[petsc-users] Using PetscPartitioner on WINDOWS

Wed Mar 20 08:29:56 CDT 2024

>>>>
Configure Options: --configModules=PETSc.Configure --optionsModule=config.compilerOptions --with-debugging=0 --with-cc=/cygdrive/g/mypetsc/petsc-3.20.2/lib/petsc/bin/win32fe/win_cl --with-fc=/cygdrive/g/mypetsc/petsc-3.20.2/lib/petsc/bin/win32fe/win_ifort --with-cxx=/cygdrive/g/mypetsc/petsc-3.20.2/lib/petsc/bin/win32fe/win_cl --with-blaslapack-lib=-L/cygdrive/g/Intel/oneAPI/mkl/2023.2.0/lib/intel64 mkl-intel-lp64-dll.lib mkl-sequential-dll.lib mkl-core-dll.lib --with-mpi-include=/cygdrive/g/Intel/oneAPI/mpi/2021.10.0/include --with-mpi-lib=/cygdrive/g/Intel/oneAPI/mpi/2021.10.0/lib/release/impi.lib --with-mpiexec=/cygdrive/g/Intel/oneAPI/mpi/2021.10.0/bin/mpiexec -localonly --download-parmetis=/cygdrive/g/mypetsc/petsc-pkg-parmetis-475d8facbb32.tar.gz --download-metis=/cygdrive/g/mypetsc/petsc-pkg-metis-ca7a59e6283f.tar.gz --with-strict-petscerrorcode=0
<<<

>>>>>>>>
Warning: win32fe: File Not Found: /Ox
Error: win32fe: Input File Not Found: G:\mypetsc\PETSC-~2.2\ARCH-M~1\EXTERN~1\PETSC-~1\PETSC-~1\libmetis\/Ox
>>>>>>>>>>

Looks like you are using an old snapshot of metis. Can you remove your local tarballs - and let [cygwin] git download the appropriate latest version?

Or download and use: https://urldefense.us/v3/__https://bitbucket.org/petsc/pkg-metis/get/8b194fdf09661ac41b36fa16db0474d38f46f1ac.tar.gz__;!!G_uCfscf7eWS!dgDT-Y8-6OviQz8-EOWxbNfMKo9bSBj18tYI-sFf-iCfuyKZ10s6q3DBpWS1Ha51iWExhoSpsV69NQ8uEN5mq_A$ 
Similarly for parmetis https://urldefense.us/v3/__https://bitbucket.org/petsc/pkg-parmetis/get/f5e3aab04fd5fe6e09fa02f885c1c29d349f9f8b.tar.gz__;!!G_uCfscf7eWS!dgDT-Y8-6OviQz8-EOWxbNfMKo9bSBj18tYI-sFf-iCfuyKZ10s6q3DBpWS1Ha51iWExhoSpsV69NQ8uTmPyVKM$ 

Satish

On Wed, 20 Mar 2024, 程奔 wrote:

