[Swift-commit] r3764 - SwiftApps/SwiftR/Swift/man

[noreply at svn.ci.uchicago.edu]

Author: wilde
Date: 2010-12-11 16:24:49 -0600 (Sat, 11 Dec 2010)
New Revision: 3764

Modified:
   SwiftApps/SwiftR/Swift/man/Swift-package.Rd
Log:
Minor doc edits.

Modified: SwiftApps/SwiftR/Swift/man/Swift-package.Rd
===================================================================
--- SwiftApps/SwiftR/Swift/man/Swift-package.Rd	2010-12-10 21:33:04 UTC (rev 3763)
+++ SwiftApps/SwiftR/Swift/man/Swift-package.Rd	2010-12-11 22:24:49 UTC (rev 3764)
@@ -123,13 +123,13 @@
 Download the appropriate Java Runtime (JRE) for Linux at:\verb{
      http://www.java.com/en/download/manual.jsp}
 
-Typically either 32 bit with this link:\verb{
-     Linux (self-extracting file)  filesize: 19.9}
+Typically either 32 bit with the link named:\verb{
+     "Linux (self-extracting file)  filesize: 19.9"}
 
-Or 64 bit with this link\verb{
-	Linux x64 * filesize: 19.3 MB }
+...or 64 bit with the link named: \verb{
+	"Linux x64 (self-extracting file)  filesize: 19.3 MB" }
 
-Its better to install the JDK (~80MB) from:
+Its better to install the full development kit (JDK, ~80MB) from:
 
 	http://www.oracle.com/technetwork/java/javase/downloads/jdk6-jsp-136632.html (JDKs)
 
@@ -141,11 +141,12 @@
 
 Verify that you have Sun Java installed and in your PATH correctly by doing:
 
+\verb{
 $ java -version
 java version "1.6.0_21"
 Java(TM) SE Runtime Environment (build 1.6.0_21-b06)
 Java HotSpot(TM) 64-Bit Server VM (build 17.0-b16, mixed mode)
-$ 
+$ }
 
 2) R v2.11 or higher in your PATH (on client and server machines)
 
@@ -173,13 +174,14 @@
 
 \section{INSTALLATION}{
 
+\preformatted{
 mkdir ~/RPackages ~/RLibrary # if not already created
 cd ~/RPackages
 wget http://www.ci.uchicago.edu/~wilde/Swift_0.1.tar.gz
 R CMS INSTALL -l ~/RLibrary Swift_0.1.tar.gz
 export R_LIBS=~/RLibrary
 
-export GLOBUS_HOSTNAME=10.0.0.200 # Eg for Merlot: internal address of the login node
+export GLOBUS_HOSTNAME=10.0.0.200 # Eg for Merlot: internal address of the login node}
 }
 
 \section{QUICK_START}{
@@ -211,7 +213,7 @@
 its best to set this to /scratch/local, as /tmp is very limited in
 space. Seldom needed.
 
-GLOBUS_HOSTNAME should be set to the IP address of the login host if
+For the pbsf server type only: GLOBUS_HOSTNAME should be set to the IP address of the login host if
 it contains multiple network interfaces (see /sbin/ifconfig) and if
 the worker nodes can only reach the login host on a subset of these
 interfaces.