 'EOF' > /tmp/sites.xml
+<config>
+ <pool handle="midway">
+ <execution provider="coaster" jobmanager="local:slurm"/>
+ <filesystem provider="local" />
+ <profile namespace="globus" key="queue">sandyb</profile>
+ <profile namespace="globus" key="jobsPerNode">16</profile>
+ <profile namespace="globus" key="maxWalltime">02:00:00</profile>
+ <profile namespace="globus" key="maxTime">7500</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">2</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="karajan" key="jobThrottle">.31</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <workdirectory>/tmp/swift.work</workdirectory>
+ </pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+midway echo echo
+midway cat cat
+midway gensample /home/maheshwari/powergridapps/bin/gensample.py
+midway runampl /home/maheshwari/powergridapps/bin/run_ampl.py
+midway runampl_l /home/maheshwari/powergridapps/bin/run_ampl_l.py
+midway runampl_u /home/maheshwari/powergridapps/bin/run_ampl_u.py
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=0
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+use.wrapper.staging=false
+EOF
+;;
+
+uc3 )
+cat << 'EOF' > /tmp/sites.xml
+<config>
+ <pool handle="uc3">
+ <execution provider="coaster" url="uc3-sub.uchicago.edu" jobmanager="ssh-cl:condor"/>
+ <!--<execution provider="coaster" jobmanager="local:condor"/>-->
+ <profile namespace="karajan" key="jobThrottle">.09</profile>
+ <profile namespace="karajan" key="initialScore">1000</profile>
+ <profile namespace="globus" key="jobsPerNode">1</profile>
+ <profile namespace="globus" key="maxWalltime">3600</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">1</profile>
+ <profile namespace="globus" key="condor.Requirements">UidDomain == "osg-gk.mwt2.org"</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="condor.+AccountingGroup">"group_friends.{env.USER}"</profile>
+ <profile namespace="globus" key="jobType">nonshared</profile>
+ <filesystem provider="local" url="none" />
+ <!--<workdirectory>/home/maheshwari/test/catsn/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ </pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+uc3 echo /bin/echo
+uc3 cat /bin/cat
+uc3 runampl run_ampl.py
+uc3 runampl_l run_ampl_l.py
+uc3 runampl_u run_ampl_u.py
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+stampede )
+cat << 'EOF' > /tmp/sites.xml
+<?xml version="1.0" encoding="UTF-8"?>
+<config xmlns="http://www.ci.uchicago.edu/swift/SwiftSites">
+<pool handle="stampede">
+ <execution provider="coaster" jobmanager="ssh-cl:slurm" url="stampede.tacc.utexas.edu"/>
+ <filesystem provider="local"/>
+ <profile namespace="globus" key="jobsPerNode">16</profile>
+ <profile namespace="globus" key="ppn">16</profile>
+ <profile namespace="globus" key="project">TG-EAR130015</profile>
+ <profile namespace="globus" key="queue">normal</profile>
+ <profile namespace="globus" key="slurm.mail-user">ketancmaheshwari at gmail.com</profile>
+ <profile namespace="globus" key="slurm.mail-type">ALL</profile>
+ <profile namespace="globus" key="maxWalltime">02:00:00</profile>
+ <profile namespace="globus" key="maxTime">8000</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">1</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="karajan" key="jobThrottle">.15</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <workdirectory>/tmp/swift.work</workdirectory>
+</pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+stampede echo echo
+stampede cat cat
+stampede gensample gensample.py
+stampede runampl run_ampl.py
+stampede runampl_l run_ampl_l.py
+stampede runampl_u run_ampl_u.py
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=0