> Hi I try petsc-3. 20. 2 and petsc-3. 20. 5 with configure ./configure --with-debugging=0 --with-cc=cl --with-fc=ifort --with-cxx=cl --with-blaslapack-lib=-L/cygdrive/g/Intel/oneAPI/mkl/2023. 2. 0/lib/intel64 mkl-intel-lp64-dll. lib
> mkl-sequential-dll. lib
> ZjQcmQRYFpfptBannerStart
> This Message Is From an External Sender
> This message came from outside your organization.
>  
> ZjQcmQRYFpfptBannerEnd
> 
> Hi 
> I try petsc-3.20.2 and petsc-3.20.5 with configure 
> 
> ./configure  --with-debugging=0  --with-cc=cl --with-fc=ifort --with-cxx=cl  
> --with-blaslapack-lib=-L/cygdrive/g/Intel/oneAPI/mkl/2023.2.0/lib/intel64 mkl-intel-lp64-dll.lib mkl-sequential-dll.lib mkl-core-dll.lib 
> --with-mpi-include=/cygdrive/g/Intel/oneAPI/mpi/2021.10.0/include --with-mpi-lib=/cygdrive/g/Intel/oneAPI/mpi/2021.10.0/lib/release/impi.lib 
> --with-mpiexec=/cygdrive/g/Intel/oneAPI/mpi/2021.10.0/bin/mpiexec -localonly 
> --download-parmetis=/cygdrive/g/mypetsc/petsc-pkg-parmetis-475d8facbb32.tar.gz 
> --download-metis=/cygdrive/g/mypetsc/petsc-pkg-metis-ca7a59e6283f.tar.gz 
> --with-strict-petscerrorcode=0
> 
> but it encounter same question,
> 
> *********************************************************************************************
>            UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details):
> ---------------------------------------------------------------------------------------------
>                                  Error running make on  METIS
> *********************************************************************************************
> 
> and I see https://urldefense.us/v3/__https://gitlab.com/petsc/petsc/-/jobs/6412623047__;!!G_uCfscf7eWS!YOO7nEnwU4BJQXD3WkP3QCvaT1gfLxBxnrNdXp9SJbjETmw7uaRKaUkPRPEgWgxibROg8o_rr8SxbnaVWtJbAT-t281f2ha4Aw$ for a successful build of lates
> t petsc-3.20 , it seem have something called "sowing" and "bison" , but I don't have.
> 
> So I ask for your help, and configure.log is attached.
> 
> sinserely,
> Ben.
> 
> > -----原始邮件-----
> > 发件人: "Satish Balay" <balay at mcs.anl.gov>
> > 发送时间:2024-03-20 00:48:57 (星期三)
> > 收件人: "Barry Smith" <bsmith at petsc.dev>
> > 抄送: 程奔 <ctchengben at mail.scut.edu.cn>, PETSc <petsc-users at mcs.anl.gov>
> > 主题: Re: [petsc-users] Using PetscPartitioner on WINDOWS
> > 
> > Check https://urldefense.us/v3/__https://gitlab.com/petsc/petsc/-/jobs/6412623047__;!!G_uCfscf7eWS!YOO7nEnwU4BJQXD3WkP3QCvaT1gfLxBxnrNdXp9SJbjETmw7uaRKaUkPRPEgWgxibROg8o_rr8SxbnaVWtJbAT-t281f2ha4Aw$ for a successful build of latest 
> petsc-3.20 [i.e release branch in git] with metis and parmetis
> > 
> > Note the usage:
> > 
> > >>>>>
> >     '--with-cc=cl',
> >     '--with-cxx=cl',
> >     '--with-fc=ifort',
> > <<<<
> > 
> > Satish
> > 
> > On Tue, 19 Mar 2024, Barry Smith wrote:
> > 
> > > Are you not able to use PETSc 3. 20. 2 ? On Mar 19, 2024, at 5: 27 AM, 程奔 <ctchengben@ mail. scut. edu. cn> wrote: Hi,Barry I try to use PETSc version 3. 19. 5 on windows, but it encounter a problem.
> > > *********************************************************************************************
> > > ZjQcmQRYFpfptBannerStart
> > > This Message Is From an External Sender
> > > This message came from outside your organization.
> > >  
> > > ZjQcmQRYFpfptBannerEnd
> > > 
> > >   Are you not able to use PETSc 3.20.2 ?
> > > 
> > >       On Mar 19, 2024, at 5:27 AM, 程奔 <ctchengben at mail.scut.edu.cn> wrote:
> > > 
> > > Hi,Barry
> > > 
> > > I try to use PETSc version 3.19.5 on windows, but it encounter a problem.
> > > 
> > > 
> > >  *********************************************************************************************
> > >            UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details):
> > > ---------------------------------------------------------------------------------------------
> > >                               Error configuring METIS with CMake
