[Swift-commit] r5873 - SwiftApps/CMTS/rmsd/conf

davidk at ci.uchicago.edu davidk at ci.uchicago.edu
Fri Jul 27 12:40:54 CDT 2012


Author: davidk
Date: 2012-07-27 12:40:54 -0500 (Fri, 27 Jul 2012)
New Revision: 5873

Added:
   SwiftApps/CMTS/rmsd/conf/grotthuss-ssh.cf
   SwiftApps/CMTS/rmsd/conf/grotthuss-ssh.xml
   SwiftApps/CMTS/rmsd/conf/makena-ssh.cf
   SwiftApps/CMTS/rmsd/conf/makena-ssh.xml
   SwiftApps/CMTS/rmsd/conf/makgroth.cf
   SwiftApps/CMTS/rmsd/conf/makgroth.xml
Log:
Templates for remote runs to makena and grotthuss


Added: SwiftApps/CMTS/rmsd/conf/grotthuss-ssh.cf
===================================================================
--- SwiftApps/CMTS/rmsd/conf/grotthuss-ssh.cf	                        (rev 0)
+++ SwiftApps/CMTS/rmsd/conf/grotthuss-ssh.cf	2012-07-27 17:40:54 UTC (rev 5873)
@@ -0,0 +1,10 @@
+wrapperlog.always.transfer=true
+sitedir.keep=true
+execution.retries=0
+lazy.errors=false
+use.provider.staging=true
+provider.staging.pin.swiftfiles=false
+use.wrapper.staging=false
+tcp.port.range=5000,51000
+
+#app rmsd=$PWD/../rmsd.sh

Added: SwiftApps/CMTS/rmsd/conf/grotthuss-ssh.xml
===================================================================
--- SwiftApps/CMTS/rmsd/conf/grotthuss-ssh.xml	                        (rev 0)
+++ SwiftApps/CMTS/rmsd/conf/grotthuss-ssh.xml	2012-07-27 17:40:54 UTC (rev 5873)
@@ -0,0 +1,20 @@
+<config>
+<pool handle="grotthuss-ssh">
+  <execution provider="coaster" url="grotthuss.uchicago.edu" jobmanager="ssh-cl:pbs"/>
+  <filesystem provider="local" url="none" />
+  <profile namespace="globus" key="HighOverAllocation">100</profile>
+  <profile namespace="globus" key="LowOverAllocation">100</profile>
+  <profile namespace="globus" key="maxWallTime">00:50:00</profile>
+  <profile namespace="globus" key="maxTime">3600</profile>
+  <profile key="jobsPerNode" namespace="globus">1</profile>
+  <profile key="nodeGranularity" namespace="globus">1</profile>
+  <profile key="maxNodes" namespace="globus">2</profile>
+  <profile key="queue" namespace="globus">devel</profile>
+  <profile key="jobThrottle" namespace="karajan">1.01</profile>
+  <profile key="initialScore" namespace="karajan">10000</profile>
+  <profile key="count" namespace="globus">1</profile>
+  <profile key="jobType" namespace="globus">single</profile>
+  <profile key="ppn" namespace="globus">8</profile>
+  <workdirectory>_WORK_</workdirectory>
+</pool>
+</config>

Added: SwiftApps/CMTS/rmsd/conf/makena-ssh.cf
===================================================================
--- SwiftApps/CMTS/rmsd/conf/makena-ssh.cf	                        (rev 0)
+++ SwiftApps/CMTS/rmsd/conf/makena-ssh.cf	2012-07-27 17:40:54 UTC (rev 5873)
@@ -0,0 +1,12 @@
+wrapperlog.always.transfer=true
+sitedir.keep=true
+execution.retries=10
+lazy.errors=false
+use.provider.staging=true
+provider.staging.pin.swiftfiles=false
+use.wrapper.staging=false
+tcp.port.range=5000,51000
+
+#app rmsd=$PWD/../rmsd.sh
+#app cat=/bin/cat
+#app sleep=/bin/sleep

