[Swift-commit] r6521 - in SwiftApps/magic-square: . bin
davidk at ci.uchicago.edu
davidk at ci.uchicago.edu
Thu May 30 13:15:23 CDT 2013
Author: davidk
Date: 2013-05-30 13:15:23 -0500 (Thu, 30 May 2013)
New Revision: 6521
Added:
SwiftApps/magic-square/bin/
SwiftApps/magic-square/bin/hwsq
SwiftApps/magic-square/bin/readme.txt
SwiftApps/magic-square/bin/run_hwsq.sh
SwiftApps/magic-square/clean.sh
SwiftApps/magic-square/hwsq.m
SwiftApps/magic-square/hwsq.sh
SwiftApps/magic-square/magic-square.swift
SwiftApps/magic-square/myf1.m
SwiftApps/magic-square/sites.xml
SwiftApps/magic-square/tc.data
Log:
Initial commit of magic square (tested running locally on beagle)
Added: SwiftApps/magic-square/bin/hwsq
===================================================================
(Binary files differ)
Property changes on: SwiftApps/magic-square/bin/hwsq
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Added: svn:executable
+ *
Added: svn:mime-type
+ application/octet-stream
Added: SwiftApps/magic-square/bin/readme.txt
===================================================================
--- SwiftApps/magic-square/bin/readme.txt (rev 0)
+++ SwiftApps/magic-square/bin/readme.txt 2013-05-30 18:15:23 UTC (rev 6521)
@@ -0,0 +1,92 @@
+MATLAB Compiler
+
+1. Prerequisites for Deployment
+
+. Verify the MATLAB Compiler Runtime (MCR) is installed and ensure you
+ have installed version 7.16.
+
+. If the MCR is not installed, launch MCRInstaller, located in:
+
+ <matlabroot>*/toolbox/compiler/deploy/glnxa64/MCRInstaller.zip
+
+For more information about the MCR and the MCR Installer, see
+“Working With the MCR” in the MATLAB Compiler User’s Guide.
+
+
+
+2. Files to Deploy and Package
+
+Files to package for Standalone
+================================
+-hwsq
+-run_hwsq.sh (shell script run to temporarily set environment variables and execute the
+ application)
+ -to run the shell script, type
+
+ ./run_hwsq.sh <mcr_directory> <argument_list>
+
+ at Linux or Mac command prompt. <mcr_directory> is the directory
+ where version 7.16 of MCR is installed or the directory where
+ MATLAB is installed on the machine. <argument_list> is all the
+ arguments you want to pass to your application. For example,
+
+ If you have version 7.16 of MCR installed in
+ /mathworks/home/application/R2010a/v716, run the shell script as:
+
+ ./run_hwsq.sh /mathworks/home/application/R2010a/v716
+
+ If you have MATLAB installed in /mathworks/devel/application/matlab,
+ run the shell script as:
+
+ ./run_hwsq.sh /mathworks/devel/application/matlab
+-MCRInstaller.zip
+ -include when building component by clicking "Add MCR" link
+ in deploytool
+-This readme file
+
+3. Definitions
+
+For information on deployment terminology, go to
+http://www.mathworks.com/help. Select your product and see
+the Glossary in the User’s Guide.
+
+
+* NOTE: <matlabroot> is the directory where MATLAB is installed on the target machine.
+
+
+4. Appendix
+
+A. Linux x86-64 systems:
+ On the target machine, add the MCR directory to the environment variable
+ LD_LIBRARY_PATH by issuing the following commands:
+
+ NOTE: <mcr_root> is the directory where MCR is installed
+ on the target machine.
+
+ setenv LD_LIBRARY_PATH
+ $LD_LIBRARY_PATH:
+ <mcr_root>/v716/runtime/glnxa64:
+ <mcr_root>/v716/bin/glnxa64:
+ <mcr_root>/v716/sys/os/glnxa64:
+ <mcr_root>/v716/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:
+ <mcr_root>/v716/sys/java/jre/glnxa64/jre/lib/amd64/server:
+ <mcr_root>/v716/sys/java/jre/glnxa64/jre/lib/amd64
+ setenv XAPPLRESDIR <mcr_root>/v716/X11/app-defaults
+
+
+
+ NOTE: To make these changes persistent after logout on Linux
+ or Mac machines, modify the .cshrc file to include this
+ setenv command.
+ NOTE: The environment variable syntax utilizes forward
+ slashes (/), delimited by colons (:).
+ NOTE: When deploying standalone applications, it is possible
+ to run the shell script file run_hwsq.sh
+ instead of setting environment variables. See
+ section 2 "Files to Deploy and Package".
+
+
+
+
+
+
Added: SwiftApps/magic-square/bin/run_hwsq.sh
===================================================================
--- SwiftApps/magic-square/bin/run_hwsq.sh (rev 0)
+++ SwiftApps/magic-square/bin/run_hwsq.sh 2013-05-30 18:15:23 UTC (rev 6521)
@@ -0,0 +1,39 @@
+#!/bin/sh
+# script for execution of deployed applications
+#
+# Sets up the MCR environment for the current $ARCH and executes
+# the specified command.
