[petsc-users] Help with compiling PETSc on Summit with gcc 12.1.0
Zhang, Chonglin
chonglin.zhang at und.edu
Fri Feb 9 16:20:55 CST 2024
Thanks Barry! I am still getting the same error message. Any more suggestions?
I can see that library from the login node:
lrwxrwxrwx 1 sauesw ccsstaff 29 Jan 16 16:39 /sw/summit/spack-envs/summit-plus/opt/gcc-12.1.0/spectrum-mpi-10.4.0.6-20230210-db5xakaaqowbhp3nqwebpxrdbwtm4knu/lib/libmpi_ibm_usempif08.so -> libmpi_ibm_usempif08.so.3.1.0
Thanks,
Chonglin
From: Barry Smith <bsmith at petsc.dev>
Date: Friday, February 9, 2024 at 4:10 PM
To: Zhang, Chonglin <chonglin.zhang at und.edu>
Cc: petsc-users at mcs.anl.gov <petsc-users at mcs.anl.gov>
Subject: Re: [petsc-users] Help with compiling PETSc on Summit with gcc 12.1.0
error while loading shared libraries: libmpi_ibm_usempif08.so: cannot open shared object file: No such file or directory
So using the mpif90 does not work because it links a shared library that cannot be found at run time.
Perhaps that library is only visible on the bach nodes. You can tryed adding -with-batch=0 to the ./configure options
Barry
On Feb 9, 2024, at 5:01 PM, Zhang, Chonglin <chonglin.zhang at und.edu> wrote:
Dear PETSc developers,
I am trying to compile PETSc on Summit with gcc 12.1.0 and spectrum-mpi 10.4.0.6, but encountered the following configuration issues:
=============================================================================================
Configuring PETSc to compile on your system
=============================================================================================
TESTING: checkFortranCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:1271) *******************************************************************************
OSError while running ./configure
-------------------------------------------------------------------------------
Cannot run executables created with FC. If this machine uses a batch system
to submit jobs you will need to configure using ./configure with the additional option --with-batch.
Otherwise there is problem with the compilers. Can you compile and run code with your compiler 'mpif90'?
*******************************************************************************
Also attached is the configure.log file. Could you help with this issue?
Thanks,
Chonglin
<configure.log>
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