[Swift-commit] r5878 - SwiftApps/CMTS/rmsd/conf

[davidk at ci.uchicago.edu]

Author: davidk
Date: 2012-07-29 20:25:14 -0500 (Sun, 29 Jul 2012)
New Revision: 5878

Added:
   SwiftApps/CMTS/rmsd/conf/pads-ssh.cf
   SwiftApps/CMTS/rmsd/conf/pads-ssh.xml
Modified:
   SwiftApps/CMTS/rmsd/conf/pads.cf
   SwiftApps/CMTS/rmsd/conf/pads.xml
Log:
Templates for pads


Added: SwiftApps/CMTS/rmsd/conf/pads-ssh.cf
===================================================================
--- SwiftApps/CMTS/rmsd/conf/pads-ssh.cf	                        (rev 0)
+++ SwiftApps/CMTS/rmsd/conf/pads-ssh.cf	2012-07-30 01:25:14 UTC (rev 5878)
@@ -0,0 +1,11 @@
+wrapperlog.always.transfer=true
+sitedir.keep=true
+execution.retries=10
+lazy.errors=false
+status.mode=provider
+use.provider.staging=false
+provider.staging.pin.swiftfiles=false
+use.wrapper.staging=false
+
+#app rmsd=$PWD/../rmsd.sh
+#app plot_pd=$PWD/../plot_pd.pl

Added: SwiftApps/CMTS/rmsd/conf/pads-ssh.xml
===================================================================
--- SwiftApps/CMTS/rmsd/conf/pads-ssh.xml	                        (rev 0)
+++ SwiftApps/CMTS/rmsd/conf/pads-ssh.xml	2012-07-30 01:25:14 UTC (rev 5878)
@@ -0,0 +1,21 @@
+<config>
+<pool handle="makena-ssh">
+  <execution provider="coaster" url="login1.pads.ci.uchicago.edu" jobmanager="ssh-cl:pbs"/>
+  <filesystem provider="local" url="none" />
+  <profile namespace="globus" key="HighOverAllocation">100</profile>
+  <profile namespace="globus" key="LowOverAllocation">100</profile>
+  <profile namespace="globus" key="maxWallTime">00:50:00</profile>
+  <profile namespace="globus" key="maxTime">3600</profile>
+  <profile key="jobsPerNode" namespace="globus">1</profile>
+  <profile key="nodeGranularity" namespace="globus">1</profile>
+  <profile key="maxNodes" namespace="globus">2</profile>
+  <profile key="queue" namespace="globus">fast</profile>
+  <profile key="jobThrottle" namespace="karajan">1.01</profile>
+  <profile key="initialScore" namespace="karajan">10000</profile>
+  <profile key="count" namespace="globus">2</profile>
+  <profile key="jobType" namespace="globus">single</profile>
+  <profile key="ppn" namespace="globus">8</profile>
+  <workdirectory>_WORK_</workdirectory>
+</pool>
+</config>
+

Modified: SwiftApps/CMTS/rmsd/conf/pads.cf
===================================================================
--- SwiftApps/CMTS/rmsd/conf/pads.cf	2012-07-29 18:41:22 UTC (rev 5877)
+++ SwiftApps/CMTS/rmsd/conf/pads.cf	2012-07-30 01:25:14 UTC (rev 5878)
@@ -1,10 +1,11 @@
 wrapperlog.always.transfer=true
 sitedir.keep=true
-execution.retries=3
-lazy.errors=true
+execution.retries=10
+lazy.errors=false
 status.mode=provider
 use.provider.staging=false
 provider.staging.pin.swiftfiles=false
+use.wrapper.staging=false
 
-#app sumloss=$PWD/../sumloss.sh
-#app evolve=$PWD/../evolve.sh
+#app rmsd=$PWD/../rmsd.sh
+#app plot_pd=$PWD/../plot_pd.pl

Modified: SwiftApps/CMTS/rmsd/conf/pads.xml
===================================================================
--- SwiftApps/CMTS/rmsd/conf/pads.xml	2012-07-29 18:41:22 UTC (rev 5877)
+++ SwiftApps/CMTS/rmsd/conf/pads.xml	2012-07-30 01:25:14 UTC (rev 5878)
@@ -1,30 +1,20 @@
 <config>
-  <pool handle="local" >
-    <execution provider="local" url="none" />
-    <profile namespace="karajan" key="jobThrottle">0.09</profile>
-    <profile namespace="karajan" key="initialScore">10000</profile>
-    <filesystem provider="local"/>
-    <workdirectory>_WORK_/local</workdirectory>
-  </pool>
-  <pool handle="pads">
-    <execution provider="coaster" jobmanager="local:pbs" />
-    <filesystem provider="local"/>
-    <workdirectory>_WORK_/pads</workdirectory>
-
-    <profile namespace="globus" key="ppn">8</profile>
-    <profile namespace="globus" key="jobsPerNode">1</profile>
-    <profile namespace="globus" key="lowOverAllocation">100</profile>
-    <profile namespace="globus" key="highOverAllocation">100</profile>
-    <profile namespace="globus" key="maxTime">3600</profile>
-    <profile namespace="globus" key="maxWallTime">00:02:00</profile>
-    <profile namespace="globus" key="slots">192</profile>
-    <profile namespace="globus" key="nodeGranularity">1</profile>
-    <profile namespace="globus" key="maxNodes">1</profile>
-    <profile namespace="globus" key="queue">fast</profile>
-
-    <profile namespace="karajan" key="jobThrottle">0.5</profile>
-    <profile namespace="karajan" key="initialScore">10000</profile>
-
-    <profile namespace="env" key="SWIFT_GEN_SCRIPTS">KEEP</profile>
-  </pool>
+<pool handle="makena">
+  <execution jobmanager="local:pbs" provider="pbs" url="none"/>
+  <filesystem provider="local" url="none" />
+  <profile namespace="globus" key="maxWallTime">01:00:00</profile>
+  <profile namespace="globus" key="maxTime">3600</profile>
+  <profile key="jobsPerNode" namespace="globus">8</profile>
+  <profile key="slots" namespace="globus">1</profile>
+  <profile key="nodeGranularity" namespace="globus">2</profile>
+  <profile key="maxNodes" namespace="globus">1</profile>
+  <profile key="queue" namespace="globus">fast</profile>
+  <profile key="jobThrottle" namespace="karajan">5.99</profile>
+  <profile key="initialScore" namespace="karajan">10000</profile>
+  <profile key="count" namespace="globus">1</profile>
+  <profile key="jobType" namespace="globus">single</profile>
+  <profile key="ppn" namespace="globus">8</profile>
+  <workdirectory>_WORK_</workdirectory>
+</pool>
 </config>
+