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+use.wrapper.staging=false
+EOF
+;;
+
+localhost )
+cat << 'EOF' > /tmp/sites.xml
+<config>
+<pool handle="localhost">
+ <execution provider="local" />
+ <filesystem provider="local"/>
+ <!--<workdirectory>/home/kcm92/powergridapps/swiftscripts/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ <profile namespace="karajan" key="jobThrottle">0.2</profile>
+</pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+localhost echo echo
+localhost cat cat
+localhost gensample /home/maheshwari/powergridapps/bin/gensample.py
+localhost runampl /home/maheshwari/powergridapps/bin/run_ampl.py
+localhost runampl_l /home/maheshwari/powergridapps/bin/run_ampl_l.py
+localhost runampl_u /home/maheshwari/powergridapps/bin/run_ampl_u.py
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=false
+wrapperlog.always.transfer=true
+execution.retries=0
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+use.wrapper.staging=false
+EOF
+;;
+
+* )
+echo "defaulting to localhost"
+cat << 'EOF' > /tmp/sites.xml
+<config>
+<pool handle="localhost">
+ <execution provider="local" />
+ <filesystem provider="local"/>
+ <!--<workdirectory>/home/kcm92/powergridapps/swiftscripts/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ <profile namespace="karajan" key="jobThrottle">0.31</profile>
+ </pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+localhost echo echo
+localhost cat cat
+localhost gensample /home/maheshwari/powergridapps/bin/gensample.py
+localhost runampl /home/maheshwari/powergridapps/bin/run_ampl.py
+localhost runampl_l /home/maheshwari/powergridapps/bin/run_ampl_l.py
+localhost runampl_u /home/maheshwari/powergridapps/bin/run_ampl_u.py
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=false
+wrapperlog.always.transfer=true
+execution.retries=0
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+esac
+
+$swift -sites.file /tmp/sites.xml -tc.file /tmp/tc -config /tmp/cf /tmp/inference4galaxy.swift -batch=$batch 2> std.err
+#$swift -sites.file /tmp/sites.xml -tc.file /tmp/tc -config /tmp/cf /tmp/inference4galaxy.swift -batch=$batch -stochmodel=stochmodel.run -edrevised=edrevised.mod -asciidata=set_data_ascii.inc -printres=print_results_revised.inc -illinois=Illinois.tgz -wind_data=wind_data.dat 2> std.err
+
+EXITCODE=$?
+
+if [ "$EXITCODE" -ne "0" ]; then
+ cat std.err >&2
+fi
+cp std.err $logfile
+rm std.err
+exit $EXITCODE
Property changes on: SwiftApps/swift-galaxy/swift/swift-powergrid
___________________________________________________________________
Added: svn:executable
+ *
Added: SwiftApps/swift-galaxy/swift/swift-stats
===================================================================
--- SwiftApps/swift-galaxy/swift/swift-stats (rev 0)
+++ SwiftApps/swift-galaxy/swift/swift-stats 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,205 @@
+#!/bin/bash
+# swift-stats "$site.site_select" "$n" "$html_file.files_path" "$log_file" "$html_file" "$site.walltime" "$site.slots" "$site.queue" "$site.nodes" "$site.throttle" "$site.workdir"
+# 1 2 3 4 5 6 7 8 9 10 11
+
+site=$1
+n=$2
+outdir=$3
+logfile=$4
+htmlfile=$5
+walltime=$6
+slots=$7
+queue=$8
+nodes=$9
+conc=${10}
+workdir=${11}
+throttle=$(echo "scale=5;($conc-1)/100" |bc)
+
+mkdir -p $outdir
+
+echo $6 > /tmp/args.txt
+
+swift=`\which swift`
+
+# use "here" document for configs
+cat << EOF > /tmp/stats.swift
+type file;
+
+app (file o) statsapp () {
+ stats stdout=@o;
+}
+
+file out[]<simple_mapper; location="$outdir", prefix="f.",suffix=".txt">;
+
+foreach j in [1:@toInt(@arg("n","2"))] {
+ out[j] = statsapp ();
+}
+EOF
+
+case "$site" in
+clusterPBS )
+cat << EOF > /tmp/sites.xml
+<?xml version="1.0" encoding="UTF-8"?>