+#
+exe_name=$0
+exe_dir=`dirname "$0"`
+echo "------------------------------------------"
+if [ "x$1" = "x" ]; then
+ echo Usage:
+ echo $0 \<deployedMCRroot\> args
+else
+ echo Setting up environment variables
+ MCRROOT="$1"
+ echo ---
+ LD_LIBRARY_PATH=.:${MCRROOT}/runtime/glnxa64 ;
+ LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/bin/glnxa64 ;
+ LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/sys/os/glnxa64;
+ MCRJRE=${MCRROOT}/sys/java/jre/glnxa64/jre/lib/amd64 ;
+ LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/native_threads ;
+ LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/server ;
+ LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/client ;
+ LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE} ;
+ XAPPLRESDIR=${MCRROOT}/X11/app-defaults ;
+ export LD_LIBRARY_PATH;
+ export XAPPLRESDIR;
+ echo LD_LIBRARY_PATH is ${LD_LIBRARY_PATH};
+ shift 1
+ args=
+ while [ $# -gt 0 ]; do
+ token=`echo "$1" | sed 's/ /\\\\ /g'` # Add blackslash before each blank
+ args="${args} ${token}"
+ shift
+ done
+ eval "${exe_dir}"/hwsq $args
+fi
+exit
+
Property changes on: SwiftApps/magic-square/bin/run_hwsq.sh
___________________________________________________________________
Added: svn:executable
+ *
Added: SwiftApps/magic-square/clean.sh
===================================================================
--- SwiftApps/magic-square/clean.sh (rev 0)
+++ SwiftApps/magic-square/clean.sh 2013-05-30 18:15:23 UTC (rev 6521)
@@ -0,0 +1 @@
+rm -rf *.log *.rlog *.d *.kml *.swiftx *.dat
Property changes on: SwiftApps/magic-square/clean.sh
___________________________________________________________________
Added: svn:executable
+ *
Added: SwiftApps/magic-square/hwsq.m
===================================================================
--- SwiftApps/magic-square/hwsq.m (rev 0)
+++ SwiftApps/magic-square/hwsq.m 2013-05-30 18:15:23 UTC (rev 6521)
@@ -0,0 +1,7 @@
+function m = hwsq(infile,outfile,fac)
+n = dlmread(infile)
+if ischar(fac)
+ fac=str2num(fac);
+end
+m = myf1(n,fac)
+dlmwrite(outfile,m)
Added: SwiftApps/magic-square/hwsq.sh
===================================================================
--- SwiftApps/magic-square/hwsq.sh (rev 0)
+++ SwiftApps/magic-square/hwsq.sh 2013-05-30 18:15:23 UTC (rev 6521)
@@ -0,0 +1 @@
+/lustre/beagle/davidk/magic-square/bin/run_hwsq.sh /soft/matlab/7.13 "$@"
Property changes on: SwiftApps/magic-square/hwsq.sh
___________________________________________________________________
Added: svn:executable
+ *
Added: SwiftApps/magic-square/magic-square.swift
===================================================================
--- SwiftApps/magic-square/magic-square.swift (rev 0)
+++ SwiftApps/magic-square/magic-square.swift 2013-05-30 18:15:23 UTC (rev 6521)
@@ -0,0 +1,16 @@
+type file;
+
+app (file outdata) hwsq (file indata, int factor)
+{
+ runhwsq @indata @outdata factor;
+}
+
+file degreeData<"degree.dat">;
+
+int factors[] = [0:9];
+file squareMats[] <simple_mapper; prefix="sqmat.",suffix=".dat">;
+
+foreach f, i in factors {
+ squareMats[i] = hwsq (degreeData, f);
+}
+
Added: SwiftApps/magic-square/myf1.m
===================================================================
--- SwiftApps/magic-square/myf1.m (rev 0)
+++ SwiftApps/magic-square/myf1.m 2013-05-30 18:15:23 UTC (rev 6521)
@@ -0,0 +1,7 @@
+function m = myf1(n,fac)
+
+if ischar(n)
+ n=str2num(n);
+end
+g = magic(n)
+m = g * fac
Added: SwiftApps/magic-square/sites.xml
===================================================================
--- SwiftApps/magic-square/sites.xml (rev 0)
+++ SwiftApps/magic-square/sites.xml 2013-05-30 18:15:23 UTC (rev 6521)
@@ -0,0 +1,9 @@
+<config>
+ <pool handle="localhost">
+ <execution provider="coaster" jobmanager="local:local"/>
+ <profile namespace="karajan" key="jobThrottle">0</profile>
+ <profile namespace="karajan" key="initialScore">10000</profile>
+ <filesystem provider="local"/>
+ <workdirectory>/lustre/beagle/davidk/swiftwork</workdirectory>
+ </pool>
+</config>
Added: SwiftApps/magic-square/tc.data
===================================================================
--- SwiftApps/magic-square/tc.data (rev 0)
+++ SwiftApps/magic-square/tc.data 2013-05-30 18:15:23 UTC (rev 6521)
@@ -0,0 +1 @@
+localhost runhwsq /lustre/beagle/davidk/magic-square/hwsq.sh
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