Added: SwiftApps/CMTS/rmsd/conf/makena-ssh.xml
===================================================================
--- SwiftApps/CMTS/rmsd/conf/makena-ssh.xml	                        (rev 0)
+++ SwiftApps/CMTS/rmsd/conf/makena-ssh.xml	2012-07-27 17:40:54 UTC (rev 5873)
@@ -0,0 +1,21 @@
+<config>
+<pool handle="makena-ssh">
+  <execution provider="coaster" url="makena.uchicago.edu" jobmanager="ssh-cl:pbs"/>
+  <filesystem provider="local" url="none" />
+  <profile namespace="globus" key="HighOverAllocation">100</profile>
+  <profile namespace="globus" key="LowOverAllocation">100</profile>
+  <profile namespace="globus" key="maxWallTime">00:50:00</profile>
+  <profile namespace="globus" key="maxTime">3600</profile>
+  <profile key="jobsPerNode" namespace="globus">1</profile>
+  <profile key="nodeGranularity" namespace="globus">1</profile>
+  <profile key="maxNodes" namespace="globus">2</profile>
+  <profile key="queue" namespace="globus">devel</profile>
+  <profile key="jobThrottle" namespace="karajan">1.01</profile>
+  <profile key="initialScore" namespace="karajan">10000</profile>
+  <profile key="count" namespace="globus">2</profile>
+  <profile key="jobType" namespace="globus">single</profile>
+  <profile key="ppn" namespace="globus">8</profile>
+  <workdirectory>/scratch/davidk/work</workdirectory>
+</pool>
+</config>
+

Added: SwiftApps/CMTS/rmsd/conf/makgroth.cf
===================================================================
--- SwiftApps/CMTS/rmsd/conf/makgroth.cf	                        (rev 0)
+++ SwiftApps/CMTS/rmsd/conf/makgroth.cf	2012-07-27 17:40:54 UTC (rev 5873)
@@ -0,0 +1,12 @@
+wrapperlog.always.transfer=true
+sitedir.keep=true
+execution.retries=10
+lazy.errors=false
+use.provider.staging=true
+provider.staging.pin.swiftfiles=false
+use.wrapper.staging=false
+tcp.port.range=5000,51000
+
+#app rmsd=$PWD/../rmsd.sh
+#app cat=/bin/cat
+#app sleep=/bin/sleep

Added: SwiftApps/CMTS/rmsd/conf/makgroth.xml
===================================================================
--- SwiftApps/CMTS/rmsd/conf/makgroth.xml	                        (rev 0)
+++ SwiftApps/CMTS/rmsd/conf/makgroth.xml	2012-07-27 17:40:54 UTC (rev 5873)
@@ -0,0 +1,41 @@
+<config>
+
+<pool handle="makena-ssh">
+  <execution provider="coaster" url="makena.uchicago.edu" jobmanager="ssh-cl:pbs"/>
+  <filesystem provider="local" url="none" />
+  <profile namespace="globus" key="HighOverAllocation">100</profile>
+  <profile namespace="globus" key="LowOverAllocation">100</profile>
+  <profile namespace="globus" key="maxWallTime">00:50:00</profile>
+  <profile namespace="globus" key="maxTime">3600</profile>
+  <profile key="jobsPerNode" namespace="globus">1</profile>
+  <profile key="nodeGranularity" namespace="globus">1</profile>
+  <profile key="maxNodes" namespace="globus">2</profile>
+  <profile key="queue" namespace="globus">devel</profile>
+  <profile key="jobThrottle" namespace="karajan">1.01</profile>
+  <profile key="initialScore" namespace="karajan">10000</profile>
+  <profile key="count" namespace="globus">2</profile>
+  <profile key="jobType" namespace="globus">single</profile>
+  <profile key="ppn" namespace="globus">8</profile>
+  <workdirectory>_WORK_</workdirectory>
+</pool>
+
+<pool handle="grotthuss-ssh">
+  <execution provider="coaster" url="grotthuss.uchicago.edu" jobmanager="ssh-cl:pbs"/>
+  <filesystem provider="local" url="none" />
+  <profile namespace="globus" key="HighOverAllocation">100</profile>
+  <profile namespace="globus" key="LowOverAllocation">100</profile>
+  <profile namespace="globus" key="maxWallTime">00:50:00</profile>
+  <profile namespace="globus" key="maxTime">3600</profile>
+  <profile key="jobsPerNode" namespace="globus">1</profile>
+  <profile key="nodeGranularity" namespace="globus">1</profile>
+  <profile key="maxNodes" namespace="globus">2</profile>
+  <profile key="queue" namespace="globus">devel</profile>
+  <profile key="jobThrottle" namespace="karajan">1.01</profile>
+  <profile key="initialScore" namespace="karajan">10000</profile>
+  <profile key="count" namespace="globus">1</profile>
+  <profile key="jobType" namespace="globus">single</profile>
+  <profile key="ppn" namespace="globus">8</profile>
+  <workdirectory>_WORK_</workdirectory>
+</pool>
+
+</config>




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