+<config xmlns="http://www.ci.uchicago.edu/swift/SwiftSites">
+<pool handle="clusterpbs">
+ <execution provider="coaster" jobmanager="local:pbs"/>
+ <profile namespace="globus" key="queue">default</profile>
+ <profile namespace="globus" key="jobsPerNode">24</profile>
+ <profile namespace="globus" key="maxWalltime">${walltime}</profile>
+ <profile namespace="globus" key="providerAttributes">pbs.aprun;pbs.mpp;depth=24</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">${slots}</profile>
+ <profile namespace="globus" key="maxNodes">${nodes}</profile>
+ <profile namespace="globus" key="nodeGranularity">${nodes}</profile>
+ <profile namespace="karajan" key="jobThrottle">${throttle}</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <workdirectory>${workdir}</workdirectory>
+</pool>
+</config>
+EOF
+
+cat << EOF > /tmp/tc
+clusterpbs echo echo
+clusterpbs cat cat
+clusterpbs stats stats.sh
+EOF
+
+cat << EOF > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+clusterSLURM )
+cat << EOF > /tmp/sites.xml
+<?xml version="1.0" encoding="UTF-8"?>
+<config xmlns="http://www.ci.uchicago.edu/swift/SwiftSites">
+<pool handle="clusterslurm">
+ <execution provider="coaster" jobmanager="local:slurm"/>
+ <profile namespace="globus" key="queue">${queue}</profile>
+ <profile namespace="globus" key="jobsPerNode">8</profile>
+ <profile namespace="globus" key="ppn">8</profile>
+ <profile namespace="globus" key="maxWalltime">${walltime}</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">${slots}</profile>
+ <profile namespace="globus" key="maxNodes">${nodes}</profile>
+ <profile namespace="globus" key="nodeGranularity">${nodes}</profile>
+ <profile namespace="karajan" key="jobThrottle">${throttle}</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <workdirectory>${workdir}</workdirectory>
+</pool>
+</config>
+EOF
+
+cat << EOF > /tmp/tc
+clusterslurm echo echo
+clusterslurm cat cat
+clusterslurm stats stats.sh
+EOF
+
+cat << EOF > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=0
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+localhost )
+cat << EOF > /tmp/sites.xml
+<?xml version="1.0" encoding="UTF-8"?>
+<config xmlns="http://www.ci.uchicago.edu/swift/SwiftSites">
+ <pool handle="localhost">
+ <execution provider="local" />
+ <profile namespace="karajan" key="jobThrottle">0.02</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <filesystem provider="local"/>
+ <workdirectory>/tmp/swift.work</workdirectory>
+ <profile namespace="swift" key="stagingMethod">local</profile>
+ </pool>
+</config>
+EOF
+
+cat << EOF > /tmp/tc
+localhost echo echo
+localhost cat cat
+localhost stats stats.sh
+EOF
+
+cat << EOF > /tmp/cf
+use.provider.staging=false
+wrapperlog.always.transfer=true
+execution.retries=0
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+* )
+echo "defaulting to localhost"
+
+cat << EOF > /tmp/sites.xml
+<?xml version="1.0" encoding="UTF-8"?>
+<config xmlns="http://www.ci.uchicago.edu/swift/SwiftSites">
+<pool handle="localhost">
+ <execution provider="local" />
+ <profile namespace="karajan" key="jobThrottle">0.02</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <filesystem provider="local"/>
+ <workdirectory>/tmp/swift.work</workdirectory>
+ <profile namespace="swift" key="stagingMethod">local</profile>
+</pool>
+</config>
+EOF
+
+cat << EOF > /tmp/tc
+localhost echo echo
+localhost cat cat
+localhost stats stats.sh
+EOF
+
+cat << EOF > /tmp/cf
+use.provider.staging=false
+wrapperlog.always.transfer=true
+execution.retries=0
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+esac
+
+$swift -sites.file /tmp/sites.xml -tc.file /tmp/tc -config /tmp/cf /tmp/stats.swift -n=$n -data=$data 2> std.err
+EXITCODE=$?
