[Swift-commit] r2955 - SwiftApps/SIDGrid/config

[noreply at svn.ci.uchicago.edu]

Author: skenny
Date: 2009-06-13 18:19:42 -0500 (Sat, 13 Jun 2009)
New Revision: 2955

Modified:
   SwiftApps/SIDGrid/config/tc.data
Log:
paths for running freesurfer on localhost added

Modified: SwiftApps/SIDGrid/config/tc.data
===================================================================
--- SwiftApps/SIDGrid/config/tc.data	2009-06-13 23:02:15 UTC (rev 2954)
+++ SwiftApps/SIDGrid/config/tc.data	2009-06-13 23:19:42 UTC (rev 2955)
@@ -725,7 +725,7 @@
 BSD   R /usr/bin/R  INSTALLED INTEL32::LINUX  env::R_LIBS=/disks/ci-gpfs/fmri/cnari/apps/R_library
 BSD   RInvoke /disks/ci-gpfs/fmri/cnari/scripts/RInvoke.sh  INSTALLED INTEL32::LINUX env::PATHPREFIX=/disks/ci-gpfs/fmri/SIDGrid/usr32/bin
 BSD   Rcmd /disks/ci-gpfs/fmri/cnari/scripts/Rcmd.sh  INSTALLED INTEL32::LINUX env::R_LIBS=/disks/ci-gpfs/fmri/cnari/apps/R_library
-BSD   Mediator /disks/ci-gpfs/fmri/cnari/scripts/Mediator.py INSTALLED INTEL32::LINUX null
+BSD   Mediator /disks/ci-gpfs/fmri/cnari/scripts/Mediator.py INSTALLED INTEL32::LINUX env::PATHPREFIX=/disks/ci-gpfs/fmri/SIDGrid/usr32/bin
 BSD   env /usr/env INSTALLED INTEL32::LINUX null
 BSD      recon1   /disks/ci-gpfs/fmri/cnari/apps/freesurfer/bin/recon1.sh  INSTALLED INTEL32::LINUX  env::FREESURFER_HOME=/disks/ci-gpfs/fmri/cnari/apps/freesurfer
 BSD      recon2L   /disks/ci-gpfs/fmri/cnari/apps/freesurfer/bin/recon2L.sh  INSTALLED INTEL32::LINUX  env::FREESURFER_HOME=/disks/ci-gpfs/fmri/cnari/apps/freesurfer
@@ -2444,8 +2444,13 @@
 BIGRED echo /bin/echo INSTALLED INTEL64::LINUX null
 BIGRED Mediator /N/u/tg-scommun/BigRed/sidgrid/scripts/Mediator.py INSTALLED INTEL64::LINUX GLOBUS::maxwalltime=120;env::PATHPREFIX=/N/u/tg-scommun/BigRed/sidgrid/usr/bin
 
-#----------------------------localhost----------------------
+#----------------------------localhost (will work on all bsd machines)----------------------
 
 localhost   RInvoke   /disks/ci-gpfs/fmri/cnari/scripts/RInvoke.sh INSTALLED INTEL64::LINUX null
 localhost   echo   /bin/echo INSTALLED INTEL64::LINUX null
-localhost   AFNI_3dDeconvolve   /disks/ci-gpfs/fmri/tools/AFNI/linux_gcc32/3dDeconvolve   INSTALLED INTEL32::LINUX null
+localhost   AFNI_3dDeconvolve   /disks/ci-gpfs/fmri/tools/AFNI/linux_gcc32/3dDeconvolve   INSTALLED INTEL64::LINUX null
+localhost      recon1   /disks/ci-gpfs/fmri/cnari/apps/freesurfer/bin/recon1.sh  INSTALLED INTEL64::LINUX  env::FREESURFER_HOME=/disks/ci-gpfs/fmri/cnari/apps/freesurfer
+localhost      recon2L   /disks/ci-gpfs/fmri/cnari/apps/freesurfer/bin/recon2L.sh  INSTALLED INTEL64::LINUX  env::FREESURFER_HOME=/disks/ci-gpfs/fmri/cnari/apps/freesurfer
+localhost      recon2R   /disks/ci-gpfs/fmri/cnari/apps/freesurfer/bin/recon2R.sh  INSTALLED INTEL64::LINUX  env::FREESURFER_HOME=/disks/ci-gpfs/fmri/cnari/apps/freesurfer
+localhost      autorecon2_BOTH   /disks/ci-gpfs/fmri/cnari/apps/freesurfer/bin/autorecon2_BOTH.sh  INSTALLED INTEL64::LINUX  env::FREESURFER_HOME=/disks/ci-gpfs/fmri/cnari/apps/freesurfer
+localhost      reconFINAL   /disks/ci-gpfs/fmri/cnari/apps/freesurfer/bin/reconFINAL.sh  INSTALLED INTEL64::LINUX  env::FREESURFER_HOME=/disks/ci-gpfs/fmri/cnari/apps/freesurfer