> > > *********************************************************************************************
> > > 
> > > configure.log is attached.
> > > 
> > > 
> > > Looking forward to your reply!
> > > 
> > > sinserely,
> > > 
> > > Ben.
> > > 
> > > 
> > > 
> > >       -----原始邮件-----
> > >       发件人: "Barry Smith" <bsmith at petsc.dev>
> > >       发送时间: 2024-03-18 21:11:14 (星期一)
> > >       收件人: 程奔 <202321009113 at mail.scut.edu.cn>
> > >       抄送: petsc-users at mcs.anl.gov
> > >       主题: Re: [petsc-users] Using PetscPartitioner on WINDOWS
> > > 
> > > 
> > > Please switch to the latest PETSc version, it supports Metis and Parmetis on Windows.
> > >   Barry
> > > 
> > > 
> > >       On Mar 17, 2024, at 11:57 PM, 程奔 <202321009113 at mail.scut.edu.cn> wrote:
> > > 
> > > This Message Is From an External Sender 
> > > This message came from outside your organization.
> > > 
> > > Hello，
> > > 
> > > Recently I try to install PETSc with Cygwin since I'd like to use PETSc with Visual Studio on Windows10 plateform.For the sake of clarity, I firstly list the softwares/packages used below:
> > > 1. PETSc: version 3.16.5
> > > 2. VS: version 2022 
> > > 3. Intel MPI: download Intel oneAPI Base Toolkit and HPC Toolkit
> > > 4. Cygwin
> > > 
> > > 
> > > On windows,
> > > Then I try to calculate a simple cantilever beam  that use Tetrahedral mesh.  So it's  unstructured grid
> > > I use DMPlexCreateFromFile() to creat dmplex.
> > > 
> > > And then I want to distributing the mesh for using  PETSCPARTITIONERPARMETIS type(in my opinion this PetscPartitioner type maybe the best for dmplex,
> > > 
> > > see fig 1 for my work to see different PetscPartitioner type about a  cantilever beam in Linux system.)
> > > 
> > > But unfortunatly, when i try to use parmetis on windows that configure PETSc as follows
> > > 
> > > 
> > >  ./configure  --with-debugging=0  --with-cc='win32fe cl' --with-fc='win32fe ifort' --with-cxx='win32fe cl'  
> > > 
> > > --download-fblaslapack=/cygdrive/g/mypetsc/petsc-pkg-fblaslapack-e8a03f57d64c.tar.gz  --with-shared-libraries=0 
> > > 
> > > --with-mpi-include=/cygdrive/g/Intel/oneAPI/mpi/2021.10.0/include
> > >  --with-mpi-lib=/cygdrive/g/Intel/oneAPI/mpi/2021.10.0/lib/release/impi.lib 
> > > --with-mpiexec=/cygdrive/g/Intel/oneAPI/mpi/2021.10.0/bin/mpiexec 
> > > --download-parmetis=/cygdrive/g/mypetsc/petsc-pkg-parmetis-475d8facbb32.tar.gz 
> > > --download-metis=/cygdrive/g/mypetsc/petsc-pkg-metis-ca7a59e6283f.tar.gz 
> > > 
> > > 
> > > 
> > > 
> > > it shows that 
> > > *******************************************************************************
> > > External package metis does not support --download-metis with Microsoft compilers
> > > *******************************************************************************
> > > configure.log and make.log is attached
> > > 
> > > 
> > > 
> > > If I use PetscPartitioner Simple type the calculate time is much more than PETSCPARTITIONERPARMETIS type.
> > > 
> > > So On windows system I want to use PetscPartitioner like parmetis , if there have any other PetscPartitioner type that can do the same work as parmetis, 
> > > 
> > > or I just try to download parmetis  separatly on windows(like this website , https://urldefense.us/v3/__https://boogie.inm.ras.ru/terekhov/INMOST/-/wikis/0204-Compilation-ParMETIS-Windows__;!!G_uCfscf7eWS!YOO7nEnwU4BJQXD3WkP3QCvaT
> 1gfLxBxnrNdXp9SJbjETmw7uaRKaUkPRPEgWgxibROg8o_rr8SxbnaVWtJbAT-t2815v60Yvg$) 
> > > 
> > > and then use Visual Studio to use it's library I don't know in this way PETSc could use it successfully or not.
> > > 
> > > 
> > > So I wrrit this email to report my problem and ask for your help.
> > > 
> > > Looking forward your reply!
> > > 
> > > 
> > > sinserely,
> > > Ben.
> > > <figure1-Type of  PetscPartitioner.png><configure.log><make.log>
> > > 
> > > 
> > > 
> > > 
> > > 
> 
> 