+
+swiftlog=`\ls -t *.log | head -1`
+
+cat << EOF > $htmlfile
+<!DOCTYPE HTML>
+
+<html xmlns="http://www.w3.org/1999/xhtml">
+<head>
+ <title>Hello output</title>
+</head>
+<body>
+<h2>Browse output of hello application</h2>
+`for i in \`find $outdir -type f\`; do echo "<a href=\`basename $i\`>Output: \`basename $i\`</a><br/>"; done`
+</body>
+</html>
+EOF
+
+if [ "$EXITCODE" -ne "0" ]; then
+ cat std.err >&2
+fi
+cp std.err $logfile
+rm std.err
+exit $EXITCODE
Added: SwiftApps/swift-galaxy/swift/swift-try
===================================================================
--- SwiftApps/swift-galaxy/swift/swift-try (rev 0)
+++ SwiftApps/swift-galaxy/swift/swift-try 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,341 @@
+#!/bin/bash
+
+site=$1
+nsim=$2
+steps=$3
+range=$4
+values=$5
+outdir=$6
+logfile=$7
+htmlfile=$8
+
+mkdir -p $outdir
+
+swift=`which swift`
+# use "here" document for configs
+
+cat << EOF > /tmp/mysim.swift
+type file;
+
+app (file out, file log) simulation (int sim_steps, int sim_range, int sim_values)
+{
+ simulate "--timesteps" sim_steps "--range" sim_range "--nvalues" sim_values stdout=@out stderr=@log;
+}
+
+app (file out, file log) analyze (file s[])
+{
+ stats @filenames(s) stdout=@out stderr=@log;
+}
+
+int nsim = @toInt(@arg("nsim", "10"));
+int steps = @toInt(@arg("steps", "1"));
+int range = @toInt(@arg("range", "100"));
+int values = @toInt(@arg("values", "5"));
+
+file sims[];
+
+foreach i in [0:nsim-1] {
+ file simout <single_file_mapper; file=@strcat("output/sim_",i,".out")>;
+ file simlog <single_file_mapper; file=@strcat("output/sim_",i,".log")>;
+ (simout,simlog) = simulation(steps,range,values);
+ sims[i] = simout;
+}
+
+file stats_out<"output/average.out">;
+file stats_log<"output/average.log">;
+(stats_out, stats_log) = analyze(sims);
+
+EOF
+
+case "$site" in
+midway )
+cat << 'EOF' > /tmp/sites.xml
+<?xml version="1.0" encoding="UTF-8"?>
+<config xmlns="http://www.ci.uchicago.edu/swift/SwiftSites">
+ <pool handle="midway">
+ <execution provider="coaster" url="swift.rcc.uchicago.edu" jobmanager="ssh-cl:slurm"/>
+ <profile namespace="globus" key="queue">sandyb</profile>
+ <profile namespace="globus" key="jobsPerNode">16</profile>
+ <profile namespace="globus" key="maxWalltime">02:00:00</profile>
+ <profile namespace="globus" key="maxTime">7500</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">4</profile>
+ <profile namespace="globus" key="maxNodes">2</profile>
+ <profile namespace="globus" key="nodeGranularity">2</profile>
+ <profile namespace="karajan" key="jobThrottle">1.27</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <workdirectory>/scratch/midway/maheshwari/swift.work</workdirectory>
+ </pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+midway echo echo
+midway cat cat
+midway simulate simulate.sh
+midway stats stats.sh
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+uc3 )
+cat << 'EOF' > /tmp/sites.xml
+<?xml version="1.0" encoding="UTF-8"?>
+<config xmlns="http://www.ci.uchicago.edu/swift/SwiftSites">
+ <pool handle="uc3">
+ <execution provider="coaster" url="uc3-sub.uchicago.edu" jobmanager="ssh-cl:condor"/>
+ <!--<execution provider="coaster" jobmanager="local:condor"/>-->
+ <profile namespace="karajan" key="jobThrottle">.09</profile>
+ <profile namespace="karajan" key="initialScore">1000</profile>
+ <profile namespace="globus" key="jobsPerNode">1</profile>
+ <profile namespace="globus" key="maxWalltime">3600</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">1</profile>
+ <profile namespace="globus" key="condor.Requirements">UidDomain == "osg-gk.mwt2.org"</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="condor.+AccountingGroup">"group_friends.{env.USER}"</profile>
