[Swift-commit] r3071 - SwiftApps/SIDGrid/swift/projects/andric/ccf_emblem/individual_ss/interpolatedHRFs/scripts

[noreply at svn.ci.uchicago.edu]

Author: andric
Date: 2009-08-06 18:44:32 -0500 (Thu, 06 Aug 2009)
New Revision: 3071

Added:
   SwiftApps/SIDGrid/swift/projects/andric/ccf_emblem/individual_ss/interpolatedHRFs/scripts/paste_dbprep.py
Log:
used to put together ss files for the db

Added: SwiftApps/SIDGrid/swift/projects/andric/ccf_emblem/individual_ss/interpolatedHRFs/scripts/paste_dbprep.py
===================================================================
--- SwiftApps/SIDGrid/swift/projects/andric/ccf_emblem/individual_ss/interpolatedHRFs/scripts/paste_dbprep.py	                        (rev 0)
+++ SwiftApps/SIDGrid/swift/projects/andric/ccf_emblem/individual_ss/interpolatedHRFs/scripts/paste_dbprep.py	2009-08-06 23:44:32 UTC (rev 3071)
@@ -0,0 +1,37 @@
+#!/usr/bin/python
+
+import os
+import shutil
+import commands
+
+
+subjs = [5,6,7,8,10,11,12,13,14,15,17,18,19,20,21,22,23,24,25,26,27,28,30]
+#subjs = [3]
+hemis = ['lh','rh']
+
+ccfInterpDir = os.getenv("cnari")+"/swift/projects/andric/ccf_emblem/individual_ss/interpolatedHRFs/"
+oldCCFDir = os.getenv("cnari")+"/swift/projects/andric/ccf_emblem/individual_ss/IDEALseed/"
+
+seed_vec = "name_vec.txt"
+seed_name = oldCCFDir+seed_vec
+
+print "copying "+seed_name+" to\n"+ccfInterpDir
+shutil.copy2(seed_name,ccfInterpDir)
+
+def paster():
+    ss_dir = ccfInterpDir+"ss"+`ss`+"interp_results/"
+    os.chdir(ss_dir)
+    print os.getcwd()
+    oldSSPath = oldCCFDir+"ss"+`ss`+"_results/"
+    SSVec = "ss_vec"+`ss`+".txt"
+    shutil.copy2(oldSSPath+SSVec,".")
+    ROIVec = "roi_vec_"+h+"_ss"+`ss`+".txt"
+    shutil.copy2(oldSSPath+ROIVec,".")
+    fordb_name = "fordb_ss"+`ss`+"_"+h+".txt"
+    print commands.getoutput("paste -d ' ' "+seed_name+" "+SSVec+" "+ROIVec+" sorted_"+h+"_ccf.txt > "+fordb_name)
+    print "word count for "+fordb_name+" is: "+commands.getoutput("wc "+fordb_name)
+    
+
+for ss in subjs:
+    for h in hemis:
+        paster()