[petsc-users] MatCreateSubMatricesMPI strange behavior
Alexis SALZMAN
alexis.salzman at ec-nantes.fr
Fri Jul 25 04:15:48 CDT 2025
Hi,
As I am relatively new to Petsc, I may have misunderstood how to use the
MatCreateSubMatricesMPI function. The attached code is tuned for three
processes and extracts one matrix for each colour of a subcommunicator
that has been created using the MPI_Comm_split function from an MPIAij
matrix. The following error message appears when the code is set to its
default configuration (i.e. when a rectangular matrix is extracted with
more rows than columns for colour 0):
[0]PETSC ERROR: --------------------- Error Message
--------------------------------------------------------------
[0]PETSC ERROR: Argument out of range
[0]PETSC ERROR: Column too large: col 4 max 3
[0]PETSC ERROR: See https://urldefense.us/v3/__https://petsc.org/release/faq/__;!!G_uCfscf7eWS!ZqH097BZ0G0O3WI7RWrwIKFNpyk0czSWEqfusAeTlgEygAffwpgBUzsLw1TIoGkjZ3mYG-NRQxxFoxU4y8EyY0ofiz9I43Qwe0w$ for trouble shooting.
[0]PETSC ERROR: Petsc Release Version 3.22.2, unknown
... petsc git hash 2a89477b25f compiled on a dell i9 computer with Gcc
14.3, mkl 2025.2, .....
[0]PETSC ERROR: #1 MatSetValues_SeqAIJ() at
...petsc/src/mat/impls/aij/seq/aij.c:426
[0]PETSC ERROR: #2 MatSetValues() at
...petsc/src/mat/interface/matrix.c:1543
[0]PETSC ERROR: #3 MatSetSeqMats_MPIAIJ() at
.../petsc/src/mat/impls/aij/mpi/mpiov.c:2965
[0]PETSC ERROR: #4 MatCreateSubMatricesMPI_MPIXAIJ() at
.../petsc/src/mat/impls/aij/mpi/mpiov.c:3163
[0]PETSC ERROR: #5 MatCreateSubMatricesMPI_MPIAIJ() at
.../petsc/src/mat/impls/aij/mpi/mpiov.c:3196
[0]PETSC ERROR: #6 MatCreateSubMatricesMPI() at
.../petsc/src/mat/interface/matrix.c:7293
[0]PETSC ERROR: #7 main() at sub.c:169
When the '-ok' option is selected, the code extracts a square matrix for
colour 0, which runs smoothly in this case. Selecting the '-trans'
option swaps the row and column selection indices, providing a
transposed submatrix smoothly. For colour 1, which uses only one process
and is therefore sequential, rectangular extraction is OK regardless of
the shape.
Is this dependency on the shape expected? Have I missed an important
tuning step somewhere?
Thank you in advance for any clarification.
Regards
A.S.
P.S.: I'm sorry, but as I'm leaving my office for the following weeks
this evening, I won't be very responsive during this period.
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