+ <profile namespace="globus" key="jobType">nonshared</profile>
+ <filesystem provider="local" url="none" />
+ <!--<workdirectory>/home/maheshwari/test/catsn/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ </pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+uc3 echo /bin/echo
+uc3 cat /bin/cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+stampede )
+cat << 'EOF' > /tmp/sites.xml
+<?xml version="1.0" encoding="UTF-8"?>
+<config xmlns="http://www.ci.uchicago.edu/swift/SwiftSites">
+<pool handle="stampede">
+ <execution provider="coaster" jobmanager="gt2:gt2:slurm" url="login5.stampede.tacc.utexas.edu:2119/jobmanager-slurm"/>
+ <!--<execution provider="coaster" jobmanager="ssh-cl:slurm" url="stampede.tacc.utexas.edu"/>-->
+ <!--<filesystem provider="gsiftp" url="gsiftp://gridftp.stampede.tacc.utexas.edu:2811"/>-->
+ <filesystem provider="local"/>
+ <profile namespace="globus" key="jobsPerNode">16</profile>
+ <profile namespace="globus" key="ppn">16</profile>
+ <profile namespace="globus" key="project">TG-STA110005S</profile>
+ <profile namespace="globus" key="queue">normal</profile>
+ <profile namespace="globus" key="slurm.mail-user">ketancmaheshwari at gmail.com</profile>
+ <profile namespace="globus" key="slurm.mail-type">ALL</profile>
+ <profile namespace="globus" key="maxWalltime">02:00:00</profile>
+ <profile namespace="globus" key="maxTime">8000</profile>
+ <profile namespace="globus" key="highOverAllocation">100</profile>
+ <profile namespace="globus" key="lowOverAllocation">100</profile>
+ <profile namespace="globus" key="slots">1</profile>
+ <profile namespace="globus" key="maxNodes">1</profile>
+ <profile namespace="globus" key="nodeGranularity">1</profile>
+ <profile namespace="karajan" key="jobThrottle">.15</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <workdirectory>/tmp/swift.work</workdirectory>
+</pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+stampede echo echo
+stampede cat cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=true
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+localhost )
+cat << 'EOF' > /tmp/sites.xml
+<?xml version="1.0" encoding="UTF-8"?>
+<config xmlns="http://www.ci.uchicago.edu/swift/SwiftSites">
+<pool handle="localhost">
+ <execution provider="coaster" jobmanager="local:local"/>
+ <filesystem provider="local"/>
+ <!--<workdirectory>/home/kcm92/powergridapps/swiftscripts/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ <profile namespace="karajan" key="jobThrottle">0.31</profile>
+</pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+localhost echo echo
+localhost cat cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=false
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+
+* )
+echo "defaulting to localhost"
+
+cat << 'EOF' > /tmp/sites.xml
+<?xml version="1.0" encoding="UTF-8"?>
+<config xmlns="http://www.ci.uchicago.edu/swift/SwiftSites">
+<pool handle="localhost">
+ <execution provider="coaster" jobmanager="local:local"/>
+ <filesystem provider="local"/>
+ <!--<workdirectory>/home/kcm92/powergridapps/swiftscripts/swift.work</workdirectory>-->
+ <workdirectory>/tmp/swift.work</workdirectory>
+ <profile namespace="karajan" key="jobThrottle">0.31</profile>
+ </pool>
+</config>
+EOF
+
+cat << 'EOF' > /tmp/tc
+localhost echo echo
+localhost cat cat
+EOF
+
+cat << 'EOF' > /tmp/cf
+use.provider.staging=false
+wrapperlog.always.transfer=true
+execution.retries=1
+provider.staging.pin.swiftfiles=false
+sitedir.keep=true
+lazy.errors=false
+EOF
+;;
+esac
+
+$swift -sites.file /tmp/sites.xml -tc.file /tmp/tc -config /tmp/cf /tmp/mysim.swift -nsim=$nsim -steps=$steps -range=$range -values=$values 2> std.err
+EXITCODE=$?
+
+swiftlog=`\ls -t *.log | head -1`
+
+#/tmp/plotswiftlogs $logfile 2>gnuplot.err
+cat << 'EOF' > /tmp/plotswiftlogs
+#!/bin/bash
+
+#usage: ./plotswiftlogs.ketan <swift-logfile.log>
+
+SWIFTLOGFILE=$1
+
+#TMPDIR=`mktemp -d plotlog.XXX`
+
+grep -i ProgressTicker $SWIFTLOGFILE > swiftoutfile.out
+
+SWIFTOUTFILE=swiftoutfile.out
+
+#extract start time
+TMPDATE=`grep -i progress $SWIFTOUTFILE 2>/dev/null | head -n 1 | cut -f1-2 -d ' '`
+START_TIME=`date +%s -d "$TMPDATE"`
+
+#extract end time
+TMPDATE=`grep -i progress $SWIFTOUTFILE 2>/dev/null | tail -n 1 | cut -f1-2 -d ' '`
+END_TIME=`date +%s -d "$TMPDATE"`
+
+#duration
+DIFFTIME=$((END_TIME - START_TIME))
+
+#extract active runs in a file
+(grep -o -i "Active:[0-9]*" $SWIFTOUTFILE 2>/dev/null | awk -F: '{print $2}' >active.txt)
+
+#extract successful completions in a file
+(grep -o -i "Successfully:[0-9]*" $SWIFTOUTFILE 2>/dev/null | awk -F: '{print $2}' > cumulative.txt)
+
+#prepare tics
+activelines=`wc -l active.txt | awk '{print $1}'`
+cumulines=`wc -l cumulative.txt | awk '{print $1}'`
+
+if [ $activelines -ne 0 ]
+then
+ activelinespertic=`echo "scale=5 ; $DIFFTIME / $activelines" | bc`
+fi
+
+seq 0 $activelinespertic $DIFFTIME > activetics.txt
+
+if [ $cumulines -ne 0 ]
+then
+ cumulinespertic=`echo "scale=5 ; $DIFFTIME / $cumulines" | bc`
+fi
+
+seq 0 $cumulinespertic $DIFFTIME > cumultics.txt
+
+#final plot data
+paste activetics.txt active.txt > plot_active.txt
+paste cumultics.txt cumulative.txt > plot_cumulative.txt
+
+cat << EOF1 > plotit.gp
+set terminal png enhanced
+set nokey
+set output "cumulativeplot.png"
+set xlabel "Time in sec"
+set ylabel "number of completed apps"
+set title "Cumulative Apps Completed"
+plot "plot_cumulative.txt" using 1:2 with lines
+set output "activeplot.png"
+set xlabel "Time in sec"
+set ylabel "number of active apps"
+set title "Active Apps"
+plot "plot_active.txt" using 1:2 with line
+EOF1
+
+gnuplot plotit.gp 2>/dev/null
+rm swiftoutfile.out plotit.gp active.txt cumulative.txt activetics.txt plot_active.txt plot_cumulative.txt cumultics.txt
+
+EOF
+
+sh /tmp/plotswiftlogs $swiftlog
+cp *.png $outdir/
+
+cat << EOF > $htmlfile
+<!DOCTYPE HTML>
+
+<html xmlns="http://www.w3.org/1999/xhtml">
+<head>
+ <title>Application output</title>
+</head>
+<body>
+<h2>Swift run trace plots</h2>
+
+<a href="activeplot.png" alt="active plot">active plot</a>
+<a href="cumulativeplot.png" alt="cumulative plot">cumulative plot</a>
+
+<h2>Browse output of application</h2>
+`for i in \`find $outdir -type f\`; do echo "<a href=\`basename $i\`>Output: \`basename $i\`</a><br/>"; done`
+</body>
+</html>
+EOF
+
+if [ "$EXITCODE" -ne "0" ]; then
+ cat std.err >&2
+fi
+cp std.err $logfile
+rm std.err
+exit $EXITCODE
Property changes on: SwiftApps/swift-galaxy/swift/swift-try
___________________________________________________________________
Added: svn:executable
+ *
Added: SwiftApps/swift-galaxy/swift/swift.xml
===================================================================
--- SwiftApps/swift-galaxy/swift/swift.xml (rev 0)
+++ SwiftApps/swift-galaxy/swift/swift.xml 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,40 @@
+<tool id="swift" name="Swift-tool">
+ <description>A generic Swift tool to run Swift workflows</description>
+
+ <command interpreter="bash">
+ swift-galaxy $site $script $log_file
+ </command>
+
+ <inputs>
+ <param name="site" type="select" label="Execution Location">
+ <option value="midway">Midway</option>
+ <option value="uc3">UC3</option>
+ <option value="localhost">Localhost</option>
+ <option value="stampede">Stampede</option>
+ </param>
+ <param format="swift" name="script" type="data" label="Swift script"/>
+ <conditional name="configuration">
+ <param name="mode" type="select" label="Swift configuration">
+ <option value="default">default configuration</option>
+ <option value="advanced">advanced configuration</option>
+ </param>
+ <when value="default">
+ </when>
+ <when value="advanced">
+ <param name="throttle" size="5" type="float" value="0.07" label="job throttle" help="number of parallel jobs to run"></param>
+ <param name="project" type="text" value="TG-STA110005S" label="Project allocation" help="name/code of project"></param>
+ <param name="slots" size="5" type="integer" value="1" label="slots" help="number of scheduler jobs"></param>
+ <param name="queue" size="5" type="text" value="normal" label="queue" help="queue to run jobs on"></param>
+ <param name="nodes" size="5" type="integer" value="1" label="nodes" help="number of nodes requested"></param>
+ <param name="nodegranularity" size="5" type="integer" value="1" label="node granularity" help="node granularity"></param>
+ <param name="jobspernode" size="5" type="integer" value="8" label="jobs per node" help="number of jobs per node requested"></param>
+ <param name="ppn" size="5" type="integer" value="8" label="ppn" help="processes per node requested"></param>
+ <param name="walltime" size="5" type="text" value="00:10:00" label="Job walltime" help="time in hh:mm:ss to request to scheduler for this job"></param>
+ <param name="maxtime" size="5" type="integer" value="700" label="application maxtime" help="Application maxtime in seconds for this job"></param>
+ </when>
+ </conditional>
+ </inputs>
+ <outputs>
+ <data format="txt" name="log_file" type="data" label="Swift output" />
+ </outputs>
+</tool>
Added: SwiftApps/swift-galaxy/swift/tc
===================================================================
--- SwiftApps/swift-galaxy/swift/tc (rev 0)
+++ SwiftApps/swift-galaxy/swift/tc 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,7 @@
+localhost echo echo
+localhost cat cat
+localhost gensample /home/maheshwari/powergridapps/bin/gensample.py
+localhost runampl /home/maheshwari/powergridapps/bin/run_ampl.py
+localhost runampl_l /home/maheshwari/powergridapps/bin/run_ampl_l.py
+localhost runampl_u /home/maheshwari/powergridapps/bin/run_ampl_u.py
+localhost stage /scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/dogftp.sh
Added: SwiftApps/swift-galaxy/swift/tmp.out
===================================================================
--- SwiftApps/swift-galaxy/swift/tmp.out (rev 0)
+++ SwiftApps/swift-galaxy/swift/tmp.out 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,20 @@
+Warning: The @ syntax for function invocation is deprecated
+[Error] sites.xml, line 1, col 9: cvc-elt.1: Cannot find the declaration of element 'config'.
+Progress: time: Wed, 25 Sep 2013 16:28:54 +0000
+Progress: time: Wed, 25 Sep 2013 16:28:55 +0000 Selecting site:1 Submitted:32
+Progress: time: Wed, 25 Sep 2013 16:29:17 +0000 Selecting site:1 Stage in:32
+Progress: time: Wed, 25 Sep 2013 16:29:21 +0000 Selecting site:1 Active:32
+Progress: time: Wed, 25 Sep 2013 16:29:48 +0000 Selecting site:30 Stage in:3 Active:28 Finished successfully:4
+Progress: time: Wed, 25 Sep 2013 16:29:49 +0000 Selecting site:6 Stage in:19 Submitted:6 Active:2 Stage out:5 Finished successfully:27
+Progress: time: Wed, 25 Sep 2013 16:29:50 +0000 Selecting site:1 Stage in:28 Active:4 Finished successfully:32
+Progress: time: Wed, 25 Sep 2013 16:29:51 +0000 Selecting site:1 Stage in:25 Active:7 Finished successfully:32
+Progress: time: Wed, 25 Sep 2013 16:29:52 +0000 Selecting site:1 Active:32 Finished successfully:32
+Progress: time: Wed, 25 Sep 2013 16:29:58 +0000 Active:32 Finished successfully:33
+Progress: time: Wed, 25 Sep 2013 16:29:59 +0000 Active:29 Finished successfully:36
+Progress: time: Wed, 25 Sep 2013 16:30:00 +0000 Active:26 Finished successfully:39
+Progress: time: Wed, 25 Sep 2013 16:30:01 +0000 Active:23 Finished successfully:42
+Progress: time: Wed, 25 Sep 2013 16:30:02 +0000 Active:22 Finished successfully:43
+Progress: time: Wed, 25 Sep 2013 16:30:03 +0000 Active:14 Finished successfully:51
+Progress: time: Wed, 25 Sep 2013 16:30:04 +0000 Active:8 Finished successfully:57
+Progress: time: Wed, 25 Sep 2013 16:30:05 +0000 Active:1 Finished successfully:64
+Final status: Wed, 25 Sep 2013 16:30:07 +0000 Finished successfully:65
Added: SwiftApps/swift-galaxy/swift/try.xml
===================================================================
--- SwiftApps/swift-galaxy/swift/try.xml (rev 0)
+++ SwiftApps/swift-galaxy/swift/try.xml 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,31 @@
+<tool id="try" name="Try Swift">
+ <description>Try Swift</description>
+
+ <command interpreter="bash">
+ swift-try $site $swiftscript $log_file
+ </command>
+
+ <inputs>
+ <param name="site" type="select" label="Execution Location">
+ <option value="midway">Midway</option>
+ <option value="uc3">UC3</option>
+ <option value="localhost">Localhost</option>
+ <option value="stampede">Stampede</option>
+ </param>
+ <param name="script" type="text" area="True" size="25x25" label="Swift script"/>
+<!--
+ <param name="stochmodel" type="data" label="stochmodel"/>
+ <param name="edrevised" type="data" label="edrevised"/>
+ <param name="asciidata" type="data" label="ascii data "/>
+ <param name="printres" type="data" label="print res inc file"/>
+ <param name="illinois" type="data" label="Illinois data file"/>
+ <param name="wind_data" type="data" label="wind data file"/>
+ -->
+ </inputs>
+
+ <outputs>
+ <data format="txt" type="data" name="log_file"/>
+ </outputs>
+
+</tool>
+
Added: SwiftApps/swift-galaxy/swift/wind_data.dat
===================================================================
--- SwiftApps/swift-galaxy/swift/wind_data.dat (rev 0)
+++ SwiftApps/swift-galaxy/swift/wind_data.dat 2014-01-24 16:34:22 UTC (rev 7507)
@@ -0,0 +1,8761 @@
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Property changes on: SwiftApps/swift-galaxy/swift/wind_data.dat
___________________________________________________________________
Added: svn:executable
+ *
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